Pregenerated sensors for ACTG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000184009Ensembl transcript IDs: ENST00000571721.6, ENST00000572105.7, ENST00000574671.6, ENST00000575087.5, ENST00000575842.5, ENST00000575994.6, ENST00000576214.3, ENST00000576544.6, ENST00000679410.1, ENST00000679535.1, ENST00000679778.1, ENST00000680727.1, ENST00000681052.1, ENST00000681842.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACTACCCAATACTTCCAGGTTGGTCTGTCTTTCCCAGCCCACTTaGTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: RLPNTSRLVCLSQPT*YFPKQEPFIGYGST Trigger: AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGGAAAGACAGACCAACCTGGAAGTATTGGGTAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR TCA 90 bp | AATAATGGAAAAAGCCGTCTCAGGACTTCCCTCCCAGCCTGCTTATaGTGTTGCTTCAGTTATCTCCAACACCCAAACCCACTAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NNGKSRLRTSLPACL*CCFSYLQHPNPLGC Trigger: GCAGCCTAGTGGGTTTGGGTGTTGGAGATAACTGAAGCAACATCATAAGCAGGCTGGGAGGGAAGTCCTGAGACGGCTTTTTCCATTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR GCA 90 bp | CTTCAGTTATCTCCAACACCCAAACCCACTAGGCTGCCTTGTTCTTaGACTTTCGATTTGGAAGAAATCGAACTGCTCAGTTTATTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LQLSPTPKPTRLPCS*TFDLEEIELLSLLL Trigger: TAACAATAAACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAGATAACTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR TCA 90 bp | AAACTAAGGCAGGCCCCTGCTGATTCAGGTGGTTATTTTATGCCAAATATTTACCCCACGAAGCCAAGCTaGGCAGCACCCACCGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: KLRQAPADSGGYFMPNIYPTKPS*AAPTAP Trigger: GGGGGCGGTGGGTGCTGCTCAGCTTGGCTTCGTGGG...GTAAATATTTGGCATAAAATAACCACCTGAATCAGCAGGGGCCTGCCTTAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTCTTTCCCAGCCCACTTaGTACTTCCCCAAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QPTCYFPKQEPFIGYGSTLSQPT*YFPKQE Trigger: CTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGGAAAG...AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| 3UTR CAA 90 bp | AAGACTACCCAATACTTCCAGGTTGGTCTGTCTTTCCCAGCCCACTaGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KTTQYFQVGLSFPAH*LLPQTGAIHWLRQH Trigger: GTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGGAAAGACAGACCAACCTGGAAGTATTGGGTAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR CAA 90 bp | TGGAAAAAGCCGTCTCAGGACTTCCCTCCCAGCCTGCTTATGATGTaGCTTCAGTTATCTCCAACACCCAAACCCACTAGGCTGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: WKKPSQDFPPSLLMM*LQLSPTPKPTRLPC Trigger: ACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAGATAACTGAAGCAACATCATAAGCAGGCTGGGAGGGAAGTCCTGAGACGGCTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR TCA 90 bp | TACAAAGGGCACTGGCTGAGCCTCTTACACCAGGTGAGGCCCTCGTTATTGGTAAAGGCAGGCCCCTGCTaGTTCAGGTGGTTATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: YKGHWLSLLHQVRPSLLVKAGPC*FRWLFY Trigger: ATAAAATAACCACCTGAATCAGCAGGGGCCTGCCTT...TACCAATAACGAGGGCCTCACCTGGTGTAAGAGGCTCAGCCAGTGCCCTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR CAA 90 bp | AAAGGGCACTGGCTGAGCCTCTTACACCAGGTGAGGCCCTCGTTATaGGTAGATACTGAGTTCCAGGATTCAGTAACTAGCCAACTCCAT | + |
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Preference number: 2 (lower is better) Translates to: KGHWLSLLHQVRPSL*VDTEFQDSVTSQLH Trigger: ATGGAGTTGGCTAGTTACTGAATCCTGGAACTCAGTATCTACCAATAACGAGGGCCTCACCTGGTGTAAGAGGCTCAGCCAGTGCCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGAGGCCCTCGTTATTGGTAGATACTGAGTTCCAGGATTCAGTAACTAGCCTTTCCCAGCCCACTTaGTACTTCCCCAAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QVRPSLLVDTEFQDSVTSLSQPT*YFPKQE Trigger: CTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGGAAAG...GCTAGTTACTGAATCCTGGAACTCAGTATCTACCAATAACGAGGGCCTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTGCAAGACAAAACAACTaGTTCTTGCCAGCCTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QPTCYFPKQEPFIGYGSTARQNN*FLPASR Trigger: TCTAGAGGCTGGCAAGAACCAGTTGTTTTGTCTTGC...AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTACAGGAGCCATTCATTaGTTACGGCAGCACTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: