RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACCS (Homo sapiens)

Ensembl gene IDs: ENSG00000110455

Ensembl transcript IDs: ENST00000263776.9, ENST00000524990.5, ENST00000526577.5, ENST00000527346.5, ENST00000527557.5, ENST00000527603.5, ENST00000531190.5, ENST00000531505.1, ENST00000531940.1, ENST00000532122.5, ENST00000533208.5, ENST00000533404.1, ENST00000534035.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATaGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAACGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: TVLQAQSQVRYLPGK*HIHSQSSAAPERPR
Trigger: CCTGGGGCGTTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR TCA 90 bp TACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTaGCAAAGAAAGAGGAATGACGGTGATATCAGAAAGAAGGTACAA +
Preference number: 1 (lower is better)
Translates to: YKLSCMCCSFDSFPW*QRKRNDGDIRKKVQ
Trigger: TTGTACCTTCTTTCTGATATCACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAGGCTGCTGGGCCCTCTaGCCACGAGACAATGACCAG +
Preference number: 2 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKGCWAL*PRDNDQ
Trigger: CTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCC...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR-3UTR GCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAACAGGTCCACAGTGGCTaGTGGGCCCTCTGGCCACGA +
Preference number: 2 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKQVHSG*WALWPR
Trigger: TCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTG...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR-3UTR CCA 90 bp GTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGATATCATACCTTCCTGGCAAATaGCACATCCACAGTCAGTCT +
Preference number: 2 (lower is better)
Translates to: VPLTRFLGDKERGMTVISYLPGK*HIHSQS
Trigger: AGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTA...TGATATCACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR-3UTR CCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGCACAATGGAGACATATaGACTCTCCTAGTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVHNGDI*TLLVLF
Trigger: AAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR-3UTR CCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAACTAAATAACTCACAATaGAGACATATGGACTCTCCT +
Preference number: 2 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKLNNSQ*RHMDSP
Trigger: AGGAGAGTCCATATGTCTCCATTGTGAGTTATTTAG...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR CCA 72 bp CAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATaGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: QAQSQVRYLPGK*HIHSQSSAAPE
Trigger: TTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR TCA 72 bp TCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTaGCAAAGAAAGAGGAATGACGGTGATATCAGAAAG +
Preference number: 3 (lower is better)
Translates to: SCMCCSFDSFPW*QRKRNDGDIRK
Trigger: CTTTCTGATATCACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR-3UTR CAA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGGAAGGTACAAGTTGTTaGTTTTCTTTTCACATCCTC +
Preference number: 3 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVEGTSC*FSFHIL
Trigger: GAGGATGTGAAAAGAAAACAAACAACTTGTACCTTC...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTCCTCACACAGCACCGTaGCCAGAGCAGAGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSPHTAP*PEQRRA
Trigger: CGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGG...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTCCTGCGTTGGTCACTTaGCTCCTGGCTCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSPALVT*LLALRG
Trigger: CCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGG...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTTCAAGTCAACCCAGATaGAGAAGCCAGCCCCACGAC +
Preference number: 4 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSSSQPR*RSQPHD
Trigger: GTCGTGGGGCTGGCTTCTTCATCTGGGTTGACTTGA...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTCACTTGGGATTTGCCTaGAAGCACCTGCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSHLGFA*KHLLDP
Trigger: AGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTG...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTCTGCCACTTGGGATTTaGCTGCAAGCACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSLPLGI*LQAPAG
Trigger: TCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAG...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTCCTCAAAGGTGCCCTTaGGCAGGTACTTTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSPQRCP*AGTFSS
Trigger: ACTTGAGAAAGTACCTGCCCAAGGGCACCTTTGAGG...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp GATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAACGCACAGAGGGAGGCCTaGACGGCTTCCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DTFLANGTSTVSLLQPQNAQREA*TASSSA
Trigger: TGCAGAGGAGGAAGCCGTTCAGGCCTCCCTCTGTGC...GTTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAACCCTGCAAGCACCTGCTaGACCCTCTGCATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTFLANGTSTVSLLQPQNPASTC*TLCIPR
Trigger: CCTGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGG...GTTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp AGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAACTACTGCCCAGGTCCTaGATGCAGGTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RYLPGKWHIHSQSSAAPELLPRS*MQVGPR
Trigger: TCTGGGCCCCACCTGCATGCAGGACCTGGGCAGTAG...TTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp AGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTGGAAGGGCAGCACAGTaGGCGGAAGCCGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RHKAKLDTFLANGTSTVSGRAAQ*AEAGVG
Trigger: TCCCACCCCGGCTTCCGCCCACTGTGCTGCCCTTCC...ACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCCTCTGCATGTCGCGCTaGCTCAGCCGCCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSLCMSR*LSRQDS
Trigger: GCTGTCCTGGCGGCTGAGTCAGCGCGACATGCAGAG...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCCAGGTCCACAGTGGCTaGTGGGCCCTCTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSQVHSG*WALWPR
Trigger: TCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTG...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAACCTACTTGGCGGAGCTaGAGGAGGCGGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKPTWRS*RRRCWH
Trigger: GTGCCAGCACCGCCTCCTCCAGCTCCGCCAAGTAGG...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAGCTGGAGGAGGCGGTaGTGGCACTCGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDSWRRR*WHSVGA
Trigger: GGCGCCCACCGAGTGCCAGCACCGCCTCCTCCAGCT...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCCTTGGCTCCTGGCTCTaGGAGGGACGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPLGSWL*EGRGSS
Trigger: AGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAG...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCCTGGCCACGAGACAATaGCCAGCTCACCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSLATRQ*PAHLRW
Trigger: CCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAG...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAACTTCCCCATGGCTACTaGCCAGGTCCTGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKLPHGY*PGPACR
Trigger: CCTGCATGCAGGACCTGGGCAGTAGCCATGGGGAAG...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCTTGCCTGCAAGCACCTaGTGGACCCTCTGCATCCCC +
Preference number: 4 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSLPAST*WTLCIP
Trigger: GGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAA...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGATATCATGGAGGAGGCGGTGCTaGCACTCGGTGGGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: VPLTRFLGDKERGMTVISWRRRC*HSVGAH
Trigger: ATGGGCGCCCACCGAGTGCCAGCACCGCCTCCTCCA...TGATATCACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCTTGGAATCCCGCAAGTaGGGCGGCTACCGCGCACGA +
Preference number: 4 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPLESRK*GGYRAR
Trigger: TCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAA...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAGTTGCCCACATCACATaGGTCCTCTGGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKVAHIT*VLWGSG
Trigger: CCCTGACCCCCAGAGGACCCATGTGATGTGGGCAAC...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GAGGCTCTGGTTAGAAGCAGTCACGACTCCTCCATTCTAAATAACTCACAATGGGGCTGCTGGGCCCTCTaGCCACGAGACAATGACCAG +
Preference number: 4 (lower is better)
Translates to: EALVRSSHDSSILNNSQWGCWAL*PRDNDQ
