RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000091262, ENSG00000275331

Ensembl transcript IDs: ENST00000205557.12, ENST00000456970.6, ENST00000574094.6, ENST00000575728.1, ENST00000576204.6, ENST00000576683.1, ENST00000577103.1, ENST00000600761.3, ENST00000612904.3, ENST00000620078.4, ENST00000622290.4, ENST00000622290.5, ENST00000632055.1, ENST00000632157.1, ENST00000632562.1, ENST00000633611.1, ENST00000638420.1, ENST00000640696.1

Found 964 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCGAGGAGCCCGAAGATCCCGCCACGCAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGGTCGTCCGCCCACAGGCTCAGCCAG +
Preference number: 1 (lower is better)
Translates to: QPRSPKIPPRRAACV*CPPTAGSSAHRLSQ
Trigger: CTGGCTGAGCCTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp TGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCAGGGCTGCCTaGGTCTGCTGCCCACCTACTGCAGGGTCGTCCGCCCACAGGCTC +
Preference number: 1 (lower is better)
Translates to: WRQPRSPKIPPRRAA*VCCPPTAGSSAHRL
Trigger: GAGCCTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp GAAGATCCCGCCACGCAGGGCTGCCTGCGTCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAGGCTCAGCCAGTAGCCCCGGCAGAA +
Preference number: 1 (lower is better)
Translates to: EDPATQGCLRLLPTY*RVVRPQAQPVAPAE
Trigger: TTCTGCCGGGGCTACTGGCTGAGCCTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCTGCGTGGCGGGATCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 90 bp CCCACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACCAAGGCTTTGAGCTGCACCGTCTCC +
Preference number: 1 (lower is better)
Translates to: PTLRSSPRSAHLYCS*PGRLATKALSCTVS
Trigger: GGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR TCA 90 bp CTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTTaGGGGTCCTGGCTCAGACCAGGCCTGACTCCTGGGCCAGTCTGT +
Preference number: 1 (lower is better)
Translates to: LQHCRLCGLVQLGYG*GSWLRPGLTPGPVC
Trigger: ACAGACTGGCCCAGGAGTCAGGCCTGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR GCA 90 bp TTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGGCTTTGAGCTaGACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCC +
Preference number: 1 (lower is better)
Translates to: LYCSWPGRLATKALS*TVSRAAQIASSECS
Trigger: GGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp TTCTGGCCCACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTGGCCACCAAGGCTTTGAGCTGCACC +
Preference number: 1 (lower is better)
Translates to: FWPTLRSSPRSAHLY*SWPGRLATKALSCT
Trigger: GGTGCAGCTCAAAGCCTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTGGGCCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 90 bp AGAGCAACCTGGATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGA +
Preference number: 1 (lower is better)
Translates to: RATWMPGPHLGAPQP*RQTAQWLGDSRGAR
Trigger: TCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATCCAGGTTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp AGCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCCACGGCAGCAGTAGCCTCGTCCAGG +
Preference number: 1 (lower is better)
Translates to: STVHCANQLPSMACI*SSVPGSTAAVASSR
Trigger: CCTGGACGAGGCTACTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 90 bp TGGGAGATCGCACCACATCCCACAGGAGCCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAA +
Preference number: 1 (lower is better)
Translates to: WEIAPHPTGASGRAT*MPGPHLGAPQPWRQ
Trigger: TTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGATGTGGTGCGATCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp TGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATCCGCAGAGAGCCAGGGAACAGGATG +
Preference number: 1 (lower is better)
Translates to: CTVSRAAQIASSECS*SRSRFIRREPGNRM
Trigger: CATCCTGTTCCCTGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp TTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCAGGGAAC +
Preference number: 1 (lower is better)
Translates to: LSCTVSRAAQIASSE*SCSRSRFIRREPGN
Trigger: GTTCCCTGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp GAGCCACAAAGGGGGCCTGGGTTCGGAATGCCCGGACCACTGTGCTaGCCTGGAACGTCTCAGCCATGTGGGAGCAGACAGACGAGTAGC +
Preference number: 1 (lower is better)
Translates to: EPQRGPGFGMPGPLC*PGTSQPCGSRQTSS
Trigger: GCTACTCGTCTGTCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR TCA 90 bp GGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTaGGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAT +
Preference number: 1 (lower is better)
Translates to: GMCLRPPGESRVQRG*ESLLTLAAGWTGRD
Trigger: ATCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR TCA 90 bp TGGTCCAACTGGGGTACGGTTGAGGGTCCTGGCTCAGACCAGGCCTaGCTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAG +
Preference number: 1 (lower is better)
Translates to: WSNWGTVEGPGSDQA*LLGQSVKQALLGQQ
Trigger: CTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCCTGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR GCA 90 bp GCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAG +
Preference number: 1 (lower is better)
Translates to: ASTEVGFAQHSTRGS*KHQAIPQELHIGRK
Trigger: CTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 90 bp TCTGAGCCACAAAGGGGGCCTGGGTTCGGAATGCCCGGACCACTGTaGTGCCCTGGAACGTCTCAGCCATGTGGGAGCAGACAGACGAGT +
Preference number: 1 (lower is better)
Translates to: SEPQRGPGFGMPGPL*CPGTSQPCGSRQTS
Trigger: ACTCGTCTGTCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR CCA 90 bp TCAAAGAAGCTGATGGGAGATCGCACCACATCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCCCGGGCCCCACCTAGGAGCACCGCA +
Preference number: 1 (lower is better)
Translates to: SKKLMGDRTTSHRSL*KSNLDARAPPRSTA
Trigger: TGCGGTGCTCCTAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGATGTGGTGCGATCTCCCATCAGCTTCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 90 bp ACATTGGCCGCAAGCCACCTGAAACCCAGCGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGCCAGTGGGGTAGCCACTGCCACCAC +
Preference number: 1 (lower is better)
Translates to: TLAASHLKPSVEEKQ*QDGHSGQWGSHCHH
Trigger: GTGGTGGCAGTGGCTACCCCACTGGCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTACGCTGGGTTTCAGGTGGCTTGCGGCCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
3UTR TCA 90 bp CGCGGGAAACTGATCCTCTGGCTTTCATCTACGCGAGCATTGTTCTaGGCCACAAAGGGGGCCTGGGTTCGGAATGCCCGGACCACTGTG +
Preference number: 1 (lower is better)
Translates to: RGKLILWLSSTRALF*ATKGAWVRNARTTV
Trigger: CACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGCTCAGAACAATGCTCGCGTAGATGAAAGCCAGAGGATCAGTTTCCCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR GCA 90 bp GCATCCGCTCCACTGACACGATGCTGTTCTCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTGTCTGGGTCACCTGGAGGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: ASAPLTRCCSLGLSS*EQPTAVSGSPGGQQ
Trigger: CTGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGCGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 90 bp GCTAACCACATACAGGCTCTGAAACCCAGCGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGCCAGTGGGGTAGCCACTGCCACCAC +
Preference number: 1 (lower is better)
Translates to: ANHIQALKPSVEEKQ*QDGHSGQWGSHCHH
Trigger: GTGGTGGCAGTGGCTACCCCACTGGCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTACGCTGGGTTTCAGAGCCTGTATGTGGTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR GCA 90 bp CCTTGGGCGTCCAGGCATAGTCCTGCATCCGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTG +
Preference number: 1 (lower is better)
Translates to: PWASRHSPASAPLTR*CSLGLSSCEQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGCGGATGCAGGACTATGCCTGGACGCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR TCA 90 bp GGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGCCACTTTCTCTGCCATTTTCCTCCC +
Preference number: 1 (lower is better)
Translates to: GPARADLCIARSFRL*CSVIIGHFLCHFPP
Trigger: GGGAGGAAAATGGCAGAGAAAGTGGCCAATTATCACAGAGCATCAGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR TCA 90 bp CCACATTGGCCGCAAGCCACCTGTCAGCCACCAGTCGCGGGAAACTaGTCCTCTGGCTTTCATCTACGCGAGCATTGTTCTGAGCCACAA +
Preference number: 1 (lower is better)
Translates to: PHWPQATCQPPVAGN*SSGFHLREHCSEPQ
Trigger: TTGTGGCTCAGAACAATGCTCGCGTAGATGAAAGCCAGAGGATCAGTTTCCCGCGACTGGTGGCTGACAGGTGGCTTGCGGCCAATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR TCA 90 bp GAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATaGCCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGC +
Preference number: 1 (lower is better)
Translates to: ESKHRSRLNIVWSYR*PRVTSISSTAGCAG
Trigger: GCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR CCA 90 bp CTCCAGGAGTCCAAAGGCGTACATCAGCAGGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGTGTCTGTCTCCTTGGAGAAGCGGTT +
Preference number: 1 (lower is better)
Translates to: LQESKGVHQQGPEFV*NVHVNRVCLLGEAV
Trigger: AACCGCTTCTCCAAGGAGACAGACACGGTTGACGTGGACATTCCAGACAAACTCCGGTCCCTGCTGATGTACGCCTTTGGACTCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 90 bp GGGAGGAGGAGCAGCAGGAGATGCGAGGGCTGTAGTTCTCAGTCCTaGCCGCACATTGGAATCCTATGGGGGAGCTTTAAAATTATACAC +
Preference number: 1 (lower is better)
Translates to: GRRSSRRCEGCSSQS*PHIGILWGSFKIIH
Trigger: GTGTATAATTTTAAAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGACTGAGAACTACAGCCCTCGCATCTCCTGCTGCTCCTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR TCA 90 bp GGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTaGTGCTTTATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAA +
Preference number: 1 (lower is better)
Translates to: GKSSKIVVSMSTPWL*CFILEFCKMLPLGE
Trigger: TTCACCCAATGGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR TCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCCTTGAGGCCCCCAGGTaGGTCCAGAGTACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGLEAPR*VQSTAG
Trigger: CCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAG...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR GCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 2 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCGCTGCCTGCGTCTGCTaGCCACCTACTGCAGGGTCG +
Preference number: 2 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGAACVC*PPTAGS
Trigger: CGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGC...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQRAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR TCA 90 bp CCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: PQQPTGQGGLPCPGPANDLLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGTGGCCACCAAGGCTTTaGGCTGCACCGTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQWPPRL*AAPSPG
Trigger: CCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCA...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGGGAGCCTGGGCATGTaGTTGAGGCCCCCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVGSLGM*LRPPGE
Trigger: CTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 2 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGCACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 2 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 2 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCGGGCTGCCGCTCTCTaGCACCTGCCCCTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRRAAAL*HLPLVH
Trigger: ATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCG...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTT +
Preference number: 2 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGAGCAG*SNWGTV
Trigger: AACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGC...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR CCA 90 bp CCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: PQQPTGQGGLPCPGPANDTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 2 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CAA 90 bp GCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAG +
Preference number: 2 (lower is better)
Translates to: AHLYCSWPGRLATKA*SCTVSRAAQIASSE
Trigger: CTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CAA 90 bp TCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTaGAGGGTCCTGGCTCAGACCAGGCCTGACTCCTGGGCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: SPALQAVRAGPTGVR*RVLAQTRPDSWASL
Trigger: CAGACTGGCCCAGGAGTCAGGCCTGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR TCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQLLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 2 (lower is better)
Translates to: SRAAQIASSECSCSRSRFLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 2 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: MTRTRAQSITERRRWAMSRAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 2 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCATTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: QLPSMACICSSVPGSTAALKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 2 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTGGAGCGCAGTGTGTaGAGCCCCACGTGGGCAATG +
Preference number: 2 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQLERSV*SPTWAM
Trigger: CATTGCCCACGTGGGGCTGCACACACTGCGCTCCAG...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGG +
Preference number: 2 (lower is better)
Translates to: QLPSMACICSSVPGSTAAIASSE*SCSRSR
Trigger: CCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: MTRTRAQSITERRRWAMSASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGGGCCTGGGTTCGGAATaGCCGGACCACTGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGGLGSE*PDHCAA
Trigger: GGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCC...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTT +
Preference number: 2 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLAGCAG*SNWGTV
Trigger: AACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGC...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAAACAGCCCAATGGCTTaGAGACAGCCGAGGAGCCCG +
Preference number: 2 (lower is better)
Translates to: QLPSMACICSSVPGSTAANSPMA*RQPRSP
Trigger: CGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTT...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 2 (lower is better)
Translates to: MTRTRAQSITERRRWAMSAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQTSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRTSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTTCTGGGCCAGCAGCTaGGCCGGGCTGCCGCTCTCT +
Preference number: 2 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPFWASS*AGLPLS
Trigger: AGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAA...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CAA 90 bp AGCTGTTTCTGGCCCACGCTCAGGTCCTCGCCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGGCTTTGAGC +
Preference number: 2 (lower is better)
Translates to: SCFWPTLRSSPRSAH*YCSWPGRLATKALS
Trigger: GCTCAAAGCCTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTGGGCCAGAAACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: PTRPALRWALLSTAHVAAPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCTTCCATCTCCAGCACTaGAGGCTGTGCGGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: GEMGPARADLCIARSFRLFHLQH*RLCGLV
Trigger: GACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAA...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR GCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGGCTGCCTGCGTCTGCTaGCCACCTACTGCAGGGTCG +
Preference number: 2 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVAACVC*PPTAGS
Trigger: CGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGC...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 2 (lower is better)
Translates to: SCVDLEGHALHSQRELRSQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGTTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: PLSMTRTRAQSITERRRWLKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 2 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTCCCGGACCACTGTGCTaGCCTGGAACGTCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: PTRPALRWALLSTAHVAAPGPLC*PGTSQP
Trigger: TGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGG...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp GCAAACAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: ANSPMAWRQPRSPKIPPRAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...GCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCACATTGGCTGCAGGGTaGACAGGGCGAGATGGGCCC +
Preference number: 2 (lower is better)
Translates to: MTRTRAQSITERRRWAMSTLAAG*TGRDGP
Trigger: GGGCCCATCTCGCCCTGTCCACCCTGCAGCCAATGT...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGAACAGCCCAATGGCTTaGAGACAGCCGAGGAGCCCG +
Preference number: 2 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKNSPMA*RQPRSP
Trigger: CGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTT...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCATCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 2 (lower is better)
Translates to: QLPSMACICSSVPGSTAASHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTGCCACAAAGGGGGCCTaGGTTCGGAATGCCCGGACC +
Preference number: 2 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSATKGA*VRNART
Trigger: GGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGC...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR TCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGACGAGTAGCTGGCTaGCTCCAAGCGTCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: SCTVSRAAQIASSECSCSRRVAG*LQASQL
Trigger: CAGCTGAGACGCTTGGAGTCAGCCAGCTACTCGTCT...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: AAQIASSECSCSRSRFIRRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: SRAAQIASSECSCSRSRFRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGCCGGAGAAGGGCACGTaGCAGACACAGGAGCTGTTT +
Preference number: 2 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQPEKGT*QTQELF
Trigger: AAACAGCTCCTGTGTCTGGCACGTGCCCTTCTCCGG...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR CCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 2 (lower is better)
Translates to: AAQIASSECSCSRSRFIRSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGTCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 2 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQSAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGTGTCTGGGTCACCTaGAGGGCAGCAGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: SCTVSRAAQIASSECSCSSVWVT*RAAETE
Trigger: CTCTGTCTCTGCTGCCCTCCAGGTGACCCAGACACT...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: DRARWALPGQTCVLLGPSTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCTCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 2 (lower is better)
Translates to: AAQIASSECSCSRSRFIRSREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGTCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 2 (lower is better)
Translates to: SCVDLEGHALHSQRELRSSREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGTCCAGGATGAGGATCTaGGTCTTCCGGAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQSRMRI*VFRRRA
Trigger: TGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGA...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGTGTGGAGCTATCGATaGCCACGGGTCACTTCCATC +
Preference number: 2 (lower is better)
Translates to: DARAPPRSTAAMEANSPMVWSYR*PRVTSI
Trigger: GATGGAAGTGACCCGTGGTCATCGATAGCTCCACAC...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR TCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGC +
Preference number: 2 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGRSFRL*CSVIIG
Trigger: GCCAATTATCACAGAGCATCAGAGCCGGAAGGACCT...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR TCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGC +
Preference number: 2 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRRSFRL*CSVIIG
Trigger: GCCAATTATCACAGAGCATCAGAGCCGGAAGGACCT...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR TCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGC +
Preference number: 2 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQRSFRL*CSVIIG
Trigger: GCCAATTATCACAGAGCATCAGAGCCGGAAGGACCT...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR TCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGAAGCGGTTTAGCAGGTaGCCAATGGGTGTCCGCTCA +
Preference number: 2 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKKRFSR*PMGVRS
Trigger: TGAGCGGACACCCATTGGTCACCTGCTAAACCGCTT...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTACTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: CVDLEGHALHSQRELRSVLLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGAGGCAAACAGCCCAATaGCTTGGAGACAGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: PLSMTRTRAQSITERRRWRQTAQ*LGDSRG
Trigger: TCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCT...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 2 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGCACAGGAGCTGTTTCTaGCCCACGCTCAGGTCCTCG +
Preference number: 2 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPHRSCF*PTLRSS
Trigger: CGAGGACCTGAGCGTGGGCCAGAAACAGCTCCTGTG...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCCAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: AAQIASSECSCSRSRFIRQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 2 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGTCAGCCACCATTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: PGHSPGAPHWPQATCQPPLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...TGGTGGCTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGTCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 2 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVSHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 2 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: SRAAQIASSECSCSRSRFVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 2 (lower is better)
Translates to: CVDLEGHALHSQRELRSVSAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCAACAGGATGGGGTCCTaGGGGATGATGCTGATCCTG +
Preference number: 2 (lower is better)
Translates to: MTRTRAQSITERRRWAMSNRMGS*GMMLIL
Trigger: CAGGATCAGCATCATCCCCCAGGACCCCATCCTGTT...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCAACAGGATGGGGTCCTaGGGGATGATGCTGATCCTG +
Preference number: 2 (lower is better)
Translates to: SRAAQIASSECSCSRSRFNRMGS*GMMLIL
Trigger: CAGGATCAGCATCATCCCCCAGGACCCCATCCTGTT...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 2 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: CVDLEGHALHSQRELRSVLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SRAAQIASSECSCSRSRFAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAAGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEGAPQP*RQTAQW
Trigger: CCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCC...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
3UTR-3UTR CCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 2 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGTCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 2 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKSHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCACTGGAGAACAGAGCATaGTCACTGGGGGCAGGAGCG +
Preference number: 2 (lower is better)
Translates to: GHLVFVSLELISGGGGGALENRA*SLGAGA
Trigger: CGCTCCTGCCCCCAGTGACCATGCTCTGTTCTCCAG...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR-3UTR TCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGGCGTCTCAGCTGGCATaGGCTAACCACATACAGGCT +
Preference number: 2 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKASQLA*ANHIQA
Trigger: AGCCTGTATGTGGTTAGCTCATGCCAGCTGAGACGC...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCATTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: IASSECSCSRSRFIRREPLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 2 (lower is better)
Translates to: EKPTRPALRWALLSTAHVGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGGGGAAACTGATCCTCTaGCTTTCATCTACGCGAGCA +
Preference number: 2 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGGKLIL*LSSTRA