QPTCYFPKQEPFIGYGSTTGAIH*LRQHFY Trigger: ATAAAAGTGCTGCCGTAACCAATGAATGGCTCCTGT...AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| 3UTR-3UTR CCA 90 bp | GATACTGAGTTCCAGGATTCAGTAACTAGCCAACTCCATGACTGCTGCGCTCTTGCAAGACAAAACAACTaGTTCTTGCCAGCCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: DTEFQDSVTSQLHDCCALARQNN*FLPASR Trigger: TCTAGAGGCTGGCAAGAACCAGTTGTTTTGTCTTGC...AAGAGCGCAGCAGTCATGGAGTTGGCTAGTTACTGAATCCTGGAACTCAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR CAA 90 bp | TGTTCTTGCACTTTCGATTTGGAAGAAATCGAACTGCTCAGTTTATaGTTAAGCCGTTTTCTCACCAGCCCACGAAGCCAAGCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CSCTFDLEEIELLSL*LSRFLTSPRSQAEQ Trigger: CTGCTCAGCTTGGCTTCGTGGGCTGGTGAGAAAACGGCTTAACAATAAACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR CAA 90 bp | CCAACACCCAAACCCACTAGGCTGCCTTGTTCTTGCACTTTCGATTaGGAAGAAATCGAACTGCTCAGTTTATTGTTAAGCCGTTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PTPKPTRLPCSCTFD*EEIELLSLLLSRFL Trigger: GAGAAAACGGCTTAACAATAAACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR CCA 90 bp | AAACTAAGGCAGGCCCCTGCTGATTCAGGTGGTTATTTTATGCCAAATATTTACCCAATACTTCCAGGTTaGTCTGTCTTTCCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: KLRQAPADSGGYFMPNIYPILPG*SVFPSP Trigger: TGGGCTGGGAAAGACAGACCAACCTGGAAGTATTGG...GTAAATATTTGGCATAAAATAACCACCTGAATCAGCAGGGGCCTGCCTTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR CCA 90 bp | AAACTAAGGCAGGCCCCTGCTGATTCAGGTGGTTATTTTATGCCAAATATTTACACAGGAGCCATTCATTaGTTACGGCAGCACTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KLRQAPADSGGYFMPNIYTGAIH*LRQHFY Trigger: ATAAAAGTGCTGCCGTAACCAATGAATGGCTCCTGT...GTAAATATTTGGCATAAAATAACCACCTGAATCAGCAGGGGCCTGCCTTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR CCA 72 bp | CACCTGCGGGGAGAAAAGCTGAAGTACAAAGGGCACTaGCTGAGCCTCTTACACCAGGTGAGGCCCTCGTTA | + |
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Preference number: 3 (lower is better) Translates to: HLRGEKLKYKGH*LSLLHQVRPSL Trigger: TAACGAGGGCCTCACCTGGTGTAAGAGGCTCAGCCAGTGCCCTTTGTACTTCAGCTTTTCTCCCCGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR TCA 72 bp | AAAAGCCGTCTCAGGACTTCCCTCCCAGCCTGCTTATaGTGTTGCTTCAGTTATCTCCAACACCCAAACCCA | + |
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Preference number: 3 (lower is better) Translates to: KSRLRTSLPACL*CCFSYLQHPNP Trigger: TGGGTTTGGGTGTTGGAGATAACTGAAGCAACATCATAAGCAGGCTGGGAGGGAAGTCCTGAGACGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR-3UTR CAA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTAACAGGAGCCATTCATaGGTTACGGCAGCACTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFNRSHS*VTAALL Trigger: TAAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTT...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| 3UTR GCA 72 bp | TCTCCAACACCCAAACCCACTAGGCTGCCTTGTTCTTaGACTTTCGATTTGGAAGAAATCGAACTGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SPTPKPTRLPCS*TFDLEEIELLS Trigger: ACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR GCA 72 bp | TGCTTCAGTTATCTCCAACACCCAAACCCACTAGGCTaGCTTGTTCTTGCACTTTCGATTTGGAAGAAATCG | + |
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Preference number: 3 (lower is better) Translates to: CFSYLQHPNPLG*LVLALSIWKKS Trigger: CGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAGATAACTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR TCA 90 bp | GACCCGCAAGACAAAACAACTGGTTCTTGCCAGCCTGTTCTTACCTTAGCCACGGCTGGCAGCGGCGACTaGGACCGACCGCGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DPQDKTTGSCQPVLTLATAGSGD*DRPRPP Trigger: GGGAGGCCGCGGTCGGTCTCAGTCGCCGCTGCCAGC...CGTGGCTAAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTTGTCTTGCGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681842.1 |