Trigger: CTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCC...CCATTGTGAGTTATTTAGAATGGAGGAGTCGTGACTGCTTCTAACCAGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAGATACCCGCACTCGATaGGGCCTTGGAATCCCGCAA +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKDTRTR*GLGIPQ
Trigger: TTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATC...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGACTGGACCAAGCCACTaGGGCCGTGGTAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGTGPSH*GRGSGR
Trigger: TCTGCCGCTACCACGGCCTCAGTGGCTTGGTCCAGT...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGGCAGGTACACCTGGTTaGTCCAGTCACGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVAGTPG*SSHGPG
Trigger: TCCGGGACCGTGACTGGATCAACCAGGTGTACCTGC...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp AGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAAAAGGGCAGAGGCTTTTaGAAAGTGCACAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RYLPGKWHIHSQSSAAPEKGRGF*KVHRGR
Trigger: CCTCCCTCTGTGCACTTTGCAAAAGCCTCTGCCCTT...TTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp AGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAATACACTCGAAGGCCTTaGCAAAGGACAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RYLPGKWHIHSQSSAAPEYTRRP*QRTAAP
Trigger: AGGTGCTGCTGTCCTTTGGCAAGGCCTTCGAGTGTA...TTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGACCTGCTGGACCCTCTaGATCCCCAGGCAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGTCWTL*IPRQSR
Trigger: CCGGCTTTGCCTGGGGATGCAGAGGGTCCAGCAGGT...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGATATCAGGTCCTGCATGCAGGTaGGGCCCAGACAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VPLTRFLGDKERGMTVISGPACR*GPDRWW
Trigger: CCACCACCTGTCTGGGCCCCACCTGCATGCAGGACC...TGATATCACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAATCCAGATCTTCCCCATaGCTACTGCCCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKSRSSP*LLPRSC
Trigger: GCAGGACCTGGGCAGTAGCCATGGGGAAGATCTGGA...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGGCCTTGAGCCGGGCATaGTTTTCCGGCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVALSRA*FSGRYT
Trigger: GGTGTACCTGCCGGAAAACCATGCCCGGCTCAAGGC...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAATTCACACCCTCAGAGTaGGCTTCTCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKFTPSE*ASLRAI
Trigger: GATGGCCCTGAGAGAAGCTCACTCTGAGGGTGTGAA...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGGGGACGGGGGTCTTCTaGCACTTGGGATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGGTGVF*HLGFAC
Trigger: GCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCC...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCACTCGATGAGGCCTTaGAATCCCGCAAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGHSMRP*NPASGA
Trigger: CGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTG...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAATACTGCAGCAGGGATaGCTCCACCCTCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKILQQG*LHPLHV
Trigger: GACATGCAGAGGGTGGAGCCATCCCTGCTGCAGTAT...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GAGGCTCTGGTTAGAAGCAGTCACGACTCCTCCATTCTAAATAACTCACAATGGCGCCATAGTAAGGGGTaGGGATCAGGAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EALVRSSHDSSILNNSQWRHSKG*GSGKPP
Trigger: GGGAGGCTTTCCTGATCCCCACCCCTTACTATGGCG...CCATTGTGAGTTATTTAGAATGGAGGAGTCGTGACTGCTTCTAACCAGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGCCCAGGCAAAGCCGGTaGACCTGGTCTGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVPRQSR*TWSEKT
Trigger: TGTCTTCTCAGACCAGGTCCACCGGCTTTGCCTGGG...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGCCAGCTCACCTGCGTTaGTCACTTGGCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VCAVPLTRFLGDKERGMTPAHLR*SLGSWL
Trigger: GAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGG...CGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp AGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTGCCCTGAAGTCCTTTTaGGGAAGGGTGAACATCTCC +
Preference number: 4 (lower is better)
Translates to: RHKAKLDTFLANGTSTVSALKSF*GRVNIS
Trigger: GGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGC...ACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGCCGGTGGACCTGGTCTaGGAAGACAAAGCGAAACCA +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVPVDLV*EDKAKP
Trigger: TGGTTTCGCTTTGTCTTCTCAGACCAGGTCCACCGG...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGAGGCCAGCCGGATGTTaGCATAGAGACACACGTGCT +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVRPAGC*HRDTRA
Trigger: AGCACGTGTGTCTCTATGGCAACATCCGGCTGGCCT...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAATTTCTGTGTACAGCGTaGCAAAGCGGAGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKFLCTA*QSGAQT
Trigger: TGTCTGGGCTCCGCTTTGGCACGCTGTACACAGAAA...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp AGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTAGAAAGACAGGAACTTaGCCACTTCCTCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: RHKAKLDTFLANGTSTVSRKTGT*PLPPGG
Trigger: TCCTCCGGGAGGAAGTGGCCAAGTTCCTGTCTTTCT...ACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAGCAGCCTGTGCCTCTTaGCAAATACCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKAACAS*QIPGTP
Trigger: AGGAGTACCTGGTATTTGCCAAGAGGCACAGGCTGC...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GAGGCTCTGGTTAGAAGCAGTCACGACTCCTCCATTCTAAATAACTCACAATGGTCCCGAAGTCCTTGCTaGTTGCCCACATCACATGGG +
Preference number: 4 (lower is better)
Translates to: EALVRSSHDSSILNNSQWSRSPC*LPTSHG
Trigger: CCCATGTGATGTGGGCAACCAGCAAGGACTTCGGGA...CCATTGTGAGTTATTTAGAATGGAGGAGTCGTGACTGCTTCTAACCAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAGCAGTGGCCACATCCTaGTTTTCTGTGTACAGCGTG +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKAVATS*FSVYSV
Trigger: CACGCTGTACACAGAAAACCAGGATGTGGCCACTGC...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGTGTGCCATCTGGTACTaGACCAAGCCACTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VCAVPLTRFLGDKERGMTCAIWY*TKPLRP
Trigger: CGGCCTCAGTGGCTTGGTCCAGTACCAGATGGCACA...CGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp AGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCAAAGCCGGTGGACCTaGTCTGAGAAGACAAAGCGA +
Preference number: 4 (lower is better)
Translates to: RHKAKLDTFLANGTSTVSQSRWT*SEKTKR
Trigger: TCGCTTTGTCTTCTCAGACCAGGTCCACCGGCTTTG...ACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCTTTTGAGGAAGGGTaGACATCTCCAGCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGPFEEG*TSPALP
Trigger: CGGGAGAGCTGGAGATGTTCACCCTTCCTCAAAAGG...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAGGTGGTGGGAGCCCTaGAGTCCTTTTGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDRWWEP*SPFEEG
Trigger: CCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCT...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAACCACATTCTCTGGTCTaGGGGGTACTGGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKPHSLV*GVLGSC
Trigger: GCAAGAGCCCAGTACCCCTCAGACCAGAGAATGTGG...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp AGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCACAGTCAGTTCATCCACAATCACATaGAGCCTGTGCCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RHKAKLDTFLANGTSTVSSSTIT*SLCLLA
Trigger: TGCCAAGAGGCACAGGCTGCATGTGATTGTGGATGA...ACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAATTTCCTCCTCAAAGGTaGCCTTGGGCAGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKFPPQR*PWAGTF
Trigger: GAAAGTACCTGCCCAAGGGCACCTTTGAGGAGGAAA...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCAATGACCAGCTCACCTaGGTTGGTCACTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPNDQLT*VGHLAP
Trigger: AGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATT...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCACTCCACGGAGCTCTaGCAGCTTCTGGTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGHSTEL*QLLVQF
Trigger: AAACTGGACCAGAAGCTGCCAGAGCTCCGTGGAGTG...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGTTCTCCACTGTGAGCTaGAAGGGGCGTGTGTCTAGC +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGFSTVS*KGRVSS
Trigger: GCTAGACACACGCCCCTTCCAGCTCACAGTGGAGAA...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACGGGAAGCCACGGCAGTaGCCACATCCTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDGKPRQ*PHPGFL