Trigger: TGCTCGCGTAGATGAAAGCCAGAGGATCAGTTTCCC...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR CAA 90 bp TGCATCCGCTCCACTGACACGATGCTGTTCTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGTGTCTGGGTCACCTGGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: CIRSTDTMLFSRSVQ*RTTHCSVWVTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGCGGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp CCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGTCAGCCACCAATTGGCCACTTTCTCTaGCATTTTCCTCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: PGHSPGAPHWPQATCQPPIGHFL*HFPPRE
Trigger: CTCTCTGGGAGGAAAATGGCAGAGAAAGTGGCCAAT...TGGTGGCTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGAAAGTACACACAGCATaGCAGTTCCCAGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVKVHTA*QFPASE
Trigger: CTCTGAGGCTGGGAACTGCCATGCTGTGTGTACTTT...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGAACAGCCCAATGGCTTaGAGACAGCCGAGGAGCCCG +
Preference number: 2 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGNSPMA*RQPRSP
Trigger: CGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTT...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSLGLSS*EQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAG...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CAA 90 bp CTGACCTCCAGGAGTCCAAAGGCGTACATCAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCAACCGTGTCTGTCTCCTTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: LTSRSPKAYISRDRS*SGMSTSTVSVSLEK
Trigger: CTTCTCCAAGGAGACAGACACGGTTGACGTGGACATTCCAGACAAACTCCGGTCCCTGCTGATGTACGCCTTTGGACTCCTGGAGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR TCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR TCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTTCTTTAACTGCATGTaGGTCTGGGATTATCCCAAA +
Preference number: 2 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSFFNCM*VWDYPK
Trigger: TTTGGGATAATCCCAGACTCACATGCAGTTAAAGAA...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTT +
Preference number: 2 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPAGCAG*SNWGTV
Trigger: AACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGC...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR CCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCAAAAGTACACACAGCATaGCAGTTCCCAGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: GHLVFVSLELISGGGGGAKVHTA*QFPASE
Trigger: CTCTGAGGCTGGGAACTGCCATGCTGTGTGTACTTT...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR-3UTR CCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGTACCATTGGGTGAAATaGGGTACCAAGTACACGAAT +
Preference number: 2 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGYHWVK*GTKYTN
Trigger: ATTCGTGTACTTGGTACCCCATTTCACCCAATGGTA...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGAGGCAAACAGCCCAATaGCTTGGAGACAGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGRQTAQ*LGDSRG
Trigger: TCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCT...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR GCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGGGCGAGATGGGCCCTaGCCGGGCAGACCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCGRDGP*PGRPVY
Trigger: ATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCC...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAATGCTCTGTGATAATTaGCCACTTTCTCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVMLCDN*PLSLPF
Trigger: AAATGGCAGAGAAAGTGGCCAATTATCACAGAGCAT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCATGCTCTGTGATAATTaGCCACTTTCTCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: DRARWALPGQTCVLLGPSMLCDN*PLSLPF
Trigger: AAATGGCAGAGAAAGTGGCCAATTATCACAGAGCAT...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR GCA 90 bp GAGCCACAAAGGGGGCCTGGGTTCGGAATGCCCGGACCACTGTGCTGCCCTGGATTTATCCTAGAGTTTTaGAAGATGTTACCATTGGGT +
Preference number: 2 (lower is better)
Translates to: EPQRGPGFGMPGPLCCPGFILEF*KMLPLG
Trigger: ACCCAATGGTAACATCTTGCAAAACTCTAGGATAAA...TCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTT +
Preference number: 2 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCAGCAG*SNWGTV
Trigger: AACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGC...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR TCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATACTTGAGGCCCCCAGGTaGGTCCAGAGTACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSILEAPR*VQSTAG
Trigger: CCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAG...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR TCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGGGCGAGATGGGCCCTaGCCGGGCAGACCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVGRDGP*PGRPVY
Trigger: ATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGGGAGCCTGGGCATGTaGTTGAGGCCCCCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVGSLGM*LRPPGE
Trigger: CTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHRAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHSMACI*SSVPGS
Trigger: GGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCT...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACACATTGGCTGCAGGGTaGACAGGGCGAGATGGGCCC +
Preference number: 2 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHTLAAG*TGRDGP
Trigger: GGGCCCATCTCGCCCTGTCCACCCTGCAGCCAATGT...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR GCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCGCTGTTGACATTGGCTaGAGGGTGGACAGGGCGAGA +
Preference number: 2 (lower is better)
Translates to: NRARLLCQCQHPGCDALSAVDIG*RVDRAR
Trigger: TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGC...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR GCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACAGGGAGCCTGGGCATGTaGTTGAGGCCCCCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTGSLGM*LRPPGE
Trigger: CTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR-3UTR CCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCACACATTGGAATCCTATaGGGGAGCTTTAAAATTATA +
Preference number: 2 (lower is better)
Translates to: GHLVFVSLELISGGGGGAHIGIL*GSFKII
Trigger: TATAATTTTAAAGCTCCCCCATAGGATTCCAATGTG...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR-3UTR TCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTT +
Preference number: 2 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVAGCAG*SNWGTV
Trigger: AACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGC...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR TCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATAAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGC +
Preference number: 2 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIRSFRL*CSVIIG
Trigger: GCCAATTATCACAGAGCATCAGAGCCGGAAGGACCT...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTAAAGTACACACAGCATaGCAGTTCCCAGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVKVHTA*QFPASE
Trigger: CTCTGAGGCTGGGAACTGCCATGCTGTGTGTACTTT...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR TCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCTTCTTTAACTGCATGTaGGTCTGGGATTATCCCAAA +
Preference number: 2 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTFFNCM*VWDYPK
Trigger: TTTGGGATAATCCCAGACTCACATGCAGTTAAAGAA...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR GCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTATTGGCCACTTTCTCTaGCATTTTCCTCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVIGHFL*HFPPRE
Trigger: CTCTCTGGGAGGAAAATGGCAGAGAAAGTGGCCAAT...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR-3UTR CCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATAATGCTCTGTGATAATTaGCCACTTTCTCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIMLCDN*PLSLPF
Trigger: AAATGGCAGAGAAAGTGGCCAATTATCACAGAGCAT...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR GCA 72 bp AGCCCGAAGATCCCGCCACGCAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGGTCGTCCGCCCACAGG +
Preference number: 3 (lower is better)
Translates to: SPKIPPRRAACV*CPPTAGSSAHR
Trigger: CCTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCTGCGTGGCGGGATCTTCGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp GAGCCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGATGCCCACCTTCTCTCC +
Preference number: 3 (lower is better)
Translates to: EPQQPTGQGGLP*PGPANDAHLLS
Trigger: GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGAAA +
Preference number: 3 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCPRSST*AASHLK
Trigger: TTTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGG...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
3UTR GCA 72 bp GCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCTCTCCTGCGTGGATCT +
Preference number: 3 (lower is better)
Translates to: AHWPGRTSLPRS*QRCPPSLLRGS
Trigger: AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp GCACCACATCCCACAGGAGCCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTAGGAGCACCGCAGCCA +
Preference number: 3 (lower is better)
Translates to: APHPTGASGRAT*MPGPHLGAPQP
Trigger: TGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGATGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp TCCTGGAGCGCAGTGTGTGCAGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGATCCCACCCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: SWSAVCAAPRGQ*GPRRSRSHPQL
Trigger: CAGCTGAGGGTGGGATCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGCTGCACACACTGCGCTCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATCCGCAGAGAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: SRAAQIASSECS*SRSRFIRREPG
Trigger: CCCTGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp CACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCCACGGCAGCAGTAGCC +
Preference number: 3 (lower is better)
Translates to: HCANQLPSMACI*SSVPGSTAAVA
Trigger: GGCTACTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp AGGGGGCCTGGGTTCGGAATGCCCGGACCACTGTGCTaGCCTGGAACGTCTCAGCCATGTGGGAGCAGACAG +
Preference number: 3 (lower is better)
Translates to: RGPGFGMPGPLC*PGTSQPCGSRQ
Trigger: CTGTCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR CCA 72 bp TGGATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGA +
Preference number: 3 (lower is better)
Translates to: WMPGPHLGAPQP*RQTAQWLGDSR
Trigger: TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp AGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACCAAGGCTTTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: RSSPRSAHLYCS*PGRLATKALSC
Trigger: GCAGCTCAAAGCCTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp ATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCTGGCTCAGACCAGGCC +
Preference number: 3 (lower is better)
Translates to: ISSTAGCAGWSN*GTVEGPGSDQA
Trigger: GGCCTGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGAGTCGCTGTTGACATaGGCTGCAGGGTGGACAGGG +
Preference number: 3 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVESLLT*AAGWTG
Trigger: CCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTC...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGAAACAGCCCAATGGCTaGGAGACAGCCGAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRKQPNG*ETAEEP
Trigger: GGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTT...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp TTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCCTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: LSCTVSRAAQIASSECSCLATKA*SCTVSR
Trigger: CCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAG...GCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCTCTGCCACCTGCCCCTaGTCCATGACCAGAACCCGG +
Preference number: 3 (lower is better)
Translates to: MTRTRAQSITERRRWAMSSATCP*SMTRTR
Trigger: CCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp ACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTaGATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCA +
Preference number: 3 (lower is better)
Translates to: TVHCANQLPSMA*ICSSVPGSTAA
Trigger: TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp CAAAGGGGGCCTGGGTTCGGAATGCCCGGACCACTGTaGTGCCCTGGAACGTCTCAGCCATGTGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: QRGPGFGMPGPL*CPGTSQPCGSR
Trigger: TCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR CCA 72 bp GCCTGGGTTCGGAATGCCCGGACCACTGTGCTGCCCTaGAACGTCTCAGCCATGTGGGAGCAGACAGACGAG +
Preference number: 3 (lower is better)
Translates to: AWVRNARTTVLP*NVSAMWEQTDE
Trigger: CTCGTCTGTCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR CCA 72 bp CTGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTaGCCGCAAGCCACCTGTCAGCCACCAGTCGCGGGA +
Preference number: 3 (lower is better)
Translates to: LQTPGHSPGAPH*PQATCQPPVAG
Trigger: TCCCGCGACTGGTGGCTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGGCAGAAGGAGGCCACTaGCTGGCAGAGGAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: REDFPAPVLPTMPTFSPAAEGGH*LAEEEE
Trigger: TTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTGC...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 3 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCGGGGGCACCTGGTTTTaGTGTCCTTGGAGCTCATCT +
Preference number: 3 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGGGTWF*CPWSSS
Trigger: AGATGAGCTCCAAGGACACAAAAACCAGGTGCCCCC...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR-3UTR CAA 90 bp CCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGTCAGCCACCAGGGCAGACCTGTGTATaGCTAGGTCCTTCCGGCTCT +
Preference number: 3 (lower is better)
Translates to: PGHSPGAPHWPQATCQPPGQTCV*LGPSGS
Trigger: AGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCC...TGGTGGCTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 3 (lower is better)
Translates to: REDFPAPVLPTMPTFSPASRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 3 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSSRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR TCA 72 bp GTGAGTCCAGAGTACAGCGGGGCTGAGAGTCGCTGTTaGCATTGGCTGCAGGGTGGACAGGGCGAGATGGGC +
Preference number: 3 (lower is better)
Translates to: VSPEYSGAESRC*HWLQGGQGEMG
Trigger: GCCCATCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGTACTCTGGACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR TCA 72 bp TGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAGCCAGCGGGAGCTCAG +
Preference number: 3 (lower is better)
Translates to: CQRCPPSLLRGS*RTRPAQPAGAQ
Trigger: CTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp GTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTTGAGGGTCCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: VTSISSTAGCAG*SNWGTVEGPGS
Trigger: TGAGCCAGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 3 (lower is better)
Translates to: PLSMTRTRAQSITERRRWSRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACA +
Preference number: 3 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVSPAWI*KDTPCT
Trigger: TGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGA...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR TCA 72 bp TTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTaGGAGTCGCTGTTGACATTGGCTGCAGGGTGGACA +
Preference number: 3 (lower is better)
Translates to: LRPPGESRVQRG*ESLLTLAAGWT
Trigger: TGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR GCA 72 bp CTATCGATGACCACGGGTCACTTCCATCTCCAGCACTaGAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGT +
Preference number: 3 (lower is better)
Translates to: LSMTTGHFHLQH*RLCGLVQLGYG
Trigger: ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR CAA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 3 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp GAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCCCAGGAGCTCCACATT +
Preference number: 3 (lower is better)
Translates to: EVGFAQHSTRGS*KHQAIPQELHI
Trigger: AATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp GGGGCAGGAGCGAGAGTGATGGGTGTGGTCGGAAAATaGTGGTGGCTATTCCGTATCCTCACCCTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: GAGARVMGVVGK*WWLFRILTLVW
Trigger: CCACACCAGGGTGAGGATACGGAATAGCCACCACCATTTTCCGACCACACCCATCACTCTCGCTCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR-3UTR CAA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCAACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 3 (lower is better)
Translates to: IASSECSCSRSRFIRREPTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 3 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 3 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVSRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 3 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR-3UTR CAA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGCTTTATCCTAGAGTTTaGCAAGATGTTACCATTGGG +
Preference number: 3 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQLYPRV*QDVTIG
Trigger: CCCAATGGTAACATCTTGCAAAACTCTAGGATAAAG...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR TCA 72 bp CCGCAAGCCACCTGTCAGCCACCAGTCGCGGGAAACTaGTCCTCTGGCTTTCATCTACGCGAGCATTGTTCT +
Preference number: 3 (lower is better)
Translates to: PQATCQPPVAGN*SSGFHLREHCS
Trigger: AGAACAATGCTCGCGTAGATGAAAGCCAGAGGATCAGTTTCCCGCGACTGGTGGCTGACAGGTGGCTTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR TCA 72 bp TACACACAGCATGGCAGTTCCCAGCCTCAGAGATTCTaGTTTAAGGGTCTAGCCGGGAGCCTGGGCATGTGC +
Preference number: 3 (lower is better)
Translates to: YTQHGSSQPQRF*FKGLAGSLGMC
Trigger: GCACATGCCCAGGCTCCCGGCTAGACCCTTAAATCAGAATCTCTGAGGCTGGGAACTGCCATGCTGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR GCA 72 bp CCACTGACACGATGCTGTTCTCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTGTCTGGGTCACCTGGA +
Preference number: 3 (lower is better)
Translates to: PLTRCCSLGLSS*EQPTAVSGSPG
Trigger: TCCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR GCA 72 bp TCCAGGCATAGTCCTGCATCCGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCC +
Preference number: 3 (lower is better)
Translates to: SRHSPASAPLTR*CSLGLSSCEQP
Trigger: GGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGCGGATGCAGGACTATGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp GCAGGAGCGAGAGTGATGGGTGTGGTCGGAAAATGGTaGTGGCTATTCCGTATCCTCACCCTGGTGTGGATT +
Preference number: 3 (lower is better)
Translates to: AGARVMGVVGKW*WLFRILTLVWI
Trigger: AATCCACACCAGGGTGAGGATACGGAATAGCCACCACCATTTTCCGACCACACCCATCACTCTCGCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR CCA 72 bp CACACACACACACACACACACACACACACACACAACTaGAGAACAGAGCATGGTCACTGGGGGCAGGAGCGA +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTHN*RTEHGHWGQER
Trigger: TCGCTCCTGCCCCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR TCA 72 bp CACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATaGCCACGGGTCACTTCCATCTCCAGCACTGCAGGC +
Preference number: 3 (lower is better)
Translates to: HRSRLNIVWSYR*PRVTSISSTAG
Trigger: GCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR CCA 72 bp TCCAAAGGCGTACATCAGCAGGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGTGTCTGTCTCCTTGGA +
Preference number: 3 (lower is better)
Translates to: SKGVHQQGPEFV*NVHVNRVCLLG
Trigger: TCCAAGGAGACAGACACGGTTGACGTGGACATTCCAGACAAACTCCGGTCCCTGCTGATGTACGCCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
3UTR CCA 72 bp GGAGCGAGAGTGATGGGTGTGGTCGGAAAATGGTGGTaGCTATTCCGTATCCTCACCCTGGTGTGGATTCAT +
Preference number: 3 (lower is better)
Translates to: GARVMGVVGKWW*LFRILTLVWIH
Trigger: ATGAATCCACACCAGGGTGAGGATACGGAATAGCCACCACCATTTTCCGACCACACCCATCACTCTCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR CCA 72 bp AGCAGCAGGAGATGCGAGGGCTGTAGTTCTCAGTCCTaGCCGCACATTGGAATCCTATGGGGGAGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: SSRRCEGCSSQS*PHIGILWGSFK
Trigger: TTTAAAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGACTGAGAACTACAGCCCTCGCATCTCCTGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR TCA 72 bp CGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGCCACTTTCTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: RADLCIARSFRL*CSVIIGHFLCH
Trigger: ATGGCAGAGAAAGTGGCCAATTATCACAGAGCATCAGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000638420.1
ENST00000640696.1
3UTR-3UTR CAA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTAAACAGCCCAATGGCTaGGAGACAGCCGAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVKQPNG*ETAEEP
Trigger: GGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTT...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.4
3UTR-3UTR CAA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGGGCAGACCTGTGTATaGCTAGGTCCTTCCGGCTCT +
Preference number: 3 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHGQTCV*LGPSGS
Trigger: AGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCC...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR TCA 72 bp CTATCCTTTCTCCAAGTCATTTTTCAATCCCTGCTATaGAATCAAGGAGCAACTCTCTGTTGGGCCAGTAAG +
Preference number: 3 (lower is better)
Translates to: LSFLQVIFQSLL*NQGATLCWASK
Trigger: CTTACTGGCCCAACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAAAGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
3UTR TCA 72 bp AGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTaGTGCTTTATCCTAGAGTTTTGCAAGATGTTACCA +
Preference number: 3 (lower is better)
Translates to: SKIVVSMSTPWL*CFILEFCKMLP
Trigger: TGGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.4
ENST00000640696.1
3UTR GCA 72 bp AAAAACTATCCTTTCTCCAAGTCATTTTTCAATCCCTaGTATGAAATCAAGGAGCAACTCTCTGTTGGGCCA +
Preference number: 3 (lower is better)
Translates to: KNYPFSKSFFNP*YEIKEQLSVGP
Trigger: TGGCCCAACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAAAGGATAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR GCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCGCAGCTGGGCCGGGCTaGCGCTCTCTGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGAAGPG*RSLPPA
Trigger: GGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGC...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCAGCTGGGCCGGGCTaGCGCTCTCTGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLAAGPG*RSLPPA
Trigger: GGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGC...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCCGGACAGGGTCGCTCTaGAAGCCCGCTCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGRTGSL*KPAPEA
Trigger: GGCCTCCGGAGCGGGCTTCCAGAGCGACCCTGTCCG...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCGGGCTGCCGCTCTCTaGCACCTGCCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCRAAAL*HLPLVH
Trigger: ATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCG...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGTTCTGGGCCAGCAGCTaGGCCGGGCTGCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRFWASS*AGLPLS
Trigger: AGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAA...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCAGGGAGGACTTCCCTaGCCCCACTGGACCGACAAC +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCQGGLP*PHWTDN
Trigger: GTTGTCGGTCCAGTGGGGGCAGGGAAGTCCTCCCTG...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCAGGGCCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: QPNGLETAEEPEDPATQGLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...GCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGCTGCCTGCGTCTGCTaGCCACCTACTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRAACVC*PPTAGS
Trigger: CGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTGGGCCGGGCTaGCGCTCTCTGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVAAGPG*RSLPPA
Trigger: GGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGC...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGGAGCCTGGGCATGTaGTTGAGGCCCCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRGSLGM*LRPPGE
Trigger: CTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATCCGCACTGGCCTTTCTaGAGCCGCTGGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PQQPTGQGGLPCPGPANDPHWPF*SRWTEP
Trigger: TGGCTCTGTCCAGCGGCTCCAGAAAGGCCAGTGCGG...ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCAGGGAGGGCTTTCCTaGGACCAGGCGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCQGGLS*DQAKVA
Trigger: TGCCACCTTCGCCTGGTCCCAGGAAAGCCCTCCCTG...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCACATGCTGGCCAACGTaGGCATCCAGGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSTCWPT*ASRAAR