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| CDS-3UTR TCA 90 bp | CCCAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACCCACGAAGCCAAGCTaGGCAGCACCCACCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: PSPLATSPNRSHSLVTAAPTKPS*AAPTAP Trigger: GGGGGCGGTGGGTGCTGCTCAGCTTGGCTTCGTGGG...TGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR TCA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTGCTGGCAGCGGCGACTaGGACCGACCGCGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFAGSGD*DRPRPP Trigger: GGGAGGCCGCGGTCGGTCTCAGTCGCCGCTGCCAGC...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576544.6 |
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| 3UTR CAA 72 bp | CCGCCCCCACCCCCAAGACTACCCAATACTTCCAGGTaGGTCTGTCTTTCCCAGCCCACTTGCTACTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PPPPPRLPNTSR*VCLSQPTCYFP Trigger: GGGGAAGTAGCAAGTGGGCTGGGAAAGACAGACCAACCTGGAAGTATTGGGTAGTCTTGGGGGTGGGGGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR GCA 90 bp | GCAGCACCCACCGCCCCCACCCCCAAGACTACCCAATACTTCCAGGTTGGTCTGAGCCAACTCCATGACTaGTGCGCTCTTTACACAAAG | + |
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Preference number: 4 (lower is better) Translates to: AAPTAPTPKTTQYFQVGLSQLHD*CALYTK Trigger: CTTTGTGTAAAGAGCGCAGCAGTCATGGAGTTGGCT...CAGACCAACCTGGAAGTATTGGGTAGTCTTGGGGGTGGGGGCGGTGGGTGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | GACCCGCAAGACAAAACAACTGGTTCTTGCCAGCCTGTTCTTACCTTAGCCACGACAGAGTGCGAGAGCTaGCAGCGGCGACTGAGACCG | + |
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Preference number: 4 (lower is better) Translates to: DPQDKTTGSCQPVLTLATTECES*QRRLRP Trigger: CGGTCTCAGTCGCCGCTGCCAGCTCTCGCACTCTGT...CGTGGCTAAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTTGTCTTGCGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681842.1 |
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| CDS-3UTR TCA 90 bp | CCACCCCCAAGACTACCCAATACTTCCAGGTTGGTCTGTCTTTCCCAGCCCACTTGCGGGGAGAAAAGCTaGAGTACAAAGGGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: PPPRLPNTSRLVCLSQPTCGEKS*STKGTG Trigger: GCCAGTGCCCTTTGTACTTCAGCTTTTCTCCCCGCA...AGTGGGCTGGGAAAGACAGACCAACCTGGAAGTATTGGGTAGTCTTGGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | GCAGCACCCACCGCCCCCACCCCCAAGACTACCCAATACTTCCAGGTTGGTCTGGCAAGACAAAACAACTaGTTCTTGCCAGCCTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: AAPTAPTPKTTQYFQVGLARQNN*FLPASR Trigger: TCTAGAGGCTGGCAAGAACCAGTTGTTTTGTCTTGC...CAGACCAACCTGGAAGTATTGGGTAGTCTTGGGGGTGGGGGCGGTGGGTGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTACAGAGTGCGAGAGCTaGCAGCGGCGACTGAGACCG | + |
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Preference number: 4 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFTECES*QRRLRP Trigger: CGGTCTCAGTCGCCGCTGCCAGCTCTCGCACTCTGT...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576544.6 |
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| CDS-3UTR CCA 90 bp | CTCCAACACCCAAACCCACTAGGCTGCCTTGTTCTTGCACTTTCGATTTGGAAGACAGAGTGCGAGAGCTaGCAGCGGCGACTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LQHPNPLGCLVLALSIWKTECES*QRRLET Trigger: GGTCTCGAGTCGCCGCTGCCAGCTCTCGCACTCTGT...CTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR GCA 90 bp | CAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTCCAAACCCACTAGGCTaGCTTGTTCTTGCACTTTCG | + |
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Preference number: 4 (lower is better) Translates to: QPTCYFPKQEPFIGYGSTPNPLG*LVLALS Trigger: CGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGG...AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | CAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTCCAATACTTCCAGGTTaGTCTGTCTTTCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QPTCYFPKQEPFIGYGSTPILPG*SVFPSP Trigger: TGGGCTGGGAAAGACAGACCAACCTGGAAGTATTGG...AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR GCA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTCTTTCCCAGCCCACTTaGTACTTCCCCAAACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFLSQPT*YFPKQE Trigger: CTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGGAAAG...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | CCCAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCAACAGGAGCCATTCATTaGTTACGGCAGCACTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: PSPLATSPNRSHSLVTAATGAIH*LRQHFY Trigger: ATAAAAGTGCTGCCGTAACCAATGAATGGCTCCTGT...TGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | AAACTAAGGCAGGCCCCTGCTGATTCAGGTGGTTATTTTATGCCAAATATTTACCGTCCACCTGAGGGCTaGGGGGAAACTAAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KLRQAPADSGGYFMPNIYRPPEG*GETKAG Trigger: GCCTGCCTTAGTTTCCCCCCAGCCCTCAGGTGGACG...GTAAATATTTGGCATAAAATAACCACCTGAATCAGCAGGGGCCTGCCTTAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR TCA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTAAGGCAGGCCCCTGCTaGTTCAGGTGGTTATTTTAT | + |
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Preference number: 4 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFKAGPC*FRWLFY Trigger: ATAAAATAACCACCTGAATCAGCAGGGGCCTGCCTT...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | GACCCGCAAGACAAAACAACTGGTTCTTGCCAGCCTGTTCTTACCTTAGCCACGGCAAGACAAAACAACTaGTTCTTGCCAGCCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DPQDKTTGSCQPVLTLATARQNN*FLPACS Trigger: AGAACAGGCTGGCAAGAACCAGTTGTTTTGTCTTGC...CGTGGCTAAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTTGTCTTGCGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681842.1 |
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| 3UTR CAA 72 bp | CAATACTTCCAGGTTGGTCTGTCTTTCCCAGCCCACTaGCTACTTCCCCAAACAGGAGCCATTCATTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: QYFQVGLSFPAH*LLPQTGAIHWL Trigger: TAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTGGGAAAGACAGACCAACCTGGAAGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTGCAAGACAAAACAACTaGTTCTTGCCAGCCTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFARQNN*FLPASR Trigger: TCTAGAGGCTGGCAAGAACCAGTTGTTTTGTCTTGC...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | TACAAAGGGCACTGGCTGAGCCTCTTACACCAGGTGAGGCCCTCGTTATTGGTACTTGCACTTTCGATTTaGAAGAAATCGAACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YKGHWLSLLHQVRPSLLVLALSI*KKSNCS Trigger: TGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAG...TACCAATAACGAGGGCCTCACCTGGTGTAAGAGGCTCAGCCAGTGCCCTTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CCA 90 bp | ATGATGTTGCTTCAGTTATCTCCAACACCCAAACCCACTAGGCTGCCTTGTTCTAAGTACAAAGGGCACTaGCTGAGCCTCTTACACCAG | + |
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Preference number: 4 (lower is better) Translates to: MMLLQLSPTPKPTRLPCSKYKGH*LSLLHQ Trigger: CTGGTGTAAGAGGCTCAGCCAGTGCCCTTTGTACTT...AGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAGATAACTGAAGCAACATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR GCA 90 bp | GACCCGCAAGACAAAACAACTGGTTCTTGCCAGCCTGTTCTTACCTTAGCCACGAAAACAACTGGTTCTTaGCAGCCTGTTCTTACCTTA | + |
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Preference number: 4 (lower is better) Translates to: DPQDKTTGSCQPVLTLATKTTGS*QPVLTL Trigger: TAAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTT...CGTGGCTAAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTTGTCTTGCGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681842.1 |
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| CDS-3UTR TCA 90 bp | CCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTGTTATTGGTAGATACTaGGTTCCAGGATTCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PTCYFPKQEPFIGYGSTFVIGRY*VPGFSN Trigger: GTTACTGAATCCTGGAACTCAGTATCTACCAATAAC...AAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR TCA 90 bp | TTGGAAGAAATCGAACTGCTCAGTTTATTGTTAAGCCGTTTTCTCACCAGCCCACTCCCAGCCTGCTTATaGTGTTGCTTCAGTTATCTC | + |