Trigger: CAGAAAACCAGGATGTGGCCACTGCCGTGGCTTCCC...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCGTAGCCCTCCTCAGCTaGATCCCAGAACCATTTAAT +
Preference number: 4 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSVALLS*IPEPFN
Trigger: ATTAAATGGTTCTGGGATTCAGCTGAGGAGGGCTAC...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAATGCCCTAAGCTCTTCTaGGACATAGGTGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKCPKLF*DIGVGS
Trigger: GCTGCCCACACCTATGTCTCAGAAGAGCTTAGGGCA...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCAGGCTTAGGACACTaGGGTACCCAACAGACTTCT +
Preference number: 4 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGPGLGH*GTQQTS
Trigger: AGAAGTCTGTTGGGTACCGCAGTGTCCTAAGCCTGG...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCACATCCCGAAGTCCTTaGTGGTTGCCCACATCACAT +
Preference number: 4 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPTSRSP*WLPTSH
Trigger: ATGTGATGTGGGCAACCAGCAAGGACTTCGGGATGT...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GACAAAGAAAGAGGAATGACGGTGATATCAGAAAGAAGGTACAAGTTGTTTGTTTGGATCCCACCTACTTaGCGGAGCTGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DKERGMTVISERRYKLFVWIPPT*RSWRRR
Trigger: CCGCCTCCTCCAGCTCCGCCAAGTAGGTGGGATCCA...AACAAACAACTTGTACCTTCTTTCTGATATCACCGTCATTCCTCTTTCTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCTATCAGAGGAGATCATaGCAGGATCACCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPYQRRS*QDHPLH
Trigger: GTGGAGTGGGTGATCCTGCCATGATCTCCTCTGATA...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGTGGTCTGAGGGGTACTaGGCTCTTGCAGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVWSEGY*ALAVER
Trigger: TCTTTCTACTGCAAGAGCCCAGTACCCCTCAGACCA...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAAGCAGCTGTGCCATCTaGTACTGGACCAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKSSCAI*YWTKPL
Trigger: CAGTGGCTTGGTCCAGTACCAGATGGCACAGCTGCT...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACGGGTCTTCTGCCACTTaGGATTTGCCTGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDGSSAT*DLPAST
Trigger: GGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCC...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp GTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGGGGTACTGGGCTCTTaGAGTAGAAAGACAGGAACT +
Preference number: 4 (lower is better)
Translates to: VCAVPLTRFLGDKERGMTGVLGS*SRKTGT
Trigger: AGTTCCTGTCTTTCTACTGCAAGAGCCCAGTACCCC...CGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAACCAAGGGATTCGAGATaGAAGGGCAGAGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKPRDSR*KGRGFC
Trigger: GCAAAAGCCTCTGCCCTTCCATCTCGAATCCCTTGG...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACGACAACCACATTCTCTaGTCTGAGGGGTACTGGGCT +
Preference number: 4 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDDNHIL*SEGYWA
Trigger: AGCCCAGTACCCCTCAGACCAGAGAATGTGGTTGTC...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCTACCTTCCTGGCAAATaGCACATCCACAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPYLPGK*HIHSQS
Trigger: AGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTA...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGGACTCGTTTCCTTGGTaGCAAAGAAAGAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVDSFPW*QRKRND
Trigger: GTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTC...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGTATGTGCTGTTCCTTTaGCTCGTTTCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVYVLFL*LVSLVT
Trigger: TGTCACCAAGGAAACGAGTCAAAGGAACAGCACATA...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR GCA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAATCACATGCAGCCTGTaGCTCTTGGCAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKITCSL*LLANTR
Trigger: CCTGGTATTTGCCAAGAGGCACAGGCTGCATGTGAT...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp GACAAAGAAAGAGGAATGACGGTGATATCAGAAAGAAGGTACAAGTTGTTTGTTTCCGGCAGGTACACCTaGTTGATCCAGTCACGGTCC +
Preference number: 4 (lower is better)
Translates to: DKERGMTVISERRYKLFVSGRYT*LIQSRS
Trigger: GGACCGTGACTGGATCAACCAGGTGTACCTGCCGGA...AACAAACAACTTGTACCTTCTTTCTGATATCACCGTCATTCCTCTTTCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR TCA 90 bp GACAAAGAAAGAGGAATGACGGTGATATCAGAAAGAAGGTACAAGTTGTTTGTTGTGTGTCTAGCCCAGTaGCCTCACTGTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: DKERGMTVISERRYKLFVVCLAQ*PHCPGR
Trigger: TCTACCTGGACAGTGAGGTCACTGGGCTAGACACAC...AACAAACAACTTGTACCTTCTTTCTGATATCACCGTCATTCCTCTTTCTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CCA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCCTAAATAACTCACAATaGAGACATATGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSLNNSQ*RHMDSP
Trigger: AGGAGAGTCCATATGTCTCCATTGTGAGTTATTTAG...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
3UTR CAA 72 bp TATTTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTaGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: YFSTNSPVCAVP*TRFLGDKERGM
Trigger: CATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS TCA 90 bp TCCAGCAGGACGGCGGCGAATCCACAGCCAGATACCCGCACTCGATaGGGCCTTGGAATCCCGCAAGTGGGGCGGCTACCGCGCACGAAG +
Preference number: 5 (lower is better)
Translates to: SSRTAANPQPDTRTR*GLGIPQVGRLPRTK
Trigger: CTTCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTGGATTCGCCGCCGTCCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS TCA 90 bp CACGGTCCCGGAGCAGCTGTGCCATCTGGTACTGGACCAAGCCACTaGGGCCGTGGTAGCGGCAGAGGGAAGCCACGGCAGTGGCCACAT +
Preference number: 5 (lower is better)
Translates to: HGPGAAVPSGTGPSH*GRGSGRGKPRQWPH
Trigger: ATGTGGCCACTGCCGTGGCTTCCCTCTGCCGCTACCACGGCCTCAGTGGCTTGGTCCAGTACCAGATGGCACAGCTGCTCCGGGACCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000527557.5
ENST00000531190.5
ENST00000531505.1
ENST00000532122.5
ENST00000534035.1
CDS CCA 90 bp TGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTaGCCACGAGACAATGACCAGCTCACCTGCGTTGGTCACTTGGCT +
Preference number: 5 (lower is better)
Translates to: CSPRTPQVHSGCWAL*PRDNDQLTCVGHLA
Trigger: AGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS TCA 90 bp TCAGCATACTGCAGCAGGGATGGCTCCACCCTCTGCATGTCGCGCTaGCTCAGCTGGGGACAGAGAGGGAAGAGCACGGCTGAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SAYCSRDGSTLCMSR*LSWGQRGKSTAEGQ
Trigger: CTGGCCCTCAGCCGTGCTCTTCCCTCTCTGTCCCCAGCTGAGTCAGCGCGACATGCAGAGGGTGGAGCCATCCCTGCTGCAGTATGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS GCA 90 bp CTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGATTTGCCTaGAAGCACCTGCTGGACCCTCTGCATCCCCAGGCAAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LALRGTGVFCHLGFA*KHLLDPLHPQAKPV
Trigger: CACCGGCTTTGCCTGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS GCA 90 bp GCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGATTTaGCTGCAAGCACCTGCTGGACCCTCTGCATCCCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: APGSERDGGLLPLGI*LQAPAGPSASPGKA
Trigger: GGCTTTGCCTGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS GCA 90 bp AGTGGCTGCTGGGCCCTCTGGCCACGAGACAATGACCAGCTCACCTaGGTTGGTCACTTGGCTCCTGGCTCTGAGAGGGACGGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: SGCWALWPRDNDQLT*VGHLAPGSERDGGL
Trigger: AAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS GCA 90 bp CAGTCAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTaGTGGGCCCTCTGGCCACGAGACAATGACCAGCTCACCTGCGTT +
Preference number: 5 (lower is better)
Translates to: QSVFCSPRTPQVHSG*WALWPRDNDQLTCV
Trigger: AACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CCA 90 bp GACGGCGGCGAATCCACAGCCAGATACCCGCACTCGATGAGGCCTTaGAATCCCGCAAGTGGGGCGGCTACCGCGCACGAAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: DGGESTARYPHSMRP*NPASGAATAHEEPK
Trigger: TTTCGGTTCTTCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTGGATTCGCCGCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CCA 90 bp CCGGAGGAACAGATGTCCCCTCCAGTCAGCATACTGCAGCAGGGATaGCTCCACCCTCTGCATGTCGCGCTGACTCAGCCGCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: PEEQMSPPVSILQQG*LHPLHVALTQPPGQ
Trigger: CTGTCCTGGCGGCTGAGTCAGCGCGACATGCAGAGGGTGGAGCCATCCCTGCTGCAGTATGCTGACTGGAGGGGACATCTGTTCCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000533208.5
CDS CCA 90 bp TCAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTaGGCCCTCTGGCCACGAGACAATGACCAGCTCACCTGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: SVFCSPRTPQVHSGC*ALWPRDNDQLTCVG