Trigger: CCTGGCGGCCCTGGATGCCCACGTTGGCCAGCATGT...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGTTCTGGGCCAGCAGCTaGGCCGGGCTGCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWFWASS*AGLPLS
Trigger: AGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAA...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGTTCTGGGCCAGCAGCTaGGCCGGGCTGCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKFWASS*AGLPLS
Trigger: AGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAA...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
3UTR CAA 72 bp TGGCCCACGCTCAGGTCCTCGCCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: WPTLRSSPRSAH*YCSWPGRLATK
Trigger: CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTGGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
CDS-3UTR TCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGAACCCCTCCACCTTTaGCAGCTCCCCAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQREPLHL*QLPKEG
Trigger: GCCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGTGGCCACCAAGGCTTTaGGCTGCACCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQWPPRL*AAPSPG
Trigger: CCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCA...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACAGCACCCTCGATaGTCACGAACCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCPQHPR*SRTPPP
Trigger: AGGTGGAGGGGTTCGTGAGCATCGAGGGTGCTGTGG...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGTCCTGCCTGCAGAGGTaGCTCTGGGGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQSCLQR*LWGPWC
Trigger: GCACCAAGGACCCCAGAGGCACCTCTGCAGGCAGGA...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTCTCGGGCCTCCTGCCTaGAGAGGTGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAALGPPA*RGASGV
Trigger: GACCCCAGAGGCACCTCTGCAGGCAGGAGGCCCGAG...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGCTGCCTGCGTCTGCTaGCCACCTACTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVAACVC*PPTAGS
Trigger: CGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGC...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVRAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGATCCCACCCTCAGCTaGCTCCTGGAGCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLDPTLS*LLEPQQ
Trigger: CTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATC...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCACTGGAGCGCAGTGTGTaGAGCCCCACGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: QLPSMACICSSVPGSTAALERSV*SPTWAM
Trigger: CATTGCCCACGTGGGGCTGCACACACTGCGCTCCAG...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GEMGPARADLCIARSFRLASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGCGGGCTGCCGCTCTCTaGCACCTGCCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: REDFPAPVLPTMPTFSPARAAAL*HLPLVH
Trigger: ATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCG...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTACGGACAGGGTCGCTCTaGAAGCCCGCTCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVRTGSL*KPAPEA
Trigger: GGCCTCCGGAGCGGGCTTCCAGAGCGACCCTGTCCG...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCCCGCACTGGCCTTTCTaGAGCCGCTGGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGPHWPF*SRWTEP
Trigger: TGGCTCTGTCCAGCGGCTCCAGAAAGGCCAGTGCGG...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGAAGGCGCCCAGCTCCTaGCCTCGGATGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVKAPSS*PRMPRT
Trigger: AGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTT...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCAGGGCCTGCAGAGGTGCCTCTaGGGTCCTTGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QPNGLETAEEPEDPATQGLQRCL*GPWCWS
Trigger: GGACCAGCACCAAGGACCCCAGAGGCACCTCTGCAG...GCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTTCTGGGCCAGCAGCTaGGCCGGGCTGCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWFWASS*AGLPLS
Trigger: AGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGGAACCCCTCCACCTTTaGCAGCTCCCCAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKEPLHL*QLPKEG
Trigger: GCCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTC...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGAACCCCTCCACCTTTaGCAGCTCCCCAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLEPLHL*QLPKEG
Trigger: GCCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTC...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGTGGCCACCAAGGCTTTaGGCTGCACCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVWPPRL*AAPSPG
Trigger: CCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCA...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGCCTGCCCCTTGTCCATaGCCAGAACCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKPAPCP*PEPGHS
Trigger: ACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGG...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCGCTCCTGGCCTCGGATaGCCAGGACTCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSAPGLG*PGLCPE
Trigger: TTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGC...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCACCACAGAGGTGTTCTaGACCCAGGCCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GEMGPARADLCIARSFRLTTEVF*TQASWG
Trigger: GCCCCAGGAGGCCTGGGTGCAGAACACCTCTGTGGT...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATCCCTGCCGTATTGGATaGTGTCCTTTCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PQQPTGQGGLPCPGPANDPCRIG*CPFLLA
Trigger: GGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGG...ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAARAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGCCTGGGTTCGGAATaGCCGGACCACTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWGLGSE*PDHCAA
Trigger: GGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCC...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCAGGGCTTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QPNGLETAEEPEDPATQGLKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...GCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAGATCCCACCCTCAGCTaGCTCCTGGAGCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVDPTLS*LLEPQQ
Trigger: CTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATC...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGATCCCACCCTCAGCTaGCTCCTGGAGCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCVDLEGHALHSQRELRSDPTLS*LLEPQQ
Trigger: CTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATC...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGCTGGAGCGCAGTGTGTaGAGCCCCACGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLLERSV*SPTWAM
Trigger: CATTGCCCACGTGGGGCTGCACACACTGCGCTCCAG...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGIASSE*SCSRSR
Trigger: CCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGCACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTCACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AAQIASSECSCSRSRFIRASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCCTCCCGAGCATGGCCTaGATCTGCAGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSLPSMA*ICSSVP
Trigger: TGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAG...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCCGCTCTCTGCCACCTaGCCCTTGTCCATGACCAGA +
Preference number: 4 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQPLSAT*PLSMTR
Trigger: TCTGGTCATGGACAAGGGGCAGGTGGCAGAGAGCGG...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCGGGCTGCCGCTCTCTaGCACCTGCCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGRAAAL*HLPLVH
Trigger: ATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCG...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGGGAGCCTGGGCATGTaGTTGAGGCCCCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGGSLGM*LRPPGE
Trigger: CTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCCATCACCCACCGCACTaGCCTTTCTGGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSHHPPH*PFWSRW
Trigger: CCAGCGGCTCCAGAAAGGCCAGTGCGGTGGGTGATG...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGAAGGCGCCCAGCTCCTaGCCTCGGATGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGKAPSS*PRMPRT
Trigger: AGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTT...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGCTTCCCTGCCCCCACTaGACCGACAACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWLPCPH*TDNSQQ
Trigger: CTGCTGGCTGTTGTCGGTCCAGTGGGGGCAGGGAAG...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTTCCCTGCCCCCACTaGACCGACAACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQLPCPH*TDNSQQ
Trigger: CTGCTGGCTGTTGTCGGTCCAGTGGGGGCAGGGAAG...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCCACAAAGGGGGCCTaGGTTCGGAATGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWATKGA*VRNART
Trigger: GGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGC...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCAGTGTCTGGGTCACCTaGAGGGCAGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCSVWVT*RAAETE
Trigger: CTCTGTCTCTGCTGCCCTCCAGGTGACCCAGACACT...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGCACAGGAGCTGTTTCTaGCCCACGCTCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRHRSCF*PTLRSS
Trigger: CGAGGACCTGAGCGTGGGCCAGAAACAGCTCCTGTG...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: REDFPAPVLPTMPTFSPATSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
3UTR CAA 72 bp GCTGCAAACACCAGGCCATTCCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGTCAGCCACCAGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: AANTRPFPRSST*AASHLSATSRG
Trigger: CCCGCGACTGGTGGCTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622290.4
CDS-3UTR TCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCCACAGCCCGTTaGGGTAGAGGACGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVAATAR*GRGRSR
Trigger: CCGAGAGCGTCCTCTACCTCAACGGGCTGTGGCTGC...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGGTGAGCCGTGCCCGTaGGTCCTTCTGCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: DARAPPRSTAAMEANSPMGEPCP*VLLPHL
Trigger: CAAATGAGGCAGAAGGACTCACGGGCACGGCTCACC...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGAGCCCTGGGGCACCGTaGGGTTTATTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRSPGAP*GLFCGG
Trigger: GCCTCCACAGAATAAACCTCACGGTGCCCCAGGGCT...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGAGCCCTGGGGCACCGTaGGGTTTATTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWSPGAP*GLFCGG
Trigger: GCCTCCACAGAATAAACCTCACGGTGCCCCAGGGCT...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCGCCCTGCTCCCCAATTaGAGTGTGGATTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGALLPN*SVDSLR
Trigger: CCTGAGGGAATCCACACTTCAATTGGGGAGCAGGGC...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCGCCCTGCTCCCCAATTaGAGTGTGGATTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSALLPN*SVDSLR
Trigger: CCTGAGGGAATCCACACTTCAATTGGGGAGCAGGGC...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGGTCCTTCTCAGGGACTaGCTTGATGGACCTCTCGCG +
Preference number: 4 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQVLLRD*LDGPLA
Trigger: CGCGAGAGGTCCATCAAGTCAGTCCCTGAGAAGGAC...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCAAGCGGTTTAGCAGGTaGCCAATGGGTGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCKRFSR*PMGVRS
Trigger: TGAGCGGACACCCATTGGTCACCTGCTAAACCGCTT...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGAGACGAGTAGCTGGCTaGCTCCAAGCGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRRRVAG*LQASQL
Trigger: CAGCTGAGACGCTTGGAGTCAGCCAGCTACTCGTCT...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLLLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGCTCCTGGCCTCGGATaGCCAGGACTCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLAPGLG*PGLCPE
Trigger: TTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGC...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTGCCAGGCTCAGCCGCTaGTTCTGGCCTCCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSARLSR*FWPPER
Trigger: TCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGC...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTCCTGCCTGCAGAGGTaGCTCTGGGGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSCLQR*LWGPWC
Trigger: GCACCAAGGACCCCAGAGGCACCTCTGCAGGCAGGA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCACTCGGGCCTCCTGCCTaGAGAGGTGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: IASSECSCSRSRFIRREPLGPPA*RGASGV
Trigger: GACCCCAGAGGCACCTCTGCAGGCAGGAGGCCCGAG...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGTCCTGCTGGCCATCCTaGCCTGTCAGGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLSCWPS*PVRVIQ
Trigger: CTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGA...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTCCTGCTGGCCATCCTaGCCTGTCAGGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSSCWPS*PVRVIQ
Trigger: CTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGA...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAAQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCATGCCCGGACCACTGTaGTGCCCTGGAACGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GEMGPARADLCIARSFRLMPGPL*CPGTSQ
Trigger: CTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCAT...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGTTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVLKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: MTRTRAQSITERRRWAMSSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: SRAAQIASSECSCSRSRFQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAGATCCCACCCTCAGCTaGCTCCTGGAGCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARDPTLS*LLEPQQ
Trigger: CTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATC...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCCTGGAGCGCAGTGTGTaGAGCCCCACGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSLERSV*SPTWAM
Trigger: CATTGCCCACGTGGGGCTGCACACACTGCGCTCCAG...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQIASSE*SCSRSR
Trigger: CCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGCTCCCGAGCATGGCCTaGATCTGCAGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SCVDLEGHALHSQRELRSLPSMA*ICSSVP
Trigger: TGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAG...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGGGGCGAGATGGGCCCTaGCCGGGCAGACCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRGRDGP*PGRPVY
Trigger: ATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCC...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCACCTTTCTGGAGCCGCTaGACAGAGCCAGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: QLPSMACICSSVPGSTAAPFWSR*TEPGPF
Trigger: GAAAGGTCCTGGCTCTGTCCAGCGGCTCCAGAAAGG...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGAAGGACACCCGGGCCTaGACGAGGGAGTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGKDTRA*TREWME
Trigger: CTCCATCCACTCCCTCGTCCAGGCCCGGGTGTCCTT...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGCCTGGGGCAGGATGTaGAGTGCGTGCGTCACGAGA +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSAWGRM*SACVTR
Trigger: TCTCGTGACGCACGCACTCCACATCCTGCCCCAGGC...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCTGTCCTTTCCTGCTaGCCATCCTGCCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWAVLSC*PSCPVR
Trigger: CCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGC...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGAACAGCCCAATGGCTTaGAGACAGCCGAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQNSPMA*RQPRSP
Trigger: CGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTT...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGTCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVSREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSSREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATAACAGGATGGGGTCCTaGGGGATGATGCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: PQQPTGQGGLPCPGPANDNRMGS*GMMLIL
Trigger: CAGGATCAGCATCATCCCCCAGGACCCCATCCTGTT...ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGCACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVHLYCS*PGRLAT
Trigger: GGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTG...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGCACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPHLYCS*PGRLAT
Trigger: GGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTG...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAATSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCACGGAGCGCAGGCGGTaGGCAATGAGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SRAAQIASSECSCSRSRFTERRR*AMSSTV
Trigger: CACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGT...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTACGGAGCGCAGGCGGTaGGCAATGAGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAATERRR*AMSSTV
Trigger: CACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGT...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGACATTGGCTGCAGGGTaGACAGGGCGAGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWTLAAG*TGRDGP
Trigger: GGGCCCATCTCGCCCTGTCCACCCTGCAGCCAATGT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp CTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGAGCAGCCACAGCCCGTTaGGGTAGAGGACGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LGAPQPWRQTAQWLGDSRAATAR*GRGRSR
Trigger: CCGAGAGCGTCCTCTACCTCAACGGGCTGTGGCTGC...TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGGTGAGCCGTGCCCGTaGGTCCTTCTGCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: SCVDLEGHALHSQRELRSGEPCP*VLLPHL
Trigger: CAAATGAGGCAGAAGGACTCACGGGCACGGCTCACC...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAGGTGAGCCGTGCCCGTaGGTCCTTCTGCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVGEPCP*VLLPHL
Trigger: CAAATGAGGCAGAAGGACTCACGGGCACGGCTCACC...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGCCAGGCAGAGGAAGGTaGCCAGACGGTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWPGRGR*PDGQRT
Trigger: TGTCCTTTGACCGTCTGGTCACCTTCCTCTGCCTGG...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGAGCCCTGGGGCACCGTaGGGTTTATTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSPGAP*GLFCGG
Trigger: GCCTCCACAGAATAAACCTCACGGTGCCCCAGGGCT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCGTCCTTCTCAGGGACTaGCTTGATGGACCTCTCGCG +
Preference number: 4 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSVLLRD*LDGPLA
Trigger: CGCGAGAGGTCCATCAAGTCAGTCCCTGAGAAGGAC...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAALLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTTGGCCACCAAGGCTTTaGGCTGCACCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGWPPRL*AAPSPG
Trigger: CCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCA...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCCTGCCCCTTGTCCATaGCCAGAACCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGPAPCP*PEPGHS
Trigger: ACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGG...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAGCTCCTGGCCTCGGATaGCCAGGACTCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVAPGLG*PGLCPE
Trigger: TTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGC...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTACAGGGAGGACTTCCCTaGCCCCACTGGACCGACAAC +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVQGGLP*PHWTDN
Trigger: GTTGTCGGTCCAGTGGGGGCAGGGAAGTCCTCCCTG...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGACCACAGAGGTGTTCTaGACCCAGGCCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVTTEVF*TQASWG
Trigger: GCCCCAGGAGGCCTGGGTGCAGAACACCTCTGTGGT...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGGGTGGGTCCAGCTCCTaGCCGAAGCACACATTCTCT +
Preference number: 4 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQGGSSS*PKHTFS
Trigger: AGAGAATGTGTGCTTCGGGCAGGAGCTGGACCCACC...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGGGTGGGTCCAGCTCCTaGCCGAAGCACACATTCTCT +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKGGSSS*PKHTFS
Trigger: AGAGAATGTGTGCTTCGGGCAGGAGCTGGACCCACC...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCACTGTCCACATCTGGCTaGAGGGCACAGGCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: QLPSMACICSSVPGSTAALSTSG*RAQASS
Trigger: ACTAGAAGCCTGTGCCCTGCAGCCAGATGTGGACAG...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGGCAGGATGTGGAGTaGGTGCGTCACGAGAATCCG +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWGQDVE*VRHENP
Trigger: CGGATTCTCGTGACGCACGCACTCCACATCCTGCCC...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTCCTGCCTGCAGAGGTaGCTCTGGGGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPSCLQR*LWGPWC
Trigger: GCACCAAGGACCCCAGAGGCACCTCTGCAGGCAGGA...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCAGCTGCCTGCGTCTGCTaGCCACCTACTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: IASSECSCSRSRFIRREPAACVC*PPTAGS
Trigger: CGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGC...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGTTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTATTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVLKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCCCGGAGAAGGGCACGTaGCAGACACAGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GEMGPARADLCIARSFRLPEKGT*QTQELF
Trigger: AAACAGCTCCTGTGTCTGGCACGTGCCCTTCTCCGG...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCAGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IASSECSCSRSRFIRREPASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGSMACI*SSVPGS
Trigger: GGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCT...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVSMACI*SSVPGS
Trigger: GGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCT...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPSMACI*SSVPGS
Trigger: GGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCT...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARSMACI*SSVPGS
Trigger: GGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCT...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGCTCCCGAGCATGGCCTaGATCTGCAGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRLPSMA*ICSSVP
Trigger: TGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAG...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCATCACCCACCGCACTaGCCTTTCTGGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVHHPPH*PFWSRW
Trigger: CCAGCGGCTCCAGAAAGGCCAGTGCGGTGGGTGATG...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAAAGGACACCCGGGCCTaGACGAGGGAGTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARKDTRA*TREWME
Trigger: CTCCATCCACTCCCTCGTCCAGGCCCGGGTGTCCTT...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCGCCAGCAGACAGCCCTaGGGCACCGTGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSASRQP*GTVRFI
Trigger: AATAAACCTCACGGTGCCCCAGGGCTGTCTGCTGGC...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGGAAGCTGTCCACATCTaGCTGCAGGGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: REDFPAPVLPTMPTFSPAEAVHI*LQGTGF
Trigger: GAAGCCTGTGCCCTGCAGCCAGATGTGGACAGCTTC...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGGTTGAAGACATGCTaGCCAACGTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSWLKTC*PTWASR
Trigger: CCTGGATGCCCACGTTGGCCAGCATGTCTTCAACCA...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCCCAGGCCCAATGACCTaGTTGAAGACATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGPGPMT*LKTCWP
Trigger: TGGCCAGCATGTCTTCAACCAGGTCATTGGGCCTGG...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTACTGCAGAGGTGCCTCTaGGGTCCTTGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVLQRCL*GPWCWS
Trigger: GGACCAGCACCAAGGACCCCAGAGGCACCTCTGCAG...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCAGGCAAACAGCCCAATaGCTTGGAGACAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSRQTAQ*LGDSRG
Trigger: TCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCT...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSGAPQP*RQTAQW
Trigger: CCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCC...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: MTRTRAQSITERRRWAMSSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGTCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRSHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGGCCACAAAGGGGGCCTaGGTTCGGAATGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGATKGA*VRNART