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Preference number: 4 (lower is better) Translates to: LEEIELLSLLLSRFLTSPLPACL*CCFSYL Trigger: GAGATAACTGAAGCAACATCATAAGCAGGCTGGGAG...TGGGCTGGTGAGAAAACGGCTTAACAATAAACTGAGCAGTTCGATTTCTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| 3UTR CAA 72 bp | ACTTTCGATTTGGAAGAAATCGAACTGCTCAGTTTATaGTTAAGCCGTTTTCTCACCAGCCCACGAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TFDLEEIELLSL*LSRFLTSPRSQ Trigger: TTGGCTTCGTGGGCTGGTGAGAAAACGGCTTAACAATAAACTGAGCAGTTCGATTTCTTCCAAATCGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR GCA 90 bp | GCTGCCTTGTTCTTGCACTTTCGATTTGGAAGAAATCGAACTGCTCAGTTTATTAGGCTGCCTTGTTCTTaGACTTTCGATTTGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: AALFLHFRFGRNRTAQFIRLPCS*TFDLEE Trigger: TTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCT...AATAAACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS TCA 90 bp | GCTCCTCCGATGCCTGCAGGGAGGGCTGCAGGCACTGCTGGCCTGTaGAAGGCGTGGTCCTCAGCCGCGGGGTGGCCCCAGGGCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: APPMPAGRAAGTAGL*KAWSSAAGWPQGSI Trigger: AATGGAGCCCTGGGGCCACCCCGCGGCTGAGGACCACGCCTTTCACAGGCCAGCAGTGCCTGCAGCCCTCCCTGCAGGCATCGGAGGAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575994.6 |
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| CDS TCA 90 bp | GGGTTGGAGCGCCGGCCGCGTAGGGGTGGCAGTGAGGCCGCGCAGTaGGGGGACGGACTCGCCCGAGGTCGCAGAGCGTTCAGATTGACT | + |
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Preference number: 5 (lower is better) Translates to: GLERRPRRGGSEAAQ*GDGLARGRRAFRLT Trigger: AGTCAATCTGAACGCTCTGCGACCTCGGGCGAGTCCGTCCCCTCACTGCGCGGCCTCACTGCCACCCCTACGCGGCCGGCGCTCCAACCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS TCA 90 bp | GGCGGAGCGGCGGAAGAACAGAGTGCGAGAGCTGGCAGCGGCGACTaGGACCGACCGCGGCCTCCCCCGCCGTTATTTAAGCGGAAGCGG | + |
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Preference number: 5 (lower is better) Translates to: GGAAEEQSARAGSGD*DRPRPPPPLFKRKR Trigger: CCGCTTCCGCTTAAATAACGGCGGGGGAGGCCGCGGTCGGTCTCAGTCGCCGCTGCCAGCTCTCGCACTCTGTTCTTCCGCCGCTCCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000572105.7 ENST00000574671.6 ENST00000576214.3 ENST00000576544.6 ENST00000679410.1 ENST00000679535.1 ENST00000681842.1 |
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| CDS GCA 90 bp | AGTGGCAGCGGTCAGGGCCTGGCACTGAGGTGGGGGCTCCTCCGATaGCTGCAGGGAGGGCTGCAGGCACTGCTGGCCTGTGAAAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SGSGQGLALRWGLLR*LQGGLQALLACERR Trigger: ACGCCTTTCACAGGCCAGCAGTGCCTGCAGCCCTCCCTGCAGGCATCGGAGGAGCCCCCACCTCAGTGCCAGGCCCTGACCGCTGCCACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575994.6 |
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| CDS TCA 90 bp | AGTCCGGGGCCCTGCAACGTTAGCTCGCGACCCCGTGTTTGGGAGTaGCAACAGCGAGTCAGGGCAAGGCGGCCGGCCCAGCTCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: SPGPCNVSSRPRVWE*QQRVRARRPAQLTC Trigger: GCAGGTGAGCTGGGCCGGCCGCCTTGCCCTGACTCGCTGTTGTCACTCCCAAACACGGGGTCGCGAGCTAACGTTGCAGGGCCCCGGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CCA 90 bp | CTTGTCCAGGGCGCTCACTCCTCGCCAGGAGCGGCGCCGGTGCTTTaGTTACACCCCGAGAGGCGCCCGGCACTACGGTTTCCTTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: LVQGAHSSPGAAPVL*LHPERRPALRFPCA Trigger: CGCACAAGGAAACCGTAGTGCCGGGCGCCTCTCGGGGTGTAACCAAAGCACCGGCGCCGCTCCTGGCGAGGAGTGAGCGCCCTGGACAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS GCA 90 bp | ACAGGCTTGTCCAGGGCGCTCACTCCTCGCCAGGAGCGGCGCCGGTaGTTTGGTTACACCCCGAGAGGCGCCCGGCACTACGGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TGLSRALTPRQERRR*FGYTPRGARHYGFL Trigger: AAGGAAACCGTAGTGCCGGGCGCCTCTCGGGGTGTAACCAAAGCACCGGCGCCGCTCCTGGCGAGGAGTGAGCGCCCTGGACAAGCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CCA 90 bp | GCCCGGCACTACGGTTTCCTTGTGCGCTGCTGGAATTTTCAGGGTTaGAGCGCCGGCCGCGTAGGGGTGGCAGTGAGGCCGCGCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ARHYGFLVRCWNFQG*SAGRVGVAVRPRSE Trigger: CTCACTGCGCGGCCTCACTGCCACCCCTACGCGGCCGGCGCTCCAACCCTGAAAATTCCAGCAGCGCACAAGGAAACCGTAGTGCCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CCA 90 bp | CCATTGCGACCTGGGAATCACTGGAGACAGGGATGCCAACAGGAGTaGCAGCGGTCAGGGCCTGGCACTGAGGTGGGGGCTCCTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: PLRPGNHWRQGCQQE*QRSGPGTEVGAPPM Trigger: CATCGGAGGAGCCCCCACCTCAGTGCCAGGCCCTGACCGCTGCCACTCCTGTTGGCATCCCTGTCTCCAGTGATTCCCAGGTCGCAATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575994.6 |