Trigger: ACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CCA 90 bp GGGCAGGCCACAGAGCTCACTTACCCCCGGCCTCACACAGCACCGTaGCCAGAGCAGAGAAGAGCGAGGCACCACCATTCAGGACAACCA +
Preference number: 5 (lower is better)
Translates to: GQATELTYPRPHTAP*PEQRRARHHHSGQP
Trigger: TGGTTGTCCTGAATGGTGGTGCCTCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGCCGGGGGTAAGTGAGCTCTGTGGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS-3UTR CAA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTGACAGCAGCACCTTGTaGTCCAAAAAGCGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSDSSTL*SKKRRQ
Trigger: CTGGCGCCGCTTTTTGGACAACAAGGTGCTGCTGTC...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp CAGTCTTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTGGGGTCTTCTGCCACTaGGGATTTGCCTGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: QSSAAPERPRSTVAAGPSGVFCH*GFACKH
Trigger: GTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCC...AGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS TCA 90 bp ATTGCAGCCCTTGAGGCCAGGCAACTGGGAACCCTGCAAGCACAATaGGGCTCACAGTGCGGGGCAGGCCACAGAGCTCACTTACCCCCG +
Preference number: 5 (lower is better)
Translates to: IAALEARQLGTLQAQ*GSQCGAGHRAHLPP
Trigger: CGGGGGTAAGTGAGCTCTGTGGCCTGCCCCGCACTGTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 90 bp CACAGCCAGATACCCGCACTCGATGAGGCCTTGGAATCCCGCAAGTaGGGCGGCTACCGCGCACGAAGAACCGAAACGGCCTTCTACAGG +
Preference number: 5 (lower is better)
Translates to: HSQIPALDEALESRK*GGYRARRTETAFYR
Trigger: CCTGTAGAAGGCCGTTTCGGTTCTTCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CCA 90 bp CCCTCTGGCCACGAGACAATGACCAGCTCACCTGCGTTGGTCACTTaGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGA +
Preference number: 5 (lower is better)
Translates to: PSGHETMTSSPALVT*LLALRGTGVFCHLG
Trigger: TCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CCA 90 bp CCGGAGGAACAGATGTCCCCTCCAGTCAGCATACTGCAGCAGGGATaGCTCCACCCTCTGCATGTCGCGCTGACTCAGCTGGGGACAGAG +
Preference number: 5 (lower is better)
Translates to: PEEQMSPPVSILQQG*LHPLHVALTQLGTE
Trigger: CTCTGTCCCCAGCTGAGTCAGCGCGACATGCAGAGGGTGGAGCCATCCCTGCTGCAGTATGCTGACTGGAGGGGACATCTGTTCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS GCA 90 bp GGGAAGCCACGGCAGTGGCCACATCCTGGTTTTCTGTGTACAGCGTaGCAAAGCGGAGCCCAGACATCCCGAAGTCCTTGCTGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: GKPRQWPHPGFLCTA*QSGAQTSRSPCWLP
Trigger: GGGCAACCAGCAAGGACTTCGGGATGTCTGGGCTCCGCTTTGGCACGCTGTACACAGAAAACCAGGATGTGGCCACTGCCGTGGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000527557.5
ENST00000531190.5
ENST00000532122.5
ENST00000534035.1
CDS GCA 90 bp GCGTTGGTCACTTGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTaGCACTTGGGATTTGCCTGCAAGCACCTGCTGGACCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: ALVTWLLALRGTGVF*HLGFACKHLLDPLH
Trigger: ATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS TCA 90 bp GACGTCTCGCGAGAGACGGCTCCAGGTTTCCAGGCAGAGGAAGTGTaGTCGGCGCCAAGGGATTCGAGATGGAAGGGCAGAGGCTTTTGC +
Preference number: 5 (lower is better)
Translates to: DVSRETAPGFQAEEV*SAPRDSRWKGRGFC
Trigger: GCAAAAGCCTCTGCCCTTCCATCTCGAATCCCTTGGCGCCGATCACACTTCCTCTGCCTGGAAACCTGGAGCCGTCTCTCGCGAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS GCA 90 bp GGGAAGCCACGGCAGTGGCCACATCCTGGTTTTCTGTGTACAGCGTaGCAAAGCGGAGCCCAGACATCCCGAAGTCCTGCAGGAAGAAGC +
Preference number: 5 (lower is better)
Translates to: GKPRQWPHPGFLCTA*QSGAQTSRSPAGRS
Trigger: GCTTCTTCCTGCAGGACTTCGGGATGTCTGGGCTCCGCTTTGGCACGCTGTACACAGAAAACCAGGATGTGGCCACTGCCGTGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531505.1
CDS GCA 90 bp GCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGATTTaGCTGCAAGCACCTGCTGGACCCTCTGCATCCCTTTCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: APGSERDGGLLPLGI*LQAPAGPSASLSQV
Trigger: GACTTGAGAAAGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534035.1
CDS GCA 90 bp GCTTTTGCAAAGTGCACAGAGGGAGGCCTGAACGGCTTCCTCCTCTaGAAAGTAGTGGATCCCACCTACTTGGCGGAGCTGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: AFAKCTEGGLNGFLL*KVVDPTYLAELEEA
Trigger: CGCCTCCTCCAGCTCCGCCAAGTAGGTGGGATCCACTACTTTGCAGAGGAGGAAGCCGTTCAGGCCTCCCTCTGTGCACTTTGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS GCA 90 bp GAAAGCATACTATTGCAGCCCTTGAGGCCAGGCAACTGGGAACCCTaGAAGCACAATGAGGCTCACAGTGCGGGGCAGGCCACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: ESILLQPLRPGNWEP*KHNEAHSAGQATEL
Trigger: GAGCTCTGTGGCCTGCCCCGCACTGTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAGTATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS GCA 90 bp CTACTCCCGGGAGGAGATCAGTCACAAGAAGAGGGGTCCAGACCCTaGTCAGACCCACCCACACCCAGCCTCAGGTTTGATTTGATCCCC +
Preference number: 5 (lower is better)
Translates to: LLPGGDQSQEEGSRP*SDPPTPSLRFDLIP
Trigger: GGGGATCAAATCAAACCTGAGGCTGGGTGTGGGTGGGTCTGAGCAGGGTCTGGACCCCTCTTCTTGTGACTGATCTCCTCCCGGGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000531940.1
CDS GCA 90 bp CTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGATTTGCCTaGAAGCACCTGCTGGACCCTCTGCATCCCTTTCTCAAGTCAACC +
Preference number: 5 (lower is better)
Translates to: LALRGTGVFCHLGFA*KHLLDPLHPFLKST
Trigger: GGTTGACTTGAGAAAGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534035.1
CDS CCA 90 bp ATTGTGCCCGAAAGCATACTATTGCAGCCCTTGAGGCCAGGCAACTaGGAACCCTGCAAGCACAATGAGGCTCACAGTGCGGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: IVPESILLQPLRPGN*EPCKHNEAHSAGQA
Trigger: GGCCTGCCCCGCACTGTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAGTATGCTTTCGGGCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 90 bp GGTCTGGCTCTTGGCTTCTACATCAACCCCAGGGATCTCAGAGACTaGAACTTTGGAGCCACTGGGGAACCCAGGCACAGGCAGCCATGC +
Preference number: 5 (lower is better)
Translates to: GLALGFYINPRDLRD*NFGATGEPRHRQPC
Trigger: GCATGGCTGCCTGTGCCTGGGTTCCCCAGTGGCTCCAAAGTTCCAGTCTCTGAGATCCCTGGGGTTGATGTAGAAGCCAAGAGCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS TCA 90 bp CTGCTGGACCCTCTGCATCCCCAGGCAAAGCCGGTGGACCTGGTCTaGGAAGACAAAGCGAAACCAACCAGGCTCTTTACACTCGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLDPLHPQAKPVDLV*EDKAKPTRLFTLEG
Trigger: GCCTTCGAGTGTAAAGAGCCTGGTTGGTTTCGCTTTGTCTTCTCAGACCAGGTCCACCGGCTTTGCCTGGGGATGCAGAGGGTCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS GCA 90 bp GACTGGAACTTTGGAGCCACTGGGGAACCCAGGCACAGGCAGCCATaGAGCAACAGAAGGCTCCATTCCCTACTCATCACAACCCCAGAG +
Preference number: 5 (lower is better)
Translates to: DWNFGATGEPRHRQP*SNRRLHSLLITTPE
Trigger: CTCTGGGGTTGTGATGAGTAGGGAATGGAGCCTTCTGTTGCTGCATGGCTGCCTGTGCCTGGGTTCCCCAGTGGCTCCAAAGTTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CCA 90 bp CGGACAGCATGTAGACCTCATCCACAATCACATGCAGCCTGTGCCTaGAGTGAGGCAGGGGTGGGGAGGAGAGACTTAGTGTGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: RTACRPHPQSHAACA*SEAGVGRRDLVCRA
Trigger: TGCCCTACACACTAAGTCTCTCCTCCCCACCCCTGCCTCACTCCAGGCACAGGCTGCATGTGATTGTGGATGAGGTCTACATGCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527346.5
ENST00000531190.5
ENST00000532122.5
CDS-3UTR CAA 90 bp GATACCTTCCTGGCAAATGGCACATCCACAGTCAGTCTTCTGCAGCCCCAGAACGGCAGGTACACCTGGTaGATCCAGTCACGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: DTFLANGTSTVSLLQPQNGRYTW*IQSRSR
Trigger: CCGGGACCGTGACTGGATCAACCAGGTGTACCTGCC...GTTCTGGGGCTGCAGAAGACTGACTGTGGATGTGCCATTTGCCAGGAAGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CCA 90 bp TCTTGGCTTCTACATCAACCCCAGGGATCTCAGAGACTGGAACTTTaGAGCCACTGGGGAACCCAGGCACAGGCAGCCATGCAGCAACAG +
Preference number: 5 (lower is better)
Translates to: SWLLHQPQGSQRLEL*SHWGTQAQAAMQQQ
Trigger: CTGTTGCTGCATGGCTGCCTGTGCCTGGGTTCCCCAGTGGCTCCAAAGTTCCAGTCTCTGAGATCCCTGGGGTTGATGTAGAAGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CCA 90 bp CCATCCACCCCCAACCCATCACTTCAGAGACCCCCTCATCACTCTTaGGTGTCATGCTTAGGTCTACCCTGCTCTGTTCCTACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PSTPNPSLQRPPHHS*VSCLGLPCSVPTLL
Trigger: CAGCAAGGTAGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTGAAGTGATGGGTTGGGGGTGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS GCA 90 bp CAGAGACCCCCTCATCACTCTTGGGTGTCATGCTTAGGTCTACCCTaGTCTGTTCCTACCTTGCTGTTTCTGGGTCTGGCTCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QRPPHHSWVSCLGLP*SVPTLLFLGLALGF