Trigger: GGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGC...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGTCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWSAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRAAQIASSECSCSRSRFTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCACAGGAGCTGTTTCTaGCCCACGCTCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGHRSCF*PTLRSS
Trigger: CGAGGACCTGAGCGTGGGCCAGAAACAGCTCCTGTG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAACGGAGCGCAGGCGGTaGGCAATGAGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARTERRR*AMSSTV
Trigger: CACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGT...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTACGGAGCGCAGGCGGTaGGCAATGAGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGTERRR*AMSSTV
Trigger: CACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGT...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGACATTGGCTGCAGGGTaGACAGGGCGAGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRTLAAG*TGRDGP
Trigger: GGGCCCATCTCGCCCTGTCCACCCTGCAGCCAATGT...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCTGGAGAACAGAGCATaGTCACTGGGGGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGLENRA*SLGAGA
Trigger: CGCTCCTGCCCCCAGTGACCATGCTCTGTTCTCCAG...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGGCAGGATGGCCACAGTaGCAGTGGGGTAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRAGWPQ*QWGSHC
Trigger: GCAGTGGCTACCCCACTGCCACTGTGGCCATCCTGC...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638420.1
CDS-3UTR TCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGGCAGCCACAGCCCGTTaGGGTAGAGGACGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLAATAR*GRGRSR
Trigger: CCGAGAGCGTCCTCTACCTCAACGGGCTGTGGCTGC...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGCCAGGCAGAGGAAGGTaGCCAGACGGTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWPGRGR*PDGQRT
Trigger: TGTCCTTTGACCGTCTGGTCACCTTCCTCTGCCTGG...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTGCCCTGCTCCCCAATTaGAGTGTGGATTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAAALLPN*SVDSLR
Trigger: CCTGAGGGAATCCACACTTCAATTGGGGAGCAGGGC...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGCTCTGTCTGGGCTTCTaGAGTGGTACGGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQLCLGF*SGTVLL
Trigger: GAGAAGGACCGTACCACTTCAGAAGCCCAGACAGAG...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGAAGCGGTTTAGCAGGTaGCCAATGGGTGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQKRFSR*PMGVRS
Trigger: TGAGCGGACACCCATTGGTCACCTGCTAAACCGCTT...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGCCAGTCGCGGGAAACTaGTCCTCTGGCTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRPVAGN*SSGFHL
Trigger: TAGATGAAAGCCAGAGGATCAGTTTCCCGCGACTGG...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGACTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARLLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGCAGCCTCAGAGATTCTaGTTTAAGGGTCTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRQPQRF*FKGLAG
Trigger: CCCGGCTAGACCCTTAAATCAGAATCTCTGAGGCTG...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCGGACAGGGGTTAGACTaGTGGGGGTCTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRAAQIASSECSCSRSRFGQGLD*WGSSGK
Trigger: CTTCCCTGAAGACCCCCAGCAGTCTAACCCCTGTCC...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGGCTCCTGGCCTCGGATaGCCAGGACTCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRAPGLG*PGLCPE
Trigger: TTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGC...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCAACCACAGAGGTGTTCTaGACCCAGGCCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IASSECSCSRSRFIRREPTTEVF*TQASWG
Trigger: GCCCCAGGAGGCCTGGGTGCAGAACACCTCTGTGGT...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGTGGGTCCAGCTCCTaGCCGAAGCACACATTCTCT +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSGGSSS*PKHTFS
Trigger: AGAGAATGTGTGCTTCGGGCAGGAGCTGGACCCACC...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCCTCCGGAGAGATTCATaGCCTGCTCCCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSLRRDS*PAPQLK
Trigger: CTTCAATTGGGGAGCAGGGCATGAATCTCTCCGGAG...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAAGCCAGGCTCAGCCGCTaGTTCTGGCCTCCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEARLSR*FWPPER
Trigger: TCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGC...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGCTCTGGGGTCCTTGGTaGTGGTCCCAGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKLWGPW*WSQVLF
Trigger: AAACAGAACCTGGGACCAGCACCAAGGACCCCAGAG...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGATGCTGTCCTTTCCTaGTGGCCATCCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSDAVLS*WPSCPV
Trigger: GACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATC...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGGATGCTGTCCTTTCCTaGTGGCCATCCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGDAVLS*WPSCPV
Trigger: GACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATC...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGTTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QLPSMACICSSVPGSTAAAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...TGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSSSECS*SRSRFI
Trigger: GATGAACCTCGACCTGCTGCAGGAGCACTCGGACGA...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCCGGAGAAGGGCACGTaGCAGACACAGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGPEKGT*QTQELF
Trigger: AAACAGCTCCTGTGTCTGGCACGTGCCCTTCTCCGG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GCAAACAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCCCGGAGAAGGGCACGTaGCAGACACAGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: ANSPMAWRQPRSPKIPPRPEKGT*QTQELF
Trigger: AAACAGCTCCTGTGTCTGGCACGTGCCCTTCTCCGG...GCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTCCCGAGCATGGCCTaGATCTGCAGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGLPSMA*ICSSVP
Trigger: TGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAG...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTACCGCTCTCTGCCACCTaGCCCTTGTCCATGACCAGA +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVPLSAT*PLSMTR
Trigger: TCTGGTCATGGACAAGGGGCAGGTGGCAGAGAGCGG...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTTCCATCTCCAGCACTaGAGGCTGTGCGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRFHLQH*RLCGLV
Trigger: GACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAA...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGACCGCACTGGCCTTTCTaGAGCCGCTGGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGAPQPWRQTAQWLGDSRPHWPF*SRWTEP
Trigger: TGGCTCTGTCCAGCGGCTCCAGAAAGGCCAGTGCGG...TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTCCCTCCCAGCCATaGAACTTGATGGTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQAPSQP*NLMVFE
Trigger: CTCGAAGACCATCAAGTTCCATGGCTGGGAGGGAGC...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCAAGGGCAGGAAAGCCTaGGCCTTGTTGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLPCPGPANDAHLLSKGRKA*ALLRML
Trigger: CAACATCCTCAACAAGGCCCAGGCTTTCCTGCCCTT...GGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGAAGGGCAGGAAAGCCTaGGCCTTGTTGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQKGRKA*ALLRML
Trigger: CAACATCCTCAACAAGGCCCAGGCTTTCCTGCCCTT...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCAAACAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCGAAGCTGTCCACATCTaGCTGCAGGGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ANSPMAWRQPRSPKIPPREAVHI*LQGTGF
Trigger: GAAGCCTGTGCCCTGCAGCCAGATGTGGACAGCTTC...GCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCTCCCCAATTGAAGTGTaGATTCCCTCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCSPIEV*IPSGKL
Trigger: CAGCTTCCCTGAGGGAATCCACACTTCAATTGGGGA...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCCTCAGCCGCTGCTTCTaGCCTCCGGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSLSRCF*PPERFM
Trigger: CATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAG...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCTCAGCCGCTGCTTCTaGCCTCCGGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGLSRCF*PPERFM
Trigger: CATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCACATGCTGGCCAACGTaGGCATCCAGGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSTCWPT*ASRAAR
Trigger: CCTGGCGGCCCTGGATGCCCACGTTGGCCAGCATGT...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTGGTTGAAGACATGCTaGCCAACGTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSWLKTC*PTWASR
Trigger: CCTGGATGCCCACGTTGGCCAGCATGTCTTCAACCA...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGCCAGGCCCAATGACCTaGTTGAAGACATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLPGPMT*LKTCWP
Trigger: TGGCCAGCATGTCTTCAACCAGGTCATTGGGCCTGG...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGAACAGCCCAATGGCTTaGAGACAGCCGAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRNSPMA*RQPRSP
Trigger: CGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTT...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGAGGCAAACAGCCCAATaGCTTGGAGACAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQRQTAQ*LGDSRG
Trigger: TCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCT...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVGAPQP*RQTAQW
Trigger: CCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCC...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTATCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVSHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTTCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAASHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCTCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSSHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 4 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGACCACTGTGCTGCCCTaGAACGTCTCAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWTTVLP*NVSAMW
Trigger: CCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCTCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: SRAAQIASSECSCSRSRFSAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGCACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLHLYCS*PGRLAT
Trigger: GGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTG...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCACAGGAGCTGTTTCTaGCCCACGCTCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVHRSCF*PTLRSS
Trigger: CGAGGACCTGAGCGTGGGCCAGAAACAGCTCCTGTG...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCCACCAAGTCCAGGATGAGGATCTaGGTCTTCCGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPRSAHLYCSWPGRLATKSRMRI*VFRRRA
Trigger: TGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGA...CTTGGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTCCAGGATGAGGATCTaGGTCTTCCGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSSRMRI*VFRRRA
Trigger: TGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGA...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGGCAGGCTGTGCGGGCTaGTCCAACTGGGGTACGGTT +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGAGCAG*SNWGTV
Trigger: AACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGC...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGAAACAGTGGCAGGATaGCCACAGTGGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGETVAG*PQWQWG
Trigger: ACCCCACTGCCACTGTGGCCATCCTGCCACTGTTTC...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638420.1
3UTR CAA 72 bp CTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LPTMPTFSPAWI*KDTPCTASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
CDS-3UTR TCA 90 bp CCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATCTCATTTGCTCCTCCTaGTGGTGGTTCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PQQPTGQGGLPCPGPANDLICSS*WWFLFL
Trigger: CAAGAAAAGGAACCACCATCAGGAGGAGCAAATGAG...ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGAGCCCTGGGGCACCGTaGGGTTTATTCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGSPGAP*GLFCGG
Trigger: GCCTCCACAGAATAAACCTCACGGTGCCCCAGGGCT...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAGTCCTTCTCAGGGACTaGCTTGATGGACCTCTCGCG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARVLLRD*LDGPLA
Trigger: CGCGAGAGGTCCATCAAGTCAGTCCCTGAGAAGGAC...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GCAAACAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCCTCTGTCTGGGCTTCTaGAGTGGTACGGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ANSPMAWRQPRSPKIPPRLCLGF*SGTVLL
Trigger: GAGAAGGACCGTACCACTTCAGAAGCCCAGACAGAG...GCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAAAGCGGTTTAGCAGGTaGCCAATGGGTGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVKRFSR*PMGVRS
Trigger: TGAGCGGACACCCATTGGTCACCTGCTAAACCGCTT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAGCGTCTCAGCTGGCATaGGCTAACCACATACAGGCT +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVASQLA*ANHIQA
Trigger: AGCCTGTATGTGGTTAGCTCATGCCAGCTGAGACGC...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGLLRGS*RTRPAQ
Trigger: CTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAG...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTGGACAGGGGTTAGACTaGTGGGGGTCTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGGQGLD*WGSSGK
Trigger: CTTCCCTGAAGACCCCCAGCAGTCTAACCCCTGTCC...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGGACAGGGGTTAGACTaGTGGGGGTCTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: EKPTRPALRWALLSTAHVGQGLD*WGSSGK
Trigger: CTTCCCTGAAGACCCCCAGCAGTCTAACCCCTGTCC...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGACCACAGAGGTGTTCTaGACCCAGGCCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLTTEVF*TQASWG
Trigger: GCCCCAGGAGGCCTGGGTGCAGAACACCTCTGTGGT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGCTCCGGAGAGATTCATaGCCTGCTCCCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: REDFPAPVLPTMPTFSPALRRDS*PAPQLK
Trigger: CTTCAATTGGGGAGCAGGGCATGAATCTCTCCGGAG...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGCAGCAGGTACACAGCTaGCTTTCTGTATACAGCCCG +
Preference number: 4 (lower is better)
Translates to: DARAPPRSTAAMEANSPMQQVHS*LSVYSP
Trigger: CGGGCTGTATACAGAAAGGCAGCTGTGTACCTGCTG...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAACCTGGTTGAAGACATaGTGGCCAACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVTWLKT*WPTWAS
Trigger: GGATGCCCACGTTGGCCAGCATGTCTTCAACCAGGT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGACCTGGTTGAAGACATaGTGGCCAACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGTWLKT*WPTWAS
Trigger: GGATGCCCACGTTGGCCAGCATGTCTTCAACCAGGT...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAGTAGGAACCCATCTCTaGGATGGCCCCATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVVGTHL*DGPICQ
Trigger: CTGGCAAATGGGGCCATCGCAGAGATGGGTTCCTAC...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCCTCTGGGGTCCTTGGTaGTGGTCCCAGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSLWGPW*WSQVLF
Trigger: AAACAGAACCTGGGACCAGCACCAAGGACCCCAGAG...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTGATGCTGTCCTTTCCTaGTGGCCATCCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSDAVLS*WPSCPV
Trigger: GACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATC...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCACCCGGACCACTGTGCTaGCCTGGAACGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GHLVFVSLELISGGGGGAPGPLC*PGTSQP
Trigger: TGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGG...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSLGLSS*EQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAG...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRLGLSS*EQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAG...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVSSECS*SRSRFI
Trigger: GATGAACCTCGACCTGCTGCAGGAGCACTCGGACGA...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSSSECS*SRSRFI
Trigger: GATGAACCTCGACCTGCTGCAGGAGCACTCGGACGA...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRSSECS*SRSRFI
Trigger: GATGAACCTCGACCTGCTGCAGGAGCACTCGGACGA...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGCACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGAGCATGGCCTGCATCTaGAGCTCCGTGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLSMACI*SSVPGS
Trigger: GGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTGCTGTTGACATTGGCTaGAGGGTGGACAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGAVDIG*RVDRAR
Trigger: TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGC...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCTCGGCCACCAGAGTGTaGACAGCAAACACCACCAGT +
Preference number: 4 (lower is better)
Translates to: AAQIASSECSCSRSRFIRSATRV*TANTTS
Trigger: ACTGGTGGTGTTTGCTGTCCACACTCTGGTGGCCGA...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAACAGGGAGGGCTTTCCTaGGACCAGGCGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEQGGLS*DQAKVA
Trigger: TGCCACCTTCGCCTGGTCCCAGGAAAGCCCTCCCTG...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCACAGGGAGGGCTTTCCTaGGACCAGGCGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GHLVFVSLELISGGGGGAQGGLS*DQAKVA
Trigger: TGCCACCTTCGCCTGGTCCCAGGAAAGCCCTCCCTG...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGGCCAGCAGACAGCCCTaGGGCACCGTGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPASRQP*GTVRFI
Trigger: AATAAACCTCACGGTGCCCCAGGGCTGTCTGCTGGC...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGCTCAGCCGCTGCTTCTaGCCTCCGGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPLSRCF*PPERFM
Trigger: CATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAG...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGATGATCCAATCAGCCTaGGGCAGGATGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWMIQSA*GRMWSA
Trigger: CGCACTCCACATCCTGCCCCAGGCTGATTGGATCAT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGTCTGGGCTTCTGAAGTaGTACGGTCCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVSGLLK*YGPSQG
Trigger: TCCCTGAGAAGGACCGTACCACTTCAGAAGCCCAGA...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCAGAGGAACCTCTGTCTaGGCTTCTGAAGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: GEMGPARADLCIARSFRLRGTSV*ASEVVR
Trigger: CCGTACCACTTCAGAAGCCCAGACAGAGGTTCCTCT...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGAGAGGAACCTCTGTCTaGGCTTCTGAAGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: DARAPPRSTAAMEANSPMRGTSV*ASEVVR
Trigger: CCGTACCACTTCAGAAGCCCAGACAGAGGTTCCTCT...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCAGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: IASSECSCSRSRFIRREPGAPQP*RQTAQW
Trigger: CCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCC...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 4 (lower is better)
Translates to: PGPHLGAPQPWRQTAQWLGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...AAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTCCAAGCGTCTCAGCTaGCATGAGCTAACCACATAC +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGSKRLS*HELTTY
Trigger: GTATGTGGTTAGCTCATGCCAGCTGAGACGCTTGGA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTAAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGRPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGAGTGTCTGGGTCACCTaGAGGGCAGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPSVWVT*RAAETE
Trigger: CTCTGTCTCTGCTGCCCTCCAGGTGACCCAGACACT...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGAACAGGATGGGGTCCTaGGGGATGATGCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SCVDLEGHALHSQRELRSNRMGS*GMMLIL
Trigger: CAGGATCAGCATCATCCCCCAGGACCCCATCCTGTT...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTATCCAGGATGAGGATCTaGGTCTTCCGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVSRMRI*VFRRRA
Trigger: TGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGA...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGTGGGGTCCTTGGTGCTaGTCCCAGGTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQWGPWC*SQVLFC
Trigger: ACAAAACAGAACCTGGGACCAGCACCAAGGACCCCA...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
3UTR CAA 72 bp GCTGCAAACACCAGGCCATTCCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGAAACCCAGCGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: AANTRPFPRSST*AASHLKPSVEE
Trigger: CTCCTCTACGCTGGGTTTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp ATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGAGAGCCACCAGGCAGAGGAAGGTaGCCAGACGGTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: IASSECSCSRSRFIRREPPGRGR*PDGQRT
Trigger: TGTCCTTTGACCGTCTGGTCACCTTCCTCTGCCTGG...TGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGCTCTGTCTGGGCTTCTaGAGTGGTACGGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRLCLGF*SGTVLL
Trigger: GAGAAGGACCGTACCACTTCAGAAGCCCAGACAGAG...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGC +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWRSFRL*CSVIIG
Trigger: GCCAATTATCACAGAGCATCAGAGCCGGAAGGACCT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAACCACAGCACCCTCGATaGTCACGAACCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEPQHPR*SRTPPP
Trigger: AGGTGGAGGGGTTCGTGAGCATCGAGGGTGCTGTGG...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCCAGCAGGTACACAGCTaGCTTTCTGTATACAGCCCG +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSQQVHS*LSVYSP
Trigger: CGGGCTGTATACAGAAAGGCAGCTGTGTACCTGCTG...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTACCTGGTTGAAGACATaGTGGCCAACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGTWLKT*WPTWAS
Trigger: GGATGCCCACGTTGGCCAGCATGTCTTCAACCAGGT...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGACCTGGTTGAAGACATaGTGGCCAACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVTWLKT*WPTWAS
Trigger: GGATGCCCACGTTGGCCAGCATGTCTTCAACCAGGT...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAAGGATGTGGAGTGCGTaGGTCACGAGAATCCGTGTT +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVRMWSA*VTRIRV
Trigger: AACACGGATTCTCGTGACGCACGCACTCCACATCCT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTCCTGCTGGCCATCCTaGCCTGTCAGGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLSCWPS*PVRVIQ
Trigger: CTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGA...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGCCCTGCCGTATTGGATaGTGTCCTTTCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKPCRIG*CPFLLA
Trigger: GGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGG...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp TGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTACTGTGGCCTTCACCCTaGCGTATTGGATGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CVDLEGHALHSQRELRSVLWPSP*RIGCCP
Trigger: AGGACAGCATCCAATACGGCAGGGTGAAGGCCACAG...TACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGACAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAAGGCTTTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGFELHRLQGCPDSLVRVQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...CACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAAAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAAAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLIASSE*SCSRSR
Trigger: CCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGGGGCGAGATGGGCCCTaGCCGGGCAGACCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRGRDGP*PGRPVY
Trigger: ATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCC...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAGCTCCCTCCCAGCCATaGAACTTGATGGTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARAPSQP*NLMVFE
Trigger: CTCGAAGACCATCAAGTTCCATGGCTGGGAGGGAGC...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGAAGGCGCCCAGCTCCTaGCCTCGGATGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRKAPSS*PRMPRT