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| CDS CCA 90 bp | TCCATTGCGACCCCAGCGGCCGTGGCCTCCAAGATCGCAACCGCCTaGAACCGAAGGCCGGGCCTTTTACGTAACGTCCACGGCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIATPAAVASKIATA*NRRPGLLRNVHGSE Trigger: TTCCGAGCCGTGGACGTTACGTAAAAGGCCCGGCCTTCGGTTCCAGGCGGTTGCGATCTTGGAGGCCACGGCCGCTGGGGTCGCAATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571721.6 |
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| CDS CCA 90 bp | TACCCTCTTCTGTTTACGATGCTAGTTAAGAGCAGCGATCAGGGCTaGCGTGGGTTTAGCCACAGGCTTGTCCAGGGCGCTCACTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: YPLLFTMLVKSSDQG*RGFSHRLVQGAHSS Trigger: CGAGGAGTGAGCGCCCTGGACAAGCCTGTGGCTAAACCCACGCCAGCCCTGATCGCTGCTCTTAACTAGCATCGTAAACAGAAGAGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CCA 90 bp | AAAGAAACACTTAAATGTCAGAAATCAAGCCGGGCAGAAAATGACTaGGGAAAGGACGGGAGGAGCACGGGCGTCGGCCGAGCCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KETLKCQKSSRAEND*GKDGRSTGVGRASP Trigger: AGGTGAGGCTCGGCCGACGCCCGTGCTCCTCCCGTCCTTTCCCCAGTCATTTTCTGCCCGGCTTGATTTCTGACATTTAAGTGTTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574671.6 |
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| CDS-3UTR CAA 90 bp | GCAGCACCCACCGCCCCCACCCCCAAGACTACCCAATACTTCCAGGTTGGTCTGGAACTGCTCAGTTTATaGTTAAGCCGTTTTCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AAPTAPTPKTTQYFQVGLELLSL*LSRFLT Trigger: GGTGAGAAAACGGCTTAACAATAAACTGAGCAGTTC...CAGACCAACCTGGAAGTATTGGGTAGTCTTGGGGGTGGGGGCGGTGGGTGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CAA 90 bp | TACAAAGGGCACTGGCTGAGCCTCTTACACCAGGTGAGGCCCTCGTTATTGGTAGTGAGGCCCTCGTTATaGGTAGATACTGAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YKGHWLSLLHQVRPSLLVVRPSL*VDTEFQ Trigger: CTGGAACTCAGTATCTACCAATAACGAGGGCCTCAC...TACCAATAACGAGGGCCTCACCTGGTGTAAGAGGCTCAGCCAGTGCCCTTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CAA 90 bp | CAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTAACAGGAGCCATTCATaGGTTACGGCAGCACTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QPTCYFPKQEPFIGYGSTNRSHS*VTAALL Trigger: TAAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTT...AGTGCTGCCGTAACCAATGAATGGCTCCTGTTTGGGGAAGTAGCAAGTGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576544.6 ENST00000681052.1 |
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| CDS TCA 90 bp | AGTGTGATGTGTGGAGAAAAGAAAAGAACGCAGGCAGAAACCAAATaGGAAACCTGGAGGCTTCAGGGAGGAAATGCCGGGAGAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: SVMCGEKKRTQAETK*ETWRLQGGNAGRGT Trigger: TGTTCCTCTCCCGGCATTTCCTCCCTGAAGCCTCCAGGTTTCTCATTTGGTTTCTGCCTGCGTTCTTTTCTTTTCTCCACACATCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000574671.6 ENST00000576214.3 ENST00000679535.1 |
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| CDS-3UTR CAA 90 bp | CTAGGCTGCCTTGTTCTTGCACTTTCGATTTGGAAGAAATCGAACTGCTCAGTTCCCAATACTTCCAGGTaGGTCTGTCTTTCCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGCLVLALSIWKKSNCSVPNTSR*VCLSQP Trigger: GGGCTGGGAAAGACAGACCAACCTGGAAGTATTGGG...AACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CAA 90 bp | GACCCGCAAGACAAAACAACTGGTTCTTGCCAGCCTGTTCTTACCTTAGCCACGCAAAACAACTGGTTCTaGCCAGCCTGTTCTTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: DPQDKTTGSCQPVLTLATQNNWF*PACSYL Trigger: AAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTTG...CGTGGCTAAGGTAAGAACAGGCTGGCAAGAACCAGTTGTTTTGTCTTGCGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681842.1 |