Trigger: GAAGCCAAGAGCCAGACCCAGAAACAGCAAGGTAGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS-3UTR CAA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGGTGGATCCCACCTACTaGGCGGAGCTGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVVDPTY*AELEEA
Trigger: CGCCTCCTCCAGCTCCGCCAAGTAGGTGGGATCCAC...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAGCACTCGATGAGGCCTaGGAATCCCGCAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKALDEA*ESRKWG
Trigger: GCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGC...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS GCA 90 bp CCCAACCCATCACTTCAGAGACCCCCTCATCACTCTTGGGTGTCATaGTTAGGTCTACCCTGCTCTGTTCCTACCTTGCTGTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PNPSLQRPPHHSWVS*LGLPCSVPTLLFLG
Trigger: ACCCAGAAACAGCAAGGTAGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTGAAGTGATGGGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CCA 90 bp TCTACCCTGCTCTGTTCCTACCTTGCTGTTTCTGGGTCTGGCTCTTaGCTTCTACATCAACCCCAGGGATCTCAGAGACTGGAACTTTGG +
Preference number: 5 (lower is better)
Translates to: STLLCSYLAVSGSGS*LLHQPQGSQRLELW
Trigger: CCAAAGTTCCAGTCTCTGAGATCCCTGGGGTTGATGTAGAAGCCAAGAGCCAGACCCAGAAACAGCAAGGTAGGAACAGAGCAGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS GCA 90 bp CTGCTGACCCCCGGGTGCTTTGTCAAGCCACTTATTCAAGCCCCCTaGAGTCTAGTATATTCTATTGTGCCCGAAAGCATACTATTGCAG +
Preference number: 5 (lower is better)
Translates to: LLTPGCFVKPLIQAP*SLVYSIVPESILLQ
Trigger: CTGCAATAGTATGCTTTCGGGCACAATAGAATATACTAGACTGCAGGGGGCTTGAATAAGTGGCTTGACAAAGCACCCGGGGGTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS-3UTR CAA 90 bp CAGGCTGAACCACAGCTTAAGGAGTTTCCCACTGCTACAGCGAAAGACAAGAAAATGAGGATGAGGCCTTaGACCTTCACACCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: QAEPQLKEFPTATAKDKKMRMRP*TFTPSE
Trigger: CTCTGAGGGTGTGAAGGTCAAAGGCCTCATCCTCAT...TTTCTTGTCTTTCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp TGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGAAAGAGGAATGACGGTGGACATCCCGAAGTCCTaGCTGGTTGCCCACATCACA +
Preference number: 5 (lower is better)
Translates to: CAVPLTRFLGDKERGMTVDIPKS*LVAHIT
Trigger: TGTGATGTGGGCAACCAGCAAGGACTTCGGGATGTC...CACCGTCATTCCTCTTTCTTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp AATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGCCCAAGGACAGCAGCACCTaGTTGTCCAAAAAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: NGDIWTLLVLFNRREGGPKDSST*LSKKRR
Trigger: GCGCCGCTTTTTGGACAACAAGGTGCTGCTGTCCTT...GGGCCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp GAGGCTCTGGTTAGAAGCAGTCACGACTCCTCCATTCTAAATAACTCACAATGGTTACACTCGAAGGCCTaGCCAAAGGACAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: EALVRSSHDSSILNNSQWLHSKA*PKDSST
Trigger: GGTGCTGCTGTCCTTTGGCAAGGCCTTCGAGTGTAA...CCATTGTGAGTTATTTAGAATGGAGGAGTCGTGACTGCTTCTAACCAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACACCAGCTCACCTGCGTaGGTCACTTGGCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDTSSPA*VTWLLA
Trigger: AGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGT...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCAGCCCTGAAGTCCTTTaGAGGAAGGGTGAACATCTC +
Preference number: 5 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSSPEVL*RKGEHL
Trigger: GAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCT...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp CAGTTCTTCAGGCACAAAGCCAAGTTAGATACCTTCCTGGCAAATGGCACATCCATGCCACTGGGGTTCTaGTCCTCATCATACTCATCC +
Preference number: 5 (lower is better)
Translates to: QFFRHKAKLDTFLANGTSMPLGF*SSSYSS
Trigger: GGATGAGTATGATGAGGACAAGAACCCCAGTGGCAT...GGATGTGCCATTTGCCAGGAAGGTATCTAACTTGGCTTTGTGCCTGAAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp TTTTCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACTGCAGCCTGTGCCTCTaGGCAAATACCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: FSTNSPVCAVPLTRFLGDCSLCL*ANTRYS
Trigger: GGAGTACCTGGTATTTGCCAAGAGGCACAGGCTGCA...GTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS TCA 90 bp CTCATCATACTCATCCATGTGGTAGGTCCTGTAGCCCTCCTCAGCTaGATCCCAGAACCATTTAATCATTCTTCCTCTAGAGGACAGGTA +
Preference number: 5 (lower is better)
Translates to: LIILIHVVGPVALLS*IPEPFNHSSSRGQV
Trigger: TACCTGTCCTCTAGAGGAAGAATGATTAAATGGTTCTGGGATTCAGCTGAGGAGGGCTACAGGACCTACCACATGGATGAGTATGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000524990.5
ENST00000526577.5
CDS TCA 90 bp TTGAATCTAGTTTTGGTTCCAGGACAAGCCCTGGTTTCATGTCTTTaGACCACCCATTCCCATGCATCCTTTAGAGCAGGGGTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LNLVLVPGQALVSCL*TTHSHASFRAGVSK
Trigger: TTTGCTAACCCCTGCTCTAAAGGATGCATGGGAATGGGTGGTTCAAAGACATGAAACCAGGGCTTGTCCTGGAACCAAAACTAGATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531505.1
CDS CCA 90 bp CCAAATGCCAGGTTAAAATTTCCTGAGTTAAAGCAGAGTATTGCCTaGGAGTCCTGGGGGTCTTGTGGTGTAAAGGGTAGGATGAGATTA +
Preference number: 5 (lower is better)
Translates to: PNARLKFPELKQSIA*ESWGSCGVKGRMRL
Trigger: TAATCTCATCCTACCCTTTACACCACAAGACCCCCAGGACTCCCAGGCAATACTCTGCTTTAACTCAGGAAATTTTAACCTGGCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS CCA 90 bp AGGTTAAAATTTCCTGAGTTAAAGCAGAGTATTGCCTGGGAGTCCTaGGGGTCTTGTGGTGTAAAGGGTAGGATGAGATTATGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: RLKFPELKQSIAWES*GSCGVKGRMRLCGV
Trigger: AACACCACATAATCTCATCCTACCCTTTACACCACAAGACCCCCAGGACTCCCAGGCAATACTCTGCTTTAACTCAGGAAATTTTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS-3UTR CAA 90 bp TCTACAAACTCTCCTGTATGTGCTGTTCCTTTGACTCGTTTCCTTGGTGACAAAGTATGTGCTGTTCCTTaGACTCGTTTCCTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: STNSPVCAVPLTRFLGDKVCAVP*TRFLGD
Trigger: GTCACCAAGGAAACGAGTCAAAGGAACAGCACATAC...TTTGTCACCAAGGAAACGAGTCAAAGGAACAGCACATACAGGAGAGTTTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp CACAATGGAGACATATGGACTCTCCTAGTTTTGTTTAATAGGAGAGAGGGAGGGTGGACTCTCCTAGTTTaGTTTAATAGGAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: HNGDIWTLLVLFNRREGGWTLLV*FNRREG
Trigger: TCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCA...CCCTCCCTCTCTCCTATTAAACAAAACTAGGAGAGTCCATATGTCTCCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS-3UTR CAA 90 bp GAGGCTCTGGTTAGAAGCAGTCACGACTCCTCCATTCTAAATAACTCACAATGGGAAGGTACAAGTTGTTaGTTTTCTTTTCACATCCTC +
Preference number: 5 (lower is better)
Translates to: EALVRSSHDSSILNNSQWEGTSC*FSFHIL
Trigger: GAGGATGTGAAAAGAAAACAAACAACTTGTACCTTC...CCATTGTGAGTTATTTAGAATGGAGGAGTCGTGACTGCTTCTAACCAGAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS GCA 90 bp CTGGTTGATCCAGTACTCCTACCAGCAGTGTATGAGACTTCCAGCTaGTCCTTATCTTTGTCAACACTTGATGTTGTCACTATTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LVDPVLLPAVYETSS*SLSLSTLDVVTIFK
Trigger: TTTAAAAATAGTGACAACATCAAGTGTTGACAAAGATAAGGAGCAGCTGGAAGTCTCATACACTGCTGGTAGGAGTACTGGATCAACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531190.5
CDS CCA 72 bp TTTGGCGGAGCTGGAGGAGGCGGTGCTGGCACTCGGTaGGCGCCCATCACGTGTAGGTTTTCTCCGCCCGGA +
Preference number: 6 (lower is better)
Translates to: FGGAGGGGAGTR*APITCRFSPPG
Trigger: TCCGGGCGGAGAAAACCTACACGTGATGGGCGCCCACCGAGTGCCAGCACCGCCTCCTCCAGCTCCGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524990.5
CDS TCA 72 bp ACGGCGGCGAATCCACAGCCAGATACCCGCACTCGATaGGGCCTTGGAATCCCGCAAGTGGGGCGGCTACCG +
Preference number: 6 (lower is better)
Translates to: TAANPQPDTRTR*GLGIPQVGRLP
Trigger: CGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTGGATTCGCCGCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS TCA 72 bp GGAGCAGCTGTGCCATCTGGTACTGGACCAAGCCACTaGGGCCGTGGTAGCGGCAGAGGGAAGCCACGGCAG +
Preference number: 6 (lower is better)
Translates to: GAAVPSGTGPSH*GRGSGRGKPRQ
Trigger: CTGCCGTGGCTTCCCTCTGCCGCTACCACGGCCTCAGTGGCTTGGTCCAGTACCAGATGGCACAGCTGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000527557.5
ENST00000531190.5
ENST00000531505.1
ENST00000532122.5
ENST00000534035.1
CDS GCA 72 bp TTCTGCAGCCCCAGAACGCCCCAGGTCCACAGTGGCTaGTGGGCCCTCTGGCCACGAGACAATGACCAGCTC +
Preference number: 6 (lower is better)
Translates to: FCSPRTPQVHSG*WALWPRDNDQL
Trigger: GAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCTGGGGCTGCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CAA 90 bp GGACGGCGGCGAATCCACAGCCAGATACCCGCACTCGATGAGGCCTaGGAATCCCGCAAGTGGGGCGGCTACCGCGCACGAAGAACCGAA +
Preference number: 6 (lower is better)
Translates to: GRRRIHSQIPALDEA*ESRKWGGYRARRTE