Trigger: AGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTT...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCAAGGGCAGGAAAGCCTaGGCCTTGTTGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSKGRKA*ALLRML
Trigger: CAACATCCTCAACAAGGCCCAGGCTTTCCTGCCCTT...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCGTGAGGTTTATTCTGTaGAGGCAGGGAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRAAQIASSECSCSRSRFVRFIL*RQGGLS
Trigger: GGAAAGCCCTCCCTGCCTCCACAGAATAAACCTCAC...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGATGGTTGAAGACATGCTaGCCAACGTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARWLKTC*PTWASR
Trigger: CCTGGATGCCCACGTTGGCCAGCATGTCTTCAACCA...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCCAGGCCCAATGACCTaGTTGAAGACATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGPGPMT*LKTCWP
Trigger: TGGCCAGCATGTCTTCAACCAGGTCATTGGGCCTGG...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTCTGGGCTTCTGAAGTaGTACGGTCCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSGLLK*YGPSQG
Trigger: TCCCTGAGAAGGACCGTACCACTTCAGAAGCCCAGA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCAGAGGAACCTCTGTCTaGGCTTCTGAAGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: MTRTRAQSITERRRWAMSRGTSV*ASEVVR
Trigger: CCGTACCACTTCAGAAGCCCAGACAGAGGTTCCTCT...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAAGCTGTCCTTTCCTGCTaGCCATCCTGCCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEAVLSC*PSCPVR
Trigger: CCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGC...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTTCACCCTGCCGTATTaGATGCTGTCCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSFTLPY*MLSFPA
Trigger: AGCAGGAAAGGACAGCATCCAATACGGCAGGGTGAA...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTTCACCCTGCCGTATTaGATGCTGTCCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: REDFPAPVLPTMPTFSPAFTLPY*MLSFPA
Trigger: AGCAGGAAAGGACAGCATCCAATACGGCAGGGTGAA...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGAACAGCCCAATGGCTTaGAGACAGCCGAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLNSPMA*RQPRSP
Trigger: CGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAAGACAGACGAGTAGCTaGCTGACTCCAAGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVRQTSS*LTPSVS
Trigger: TGAGACGCTTGGAGTCAGCCAGCTACTCGTCTGTCT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGTCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGSAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGAACAGGATGGGGTCCTaGGGGATGATGCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRNRMGS*GMMLIL
Trigger: CAGGATCAGCATCATCCCCCAGGACCCCATCCTGTT...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRHLYCS*PGRLAT
Trigger: GGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTG...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GCAAACAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCTGGGGTCCTTGGTGCTaGTCCCAGGTTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ANSPMAWRQPRSPKIPPRWGPWC*SQVLFC
Trigger: ACAAAACAGAACCTGGGACCAGCACCAAGGACCCCA...GCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGACATTTGCCAGCACTATaGTCCAATCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARHLPAL*SNQPGA
Trigger: TGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATG...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGCCTGCCCCTTGTCCATaGCCAGAACCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGPAPCP*PEPGHS
Trigger: ACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGG...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAAGGTCCTTCCGGCTCTaGTGCTCTGTGATAATTGGC +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARRSFRL*CSVIIG
Trigger: GCCAATTATCACAGAGCATCAGAGCCGGAAGGACCT...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCTGTGAATCAGGAACACTaGGAAGCTCATCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PTRPALRWALLSTAHVAAVNQEH*EAHRGE
Trigger: CTCACCACGATGAGCTTCGCAGTGTTCCTGATTCAC...AGCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGAGCAAACACCACCAGTaGGACCAGAAATGTAGACAC +
Preference number: 4 (lower is better)
Translates to: PLSMTRTRAQSITERRRWSKHHQ*DQKCRH
Trigger: GTGTCTACATTTCTGGTCGCACTGGTGGTGTTTGCT...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGACTCCGGAGAGATTCATaGCCTGCTCCCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARLRRDS*PAPQLK
Trigger: CTTCAATTGGGGAGCAGGGCATGAATCTCTCCGGAG...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGCCGCAAGCCACCTGAAACCCAGCGTAGAGGAGAAACAGTGGCAGGATGGCCACAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRKPPETQRRGETVAGWPQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...TGGCCATCCTGCCACTGTTTCTCCTCTACGCTGGGTTTCAGGTGGCTTGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGACTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARLGLSS*EQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAG...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTGCAGCTGGGCCGGGCTaGCGCTCTCTGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLAAGPG*RSLPPA
Trigger: GGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGC...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGAGCTCCCTCCCAGCCATaGAACTTGATGGTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LGAPQPWRQTAQWLGDSRAPSQP*NLMVFE
Trigger: CTCGAAGACCATCAAGTTCCATGGCTGGGAGGGAGC...TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGAAGGACACCCGGGCCTaGACGAGGGAGTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGKDTRA*TREWME
Trigger: CTCCATCCACTCCCTCGTCCAGGCCCGGGTGTCCTT...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCAGGAGCGAGAGTGATGGGTGTGGTCGGAAAATGGTGGTGGCTATTCCGTATCAAGGACACCCGGGCCTaGACGAGGGAGTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: AGARVMGVVGKWWWLFRIKDTRA*TREWME
Trigger: CTCCATCCACTCCCTCGTCCAGGCCCGGGTGTCCTT...GATACGGAATAGCCACCACCATTTTCCGACCACACCCATCACTCTCGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp GCACAGTGCACTGTGCAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGGTGAGGTTTATTCTGTaGAGGCAGGGAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: AQCTVQTSSRAWPASAAPVRFIL*RQGGLS
Trigger: GGAAAGCCCTCCCTGCCTCCACAGAATAAACCTCAC...CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TTGAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCTCCCCAATTGAAGTGTaGATTCCCTCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSCTVSRAAQIASSECSCSPIEV*IPSGKL
Trigger: CAGCTTCCCTGAGGGAATCCACACTTCAATTGGGGA...GCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGACCAGGCCCAATGACCTaGTTGAAGACATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGAPQPWRQTAQWLGDSRPGPMT*LKTCWP
Trigger: TGGCCAGCATGTCTTCAACCAGGTCATTGGGCCTGG...TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCTTCACCCTGCCGTATTaGATGCTGTCCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSFTLPY*MLSFPA
Trigger: AGCAGGAAAGGACAGCATCCAATACGGCAGGGTGAA...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTGGACCGGAGTTTGTCTaGAATGTCCACGTCAACCGT +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGGPEFV*NVHVNR
Trigger: ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCC...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGAAAGTACACACAGCATaGCAGTTCCCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGKVHTA*QFPASE
Trigger: CTCTGAGGCTGGGAACTGCCATGCTGTGTGTACTTT...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCTCATTTGCTCCTCCTaGTGGTGGTTCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGLICSS*WWFLFL
Trigger: CAAGAAAAGGAACCACCATCAGGAGGAGCAAATGAG...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGAAGCGGTTTAGCAGGTaGCCAATGGGTGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLKRFSR*PMGVRS
Trigger: TGAGCGGACACCCATTGGTCACCTGCTAAACCGCTT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGGCCTGGGCATGTGCTTaGGGCCCCCAGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGAWACA*GPQVSP
Trigger: TGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGC...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCAGCAAACACCACCAGTaGGACCAGAAATGTAGACAC +
Preference number: 4 (lower is better)
Translates to: AAQIASSECSCSRSRFIRSKHHQ*DQKCRH
Trigger: GTGTCTACATTTCTGGTCGCACTGGTGGTGTTTGCT...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCCACAAAGGCTTTCTCTaGATTCATAGCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSHKGFL*IHSILG
Trigger: GCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGTG...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGCACAAAGGCTTTCTCTaGATTCATAGCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQHKGFL*IHSILG
Trigger: GCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGTG...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCTGTCCACATCTGGCTaGAGGGCACAGGCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSLSTSG*RAQASS
Trigger: ACTAGAAGCCTGTGCCCTGCAGCCAGATGTGGACAG...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGATGCGATGGCCCCATTTaGCAGCACTATGATCCAATC +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARCDGPI*QHYDPI
Trigger: GATTGGATCATAGTGCTGGCAAATGGGGCCATCGCA...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCACTCGGGCCTCCTGCCTaGAGAGGTGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPLGPPA*RGASGV
Trigger: GACCCCAGAGGCACCTCTGCAGGCAGGAGGCCCGAG...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGRAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp CACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGGGCTTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTTGEQSMVTGGLKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...GCCCCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGIASSE*SCSRSR
Trigger: CCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAATTGGCCACTTTCTCTaGCATTTTCCTCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVIGHFL*HFPPRE
Trigger: CTCTCTGGGAGGAAAATGGCAGAGAAAGTGGCCAAT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCTCGGCCACCAGAGTGTaGACAGCAAACACCACCAGT +
Preference number: 4 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSSATRV*TANTTS
Trigger: ACTGGTGGTGTTTGCTGTCCACACTCTGGTGGCCGA...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCCCCAATTGAAGTGTaGATTCCCTCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRSPIEV*IPSGKL
Trigger: CAGCTTCCCTGAGGGAATCCACACTTCAATTGGGGA...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: ILKDTPCTASGSSGRYLSVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...GCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp GCAGGAGCGAGAGTGATGGGTGTGGTCGGAAAATGGTGGTGGCTATTCCGTATCACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGARVMGVVGKWWWLFRITHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...GATACGGAATAGCCACCACCATTTTCCGACCACACCCATCACTCTCGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACAGACAGCGATGGCAGTaGGGGCGGAGGGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHRQRWQ*GRRAPG
Trigger: TCCTGGGGCCCTCCGCCCTCACTGCCATCGCTGTCT...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGTCCTTTTCTTGGAGATaGAGAAATTCAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQSFSWR*RNSEGG
Trigger: TCCTCCCTCTGAATTTCTTCATCTCCAAGAAAAGGA...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp AGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCTCCTTTTCTTGGAGATaGAGAAATTCAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SCTVSRAAQIASSECSCSSFSWR*RNSEGG
Trigger: TCCTCCCTCTGAATTTCTTCATCTCCAAGAAAAGGA...GCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGGATCTCTCATTTGCTCCTCCTaGTGGTGGTTCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TSLPRSCQRCPPSLLRGSLICSS*WWFLFL
Trigger: CAAGAAAAGGAACCACCATCAGGAGGAGCAAATGAG...AGATCCACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR TCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGCATTTGCCAGCACTATaGTCCAATCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLHLPAL*SNQPGA
Trigger: TGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATG...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGGCCACCAAGGCTTTaGGCTGCACCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHWPPRL*AAPSPG
Trigger: CCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCA...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCACTTGAGGCCCCCAGGTaGGTCCAGAGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPLEAPR*VQSTAG
Trigger: CCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAG...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCACAGCCTCAGAGATTCTaGTTTAAGGGTCTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GHLVFVSLELISGGGGGAQPQRF*FKGLAG
Trigger: CCCGGCTAGACCCTTAAATCAGAATCTCTGAGGCTG...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTTCTTTAACTGCATGTaGGTCTGGGATTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGFFNCM*VWDYPK
Trigger: TTTGGGATAATCCCAGACTCACATGCAGTTAAAGAA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGGTGAATCAGGAACACTaGGAAGCTCATCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGVNQEH*EAHRGE
Trigger: CTCACCACGATGAGCTTCGCAGTGTTCCTGATTCAC...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGAGCAAACACCACCAGTaGGACCAGAAATGTAGACAC +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRSKHHQ*DQKCRH
Trigger: GTGTCTACATTTCTGGTCGCACTGGTGGTGTTTGCT...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAACAGCAGGTACACAGCTaGCTTTCTGTATACAGCCCG +
Preference number: 4 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEQQVHS*LSVYSP
Trigger: CGGGCTGTATACAGAAAGGCAGCTGTGTACCTGCTG...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLLGLSS*EQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAG...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGGCTCCACTGACACGATaGTGTTCTCTAGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLAPLTR*CSLGLS
Trigger: GGACAGACCTAGAGAACAGCATCGTGTCAGTGGAGC...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGGGCGCTGTTGACATTGGCTaGAGGGTGGACAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTTGEQSMVTGGAVDIG*RVDRAR
Trigger: TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGC...GCCCCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp GGGCACCTGGTTTTTGTGTCCTTGGAGCTCATCTCTGGTGGGGGAGGAGGAGCAGTGAGGTTTATTCTGTaGAGGCAGGGAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GHLVFVSLELISGGGGGAVRFIL*RQGGLS
Trigger: GGAAAGCCCTCCCTGCCTCCACAGAATAAACCTCAC...TGCTCCTCCTCCCCCACCAGAGATGAGCTCCAAGGACACAAAAACCAGGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGGAAGCTGTCCACATCTaGCTGCAGGGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCREAVHI*LQGTGF
Trigger: GAAGCCTGTGCCCTGCAGCCAGATGTGGACAGCTTC...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGTCCCCAATTGAAGTGTaGATTCCCTCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGSPIEV*IPSGKL
Trigger: CAGCTTCCCTGAGGGAATCCACACTTCAATTGGGGA...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTTATCTCCTGGCTGTCTaGCTTGATCCAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGYLLAV*LDPEDT
Trigger: TGTGTCTTCTGGATCAAGCCAGACAGCCAGGAGATA...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCTGCAGAGGTGCCTCTaGGGTCCTTGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHLQRCL*GPWCWS
Trigger: GGACCAGCACCAAGGACCCCAGAGGCACCTCTGCAG...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGGGGAAACTGATCCTCTaGCTTTCATCTACGCGAGCA +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGGKLIL*LSSTRA
Trigger: TGCTCGCGTAGATGAAAGCCAGAGGATCAGTTTCCC...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHTSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACACGGAGCGCAGGCGGTaGGCAATGAGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHTERRR*AMSSTV
Trigger: CACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGT...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGGTGTGGAGCTATCGATaGCCACGGGTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRVWSYR*PRVTSI
Trigger: GATGGAAGTGACCCGTGGTCATCGATAGCTCCACAC...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGCCACAGCACCCTCGATaGTCACGAACCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGPQHPR*SRTPPP
Trigger: AGGTGGAGGGGTTCGTGAGCATCGAGGGTGCTGTGG...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTGCCAGGCTCAGCCGCTaGTTCTGGCCTCCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAARLSR*FWPPER
Trigger: TCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGC...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGGGGCAGGATGTGGAGTaGGTGCGTCACGAGAATCCG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGGQDVE*VRHENP
Trigger: CGGATTCTCGTGACGCACGCACTCCACATCCTGCCC...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTGCTGCCTGCGTCTGCTaGCCACCTACTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAAACVC*PPTAGS
Trigger: CGACCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGC...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTAGGGCTGCCTGCGTCTaGTGCCCACCTACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDARAACV*CPPTAG
Trigger: CCCTGCAGTAGGTGGGCAGCAGACGCAGGCAGCCCT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCACCCGGACCACTGTGCTaGCCTGGAACGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPPGPLC*PGTSQP
Trigger: TGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGG...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGATGCCCGGACCACTGTaGTGCCCTGGAACGTCTCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGMPGPL*CPGTSQ
Trigger: CTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCAT...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTGATCCCACCCTCAGCTaGCTCCTGGAGCCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLDPTLS*LLEPQQ
Trigger: CTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATC...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACATAGCCTCGTCCGAGTaGTCCTGCAGCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHIASSE*SCSRSR
Trigger: CCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTAT...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCACACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTCAGCACACTTGTACTaGAGCTGGCCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHSAHLY*SWPGRL
Trigger: CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGA...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCGCTCTCTGCCACCTaGCCCTTGTCCATGACCAGA +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAPLSAT*PLSMTR
Trigger: TCTGGTCATGGACAAGGGGCAGGTGGCAGAGAGCGG...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCGGGCTGCCGCTCTCTaGCACCTGCCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLRAAAL*HLPLVH
Trigger: ATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACCGGGCTGCCGCTCTCTaGCACCTGCCCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHRAAAL*HLPLVH
Trigger: ATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCG...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGCAGCTGGGCCGGGCTaGCGCTCTCTGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVAAGPG*RSLPPA
Trigger: GGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTTCCATCTCCAGCACTaGAGGCTGTGCGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHFHLQH*RLCGLV
Trigger: GACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAA...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCACAGGGAGGGCTTTCCTaGGACCAGGCGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPQGGLS*DQAKVA
Trigger: TGCCACCTTCGCCTGGTCCCAGGAAAGCCCTCCCTG...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTACATGCTGGCCAACGTaGGCATCCAGGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDATCWPT*ASRAAR
Trigger: CCTGGCGGCCCTGGATGCCCACGTTGGCCAGCATGT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACACATGCTGGCCAACGTaGGCATCCAGGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHTCWPT*ASRAAR
Trigger: CCTGGCGGCCCTGGATGCCCACGTTGGCCAGCATGT...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCAGCTGTCCTTTCCTGCTaGCCATCCTGCCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAAVLSC*PSCPVR
Trigger: CCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGC...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRVEEKQ*QDGHSG
Trigger: GCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTAC...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCATCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPASREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPTSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
3UTR CAA 72 bp TCCACTGACACGATGCTGTTCTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGTGTCTGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: STDTMLFSRSVQ*RTTHCSVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456970.6
ENST00000622290.4
ENST00000633611.1
CDS-3UTR TCA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCCTTTTCTTGGAGATaGAGAAATTCAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRSFSWR*RNSEGG
Trigger: TCCTCCCTCTGAATTTCTTCATCTCCAAGAAAAGGA...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACCCTGCCCCTTGTCCATaGCCAGAACCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHPAPCP*PEPGHS
Trigger: ACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGG...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCTTCTTTAACTGCATGTaGGTCTGGGATTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: DRARWALPGQTCVLLGPSFFNCM*VWDYPK
Trigger: TTTGGGATAATCCCAGACTCACATGCAGTTAAAGAA...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACGGACAGGGGTTAGACTaGTGGGGGTCTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHGQGLD*WGSSGK
Trigger: CTTCCCTGAAGACCCCCAGCAGTCTAACCCCTGTCC...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCACAAAGGCTTTCTCTaGATTCATAGCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGHKGFL*IHSILG
Trigger: GCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGTG...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTCAGGGAGGACTTCCCTaGCCCCACTGGACCGACAAC +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAQGGLP*PHWTDN
Trigger: GTTGTCGGTCCAGTGGGGGCAGGGAAGTCCTCCCTG...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGGGCCTCCGGAGAGATTCATaGCCTGCTCCCCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTTGEQSMVTGGLRRDS*PAPQLK
Trigger: CTTCAATTGGGGAGCAGGGCATGAATCTCTCCGGAG...GCCCCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCAGATGCTGTCCTTTCCTaGTGGCCATCCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPADAVLS*WPSCPV
Trigger: GACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATC...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCCTGCCGTATTGGATaGTGTCCTTTCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAPCRIG*CPFLLA
Trigger: GGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGG...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTAGGTCTGTCCAGTTaGGAACAACCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRLGLSS*EQPTAV
Trigger: CACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAG...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAQGGLP*PGPAND
Trigger: ATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTG...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCACCGTCTCCAGGGCTaGCCAGATAGCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLHRLQG*PDSLVR
Trigger: TCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCCGGAGAAGGGCACGTaGCAGACACAGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHPEKGT*QTQELF
Trigger: AAACAGCTCCTGTGTCTGGCACGTGCCCTTCTCCGG...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACGCTGTTGACATTGGCTaGAGGGTGGACAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHAVDIG*RVDRAR
Trigger: TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGC...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCATCACCCACCGCACTaGCCTTTCTGGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLHHPPH*PFWSRW
Trigger: CCAGCGGCTCCAGAAAGGCCAGTGCGGTGGGTGATG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACGCCAGCAGACAGCCCTaGGGCACCGTGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHASRQP*GTVRFI
Trigger: AATAAACCTCACGGTGCCCCAGGGCTGTCTGCTGGC...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCTTCCCTGCCCCCACTaGACCGACAACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLLPCPH*TDNSQQ
Trigger: CTGCTGGCTGTTGTCGGTCCAGTGGGGGCAGGGAAG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTGCCTGGGGCAGGATGTaGAGTGCGTGCGTCACGAGA +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAAWGRM*SACVTR