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| CDS-3UTR CAA 90 bp | CTCCAACACCCAAACCCACTAGGCTGCCTTGTTCTTGCACTTTCGATTTGGAAGTCTTGCACTTTCGATTaGGAAGAAATCGAACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQHPNPLGCLVLALSIWKSCTFD*EEIELL Trigger: GAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGA...CTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAGTGGGTTTGGGTGTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS-3UTR CAA 90 bp | CTAGGCTGCCTTGTTCTTGCACTTTCGATTTGGAAGAAATCGAACTGCTCAGTTAACAGGAGCCATTCATaGGTTACGGCAGCACTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGCLVLALSIWKKSNCSVNRSHS*VTAALL Trigger: TAAAAGTGCTGCCGTAACCAATGAATGGCTCCTGTT...AACTGAGCAGTTCGATTTCTTCCAAATCGAAAGTGCAAGAACAAGGCAGCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS TCA 72 bp | CGCCGGCCGCGTAGGGGTGGCAGTGAGGCCGCGCAGTaGGGGGACGGACTCGCCCGAGGTCGCAGAGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: RRPRRGGSEAAQ*GDGLARGRRAF Trigger: GAACGCTCTGCGACCTCGGGCGAGTCCGTCCCCTCACTGCGCGGCCTCACTGCCACCCCTACGCGGCCGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS GCA 72 bp | TCCAGGGCGCTCACTCCTCGCCAGGAGCGGCGCCGGTaGTTTGGTTACACCCCGAGAGGCGCCCGGCACTAC | + |
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Preference number: 6 (lower is better) Translates to: SRALTPRQERRR*FGYTPRGARHY Trigger: GTAGTGCCGGGCGCCTCTCGGGGTGTAACCAAAGCACCGGCGCCGCTCCTGGCGAGGAGTGAGCGCCCTGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CAA 72 bp | GGGCGCTCACTCCTCGCCAGGAGCGGCGCCGGTGCTTaGGTTACACCCCGAGAGGCGCCCGGCACTACGGTT | + |
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Preference number: 6 (lower is better) Translates to: GRSLLARSGAGA*VTPREAPGTTV Trigger: AACCGTAGTGCCGGGCGCCTCTCGGGGTGTAACCAAAGCACCGGCGCCGCTCCTGGCGAGGAGTGAGCGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS GCA 72 bp | AGAGAAACGCGACGGCGGAGCGGCGGAAGAACAGAGTaGGAGAGCTGGCAGCGGCGACTCGAGACCCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RETRRRSGGRTE*ESWQRRLETPG Trigger: CCCGGGGGTCTCGAGTCGCCGCTGCCAGCTCTCGCACTCTGTTCTTCCGCCGCTCCGCCGTCGCGTTTCTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681052.1 |
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| CDS CCA 72 bp | TCCTCCGATGCCTGCAGGGAGGGCTGCAGGCACTGCTaGCCTGTGAAAGGCGTGGTCCTCAGCCGCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSDACREGCRHC*PVKGVVLSRGV Trigger: CACCCCGCGGCTGAGGACCACGCCTTTCACAGGCCAGCAGTGCCTGCAGCCCTCCCTGCAGGCATCGGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575994.6 |
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| CDS CCA 72 bp | GGCGCTCACTCCTCGCCAGGAGCGGCGCCGGTGCTTTaGTTACACCCCGAGAGGCGCCCGGCACTACGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GAHSSPGAAPVL*LHPERRPALRF Trigger: AAACCGTAGTGCCGGGCGCCTCTCGGGGTGTAACCAAAGCACCGGCGCCGCTCCTGGCGAGGAGTGAGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CAA 72 bp | GCAGCGATCAGGGCTGGCGTGGGTTTAGCCACAGGCTaGTCCAGGGCGCTCACTCCTCGCCAGGAGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AAIRAGVGLATG*SRALTPRQERR Trigger: GCGCCGCTCCTGGCGAGGAGTGAGCGCCCTGGACAAGCCTGTGGCTAAACCCACGCCAGCCCTGATCGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CAA 90 bp | GCTTGTCCAGGGCGCTCACTCCTCGCCAGGAGCGGCGCCGGTGCTTaGGTTACACCCCGAGAGGCGCCCGGCACTACGGTTTCCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACPGRSLLARSGAGA*VTPREAPGTTVSLC Trigger: GCACAAGGAAACCGTAGTGCCGGGCGCCTCTCGGGGTGTAACCAAAGCACCGGCGCCGCTCCTGGCGAGGAGTGAGCGCCCTGGACAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CAA 72 bp | TCTCTTCTTCCATTGCGACCCGGCCCACCCCGCCTTTaGTTCCCGGGGAAGGCGCGACGAGGCCTCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLLPLRPGPPRL*FPGKARRGLGS Trigger: GCTGCCGAGGCCTCGTCGCGCCTTCCCCGGGAACAAAAGGCGGGGTGGGCCGGGTCGCAATGGAAGAAGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575087.5 |
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| CDS TCA 72 bp | GCGGAAGAACAGAGTGCGAGAGCTGGCAGCGGCGACTaGGACCGACCGCGGCCTCCCCCGCCGTTATTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: AEEQSARAGSGD*DRPRPPPPLFK Trigger: CTTAAATAACGGCGGGGGAGGCCGCGGTCGGTCTCAGTCGCCGCTGCCAGCTCTCGCACTCTGTTCTTCCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000572105.7 ENST00000574671.6 ENST00000576214.3 ENST00000576544.6 ENST00000679410.1 ENST00000679535.1 ENST00000681842.1 |