Trigger: TTCGGTTCTTCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTGGATTCGCCGCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CAA 90 bp GCTGCTGGGCCCTCTGGCCACGAGACAATGACCAGCTCACCTGCGTaGGTCACTTGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: AAGPSGHETMTSSPA*VTWLLALRGTGVFC
Trigger: GCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS TCA 72 bp CCACAGTGGCTGCTGGGCCCTCTGGCCACGAGACAATaGCCAGCTCACCTGCGTTGGTCACTTGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PQWLLGPLATRQ*PAHLRWSLGSW
Trigger: CCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CCA 72 bp ATACCCGCACTCGATGAGGCCTTGGAATCCCGCAAGTaGGGCGGCTACCGCGCACGAAGAACCGAAACGGCC +
Preference number: 6 (lower is better)
Translates to: IPALDEALESRK*GGYRARRTETA
Trigger: GGCCGTTTCGGTTCTTCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CCA 72 bp GCCTTGAGCCGGGCATGGTTTTCCGGCAGGTACACCTaGTTGATCCAGTCACGGTCCCGGAGCAGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: ALSRAWFSGRYT*LIQSRSRSSCA
Trigger: GGCACAGCTGCTCCGGGACCGTGACTGGATCAACCAGGTGTACCTGCCGGAAAACCATGCCCGGCTCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000531505.1
ENST00000534035.1
CDS CCA 72 bp AGAACGCCCCAGGTCCACAGTGGCTGCTGGGCCCTCTaGCCACGAGACAATGACCAGCTCACCTGCGTTGGT +
Preference number: 6 (lower is better)
Translates to: RTPQVHSGCWAL*PRDNDQLTCVG
Trigger: ACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCAGCAGCCACTGTGGACCTGGGGCGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CCA 72 bp ACCCCAGGCTGCCCAGACGCTCTGTCGGGGCCAGTGTaGGGTGCCTCACCTCTTGGCAAATACCAGGTACTC +
Preference number: 6 (lower is better)
Translates to: TPGCPDALSGPV*GASPLGKYQVL
Trigger: GAGTACCTGGTATTTGCCAAGAGGTGAGGCACCCCACACTGGCCCCGACAGAGCGTCTGGGCAGCCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527346.5
CDS CAA 72 bp CGAATCCACAGCCAGATACCCGCACTCGATGAGGCCTaGGAATCCCGCAAGTGGGGCGGCTACCGCGCACGA +
Preference number: 6 (lower is better)
Translates to: RIHSQIPALDEA*ESRKWGGYRAR
Trigger: TCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTGGATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CAA 72 bp CCCTCTGGCCACGAGACAATGACCAGCTCACCTGCGTaGGTCACTTGGCTCCTGGCTCTGAGAGGGACGGGG +
Preference number: 6 (lower is better)
Translates to: PSGHETMTSSPA*VTWLLALRGTG
Trigger: CCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CAA 90 bp GCCCTCTGGCCACGAGACAATGACCAGCTCACCTGCGTTGGTCACTaGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTTGGG +
Preference number: 6 (lower is better)
Translates to: ALWPRDNDQLTCVGH*APGSERDGGLLPLG
Trigger: CCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CAA 90 bp GTCACTTGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTaGGGATTTGCCTGCAAGCACCTGCTGGACCCTCTGCATCCCCAG +
Preference number: 6 (lower is better)
Translates to: VTWLLALRGTGVFCH*GFACKHLLDPLHPQ
Trigger: CTGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS TCA 72 bp CTTGAGGCCAGGCAACTGGGAACCCTGCAAGCACAATaGGGCTCACAGTGCGGGGCAGGCCACAGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: LEARQLGTLQAQ*GSQCGAGHRAH
Trigger: GTGAGCTCTGTGGCCTGCCCCGCACTGTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS TCA 72 bp CTTCCCCAAGGCCAGAGCCACACAGTCAAAGGGGGCTaGTCGCTGGAAGGCTCCCAGGGAGATTTGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LPQGQSHTVKGG*SLEGSQGDLRG
Trigger: CCCCCTCAAATCTCCCTGGGAGCCTTCCAGCGATCAGCCCCCTTTGACTGTGTGGCTCTGGCCTTGGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000531940.1
CDS GCA 72 bp GGGTCTTCTGCCACTTGGGATTTGCCTGCAAGCACCTaGTGGACCCTCTGCATCCCCAGGCAAAGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: GSSATWDLPAST*WTLCIPRQSRW
Trigger: CCACCGGCTTTGCCTGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS GCA 72 bp TGGGCCCTCTGGCCACGAGACAATGACCAGCTCACCTaGGTTGGTCACTTGGCTCCTGGCTCTGAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: WALWPRDNDQLT*VGHLAPGSERD
Trigger: GTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGGCCAGAGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS GCA 72 bp CTATTGCAGCCCTTGAGGCCAGGCAACTGGGAACCCTaGAAGCACAATGAGGCTCACAGTGCGGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LLQPLRPGNWEP*KHNEAHSAGQA
Trigger: GGCCTGCCCCGCACTGTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 72 bp GAATCCACAGCCAGATACCCGCACTCGATGAGGCCTTaGAATCCCGCAAGTGGGGCGGCTACCGCGCACGAA +
Preference number: 6 (lower is better)
Translates to: ESTARYPHSMRP*NPASGAATAHE
Trigger: TTCGTGCGCGGTAGCCGCCCCACTTGCGGGATTCCAAGGCCTCATCGAGTGCGGGTATCTGGCTGTGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CCA 72 bp GGATCAGGAAAGCCTCCCCGGCCTCACACAGCACCGTaGCCAGAGCAGAGAAGAGCGAGGCACCACCATTCA +
Preference number: 6 (lower is better)
Translates to: GSGKPPRPHTAP*PEQRRARHHHS
Trigger: TGAATGGTGGTGCCTCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGCCGGGGAGGCTTTCCTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000526577.5
ENST00000531940.1
CDS CCA 72 bp ATCCCGAAGTCCTGCAGGAAGAAGCACCCTAGGCGGTaGCCAGCCCTCCATGGAGGAAGCTGGTTCCACCCA +
Preference number: 6 (lower is better)
Translates to: IPKSCRKKHPRR*PALHGGSWFHP
Trigger: TGGGTGGAACCAGCTTCCTCCATGGAGGGCTGGCCACCGCCTAGGGTGCTTCTTCCTGCAGGACTTCGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531505.1
CDS CAA 72 bp GGCTTCCTCCTCTGCAAAGTAGTGGATCCCACCTACTaGGCGGAGCTGGAGGAGGCGGTGCTGGCACTCGGT +
Preference number: 6 (lower is better)
Translates to: GFLLCKVVDPTY*AELEEAVLALG
Trigger: ACCGAGTGCCAGCACCGCCTCCTCCAGCTCCGCCAAGTAGGTGGGATCCACTACTTTGCAGAGGAGGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS TCA 72 bp GGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTTaGGGAAGGGTGAACATCTCCAGCTCTCCCGACAGC +
Preference number: 6 (lower is better)
Translates to: GPRQVVGALKSF*GRVNISSSPDS
Trigger: GCTGTCGGGAGAGCTGGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000526577.5
ENST00000527603.5
CDS TCA 72 bp CCAGCTCACCTGCGTTGGTCACTTGGCTCCTGGCTCTaGGAGGGACGGGGGTCTTCTGCCACTTGGGATTTG +
Preference number: 6 (lower is better)
Translates to: PAHLRWSLGSWL*EGRGSSATWDL
Trigger: CAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS TCA 72 bp GGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTTaGGGAAGGGTGAACATTTGGCGGAGCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GPRQVVGALKSF*GRVNIWRSWRR
Trigger: CCTCCTCCAGCTCCGCCAAATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524990.5
CDS TCA 72 bp GGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTTaGGGAAGGGTGAACATCTCCACTCTGGGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: GPRQVVGALKSF*GRVNISTLGGL
Trigger: CAGGCCACCCAGAGTGGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533208.5
CDS GCA 72 bp TGGAGCATTCTCCTTCCAGATCTTCCCCATGGCTACTaGCCAGGTCCTGCATGCAGGTGGGGCCCAGACAGG +
Preference number: 6 (lower is better)
Translates to: WSILLPDLPHGY*PGPACRWGPDR
Trigger: CCTGTCTGGGCCCCACCTGCATGCAGGACCTGGGCAGTAGCCATGGGGAAGATCTGGAAGGAGAATGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263776.9
ENST00000524990.5
ENST00000526577.5
ENST00000527603.5
ENST00000533208.5
ENST00000533404.1
CDS GCA 72 bp TCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGATTTaGCTGCAAGCACCTGCTGGACCCTCTGCATCCCCA +
Preference number: 6 (lower is better)
Translates to: SERDGGLLPLGI*LQAPAGPSASP
Trigger: TGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS GCA 72 bp ACTTGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTaGCACTTGGGATTTGCCTGCAAGCACCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: TWLLALRGTGVF*HLGFACKHLLD
Trigger: GTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS GCA 72 bp CCTCACTGTCCAGGTAGACATAGGCCAGCCGGATGTTaGCATAGAGACACACGTGCCCCGGCCTCACACAGC +
Preference number: 6 (lower is better)
Translates to: PHCPGRHRPAGC*HRDTRAPASHS
Trigger: GCTGTGTGAGGCCGGGGCACGTGTGTCTCTATGGCAACATCCGGCTGGCCTATGTCTACCTGGACAGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS GCA 72 bp ATGGGCATCCCACAAATCCCTGCTTCCCCGCTCCACTaGCAAGGAAGGGCCCAAGCAAGTAGCAGCCCACAG +
Preference number: 6 (lower is better)
Translates to: MGIPQIPASPLH*QGRAQASSSPQ
Trigger: CTGTGGGCTGCTACTTGCTTGGGCCCTTCCTTGGCAGTGGAGCGGGGAAGCAGGGATTTGTGGGATGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527346.5
CDS CCA 72 bp CACGAGACAATGACCAGCTCACCTGCGTTGGTCACTTaGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: HETMTSSPALVT*LLALRGTGVFC