Trigger: TCTCGTGACGCACGCACTCCACATCCTGCCCCAGGC...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGTCTGGGCTTCTGAAGTaGTACGGTCCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGSGLLK*YGPSQG
Trigger: TCCCTGAGAAGGACCGTACCACTTCAGAAGCCCAGA...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPGAPQP*RQTAQW
Trigger: CCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCC...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCATCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPASAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp CTCAGTCCTGGCCGCACATTGGAATCCTATGGGGGAGCTTTAAAATTATACACCGCGGGCTGGTCCAACTaGGGTACGGTTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSPGRTLESYGGALKLYTAGWSN*GTVEGP
Trigger: AGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGC...GGTGTATAATTTTAAAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTACATTGGCTGCAGGGTaGACAGGGCGAGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDATLAAG*TGRDGP
Trigger: GGGCCCATCTCGCCCTGTCCACCCTGCAGCCAATGT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCAACTGGGGTACGGTTaGGGGTCCTGGCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLQLGYG*GSWLRP
Trigger: TGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCAGTGTGGAGCTATCGATaGCCACGGGTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAVWSYR*PRVTSI
Trigger: GATGGAAGTGACCCGTGGTCATCGATAGCTCCACAC...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGATTCTTTAACTGCATGTaGGTCTGGGATTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARFFNCM*VWDYPK
Trigger: TTTGGGATAATCCCAGACTCACATGCAGTTAAAGAA...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCTGTCCACATCTGGCTaGAGGGCACAGGCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHLSTSG*RAQASS
Trigger: ACTAGAAGCCTGTGCCCTGCAGCCAGATGTGGACAG...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTCTGGGGTCCTTGGTaGTGGTCCCAGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPALWGPW*WSQVLF
Trigger: AAACAGAACCTGGGACCAGCACCAAGGACCCCAGAG...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACCTCGGGCCTCCTGCCTaGAGAGGTGCCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHLGPPA*RGASGV
Trigger: GACCCCAGAGGCACCTCTGCAGGCAGGAGGCCCGAG...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGTGGCCTTCACCCTaGCGTATTGGATGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPALWPSP*RIGCCP
Trigger: AGGACAGCATCCAATACGGCAGGGTGAAGGCCACAG...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCTGCTGCCCACCTACTaGAGGGTCGTCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSLLPTY*RVVRPQ
Trigger: CTGTGGGCGGACGACCCTGCAGTAGGTGGGCAGCAG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCATTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPALRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCGCATCTGCAGCTCCGTaGCAGGGTCCACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSASAAP*QGPRQQ
Trigger: CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGC...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACCCGCTCTCTGCCACCTaGCCCTTGTCCATGACCAGA +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHPLSAT*PLSMTR
Trigger: TCTGGTCATGGACAAGGGGCAGGTGGCAGAGAGCGG...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACGCTCCCTCCCAGCCATaGAACTTGATGGTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHAPSQP*NLMVFE
Trigger: CTCGAAGACCATCAAGTTCCATGGCTGGGAGGGAGC...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGTCGGCCACCAGAGTGTaGACAGCAAACACCACCAGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGSATRV*TANTTS
Trigger: ACTGGTGGTGTTTGCTGTCCACACTCTGGTGGCCGA...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACTCCAGGGAGCCTCCTTaGGCGTCCAGGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHSREPP*ASRHSP
Trigger: AGGACTATGCCTGGACGCCCAAGGAGGCTCCCTGGA...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCACTTGTACTGCAGCTaGCCGGGCAGGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSHLYCS*PGRLAT
Trigger: GGTGGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGGGCTGGTTTTTGTGTCCTTaGAGCTCATCTCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTTGEQSMVTGGWFLCP*SSSLVG
Trigger: CCCCACCAGAGATGAGCTCCAAGGACACAAAAACCA...GCCCCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATAGCAGCCACAGCCCGTTaGGGTAGAGGACGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIAATAR*GRGRSR
Trigger: CCGAGAGCGTCCTCTACCTCAACGGGCTGTGGCTGC...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGCCCTGCTCCCCAATTaGAGTGTGGATTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHALLPN*SVDSLR
Trigger: CCTGAGGGAATCCACACTTCAATTGGGGAGCAGGGC...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTGTCCTTCTCAGGGACTaGCTTGATGGACCTCTCGCG +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAVLLRD*LDGPLA
Trigger: CGCGAGAGGTCCATCAAGTCAGTCCCTGAGAAGGAC...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACAGCCTCAGAGATTCTaGTTTAAGGGTCTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAQPQRF*FKGLAG
Trigger: CCCGGCTAGACCCTTAAATCAGAATCTCTGAGGCTG...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp CTCAGTCCTGGCCGCACATTGGAATCCTATGGGGGAGCTTTAAAATTATACACCGGGCAGGAGCGAGAGTaGTGGGTGTGGTCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LSPGRTLESYGGALKLYTGQERE*WVWSEN
Trigger: ATTTTCCGACCACACCCATCACTCTCGCTCCTGCCC...GGTGTATAATTTTAAAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTCCACAGCACCCTCGATaGTCACGAACCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCPQHPR*SRTPPP
Trigger: AGGTGGAGGGGTTCGTGAGCATCGAGGGTGCTGTGG...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGCCAGGCTCAGCCGCTaGTTCTGGCCTCCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVARLSR*FWPPER
Trigger: TCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACCCCTGCCGTATTGGATaGTGTCCTTTCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHPCRIG*CPFLLA
Trigger: GGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGG...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGGCCTGGGTTCGGAATaGCCGGACCACTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVGLGSE*PDHCAA
Trigger: GGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTTTGAAGGACACGCCCTaGACAGCCAGCGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCLKDTP*TASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAA...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTTCGTCCGAGTGCTCCTaGAGCAGGTCGAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLSSECS*SRSRFI
Trigger: GATGAACCTCGACCTGCTGCAGGAGCACTCGGACGA...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCGGGCGAGATGGGCCCTaGCCGGGCAGACCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTGRDGP*PGRPVY
Trigger: ATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCC...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCGGGAGCCTGGGCATGTaGTTGAGGCCCCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTGSLGM*LRPPGE
Trigger: CTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTTTATCCTAGAGTTTTaGAAGATGTTACCATTGGGT +
Preference number: 4 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWFILEF*KMLPLG
Trigger: ACCCAATGGTAACATCTTGCAAAACTCTAGGATAAA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TATCCTTTCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCCGGACAGGGTCGCTCTaGAAGCCCGCTCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: YPFSKSFFNPCYEIKEQLRTGSL*KPAPEA
Trigger: GGCCTCCGGAGCGGGCTTCCAGAGCGACCCTGTCCG...GAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAAAGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCCGCACTGGCCTTTCTaGAGCCGCTGGACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSPHWPF*SRWTEP
Trigger: TGGCTCTGTCCAGCGGCTCCAGAAAGGCCAGTGCGG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCATCACCCACCGCACTaGCCTTTCTGGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSHHPPH*PFWSRW
Trigger: CCAGCGGCTCCAGAAAGGCCAGTGCGGTGGGTGATG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCTTCCCTGCCCCCACTaGACCGACAACAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSLPCPH*TDNSQQ
Trigger: CTGCTGGCTGTTGTCGGTCCAGTGGGGGCAGGGAAG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTGAAGCTGTCCACATCTaGCTGCAGGGCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAEAVHI*LQGTGF
Trigger: GAAGCCTGTGCCCTGCAGCCAGATGTGGACAGCTTC...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGAGAGGAACCTCTGTCTaGGCTTCTGAAGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGRGTSV*ASEVVR
Trigger: CCGTACCACTTCAGAAGCCCAGACAGAGGTTCCTCT...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACTCCCACAGGAGCCTCTaGAAGAGCAACCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHSHRSL*KSNLDA
Trigger: GGCATCCAGGTTGCTCTTCCAGAGGCTCCTGTGGGA...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTACCACTGTGCTGCCCTaGAACGTCTCAGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLTTVLP*NVSAMW
Trigger: CCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGT...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTTCAGCACAGCACACGTaGCAGCTGCAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLSAQHT*QLQTPG
Trigger: GCCTGGTGTTTGCAGCTGCCACGTGTGCTGTGCTGA...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTAGGCCAGCACTGAGGTaGGCTTTGCTCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDARPALR*ALLSTA
Trigger: TGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACAGTGTCTGGGTCACCTaGAGGGCAGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHSVWVT*RAAETE
Trigger: CTCTGTCTCTGCTGCCCTCCAGGTGACCCAGACACT...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp CTCAGTCCTGGCCGCACATTGGAATCCTATGGGGGAGCTTTAAAATTATACACCCTCTGTCTGGGCTTCTaGAGTGGTACGGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSPGRTLESYGGALKLYTLCLGF*SGTVLL
Trigger: GAGAAGGACCGTACCACTTCAGAAGCCCAGACAGAG...GGTGTATAATTTTAAAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTAAGCGGTTTAGCAGGTaGCCAATGGGTGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLKRFSR*PMGVRS
Trigger: TGAGCGGACACCCATTGGTCACCTGCTAAACCGCTT...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTAGACGAGTAGCTGGCTaGCTCCAAGCGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCRRVAG*LQASQL
Trigger: CAGCTGAGACGCTTGGAGTCAGCCAGCTACTCGTCT...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCCCTGCCCCTTGTCCATaGCCAGAACCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTPAPCP*PEPGHS
Trigger: ACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGG...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACCAGGGAGGACTTCCCTaGCCCCACTGGACCGACAAC +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHQGGLP*PHWTDN
Trigger: GTTGTCGGTCCAGTGGGGGCAGGGAAGTCCTCCCTG...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACCTGTCCACATCTGGCTaGAGGGCACAGGCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHLSTSG*RAQASS
Trigger: ACTAGAAGCCTGTGCCCTGCAGCCAGATGTGGACAG...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCTCCTGCCTGCAGAGGTaGCTCTGGGGTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTSCLQR*LWGPWC
Trigger: GCACCAAGGACCCCAGAGGCACCTCTGCAGGCAGGA...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCTGTGGCCTTCACCCTaGCGTATTGGATGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLLWPSP*RIGCCP
Trigger: AGGACAGCATCCAATACGGCAGGGTGAAGGCCACAG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATACAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIQWGSH*HHQADL
Trigger: GAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTG...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTTTGCGAACAACCCACTaGAGTGTCTGGGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLLRTTH*SVWVTW
Trigger: CCAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAA...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR GCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCGGTCCTGCCAACGATaGCCACCTTCTCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSRSCQR*PPSLLR
Trigger: ACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVSLPRS*QRCPPS
Trigger: AGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGA...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATACTGGAGCGCAGTGTGTaGAGCCCCACGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSILERSV*SPTWAM
Trigger: CATTGCCCACGTGGGGCTGCACACACTGCGCTCCAG...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCATTCTCCTCTATCTCCTaGCTGTCTGGCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAFSSIS*LSGLIQ
Trigger: CTGGATCAAGCCAGACAGCCAGGAGATAGAGGAGAA...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTCTGCAGAGGTGCCTCTaGGGTCCTTGGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVLQRCL*GPWCWS
Trigger: GGACCAGCACCAAGGACCCCAGAGGCACCTCTGCAG...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCATCTGGGCTTCTGAAGTaGTACGGTCCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPSGLLK*YGPSQG
Trigger: TCCCTGAGAAGGACCGTACCACTTCAGAAGCCCAGA...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTAGGCAAACAGCCCAATaGCTTGGAGACAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDARQTAQ*LGDSRG
Trigger: TCCTCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCGGAGCACCGCAGCCATaGAGGCAAACAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSGAPQP*RQTAQW
Trigger: CCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCC...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTCTGGAAGAGCAACCTaGATGCCCGGGCCCCACCTA +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSSGRAT*MPGPHL
Trigger: TAGGTGGGGCCCGGGCATCCAGGTTGCTCTTCCAGA...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATAACCAGCTCCCGAGCATaGCCTGCATCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSITSSRA*PASAAP
Trigger: CGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCAAAAGTACACACAGCATaGCAGTTCCCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAKVHTA*QFPASE
Trigger: CTCTGAGGCTGGGAACTGCCATGCTGTGTGTACTTT...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR TCA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGTCCTTTTCTTGGAGATaGAGAAATTCAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRSFSWR*RNSEGG
Trigger: TCCTCCCTCTGAATTTCTTCATCTCCAAGAAAAGGA...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGCGTCTCAGCTGGCATaGGCTAACCACATACAGGCT +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCASQLA*ANHIQA
Trigger: AGCCTGTATGTGGTTAGCTCATGCCAGCTGAGACGC...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACCAACTGGGGTACGGTTaGGGGTCCTGGCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHQLGYG*GSWLRP
Trigger: TGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTG...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTCAGCAGGTACACAGCTaGCTTTCTGTATACAGCCCG +
Preference number: 4 (lower is better)
Translates to: TGNRARLLCQCQHPGCDAQQVHS*LSVYSP
Trigger: CGGGCTGTATACAGAAAGGCAGCTGTGTACCTGCTG...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCTTCCATCTCCAGCACTaGAGGCTGTGCGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTFHLQH*RLCGLV
Trigger: GACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAA...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CTCAGTCCTGGCCGCACATTGGAATCCTATGGGGGAGCTTTAAAATTATACACCAAGGGCAGGAAAGCCTaGGCCTTGTTGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LSPGRTLESYGGALKLYTKGRKA*ALLRML
Trigger: CAACATCCTCAACAAGGCCCAGGCTTTCCTGCCCTT...GGTGTATAATTTTAAAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTAACCCATCTCTGCGATaGCCCCATTTGCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLNPSLR*PHLPAL
Trigger: TAGTGCTGGCAAATGGGGCCATCGCAGAGATGGGTT...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGCTGTCCTTTCCTGCTaGCCATCCTGCCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVAVLSC*PSCPVR
Trigger: CCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTAGACAGACGAGTAGCTaGCTGACTCCAAGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLRQTSS*LTPSVS
Trigger: TGAGACGCTTGGAGTCAGCCAGCTACTCGTCTGTCT...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGGGAAACTGATCCTCTaGCTTTCATCTACGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPGKLIL*LSSTRA
Trigger: TGCTCGCGTAGATGAAAGCCAGAGGATCAGTTTCCC...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACCCAGGAGCTCCACATTaGCCGCAAGCCACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHPGAPH*PQATCQ
Trigger: CTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGG...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCCCAGGAGCTCCACATTaGCCGCAAGCCACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTPGAPH*PQATCQ
Trigger: CTGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGG...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCACCCACTGCAGTGTCTaGGTCACCTGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTTHCSV*VTWRAA
Trigger: TGCTGCCCTCCAGGTGACCCAGACACTGCAGTGGGT...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTAACAGGATGGGGTCCTaGGGGATGATGCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCNRMGS*GMMLIL
Trigger: CAGGATCAGCATCATCCCCCAGGACCCCATCCTGTT...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTCACAGGAGCTGTTTCTaGCCCACGCTCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVHRSCF*PTLRSS
Trigger: CGAGGACCTGAGCGTGGGCCAGAAACAGCTCCTGTG...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTCCAGGCAGAGGAAGGTaGCCAGACGGTCAAAGGACA +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVPGRGR*PDGQRT
Trigger: TGTCCTTTGACCGTCTGGTCACCTTCCTCTGCCTGG...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTCCAGTCGCGGGAAACTaGTCCTCTGGCTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCPVAGN*SSGFHL
Trigger: TAGATGAAAGCCAGAGGATCAGTTTCCCGCGACTGG...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACATGGCCACCAAGGCTTTaGGCTGCACCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTWPPRL*AAPSPG
Trigger: CCCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCA...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCGTGTGGAGCTATCGATaGCCACGGGTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSVWSYR*PRVTSI
Trigger: GATGGAAGTGACCCGTGGTCATCGATAGCTCCACAC...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGGTGGGTCCAGCTCCTaGCCGAAGCACACATTCTCT +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHGGSSS*PKHTFS
Trigger: AGAGAATGTGTGCTTCGGGCAGGAGCTGGACCCACC...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTTGCGATGGCCCCATTTaGCAGCACTATGATCCAATC +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLCDGPI*QHYDPI
Trigger: GATTGGATCATAGTGCTGGCAAATGGGGCCATCGCA...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCAGAAGGAGGCCACTTaGTGGCAGAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSQKEAT*WQRKRK
Trigger: CTTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACACTGGAGCGCAGTGTGTaGAGCCCCACGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTLERSV*SPTWAM
Trigger: CATTGCCCACGTGGGGCTGCACACACTGCGCTCCAG...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTCCTTTCTGGAGCCGCTaGACAGAGCCAGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVPFWSR*TEPGPF
Trigger: GAAAGGTCCTGGCTCTGTCCAGCGGCTCCAGAAAGG...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTAAGGCGCCCAGCTCCTaGCCTCGGATGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVKAPSS*PRMPRT
Trigger: AGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTT...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGCCAGCAGACAGCCCTaGGGCACCGTGAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVASRQP*GTVRFI
Trigger: AATAAACCTCACGGTGCCCCAGGGCTGTCTGCTGGC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTCTCAGCCGCTGCTTCTaGCCTCCGGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVLSRCF*PPERFM
Trigger: CATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAG...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCATGATCCAATCAGCCTaGGGCAGGATGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSMIQSA*GRMWSA
Trigger: CGCACTCCACATCCTGCCCCAGGCTGATTGGATCAT...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACTTCTCCTCTATCTCCTaGCTGTCTGGCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHFSSIS*LSGLIQ
Trigger: CTGGATCAAGCCAGACAGCCAGGAGATAGAGGAGAA...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTAGTGTCTGGGTCACCTaGAGGGCAGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVSVWVT*RAAETE
Trigger: CTCTGTCTCTGCTGCCCTCCAGGTGACCCAGACACT...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTGCCCCACGTGGGCAATaGGGACCCCGTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVAPRGQ*GPRRSR
Trigger: TCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGC...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAATCCTCACCCTGGTGTaGATTCATGAGCCTACATGT +
Preference number: 4 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPILTLV*IHEPTC
Trigger: ACATGTAGGCTCATGAATCCACACCAGGGTGAGGAT...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCTCATTTGCTCCTCCTaGTGGTGGTTCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLLICSS*WWFLFL
Trigger: CAAGAAAAGGAACCACCATCAGGAGGAGCAAATGAG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTGAACCCCTCCACCTTTaGCAGCTCCCCAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVEPLHL*QLPKEG
Trigger: GCCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTC...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACACAACTGGGGTACGGTTaGGGGTCCTGGCTCAGACCA +
Preference number: 4 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTQLGYG*GSWLRP
Trigger: TGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTG...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTCTTGAGGCCCCCAGGTaGGTCCAGAGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTLEAPR*VQSTAG
Trigger: CCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAG...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGTAGGAACCCATCTCTaGGATGGCCCCATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHVGTHL*DGPICQ
Trigger: CTGGCAAATGGGGCCATCGCAGAGATGGGTTCCTAC...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTATTGGCCACTTTCTCTaGCATTTTCCTCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLIGHFL*HFPPRE
Trigger: CTCTCTGGGAGGAAAATGGCAGAGAAAGTGGCCAAT...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACTCGGCCACCAGAGTGTaGACAGCAAACACCACCAGT +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHSATRV*TANTTS
Trigger: ACTGGTGGTGTTTGCTGTCCACACTCTGGTGGCCGA...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTTCCAAGCGTCTCAGCTaGCATGAGCTAACCACATAC +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCSKRLS*HELTTY
Trigger: GTATGTGGTTAGCTCATGCCAGCTGAGACGCTTGGA...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTAAAGTACACACAGCATaGCAGTTCCCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCKVHTA*QFPASE
Trigger: CTCTGAGGCTGGGAACTGCCATGCTGTGTGTACTTT...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATAGTCCTGGCCGCACATTaGAATCCTATGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIVLAAH*NPMGEL
Trigger: AAGCTCCCCCATAGGATTCCAATGTGCGGCCAGGAC...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTGGTGAGCCGTGCCCGTaGGTCCTTCTGCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVGEPCP*VLLPHL
Trigger: CAAATGAGGCAGAAGGACTCACGGGCACGGCTCACC...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTCCACGAGGCCAGCACTaGGGTGGGCTTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTPRGQH*GGLCSA
Trigger: TGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGG...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACAGGAGGGTGGATCACATaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTGGWIT*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCATGTGATCCACCCTCC...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp TTCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCTCTGTTGGACAGGGGTTAGACTaGTGGGGGTCTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FSKSFFNPCYEIKEQLSVGQGLD*WGSSGK
Trigger: CTTCCCTGAAGACCCCCAGCAGTCTAACCCCTGTCC...AACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR GCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCCTGCTGGCCATCCTaGCCTGTCAGGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVSCWPS*PVRVIQ
Trigger: CTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGA...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACAAGCACACGTGGCAGCTaGAAACACCAGGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTSTRGS*KHQAIP