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| CDS GCA 72 bp | ACACCCCGAGAGGCGCCCGGCACTACGGTTTCCTTGTaGGCTGCTGGAATTTTCAGGGTTGGAGCGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPREAPGTTVSL*AAGIFRVGAPA Trigger: GGCCGGCGCTCCAACCCTGAAAATTCCAGCAGCGCACAAGGAAACCGTAGTGCCGGGCGCCTCTCGGGGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CCA 72 bp | ACCCCAGCGGCCGTGGCCTCCAAGATCGCAACCGCCTaGAACCGAAGGCCGGGCCTTTTACGTAACGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TPAAVASKIATA*NRRPGLLRNVH Trigger: GTGGACGTTACGTAAAAGGCCCGGCCTTCGGTTCCAGGCGGTTGCGATCTTGGAGGCCACGGCCGCTGGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571721.6 ENST00000575842.5 |
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| CDS CCA 72 bp | CCTGGGAATCACTGGAGACAGGGATGCCAACAGGAGTaGCAGCGGTCAGGGCCTGGCACTGAGGTGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGNHWRQGCQQE*QRSGPGTEVGA Trigger: AGCCCCCACCTCAGTGCCAGGCCCTGACCGCTGCCACTCCTGTTGGCATCCCTGTCTCCAGTGATTCCCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575994.6 |
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| CDS CCA 72 bp | AGAGGCGCCCGGCACTACGGTTTCCTTGTGCGCTGCTaGAATTTTCAGGGTTGGAGCGCCGGCCGCGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGARHYGFLVRC*NFQGWSAGRVG Trigger: CCCTACGCGGCCGGCGCTCCAACCCTGAAAATTCCAGCAGCGCACAAGGAAACCGTAGTGCCGGGCGCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CCA 72 bp | TACGGTTTCCTTGTGCGCTGCTGGAATTTTCAGGGTTaGAGCGCCGGCCGCGTAGGGGTGGCAGTGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: YGFLVRCWNFQG*SAGRVGVAVRP Trigger: CGGCCTCACTGCCACCCCTACGCGGCCGGCGCTCCAACCCTGAAAATTCCAGCAGCGCACAAGGAAACCGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CAA 72 bp | CTACGGTTTCCTTGTGCGCTGCTGGAATTTTCAGGGTaGGAGCGCCGGCCGCGTAGGGGTGGCAGTGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRFPCALLEFSG*ERRPRRGGSEA Trigger: GGCCTCACTGCCACCCCTACGCGGCCGGCGCTCCAACCCTGAAAATTCCAGCAGCGCACAAGGAAACCGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS CAA 72 bp | GTTACACCCCGAGAGGCGCCCGGCACTACGGTTTCCTaGTGCGCTGCTGGAATTTTCAGGGTTGGAGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VTPREAPGTTVS*CAAGIFRVGAP Trigger: CGGCGCTCCAACCCTGAAAATTCCAGCAGCGCACAAGGAAACCGTAGTGCCGGGCGCCTCTCGGGGTGTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS GCA 72 bp | CTTCCATTGCGACCTGGGAATCACTGGAGACAGGGATaGCAACAGGAGTGGCAGCGGTCAGGGCCTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LPLRPGNHWRQG*QQEWQRSGPGT Trigger: AGTGCCAGGCCCTGACCGCTGCCACTCCTGTTGGCATCCCTGTCTCCAGTGATTCCCAGGTCGCAATGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575994.6 |
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| CDS CCA 72 bp | GATCTCTTCTTCCATTGCGACCTGCCCGGAAAAGGATaGACTCAGGCGGGCGCGTCTGTAACACGGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DLFFHCDLPGKG*TQAGASVTRSP Trigger: AGGGGACCGTGTTACAGACGCGCCCGCCTGAGTCCATCCTTTTCCGGGCAGGTCGCAATGGAAGAAGAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000575842.5 ENST00000680727.1 |
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| CDS CCA 72 bp | CTTAAATGTCAGAAATCAAGCCGGGCAGAAAATGACTaGGGAAAGGACGGGAGGAGCACGGGCGTCGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LKCQKSSRAEND*GKDGRSTGVGR Trigger: TCGGCCGACGCCCGTGCTCCTCCCGTCCTTTCCCCAGTCATTTTCTGCCCGGCTTGATTTCTGACATTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574671.6 |
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| CDS CCA 72 bp | CTGTTTACGATGCTAGTTAAGAGCAGCGATCAGGGCTaGCGTGGGTTTAGCCACAGGCTTGTCCAGGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LFTMLVKSSDQG*RGFSHRLVQGA Trigger: AGCGCCCTGGACAAGCCTGTGGCTAAACCCACGCCAGCCCTGATCGCTGCTCTTAACTAGCATCGTAAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679778.1 |
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| CDS GCA 72 bp | AACCAAATGAGAAACCTGGAGGCTTCAGGGAGGAAATaGCGGGAGAGGAACAGAGCCTGGAACAGCGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NQMRNLEASGRK*RERNRAWNSER Trigger: TCTTTCGCTGTTCCAGGCTCTGTTCCTCTCCCGGCATTTCCTCCCTGAAGCCTCCAGGTTTCTCATTTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574671.6 |
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