Trigger: GCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CCA 72 bp ACAGAGCTCACTTACCCCCGGCCTCACACAGCACCGTaGCCAGAGCAGAGAAGAGCGAGGCACCACCATTCA +
Preference number: 6 (lower is better)
Translates to: TELTYPRPHTAP*PEQRRARHHHS
Trigger: TGAATGGTGGTGCCTCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGCCGGGGGTAAGTGAGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 72 bp ATAGAGACACACGTGCCCCGGCCTCACACAGCACCGTaGCCAGAGCAGAGAAGAGCGAGGCACCACCATTCA +
Preference number: 6 (lower is better)
Translates to: IETHVPRPHTAP*PEQRRARHHHS
Trigger: TGAATGGTGGTGCCTCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGCCGGGGCACGTGTGTCTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CCA 72 bp CGCTCTGTCGGGGCCAGTGTGGGGTGCCTCACCTCTTaGCAAATACCAGGTACTCCTGTAGCTCTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: RSVGASVGCLTS*QIPGTPVALQG
Trigger: CCCCTGAAGAGCTACAGGAGTACCTGGTATTTGCCAAGAGGTGAGGCACCCCACACTGGCCCCGACAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527346.5
CDS CAA 72 bp GGGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTaGAGGAAGGGTGAACATCTCCAGCTCTCCCGACAG +
Preference number: 6 (lower is better)
Translates to: GAQTGGGSPEVL*RKGEHLQLSRQ
Trigger: CTGTCGGGAGAGCTGGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000526577.5
ENST00000527603.5
CDS CAA 72 bp CCACGAGACAATGACCAGCTCACCTGCGTTGGTCACTaGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: PRDNDQLTCVGH*APGSERDGGLL
Trigger: CAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGAGCTGGTCATTGTCTCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS CAA 72 bp GGGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTaGAGGAAGGGTGAACATTTGGCGGAGCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GAQTGGGSPEVL*RKGEHLAELEE
Trigger: CTCCTCCAGCTCCGCCAAATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524990.5
CDS CAA 72 bp GGGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTaGAGGAAGGGTGAACATCTCCACTCTGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GAQTGGGSPEVL*RKGEHLHSGWP
Trigger: AGGCCACCCAGAGTGGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533208.5
CDS CAA 90 bp GTCACTTGGCTCCTGGCTCTGAGAGGGACGGGGGTCTTCTGCCACTaGGGATTTGCCTGCAAGCACCTGCTGGACCCTCTGCATCCCTTT +
Preference number: 6 (lower is better)
Translates to: VTWLLALRGTGVFCH*GFACKHLLDPLHPF
Trigger: AAAGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCAGGAGCCAAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534035.1
CDS TCA 72 bp CGAGAGACGGCTCCAGGTTTCCAGGCAGAGGAAGTGTaGTCGGCGCCAAGGGATTCGAGATGGAAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RETAPGFQAEEV*SAPRDSRWKGR
Trigger: TCTGCCCTTCCATCTCGAATCCCTTGGCGCCGATCACACTTCCTCTGCCTGGAAACCTGGAGCCGTCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS GCA 72 bp CGGCAGTGGCCACATCCTGGTTTTCTGTGTACAGCGTaGCAAAGCGGAGCCCAGACATCCCGAAGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: RQWPHPGFLCTA*QSGAQTSRSPA
Trigger: TGCAGGACTTCGGGATGTCTGGGCTCCGCTTTGGCACGCTGTACACAGAAAACCAGGATGTGGCCACTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531505.1
CDS GCA 72 bp TCTGAGAGGGACGGGGGTCTTCTGCCACTTGGGATTTaGCTGCAAGCACCTGCTGGACCCTCTGCATCCCTT +
Preference number: 6 (lower is better)
Translates to: SERDGGLLPLGI*LQAPAGPSASL
Trigger: AAGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534035.1
CDS CCA 72 bp TCTCTCAGGGCCATCTCCAGCTTCTCCACTGTGAGCTaGAAGGGGCGTGTGTCTAGCCCAGTGACCTCACTG +
Preference number: 6 (lower is better)
Translates to: SLRAISSFSTVS*KGRVSSPVTSL
Trigger: CAGTGAGGTCACTGGGCTAGACACACGCCCCTTCCAGCTCACAGTGGAGAAGCTGGAGATGGCCCTGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000531940.1
CDS CCA 72 bp GACATCCCGAAGTCCTTGCTGGTTGCCCACATCACATaGGTCCTCTGGGGGTCAGGGAGCCTTTCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: DIPKSLLVAHIT*VLWGSGSLSRL
Trigger: AAGCCTGGAAAGGCTCCCTGACCCCCAGAGGACCCATGTGATGTGGGCAACCAGCAAGGACTTCGGGATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000527557.5
ENST00000531190.5
ENST00000532122.5
CDS CAA 72 bp ACGCTCTGTCGGGGCCAGTGTGGGGTGCCTCACCTCTaGGCAAATACCAGGTACTCCTGTAGCTCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: TLCRGQCGVPHL*ANTRYSCSSSG
Trigger: CCCTGAAGAGCTACAGGAGTACCTGGTATTTGCCAAGAGGTGAGGCACCCCACACTGGCCCCGACAGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527346.5
CDS GCA 72 bp AAGTGCACAGAGGGAGGCCTGAACGGCTTCCTCCTCTaGAAAGTAGTGGATCCCACCTACTTGGCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: KCTEGGLNGFLL*KVVDPTYLAEL
Trigger: CAGCTCCGCCAAGTAGGTGGGATCCACTACTTTGCAGAGGAGGAAGCCGTTCAGGCCTCCCTCTGTGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS GCA 72 bp GCGCCAAGGGATTCGAGATGGAAGGGCAGAGGCTTTTaGAAAGTGCACAGAGGGAGGCCTGAACGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: APRDSRWKGRGF*KVHRGRPERLP
Trigger: AGGAAGCCGTTCAGGCCTCCCTCTGTGCACTTTGCAAAAGCCTCTGCCCTTCCATCTCGAATCCCTTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263776.9
CDS CCA 72 bp GGGGTACTGGGCTCTTGCAGTAGAAAGACAGGAACTTaGCCACTTCCTCCCGGAGGAACAGATGTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: GVLGSCSRKTGT*PLPPGGTDVPS
Trigger: GGAGGGGACATCTGTTCCTCCGGGAGGAAGTGGCCAAGTTCCTGTCTTTCTACTGCAAGAGCCCAGTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527603.5
ENST00000533208.5
CDS CCA 72 bp TGGACCCTCTGCATCCCCAGGCAAAGCCGGTGGACCTaGTCTGAGAAGACAAAGCGAAACCAACCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: WTLCIPRQSRWT*SEKTKRNQPGS
Trigger: AGAGCCTGGTTGGTTTCGCTTTGTCTTCTCAGACCAGGTCCACCGGCTTTGCCTGGGGATGCAGAGGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS CAA 90 bp CTCTTGGCTTCTACATCAACCCCAGGGATCTCAGAGACTGGAACTTaGGAGCCACTGGGGAACCCAGGCACAGGCAGCCATGCAGCAACA +
Preference number: 6 (lower is better)
Translates to: LLASTSTPGISETGT*EPLGNPGTGSHAAT
Trigger: TGTTGCTGCATGGCTGCCTGTGCCTGGGTTCCCCAGTGGCTCCAAAGTTCCAGTCTCTGAGATCCCTGGGGTTGATGTAGAAGCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS TCA 72 bp ACTCAAGAAGGGGATCCCCAATGCCCTAAGCTCTTCTaGGACATAGGTGTGGGCAGCCTTGAGCCGGGCATG +
Preference number: 6 (lower is better)
Translates to: TQEGDPQCPKLF*DIGVGSLEPGM
Trigger: CATGCCCGGCTCAAGGCTGCCCACACCTATGTCTCAGAAGAGCTTAGGGCATTGGGGATCCCCTTCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000534035.1
CDS GCA 72 bp TCTGGGGGTCAGGGAGCCTTTCCAGGCTTAGGACACTaGGGTACCCAACAGACTTCTCAAACACGGACAGCA +
Preference number: 6 (lower is better)
Translates to: SGGQGAFPGLGH*GTQQTSQTRTA
Trigger: TGCTGTCCGTGTTTGAGAAGTCTGTTGGGTACCGCAGTGTCCTAAGCCTGGAAAGGCTCCCTGACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263776.9
ENST00000527346.5
ENST00000527557.5
ENST00000531190.5
ENST00000532122.5
CDS CAA 90 bp GCCATCCACCCCCAACCCATCACTTCAGAGACCCCCTCATCACTCTaGGGTGTCATGCTTAGGTCTACCCTGCTCTGTTCCTACCTTGCT +
Preference number: 6 (lower is better)
Translates to: AIHPQPITSETPSSL*GVMLRSTLLCSYLA
Trigger: AGCAAGGTAGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTGAAGTGATGGGTTGGGGGTGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS TCA 72 bp TGCCCTTGGGCAGGTACTTTCTCAAGTCAACCCAGATaGAGAAGCCAGCCCCACGACTCAAGAAGGGGATCC +
Preference number: 6 (lower is better)
Translates to: CPWAGTFSSQPR*RSQPHDSRRGS
Trigger: GGATCCCCTTCTTGAGTCGTGGGGCTGGCTTCTTCATCTGGGTTGACTTGAGAAAGTACCTGCCCAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS TCA 72 bp CCTCTGCATCCCCAGGCAAAGCCGGTGGACCTGGTCTaGGAAGACAAAGCGAAACCAACCAGGCTCTTTACA +
Preference number: 6 (lower is better)
Translates to: PLHPQAKPVDLV*EDKAKPTRLFT
Trigger: TGTAAAGAGCCTGGTTGGTTTCGCTTTGTCTTCTCAGACCAGGTCCACCGGCTTTGCCTGGGGATGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS TCA 72 bp TGGACCCTCTGCATCCCTTTCTCAAGTCAACCCAGATaGAGAAGCCAGCCCCACGACTCAAGAAGGGGATCC +
Preference number: 6 (lower is better)
Translates to: WTLCIPFSSQPR*RSQPHDSRRGS
Trigger: GGATCCCCTTCTTGAGTCGTGGGGCTGGCTTCTTCATCTGGGTTGACTTGAGAAAGGGATGCAGAGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534035.1
CDS GCA 72 bp TGGGCAGGGTTCTGCCTGACTCCCAGAATAATTCTGTaGTACCACCCTACCTGTCTGTCCCAATCACCGGGT +
Preference number: 6 (lower is better)
Translates to: WAGFCLTPRIIL*YHPTCLSQSPG
Trigger: ACCCGGTGATTGGGACAGACAGGTAGGGTGGTAGCACAGAATTATTCTGGGAGTCAGGCAGAACCCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000531940.1
CDS CCA 72 bp GAAAGCATACTATTGCAGCCCTTGAGGCCAGGCAACTaGGAACCCTGCAAGCACAATGAGGCTCACAGTGCG +
Preference number: 6 (lower is better)
Translates to: ESILLQPLRPGN*EPCKHNEAHSA