Trigger: GGGAATGGCCTGGTGTTTGCAGCTGCCACGTGTGCT...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTCTCCCGAGCATGGCCTaGATCTGCAGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTLPSMA*ICSSVP
Trigger: TGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAG...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTCCGCTCTCTGCCACCTaGCCCTTGTCCATGACCAGA +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVPLSAT*PLSMTR
Trigger: TCTGGTCATGGACAAGGGGCAGGTGGCAGAGAGCGG...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGTGAGGTTTATTCTGTaGAGGCAGGGAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHVRFIL*RQGGLS
Trigger: GGAAAGCCCTCCCTGCCTCCACAGAATAAACCTCAC...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACAACCCATCTCTGCGATaGCCCCATTTGCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHNPSLR*PHLPAL
Trigger: TAGTGCTGGCAAATGGGGCCATCGCAGAGATGGGTT...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
3UTR CAA 72 bp CACAGGAGTACAGGTAAAACGGGAAATCGAGCAAGATaGTTGTGTCAATGTCAACACCCTGGCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: HRSTGKTGNRAR*LCQCQHPGCDA
Trigger: AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACCTGTACTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGTGAATCAGGAACACTaGGAAGCTCATCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVVNQEH*EAHRGE
Trigger: CTCACCACGATGAGCTTCGCAGTGTTCCTGATTCAC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTCACCCTGCCGTATTaGATGCTGTCCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIFTLPY*MLSFPA
Trigger: AGCAGGAAAGGACAGCATCCAATACGGCAGGGTGAA...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTAGTGTCTGGGTCACCTaGAGGGCAGCAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVSVWVT*RAAETE
Trigger: CTCTGTCTCTGCTGCCCTCCAGGTGACCCAGACACT...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACTACCATTGGGTGAAATaGGGTACCAAGTACACGAAT +
Preference number: 4 (lower is better)
Translates to: QRANTGLDSISCGAIDDHYHWVK*GTKYTN
Trigger: ATTCGTGTACTTGGTACCCCATTTCACCCAATGGTA...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCTCTGTTGGGAGCAACTCTCTGTTaGGCCAGTAAGTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SPSHFSIPAMKSRSNSLLGATLC*ASKSLG
Trigger: CCCTAGAGACTTACTGGCCCAACAGAGAGTTGCTCC...CAACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR CCA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTATGCTCTGTGATAATTaGCCACTTTCTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLMLCDN*PLSLPF
Trigger: AAATGGCAGAGAAAGTGGCCAATTATCACAGAGCAT...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CCA 90 bp TATCCTTTCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCGGAGCAACTCTCTGTTaGGCCAGTAAGTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: YPFSKSFFNPCYEIKEQLGATLC*ASKSLG
Trigger: CCCTAGAGACTTACTGGCCCAACAGAGAGTTGCTCC...GAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAAAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR CCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATAACACACACACACAACTaGAGAACAGAGCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSITHTHN*RTEHGH
Trigger: GTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGT...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
3UTR CAA 72 bp AGGAGTACAGGTAAAACGGGAAATCGAGCAAGATTGTaGTGTCAATGTCAACACCCTGGCTGTGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: RSTGKTGNRARL*CQCQHPGCDAL
Trigger: TAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACCTGTACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR TCA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACCCTGGTGTGGATTCATaGGCCTACATGTGTGATAAA +
Preference number: 4 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHPGVDS*AYMCDK
Trigger: TTTATCACACATGTAGGCTCATGAATCCACACCAGG...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp TATCCTTTCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCGTGAATCAGGAACACTaGGAAGCTCATCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: YPFSKSFFNPCYEIKEQLVNQEH*EAHRGE
Trigger: CTCACCACGATGAGCTTCGCAGTGTTCCTGATTCAC...GAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAAAGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR GCA 90 bp TTCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCTCTGTTGTGAATCAGGAACACTaGGAAGCTCATCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSKSFFNPCYEIKEQLSVVNQEH*EAHRGE
Trigger: CTCACCACGATGAGCTTCGCAGTGTTCCTGATTCAC...AACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR GCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTAGGATGTGGAGTGCGTaGGTCACGAGAATCCGTGTT +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVRMWSA*VTRIRV
Trigger: AACACGGATTCTCGTGACGCACGCACTCCACATCCT...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTTGGTTGAAGACATGCTaGCCAACGTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTWLKTC*PTWASR
Trigger: CCTGGATGCCCACGTTGGCCAGCATGTCTTCAACCA...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTTCCAGGATGAGGATCTaGGTCTTCCGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTSRMRI*VFRRRA
Trigger: TGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGA...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR TCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTATGTGGAGGTTGCAGTaGGCTGAGATTGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTMWRLQ*AEIEPL
Trigger: CAGTGGCTCAATCTCAGCTCACTGCAACCTCCACAT...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR GCA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACACACAAAGGCTTTCTCTaGATTCATAGCATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTHKGFL*IHSILG
Trigger: GCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGTG...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTATCTCCTGGCTGTCTaGCTTGATCCAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVYLLAV*LDPEDT
Trigger: TGTGTCTTCTGGATCAAGCCAGACAGCCAGGAGATA...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTATGCTCTGTGATAATTaGCCACTTTCTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVMLCDN*PLSLPF
Trigger: AAATGGCAGAGAAAGTGGCCAATTATCACAGAGCAT...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTAGCAAACACCACCAGTaGGACCAGAAATGTAGACAC +
Preference number: 4 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTSKHHQ*DQKCRH
Trigger: GTGTCTACATTTCTGGTCGCACTGGTGGTGTTTGCT...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR GCA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTTTATCCTAGAGTTTTaGAAGATGTTACCATTGGGT +
Preference number: 4 (lower is better)
Translates to: NRARLLCQCQHPGCDALSFILEF*KMLPLG
Trigger: ACCCAATGGTAACATCTTGCAAAACTCTAGGATAAA...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp TTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTACCATTGGGTGAAATaGGGTACCAAGTACACGAAT +
Preference number: 4 (lower is better)
Translates to: LPLGEMGYQVHESLYIIVYHWVK*GTKYTN
Trigger: ATTCGTGTACTTGGTACCCCATTTCACCCAATGGTA...AACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CCA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATACACATTGGAATCCTATaGGGGAGCTTTAAAATTATA +
Preference number: 4 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIHIGIL*GSFKII
Trigger: TATAATTTTAAAGCTCCCCCATAGGATTCCAATGTG...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CCA 90 bp GTATCCAAGAGTCTACATGGTATGTTTTGGAAAATGCCAGGTTATGGTAGCTATCTACATGGTATGTTTTaGAAAATGCCAGGTTATGGT +
Preference number: 4 (lower is better)
Translates to: VSKSLHGMFWKMPGYGSYLHGMF*KMPGYG
Trigger: ACCATAACCTGGCATTTTCCAAAACATACCATGTAG...ATAGCTACCATAACCTGGCATTTTCCAAAACATACCATGTAGACTCTTGGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000575728.1
ENST00000600761.3
CDS-3UTR GCA 90 bp GTATCCAAGAGTCTACATGGTATGTTTTGGAAAATGCCAGGTTATGGTAGCTATGTATGTTTTGGAAAATaGCAGGTTATGGTAGCTATA +
Preference number: 4 (lower is better)
Translates to: VSKSLHGMFWKMPGYGSYVCFGK*QVMVAI
Trigger: TATAGCTACCATAACCTGGCATTTTCCAAAACATAC...ATAGCTACCATAACCTGGCATTTTCCAAAACATACCATGTAGACTCTTGGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000575728.1
ENST00000600761.3
CDS-3UTR CCA 90 bp CCTAATGTGGCTCTAAAATTACCTTGTGTATCCAAGAGTCTACATGGTATGTTTCTACATGGTATGTTTTaGAAAATGCCAGGTTATGGT +
Preference number: 4 (lower is better)
Translates to: PNVALKLPCVSKSLHGMFLHGMF*KMPGYG
Trigger: ACCATAACCTGGCATTTTCCAAAACATACCATGTAG...AAACATACCATGTAGACTCTTGGATACACAAGGTAATTTTAGAGCCACATTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575728.1
ENST00000600761.3
CDS-3UTR CAA 90 bp AGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGCAGCCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SSRAWPASAAPCQGPRQQPRSAH*YCSWPG
Trigger: GCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGG...CTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS GCA 90 bp GCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTaGCCGGGGTTGGGAGGAAAGGCCTGCTCTGACCAGAGGGTTTGT +
Preference number: 5 (lower is better)
Translates to: AREDFPAPVLPTMPT*PGLGGKACSDQRVC
Trigger: ACAAACCCTCTGGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS-3UTR CAA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGCCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLPRSAH*YCSWPG
Trigger: GCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGG...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTCTGCCACCTGCCCCTaGTCCATGACCAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGSATCP*SMTRTR
Trigger: CCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CAAACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCGAACCCCTCCACCTTaGACAGCTCCCCAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QTSSRAWPASAAPCQGPRRTPPP*TAPQGG
Trigger: CCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTCG...CCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGTCTGCCACCTGCCCCTaGTCCATGACCAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: DARAPPRSTAAMEANSPMSATCP*SMTRTR
Trigger: CCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGCAGAAGGAGGCCACTaGCTGGCAGAGGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRAEGGH*LAEEEE
Trigger: TTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTGC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp AGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGAAACAGCCCAATGGCTaGGAGACAGCCGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: REDFPAPVLPTMPTFSPAKQPNG*ETAEEP
Trigger: GGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTT...CGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCAAACAGCCCAATGGCTaGGAGACAGCCGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GEMGPARADLCIARSFRLKQPNG*ETAEEP
Trigger: GGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTT...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGAAACAGCCCAATGGCTaGGAGACAGCCGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLKQPNG*ETAEEP
Trigger: GGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTT...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGTCA +
Preference number: 5 (lower is better)
Translates to: DRARWALPGQTCVLLGPSPRSST*AASHLS
Trigger: TGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGG...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACCAGCTCCCGAGCATGGCCTGCATCTGCAGCTCCGTGCCAGGGTCCACGGCAGTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: TSSRAWPASAAPCQGPRQSPAWI*KDTPCT
Trigger: TGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGA...CTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCCTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AAQIASSECSCSRSRFIRLATKA*SCTVSR
Trigger: CCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAG...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCCTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: MTRTRAQSITERRRWAMSLATKA*SCTVSR
Trigger: CCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAG...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGLATKA*SCTVSR
Trigger: CCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAG...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGPRSAH*YCSWPG
Trigger: GCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGG...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGTCTGCCACCTGCCCCTaGTCCATGACCAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: SCVDLEGHALHSQRELRSSATCP*SMTRTR
Trigger: CCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGCCAACTGGGGTACGGTaGAGGGTCCTGGCTCAGACC +
Preference number: 5 (lower is better)
Translates to: HGSLPSPALQAVRAGPTGPTGVR*RVLAQT
Trigger: GGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGG...CCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS CCA 90 bp GACTTCCCTGCCCCCACTGGACCGACAACAGCCAGCAGACAGCCCTaGGGCACCGTGAGGTTTATTCTGTGGAGGCAGGGAGGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: DFPAPTGPTTASRQP*GTVRFILWRQGGLS
Trigger: GGAAAGCCCTCCCTGCCTCCACAGAATAAACCTCACGGTGCCCCAGGGCTGTCTGCTGGCTGTTGTCGGTCCAGTGGGGGCAGGGAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS-3UTR CAA 90 bp GAGAAGCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGCGAACCCCTCCACCTTaGACAGCTCCCCAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: EKPTRPALRWALLSTAHVRTPPP*TAPQGG
Trigger: CCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTCG...CACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTGCCCTGCTCCCCAATaGAAGTGTGGATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGCPAPQ*KCGFPQ
Trigger: CTGAGGGAATCCACACTTCAATTGGGGAGCAGGGCA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGGCCCAATGACCTGGTaGAAGACATGCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLGPMTW*KTCWPT
Trigger: CGTTGGCCAGCATGTCTTCAACCAGGTCATTGGGCC...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGGCCCAATGACCTGGTaGAAGACATGCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: PLSMTRTRAQSITERRRWGPMTW*KTCWPT
Trigger: CGTTGGCCAGCATGTCTTCAACCAGGTCATTGGGCC...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGGCAGAAGGAGGCCACTaGCTGGCAGAGGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLAEGGH*LAEEEE
Trigger: TTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTGC...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: GEMGPARADLCIARSFRLSPAWI*KDTPCT
Trigger: TGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGA...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp GAGCTGCACCGTCTCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: ELHRLQGCPDSLVRVLLQSPAWI*KDTPCT
Trigger: TGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGA...CTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGAGACGGTGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp TCCAGGGCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: SRAAQIASSECSCSRSRFPRSST*AASHLK
Trigger: TTTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGG...GAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGPRSST*AASHLK
Trigger: TTTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGG...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS CCA 90 bp ACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTGCCCGGGGTTaGGAGGAAAGGCCTGCTCTGACCAGAGGGTTTGTGGGCATTTAT +
Preference number: 5 (lower is better)
Translates to: TSLPRSCQRCPPARG*EERPALTRGFVGIY
Trigger: ATAAATGCCCACAAACCCTCTGGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS-3UTR CAA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCGTCCTTCTGCCTCATTaGCTCCTCCTGATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGVLLPH*LLLMVV
Trigger: AACCACCATCAGGAGGAGCAAATGAGGCAGAAGGAC...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGTCCTTCTGCCTCATTaGCTCCTCCTGATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: AGSLGMCLRPPGESRVQRVLLPH*LLLMVV
Trigger: AACCACCATCAGGAGGAGCAAATGAGGCAGAAGGAC...CCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GCAGCAGCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCAGAAATGTAGACACTaGGAAGGACACCAGCGACAC +
Preference number: 5 (lower is better)
Translates to: AAAHWPGRTSLPRSCQRCQKCRH*EGHQRH
Trigger: GTGTCGCTGGTGTCCTTCCAAGTGTCTACATTTCTG...GCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCGAACCCCTCCACCTTaGACAGCTCCCCAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGRTPPP*TAPQGG
Trigger: CCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTCG...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GGAGGACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTTCTCTCCTGCGTGTGCCCTGCTCCCCAATaGAAGTGTGGATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GGLPCPGPANDAHLLSCVCPAPQ*KCGFPQ
Trigger: CTGAGGGAATCCACACTTCAATTGGGGAGCAGGGCA...CACGCAGGAGAGAAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTACAGCGGGGCTTCTCAGGGACTGACTaGATGGACCTCTCGCGTCTA +
Preference number: 5 (lower is better)
Translates to: GSLGMCLRPPGESRVQRGFSGTD*MDLSRL
Trigger: TAGACGCGAGAGGTCCATCAAGTCAGTCCCTGAGAA...GCCCCGCTGTACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCGCAGAAGGAGGCCACTaGCTGGCAGAGGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: AAQIASSECSCSRSRFIRAEGGH*LAEEEE
Trigger: TTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTGC...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGAAACAGCCCAATGGCTaGGAGACAGCCGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRKQPNG*ETAEEP
Trigger: GGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTGTTT...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: DARAPPRSTAAMEANSPMTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLSMTRTRAQSITERRRWTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGTCA +
Preference number: 5 (lower is better)
Translates to: ELSMTTGHFHLQHCRLCGPRSST*AASHLS
Trigger: TGACAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGG...CCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSPAWI*KDTPCT
Trigger: TGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGGCAGACCTGTGTATaGCTAGGTCCTTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWGQTCV*LGPSGS
Trigger: AGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCC...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp TCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGGAGTCGCTGTTGACATaGGCTGCAGGGTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: SLPSPALQAVRAGPTGVRESLLT*AAGWTG
Trigger: CCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTC...CCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGGGTACGGTCCCAGGAGCTCCACATaGGCCGCAAGCCACCTGAAA +
Preference number: 5 (lower is better)
Translates to: HFHLQHCRLCGLVQLGYGPRSST*AASHLK
Trigger: TTTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGG...ACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638420.1
CDS-3UTR CAA 90 bp GCCCACGAGGCCAGCACTGAGGTGGGCTTTGCTCAGCACAGCACACGTGGCAGCGTCCCAGGTTCTGTTTaGTTCCCTGGAGTAGCCCAC +
Preference number: 5 (lower is better)
Translates to: AHEASTEVGFAQHSTRGSVPGSV*FPGVAH
Trigger: GTGGGCTACTCCAGGGAACAAAACAGAACCTGGGAC...GCTGCCACGTGTGCTGTGCTGAGCAAAGCCCACCTCAGTGCTGGCCTCGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633611.1
CDS TCA 90 bp TGCTCCAGTGTGCCCATCATCCGGTCTTCTCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATC +
Preference number: 5 (lower is better)
Translates to: CSSVPIIRSSLLRGS*RTRPAQPAGAQVGI
Trigger: GATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGACCGGATGATGGGCACACTGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS GCA 90 bp GGAGAAACAGTGGCAGGATGGCCACAGTGGCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTCCAGGAGTCCAAAGGCGTACATCAG +
Preference number: 5 (lower is better)
Translates to: GETVAGWPQWQWGSH*HHQADLQESKGVHQ
Trigger: CTGATGTACGCCTTTGGACTCCTGGAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTGCCACTGTGGCCATCCTGCCACTGTTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638420.1
CDS CCA 90 bp GAGTCCTTGCTCCAGTGTGCCCATCATCCGGTCTTCTCTCCTGCGTaGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: ESLLQCAHHPVFSPA*ILKDTPCTASGSSG
Trigger: ACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGACCGGATGATGGGCACACTGGAGCAAGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS-3UTR CAA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCAATGCTATTGCCTTGTaGTGCCTCCGGGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: MTRTRAQSITERRRWAMSNAIAL*CLRAAL
Trigger: CAGTGCAGCCCGGAGGCACAACAAGGCAATAGCATT...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGAATGCTATTGCCTTGTaGTGCCTCCGGGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWNAIAL*CLRAAL
Trigger: CAGTGCAGCCCGGAGGCACAACAAGGCAATAGCATT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GATGCCCGGGCCCCACCTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGTCCCAGCCATGGAACTaGATGGTCTTCGAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: DARAPPRSTAAMEANSPMSQPWN*MVFEFL
Trigger: CAGGAACTCGAAGACCATCAAGTTCCATGGCTGGGA...CATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAGGTGGGGCCCGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCTCCCAGCCATGGAACTaGATGGTCTTCGAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GEMGPARADLCIARSFRLSQPWN*MVFEFL
Trigger: CAGGAACTCGAAGACCATCAAGTTCCATGGCTGGGA...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CAGCCCAATGGCTTGGAGACAGCCGAGGAGCCCGAAGATCCCGCCACGCAGGGCAGGAAAGCCTGGGCCTaGTTGAGGATGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: QPNGLETAEEPEDPATQGRKAWA*LRMLRT
Trigger: AGTTCTCAACATCCTCAACAAGGCCCAGGCTTTCCT...GCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGCCATTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCTGCCCTGCTCCCCAATaGAAGTGTGGATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: AAQIASSECSCSRSRFIRCPAPQ*KCGFPQ
Trigger: CTGAGGGAATCCACACTTCAATTGGGGAGCAGGGCA...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGTCTAGCCGGGAGCCTGGGCATGTGCTTGAGGCCCCCAGGTGAGTCCAGAGTAACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLAGSLGMCLRPPGESRVTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...TACTCTGGACTCACCTGGGGGCCTCAAGCACATGCCCAGGCTCCCGGCTAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp ATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGGCAATGAGCAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: MTRTRAQSITERRRWAMSSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...GCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CACGCTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: HAQVLASVSTLVLQLAGQSRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGCCAACTGGGGTACGGTaGAGGGTCCTGGCTCAGACC +
Preference number: 5 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLPTGVR*RVLAQT
Trigger: GGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGG...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp TCCTGCGTGGATCTTGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTCCTTCTGCCTCATTaGCTCCTCCTGATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SCVDLEGHALHSQRELRSVLLPH*LLLMVV
Trigger: AACCACCATCAGGAGGAGCAAATGAGGCAGAAGGAC...CGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGGCTCCAGAAATGTAGACACTaGGAAGGACACCAGCGACAC +
Preference number: 5 (lower is better)
Translates to: GEMGPARADLCIARSFRLQKCRH*EGHQRH
Trigger: GTGTCGCTGGTGTCCTTCCAAGTGTCTACATTTCTG...GAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CTCAGGTCCTCGCCTCGGTCAGCACACTTGTACTGCAGCTGGCCGGGCAGGCTGAAAGCCTGGGCCTTGTaGAGGATGTTGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: LRSSPRSAHLYCSWPGRLKAWAL*RMLRTV
Trigger: CACAGTTCTCAACATCCTCAACAAGGCCCAGGCTTT...CAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CCCTTGTCCATGACCAGAACCCGGGCACAGTCCATCACGGAGCGCAGGCGGTGGAGGAAAGCCTGGGCCTaGTTGAGGATGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: PLSMTRTRAQSITERRRWRKAWA*LRMLRT
Trigger: AGTTCTCAACATCCTCAACAAGGCCCAGGCTTTCCT...CCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGTCACGAGAATCCGTGTaGTTCCCTGGAGTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWSRESV*FPGVVH
Trigger: GTGGACTACTCCAGGGAACAACACGGATTCTCGTGA...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000205557.12
CDS-3UTR CAA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGTTCTCAGGGACTGACTaGATGGACCTCTCGCGTCTA +
Preference number: 5 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGFSGTD*MDLSRL