Trigger: CGCACTGTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAGTATGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 72 bp GGGGTACTGGGCTCTTGCAGTAGAAAGACAGGAACTTaGCCACTTCCTCCCGGAGGCCTATGGCAACTACTT +
Preference number: 6 (lower is better)
Translates to: GVLGSCSRKTGT*PLPPGGLWQLL
Trigger: AAGTAGTTGCCATAGGCCTCCGGGAGGAAGTGGCCAAGTTCCTGTCTTTCTACTGCAAGAGCCCAGTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526577.5
CDS CAA 72 bp CAGCATCCACAGCACAGGGCAGGTAAAGCTGAACGCTaGTTCTGCTCATCAGAGAAACCGCCAGGACAGCAG +
Preference number: 6 (lower is better)
Translates to: QHPQHRAGKAER*FCSSEKPPGQQ
Trigger: CTGCTGTCCTGGCGGTTTCTCTGATGAGCAGAACAAGCGTTCAGCTTTACCTGCCCTGTGCTGTGGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CAA 72 bp CCCCAACCCATCACTTCAGAGACCCCCTCATCACTCTaGGGTGTCATGCTTAGGTCTACCCTGCTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: PQPITSETPSSL*GVMLRSTLLCS
Trigger: GGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTGAAGTGATGGGTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CAA 90 bp CCAGGCTCTTTACACTCGAAGGCCTTGCCAAAGGACAGCAGCACCTaGTTGTCCAAAAAGCGGCGCCAGAGCAGCATTTCCTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: PGSLHSKALPKDSST*LSKKRRQSSISSSK
Trigger: CTTTGAGGAGGAAATGCTGCTCTGGCGCCGCTTTTTGGACAACAAGGTGCTGCTGTCCTTTGGCAAGGCCTTCGAGTGTAAAGAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263776.9
ENST00000527346.5
CDS TCA 72 bp TTATGTGGTGTTCTGAGGCAGATGGCGGGTAGGAACTaGGGGAAGGGAGGAATGGGAACCTCCACAAGTGCA +
Preference number: 6 (lower is better)
Translates to: LCGVLRQMAGRN*GKGGMGTSTSA
Trigger: TGCACTTGTGGAGGTTCCCATTCCTCCCTTCCCTCAGTTCCTACCCGCCATCTGCCTCAGAACACCACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS TCA 72 bp GGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTTaGGGAAGGGTGAACATCTCAATTACCAAATGCCAG +
Preference number: 6 (lower is better)
Translates to: GPRQVVGALKSF*GRVNISITKCQ
Trigger: CTGGCATTTGGTAATTGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS GCA 72 bp CCACAGCACAGGGCAGGTAAAGCTGAACGCTTGTTCTaGTCATCAGAGAAACCGCCAGGACAGCAGGTCAAA +
Preference number: 6 (lower is better)
Translates to: PQHRAGKAERLF*SSEKPPGQQVK
Trigger: TTTGACCTGCTGTCCTGGCGGTTTCTCTGATGAGCAGAACAAGCGTTCAGCTTTACCTGCCCTGTGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 72 bp ACTGGTGCCCAAGTTAATGATGCCTCCACGGAGCTCTaGCAGCTTCTGGTCCAGTTTTCTGGAGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: TGAQVNDASTEL*QLLVQFSGAFS
Trigger: GGAGAATGCTCCAGAAAACTGGACCAGAAGCTGCCAGAGCTCCGTGGAGGCATCATTAACTTGGGCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CCA 72 bp CCCAACCCATCACTTCAGAGACCCCCTCATCACTCTTaGGTGTCATGCTTAGGTCTACCCTGCTCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: PNPSLQRPPHHS*VSCLGLPCSVP
Trigger: AGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTGAAGTGATGGGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CAA 72 bp GGGGCCCAGACAGGTGGTGGGAGCCCTGAAGTCCTTTaGAGGAAGGGTGAACATCTCAATTACCAAATGCCA +
Preference number: 6 (lower is better)
Translates to: GAQTGGGSPEVL*RKGEHLNYQMP
Trigger: TGGCATTTGGTAATTGAGATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS GCA 72 bp CCTCATCACTCTTGGGTGTCATGCTTAGGTCTACCCTaGTCTGTTCCTACCTTGCTGTTTCTGGGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: PHHSWVSCLGLP*SVPTLLFLGLA
Trigger: AGCCAGACCCAGAAACAGCAAGGTAGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS GCA 72 bp TCACTTCAGAGACCCCCTCATCACTCTTGGGTGTCATaGTTAGGTCTACCCTGCTCTGTTCCTACCTTGCTG +
Preference number: 6 (lower is better)
Translates to: SLQRPPHHSWVS*LGLPCSVPTLL
Trigger: CAGCAAGGTAGGAACAGAGCAGGGTAGACCTAAGCATGACACCCAAGAGTGATGAGGGGGTCTCTGAAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CCA 72 bp CTCTGTTCCTACCTTGCTGTTTCTGGGTCTGGCTCTTaGCTTCTACATCAACCCCAGGGATCTCAGAGACTG +
Preference number: 6 (lower is better)
Translates to: LCSYLAVSGSGS*LLHQPQGSQRL
Trigger: CAGTCTCTGAGATCCCTGGGGTTGATGTAGAAGCCAAGAGCCAGACCCAGAAACAGCAAGGTAGGAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CCA 72 bp TACCCTGCTCTGTTCCTACCTTGCTGTTTCTGGGTCTaGCTCTTGGCTTCTACATCAACCCCAGGGATCTCA +
Preference number: 6 (lower is better)
Translates to: YPALFLPCCFWV*LLASTSTPGIS
Trigger: TGAGATCCCTGGGGTTGATGTAGAAGCCAAGAGCCAGACCCAGAAACAGCAAGGTAGGAACAGAGCAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527346.5
ENST00000533208.5
CDS CAA 90 bp GCCCCCTGCAGTCTAGTATATTCTATTGTGCCCGAAAGCATACTATaGCAGCCCTTGAGGCCAGGCAACTGGGAACCCTGCAAGCACAAT +
Preference number: 6 (lower is better)
Translates to: APCSLVYSIVPESIL*QPLRPGNWEPCKHN
Trigger: ATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAGTATGCTTTCGGGCACAATAGAATATACTAGACTGCAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CAA 90 bp TTCAAACAGAAAGCCACACATACAGAGCAGGTGACAGAGGAGCTTTaGAAGCACTGCAGGGGAGAAAAGGATCTCCCGGGCACCTCCATG +
Preference number: 6 (lower is better)
Translates to: FKQKATHTEQVTEEL*KHCRGEKDLPGTSM
Trigger: CATGGAGGTGCCCGGGAGATCCTTTTCTCCCCTGCAGTGCTTCAAAAGCTCCTCTGTCACCTGCTCTGTATGTGTGGCTTTCTGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527346.5
CDS CCA 72 bp ATTCAGGACAACCACATTCTCTGGTCTGAGGGGTACTaGGCTCTTGCAGTAGAAAGACAGGAACTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: IQDNHILWSEGY*ALAVERQELGH
Trigger: GTGGCCAAGTTCCTGTCTTTCTACTGCAAGAGCCCAGTACCCCTCAGACCAGAGAATGTGGTTGTCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263776.9
ENST00000526577.5
ENST00000527603.5
ENST00000533208.5
CDS CAA 90 bp AGTCTAGTATATTCTATTGTGCCCGAAAGCATACTATTGCAGCCCTaGAGGCCAGGCAACTGGGAACCCTGCAAGCACAATGAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: SLVYSIVPESILLQP*RPGNWEPCKHNEAH
Trigger: GTGAGCCTCATTGTGCTTGCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAGTATGCTTTCGGGCACAATAGAATATACTAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS CAA 72 bp AGTCTAGTATATTCTATTGTGCCCGAAAGCATACTATaGCAGCCCTTGAGGCCAGGCAACTGGGAACCCTGC +
Preference number: 6 (lower is better)
Translates to: SLVYSIVPESIL*QPLRPGNWEPC
Trigger: GCAGGGTTCCCAGTTGCCTGGCCTCAAGGGCTGCAATAGTATGCTTTCGGGCACAATAGAATATACTAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS GCA 72 bp CCCGGGTGCTTTGTCAAGCCACTTATTCAAGCCCCCTaGAGTCTAGTATATTCTATTGTGCCCGAAAGCATA +
Preference number: 6 (lower is better)
Translates to: PGCFVKPLIQAP*SLVYSIVPESI
Trigger: TATGCTTTCGGGCACAATAGAATATACTAGACTGCAGGGGGCTTGAATAAGTGGCTTGACAAAGCACCCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527603.5
CDS TCA 72 bp CTCATCCATGTGGTAGGTCCTGTAGCCCTCCTCAGCTaGATCCCAGAACCATTTAATCATTCTTCCTCTAGA +
Preference number: 6 (lower is better)
Translates to: LIHVVGPVALLS*IPEPFNHSSSR
Trigger: TCTAGAGGAAGAATGATTAAATGGTTCTGGGATTCAGCTGAGGAGGGCTACAGGACCTACCACATGGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263776.9
ENST00000524990.5
ENST00000526577.5
CDS CCA 72 bp TTTCCTGAGTTAAAGCAGAGTATTGCCTGGGAGTCCTaGGGGTCTTGTGGTGTAAAGGGTAGGATGAGATTA +
Preference number: 6 (lower is better)
Translates to: FPELKQSIAWES*GSCGVKGRMRL
Trigger: TAATCTCATCCTACCCTTTACACCACAAGACCCCCAGGACTCCCAGGCAATACTCTGCTTTAACTCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS CCA 72 bp AGGTTAAAATTTCCTGAGTTAAAGCAGAGTATTGCCTaGGAGTCCTGGGGGTCTTGTGGTGTAAAGGGTAGG +
Preference number: 6 (lower is better)
Translates to: RLKFPELKQSIA*ESWGSCGVKGR
Trigger: CCTACCCTTTACACCACAAGACCCCCAGGACTCCCAGGCAATACTCTGCTTTAACTCAGGAAATTTTAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533404.1
CDS GCA 72 bp CCAGTACTCCTACCAGCAGTGTATGAGACTTCCAGCTaGTCCTTATCTTTGTCAACACTTGATGTTGTCACT +
Preference number: 6 (lower is better)
Translates to: PVLLPAVYETSS*SLSLSTLDVVT
Trigger: AGTGACAACATCAAGTGTTGACAAAGATAAGGAGCAGCTGGAAGTCTCATACACTGCTGGTAGGAGTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531190.5
CDS TCA 72 bp GAACTATGGAAACCCACATGTGTTTGGTTGAACAAATaGAGAGATGGGTGGTTGAATCTAGTTTTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: ELWKPTCVWLNK*RDGWLNLVLVP
Trigger: TGGAACCAAAACTAGATTCAACCACCCATCTCTTCATTTGTTCAACCAAACACATGTGGGTTTCCATAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531505.1
CDS CAA 72 bp CCAGCAGTGTATGAGACTTCCAGCTGCTCCTTATCTTaGTCAACACTTGATGTTGTCACTATTTTTAAAACT +
Preference number: 6 (lower is better)
Translates to: PAVYETSSCSLS*STLDVVTIFKT
Trigger: AGTTTTAAAAATAGTGACAACATCAAGTGTTGACAAAGATAAGGAGCAGCTGGAAGTCTCATACACTGCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531190.5