Trigger: TAGACGCGAGAGGTCCATCAAGTCAGTCCCTGAGAA...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: DRARWALPGQTCVLLGPSSRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp GGCCTGACTCCTGGGCCAGTCTGTAAAACAGGCCCTTCTGGGCCAGCAGCTGGGGTCCCAGGTTCTGTTTaGTTCCCTGGAGTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: GLTPGPVCKTGPSGPAAGVPGSV*FPGVVH
Trigger: GTGGACTACTCCAGGGAACAAAACAGAACCTGGGAC...CCCAGCTGCTGGCCCAGAAGGGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456970.6
CDS-3UTR CAA 90 bp ACAGCGGGGCTGAGAGTCGCTGTTGACATTGGCTGCAGGGTGGACAGGGCGAGAGGGGGCACCTGGTTTTaGTGTCCTTGGAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: TAGLRVAVDIGCRVDRARGGTWF*CPWSSS
Trigger: AGATGAGCTCCAAGGACACAAAAACCAGGTGCCCCC...TCTCGCCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTCTCAGCCCCGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS TCA 90 bp CCTGGTAGGAACCCATCTCTGCGATGGCCCCATTTGCCAGCACTATaGTCCAATCAGCCTGGGGCAGGATGTGGAGTGCGTGCGTCACGA +
Preference number: 5 (lower is better)
Translates to: PGRNPSLRWPHLPAL*SNQPGAGCGVRASR
Trigger: TCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATGGGGCCATCGCAGAGATGGGTTCCTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.5
CDS CCA 90 bp CACTGTGGCCTTCACCCTGCCGTATTGGATGCTGTCCTTTCCTGCTaGCCATCCTGCCCTGTCAGGGTCATCCAGAGGAACCTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: HCGLHPAVLDAVLSC*PSCPVRVIQRNLCL
Trigger: CAGACAGAGGTTCCTCTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGGTGAAGGCCACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS-3UTR CAA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCAGGAAAGCCTGGGCCTaGTTGAGGATGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: DRARWALPGQTCVLLGPSRKAWA*LRMLRT
Trigger: AGTTCTCAACATCCTCAACAAGGCCCAGGCTTTCCT...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGTGCGGGCTGGTCCAACTGGAGGAAAGCCTGGGCCTaGTTGAGGATGTTGAGAACT +
Preference number: 5 (lower is better)
Translates to: PRVTSISSTAGCAGWSNWRKAWA*LRMLRT
Trigger: AGTTCTCAACATCCTCAACAAGGCCCAGGCTTTCCT...CCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGACTTCACCCTGCCGTATaGGATGCTGTCCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LGAPQPWRQTAQWLGDSRLHPAV*DAVLSC
Trigger: GCAGGAAAGGACAGCATCCAATACGGCAGGGTGAAG...TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS GCA 90 bp CCAATTGAAGTGTGGATTCCCTCAGGGAAGCTGTCCACATCTGGCTaGAGGGCACAGGCTTCTAGTACTCTCTCCAGCCAGGGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PIEVWIPSGKLSTSG*RAQASSTLSSQGGS
Trigger: GGACCCACCCTGGCTGGAGAGAGTACTAGAAGCCTGTGCCCTGCAGCCAGATGTGGACAGCTTCCCTGAGGGAATCCACACTTCAATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS CCA 90 bp GAAGCTGGTGGTTACCCTGCCGTATTGGATGCTGTCCTTTCCTGCTaGCCATCCTGCCCTGTCAGGGTCATCCAGAGGAACCTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: EAGGYPAVLDAVLSC*PSCPVRVIQRNLCL
Trigger: CAGACAGAGGTTCCTCTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGGTAACCACCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576683.1
ENST00000632055.1
CDS CCA 90 bp GCCCCATTTGCCAGCACTATGATCCAATCAGCCTGGGGCAGGATGTaGAGTGCGTGCGTCACGAGAATCCGTGTTGTTCCCTGGAGTAGC +
Preference number: 5 (lower is better)
Translates to: APFASTMIQSAWGRM*SACVTRIRVVPWSS
Trigger: GCTACTCCAGGGAACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CAA 90 bp GGCCGCAAGCCACCTGAAACCCAGCGTAGAGGAGAAACAGTGGCAGGATGGCCAGTCCTTCTGCCTCATTaGCTCCTCCTGATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GRKPPETQRRGETVAGWPVLLPH*LLLMVV
Trigger: AACCACCATCAGGAGGAGCAAATGAGGCAGAAGGAC...TGGCCATCCTGCCACTGTTTCTCCTCTACGCTGGGTTTCAGGTGGCTTGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GACAGGGCGAGATGGGCCCTGCCCGGGCAGACCTGTGTATTGCTAGGTCCTTCCGCCTTGTTGAGGATGTaGAGAACTGTGAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: DRARWALPGQTCVLLGPSALLRM*RTVRVT
Trigger: TGTGACTCTCACAGTTCTCAACATCCTCAACAAGGC...GGAAGGACCTAGCAATACACAGGTCTGCCCGGGCAGGGCCCATCTCGCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GCTGCCCAGATAGCCTCGTCCGAGTGCTCCTGCAGCAGGTCGAGGTTCATCCGCGCCTTGTTGAGGATGTaGAGAACTGTGAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: AAQIASSECSCSRSRFIRALLRM*RTVRVT
Trigger: TGTGACTCTCACAGTTCTCAACATCCTCAACAAGGC...GCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTATCTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CTAGGAGCACCGCAGCCATGGAGGCAAACAGCCCAATGGCTTGGAGACAGCCGATTCTCAGGGACTGACTaGATGGACCTCTCGCGTCTA +
Preference number: 5 (lower is better)
Translates to: LGAPQPWRQTAQWLGDSRFSGTD*MDLSRL
Trigger: TAGACGCGAGAGGTCCATCAAGTCAGTCCCTGAGAA...TCGGCTGTCTCCAAGCCATTGGGCTGTTTGCCTCCATGGCTGCGGTGCTCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: DSISCGAIDDHGSLPSPAPRSAH*YCSWPG
Trigger: GCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGG...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS CCA 90 bp GCCCCATTTGCCAGCACTATGATCCAATCAGCCTGGGGCAGGATGTaGAGTGCGTGCGTCACGAGAATCCGTGTTGTTCCCTGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: APFASTMIQSAWGRM*SACVTRIRVVPWSS
Trigger: ACTACTCCAGGGAACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000622290.5
CDS-3UTR CAA 90 bp AAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTATCTTAGCCCAAAGAAAGCCTGGGCCTTGTaGAGGATGTTGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: KDTPCTASGSSGRYLSPKKAWAL*RMLRTV
Trigger: CACAGTTCTCAACATCCTCAACAAGGCCCAGGCTTT...CTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACAACTGGAGAACAGAGCATGGTCACTGGGCTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTTGEQSMVTGLATKA*SCTVSR
Trigger: CCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAG...CCCAGTGACCATGCTCTGTTCTCCAGTTGTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS CCA 90 bp ATCTCTGCGATGGCCCCATTTGCCAGCACTATGATCCAATCAGCCTaGGGCAGGATGTGGAGTGCGTGCGTCACGAGAATCCGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: ISAMAPFASTMIQSA*GRMWSACVTRIRVV
Trigger: AACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATGGGGCCATCGCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.5
CDS-3UTR CAA 90 bp TGCAAACACCAGGCCATTCCCCAGGAGCTCCACATTGGCCGCAAGCCACCTGAACAGAAATGTAGACACTaGGAAGGACACCAGCGACAC +
Preference number: 5 (lower is better)
Translates to: CKHQAIPQELHIGRKPPEQKCRH*EGHQRH
Trigger: GTGTCGCTGGTGTCCTTCCAAGTGTCTACATTTCTG...TTCAGGTGGCTTGCGGCCAATGTGGAGCTCCTGGGGAATGGCCTGGTGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGAAAGCCTGGGCCTTGTaGAGGATGTTGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: RVELSMTTGHFHLQHCRLKAWAL*RMLRTV
Trigger: CACAGTTCTCAACATCCTCAACAAGGCCCAGGCTTT...CAGCCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGCTTCACCCTGCCGTATaGGATGCTGTCCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGLHPAV*DAVLSC
Trigger: GCAGGAAAGGACAGCATCCAATACGGCAGGGTGAAG...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCACTGGCCACCAAGGCTTaGAGCTGCACCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPLATKA*SCTVSR
Trigger: CCTGGAGACGGTGCAGCTCAAAGCCTTGGTGGCCAG...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCTCGGTCAGCACACTaGTACTGCAGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLPRSAH*YCSWPG
Trigger: GCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGG...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCATCTGCCACCTGCCCCTaGTCCATGACCAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPSATCP*SMTRTR
Trigger: CCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp GCAGGAGCGAGAGTGATGGGTGTGGTCGGAAAATGGTGGTGGCTATTCCGTATCTTCTCAGGGACTGACTaGATGGACCTCTCGCGTCTA +
Preference number: 5 (lower is better)
Translates to: AGARVMGVVGKWWWLFRIFSGTD*MDLSRL
Trigger: TAGACGCGAGAGGTCCATCAAGTCAGTCCCTGAGAA...GATACGGAATAGCCACCACCATTTTCCGACCACACCCATCACTCTCGCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CAA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTCTGCCACCTGCCCCTaGTCCATGACCAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: TGNRARLLCQCQHPGCDASATCP*SMTRTR
Trigger: CCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACGGGCAGACCTGTGTATaGCTAGGTCCTTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHGQTCV*LGPSGS
Trigger: AGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCC...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp TATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACTGCAGGCTGGTTTTTGTGTCCTaGGAGCTCATCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: YRVELSMTTGHFHLQHCRLVFVS*ELISGG
Trigger: CCCACCAGAGATGAGCTCCAAGGACACAAAAACCAG...CCTGCAGTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CAA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGGCCCAATGACCTGGTaGAAGACATGCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPGPMTW*KTCWPT
Trigger: CGTTGGCCAGCATGTCTTCAACCAGGTCATTGGGCC...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCACACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: TQYRVELSMTTGHFHLQHTVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...GTGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCATCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPSPAWI*KDTPCT
Trigger: TGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGA...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTGAGTCGCTGTTGACATaGGCTGCAGGGTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLESLLT*AAGWTG
Trigger: CCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTC...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CGATGCTGTTCTCTAGGTCTGTCCAGTTGCGAACAACCCACTGCAGTGTCTGGGGCCTTGTTGAGGATGTaGAGAACTGTGAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: RCCSLGLSSCEQPTAVSGALLRM*RTVRVT
Trigger: TGTGACTCTCACAGTTCTCAACATCCTCAACAAGGC...CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456970.6
ENST00000633611.1
CDS-3UTR CAA 90 bp GACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCAGCATCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: DSISCGAIDDHGSLPSPASRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...TGCTGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS-3UTR CAA 90 bp CTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTCCATCTCCATCACGAGAATCCGTGTaGTTCCCTGGAGTAGCCCAC +
Preference number: 5 (lower is better)
Translates to: LDSISCGAIDDHGSLPSPSRESV*FPGVAH
Trigger: GTGGGCTACTCCAGGGAACAACACGGATTCTCGTGA...TGGAGATGGAAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CAA 90 bp GCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACGAATCTCTCTATACGAACCCCTCCACCTTaGACAGCTCCCCAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: ARCYHWVKWGTKYTNLSIRTPPP*TAPQGG
Trigger: CCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTCG...TATAGAGAGATTCGTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACTGCCCTGCTCCCCAATaGAAGTGTGGATTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: QRANTGLDSISCGAIDDHCPAPQ*KCGFPQ
Trigger: CTGAGGGAATCCACACTTCAATTGGGGAGCAGGGCA...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTCTTCACCCTGCCGTATaGGATGCTGTCCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: TGNRARLLCQCQHPGCDALHPAV*DAVLSC
Trigger: GCAGGAAAGGACAGCATCCAATACGGCAGGGTGAAG...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTACCGTGTCTGTCTCCTaGGAGAAGCGGTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: TGNRARLLCQCQHPGCDATVSVS*EKRFSR
Trigger: CCTGCTAAACCGCTTCTCCAAGGAGACAGACACGGT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: QRANTGLDSISCGAIDDHSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000638420.1
CDS CCA 90 bp ACAAAGGCTTTCTCTGCATTCATAGCATTCTCGGCCACCAGAGTGTaGACAGCAAACACCACCAGTGCGACCAGAAATGTAGACACTTGG +
Preference number: 5 (lower is better)
Translates to: TKAFSAFIAFSATRV*TANTTSATRNVDTW
Trigger: CCAAGTGTCTACATTTCTGGTCGCACTGGTGGTGTTTGCTGTCCACACTCTGGTGGCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000632562.1
ENST00000633611.1
CDS-3UTR CAA 90 bp AACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACGGGTCACTTTCCCAGCCATGGAACTaGATGGTCTTCGAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: NTGLDSISCGAIDDHGSLSQPWN*MVFEFL
Trigger: CAGGAACTCGAAGACCATCAAGTTCCATGGCTGGGA...AAGTGACCCGTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCGGGCAGACCTGTGTATaGCTAGGTCCTTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: NRARLLCQCQHPGCDALSGQTCV*LGPSGS
Trigger: AGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCC...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTAGGCAGGAGAATTGCTaGAACCCAGGATGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TGNRARLLCQCQHPGCDARQENC*NPGCGG
Trigger: ACCTCCACATCCTGGGTTCAAGCAATTCTCCTGCCT...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CAA 90 bp AATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCCTTCACCCTGCCGTATaGGATGCTGTCCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: NRARLLCQCQHPGCDALSLHPAV*DAVLSC
Trigger: GCAGGAAAGGACAGCATCCAATACGGCAGGGTGAAG...GGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTGCAGAAGGAGGCCACTaGCTGGCAGAGGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: QDCCVNVNTLAVMLYPRVAEGGH*LAEEEE
Trigger: TTCCTCTTCCTCTGCCAGCAAGTGGCCTCCTTCTGC...AACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS GCA 90 bp CTTGTTGAGGATGTTGAGAACTGTGAGAGTCACAAAGGCTTTCTCTaGATTCATAGCATTCTCGGCCACCAGAGTGTGGACAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: LVEDVENCESHKGFL*IHSILGHQSVDSKH
Trigger: GTGTTTGCTGTCCACACTCTGGTGGCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGTGACTCTCACAGTTCTCAACATCCTCAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000632562.1
ENST00000633611.1
CDS GCA 90 bp TGCTCTGACCAGAGGGTTTGTGGGCATTTATTGGGGAGATCTTTCTaGTGTACCCGAGATCTGTCTATCCATCCCTCATTGTGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: CSDQRVCGHLLGRSF*CTRDLSIHPSLCKG
Trigger: ACCTTTACACAATGAGGGATGGATAGACAGATCTCGGGTACAGCAGAAAGATCTCCCCAATAAATGCCCACAAACCCTCTGGTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS-3UTR CAA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACAGCAGGGACCGGAGTTaGTCTGGAATGTCCACGTCA +
Preference number: 5 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHSRDRS*SGMSTS
Trigger: TGACGTGGACATTCCAGACAAACTCCGGTCCCTGCT...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp TCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCTCTGTTGAATGCTATTGCCTTGTaGTGCCTCCGGGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: SPSHFSIPAMKSRSNSLLNAIAL*CLRAAL
Trigger: CAGTGCAGCCCGGAGGCACAACAAGGCAATAGCATT...CAACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR CAA 90 bp GGTAAAACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGCCTTGTTGAGGATGTaGAGAACTGTGAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: GKTGNRARLLCQCQHPGCALLRM*RTVRVT
Trigger: TGTGACTCTCACAGTTCTCAACATCCTCAACAAGGC...ACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp AATGTCAACACCCTGGCTGTGATGCTTTATCCTAGAGTTTTGCAAGATGTTACCTCTAGGTCTGTCCAGTaGCGAACAACCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: NVNTLAVMLYPRVLQDVTSRSVQ*RTTHCS
Trigger: ACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGA...GGTAACATCTTGCAAAACTCTAGGATAAAGCATCACAGCCAGGGTGTTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp TATCCTTTCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCAATGCTATTGCCTTGTaGTGCCTCCGGGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: YPFSKSFFNPCYEIKEQLNAIAL*CLRAAL
Trigger: CAGTGCAGCCCGGAGGCACAACAAGGCAATAGCATT...GAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGAAAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR CAA 90 bp ATCCTAGAGTTTTGCAAGATGTTACCATTGGGTGAAATGGGGTACCAAGTACACCAGAAATGTAGACACTaGGAAGGACACCAGCGACAC +
Preference number: 5 (lower is better)
Translates to: ILEFCKMLPLGEMGYQVHQKCRH*EGHQRH
Trigger: GTGTCGCTGGTGTCCTTCCAAGTGTCTACATTTCTG...GTGTACTTGGTACCCCATTTCACCCAATGGTAACATCTTGCAAAACTCTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTGAGTCGCTGTTGACATaGGCTGCAGGGTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTESLLT*AAGWTG
Trigger: CCCTGTCCACCCTGCAGCCAATGTCAACAGCGACTC...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTGGCCCAATGACCTGGTaGAAGACATGCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTGPMTW*KTCWPT
Trigger: CGTTGGCCAGCATGTCTTCAACCAGGTCATTGGGCC...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ACGGGAAATCGAGCAAGATTGTTGTGTCAATGTCAACACCCTGGCTGTGATGCTCTTTATCCTAGAGTTTaGCAAGATGTTACCATTGGG +
Preference number: 5 (lower is better)
Translates to: TGNRARLLCQCQHPGCDALYPRV*QDVTIG
Trigger: CCCAATGGTAACATCTTGCAAAACTCTAGGATAAAG...AGCATCACAGCCAGGGTGTTGACATTGACACAACAATCTTGCTCGATTTCCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp CAGAGAGCAAACACAGGTCTAGACTCAATATCGTGTGGAGCTATCGATGACCACCTTTATCCTAGAGTTTaGCAAGATGTTACCATTGGG +
Preference number: 5 (lower is better)
Translates to: QRANTGLDSISCGAIDDHLYPRV*QDVTIG
Trigger: CCCAATGGTAACATCTTGCAAAACTCTAGGATAAAG...GTGGTCATCGATAGCTCCACACGATATTGAGTCTAGACCTGTGTTTGCTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp GGTGAAATGGGGTACCAAGTACACGAATCTCTCTATATTATTGTTTCTTTAACTAATGCTATTGCCTTGTaGTGCCTCCGGGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: GEMGYQVHESLYIIVSLTNAIAL*CLRAAL
Trigger: CAGTGCAGCCCGGAGGCACAACAAGGCAATAGCATT...AGTTAAAGAAACAATAATATAGAGAGATTCGTGTACTTGGTACCCCATTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000620078.4
CDS-3UTR CAA 90 bp ATGTGTGATAAAACTGCATGGGACAAAATAAACACACACACACACAGGAGTACAAAAGCCTGGGCCTTGTaGAGGATGTTGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: MCDKTAWDKINTHTHRSTKAWAL*RMLRTV
Trigger: CACAGTTCTCAACATCCTCAACAAGGCCCAGGCTTT...TGTACTCCTGTGTGTGTGTGTGTTTATTTTGTCCCATGCAGTTTTATCACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS-3UTR CAA 90 bp TCTCCAAGTCATTTTTCAATCCCTGCTATGAAATCAAGGAGCAACTCTCTGTTGTTTTGGTTTCTCATCTaGGCTTTGAAGAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: SPSHFSIPAMKSRSNSLLFWFLI*ALKSGD
Trigger: GTCCCCACTCTTCAAAGCCAAGATGAGAAACCAAAA...CAACAGAGAGTTGCTCCTTGATTTCATAGCAGGGATTGAAAAATGACTTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577103.1
ENST00000632157.1
CDS-3UTR CAA 90 bp GTATCCAAGAGTCTACATGGTATGTTTTGGAAAATGCCAGGTTATGGTAGCTATTCTACATGGTATGTTTaGGAAAATGCCAGGTTATGG +
Preference number: 5 (lower is better)
Translates to: VSKSLHGMFWKMPGYGSYSTWYV*ENARLW
Trigger: CCATAACCTGGCATTTTCCAAAACATACCATGTAGA...ATAGCTACCATAACCTGGCATTTTCCAAAACATACCATGTAGACTCTTGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575728.1
ENST00000600761.3
CDS GCA 72 bp GAGCCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGATGCCCACCTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: EPQQPTGQGGLP*PGPANDAHLPG
Trigger: CCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGGCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS GCA 72 bp GCCCACTGGCCAGGGAGGACTTCCCTGCCCCGGTCCTaGCAACGATGCCCACCTGCCCGGGGTTGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: AHWPGRTSLPRS*QRCPPARGWEE
Trigger: TTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS GCA 72 bp GACTTCCCTGCCCCGGTCCTGCCAACGATGCCCACCTaGCCGGGGTTGGGAGGAAAGGCCTGCTCTGACCAG +
Preference number: 6 (lower is better)
Translates to: DFPAPVLPTMPT*PGLGGKACSDQ
Trigger: CTGGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS GCA 72 bp GAGCCGCAGCAGCCCACTGGCCAGGGAGGACTTCCCTaGCCCGGTCCTGCCAACGATGCCCACCTGTTTAGG +
Preference number: 6 (lower is better)
Translates to: EPQQPTGQGGLP*PGPANDAHLFR
Trigger: CCTAAACAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS CCA 72 bp AAGAGGAGGCCGGAGGTCCGCAAGGCGCCCAGCTCCTaGCCTCGGATGCCCAGGACTCTGTCCAGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: KRRPEVRKAPSS*PRMPRTLSRKA
Trigger: AGCCTTTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTTGCGGACCTCCGGCCTCCTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000632562.1
ENST00000633611.1
CDS CCA 72 bp CCCCGGTCCTGCCAACGATGCCCACCTGCCCGGGGTTaGGAGGAAAGGCCTGCTCTGACCAGAGGGTTTGTG +
Preference number: 6 (lower is better)
Translates to: PRSCQRCPPARG*EERPALTRGFV
Trigger: CACAAACCCTCTGGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS GCA 72 bp GTGGCAGGATGGCCACAGTGGCAGTGGGGTAGCCACTaGCACCACCAGGCTGACCTCCAGGAGTCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: VAGWPQWQWGSH*HHQADLQESKG
Trigger: GCCTTTGGACTCCTGGAGGTCAGCCTGGTGGTGGCAGTGGCTACCCCACTGCCACTGTGGCCATCCTGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638420.1
CDS CAA 72 bp CCACAGCACCCTCGATGCTCACGAACCCCTCCACCTTaGACAGCTCCCCAAGGAGGGCGGACAGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: PQHPRCSRTPPP*TAPQGGRTAGR
Trigger: CCTCCCTGCTGTCCGCCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTCGTGAGCATCGAGGGTGCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS TCA 72 bp AGACCACGATCCAGACGAGAGGCAGCCACAGCCCGTTaGGGTAGAGGACGCTCTCGGTCAGCCGCTGCACGT +
Preference number: 6 (lower is better)
Translates to: RPRSRREAATAR*GRGRSRSAAAR
Trigger: ACGTGCAGCGGCTGACCGAGAGCGTCCTCTACCTCAACGGGCTGTGGCTGCCTCTCGTCTGGATCGTGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000574094.6
ENST00000620078.4
ENST00000622290.5
ENST00000632562.1
ENST00000633611.1
CDS TCA 72 bp CACAGCACCCTCGATGCTCACGAACCCCTCCACCTTTaGCAGCTCCCCAAGGAGGGCGGACAGCAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: HSTLDAHEPLHL*QLPKEGGQQGG
Trigger: TCCTCCCTGCTGTCCGCCCTCCTTGGGGAGCTGTCAAAGGTGGAGGGGTTCGTGAGCATCGAGGGTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS TCA 72 bp GTGCCCATCATCCGGTCTTCTCTCCTGCGTGGATCTTaGAGGACACGCCCTGCACAGCCAGCGGGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: VPIIRSSLLRGS*RTRPAQPAGAQ
Trigger: CTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGACCGGATGATGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS CCA 72 bp CCACATCACCCACCGCACTGGCCTTTCTGGAGCCGCTaGACAGAGCCAGGACCTTTCTGTACACCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: PHHPPHWPFWSR*TEPGPFCTPGQ
Trigger: CTGGCCTGGTGTACAGAAAGGTCCTGGCTCTGTCCAGCGGCTCCAGAAAGGCCAGTGCGGTGGGTGATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000574094.6
ENST00000620078.4
ENST00000622290.5
ENST00000632562.1
ENST00000633611.1
CDS CCA 72 bp CTCCAGTGTGCCCATCATCCGGTCTTCTCTCCTGCGTaGATCTTGAAGGACACGCCCTGCACAGCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: LQCAHHPVFSPA*ILKDTPCTASG
Trigger: CCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGACCGGATGATGGGCACACTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS CCA 72 bp CAGCGTAGAGGAGAAACAGTGGCAGGATGGCCACAGTaGCAGTGGGGTAGCCACTGCCACCACCAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: QRRGETVAGWPQ*QWGSHCHHQAD
Trigger: GTCAGCCTGGTGGTGGCAGTGGCTACCCCACTGCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638420.1
CDS GCA 72 bp CCAGGTGCACTGTGGCCTTCACCCTGCCGTATTGGATaGTGTCCTTTCCTGCTGGCCATCCTGCCCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PGALWPSPCRIG*CPFLLAILPCQ
Trigger: CTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGGTGAAGGCCACAGTGCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS CCA 72 bp GAGGGGTGGGTGAAGCTGGTGGTTACCCTGCCGTATTaGATGCTGTCCTTTCCTGCTGGCCATCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: EGWVKLVVTLPY*MLSFPAGHPAL
Trigger: CAGGGCAGGATGGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGGTAACCACCAGCTTCACCCACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576683.1
ENST00000632055.1
CDS CAA 72 bp GGAGGGGTGGGTGAAGCTGGTGGTTACCCTGCCGTATaGGATGCTGTCCTTTCCTGCTGGCCATCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: GGVGEAGGYPAV*DAVLSCWPSCP
Trigger: AGGGCAGGATGGCCAGCAGGAAAGGACAGCATCCAATACGGCAGGGTAACCACCAGCTTCACCCACCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576683.1
ENST00000632055.1
CDS CAA 72 bp TGTGCCCATCATCCGGTCTTCTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: CAHHPVFSPAWI*KDTPCTASGSS
Trigger: TGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGACCGGATGATGGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS CAA 90 bp TTGCTCCAGTGTGCCCATCATCCGGTCTTCTCTCCTGCGTGGATCTaGAAGGACACGCCCTGCACAGCCAGCGGGAGCTCAGGTCGGTAT +
Preference number: 6 (lower is better)
Translates to: LLQCAHHPVFSPAWI*KDTPCTASGSSGRY
Trigger: ATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGACCGGATGATGGGCACACTGGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5
CDS CCA 72 bp GCAAGCCACCTGAAACCCAGCGTAGAGGAGAAACAGTaGCAGGATGGCCACAGTGGCAGTGGGGTAGCCACT +
Preference number: 6 (lower is better)
Translates to: ASHLKPSVEEKQ*QDGHSGSGVAT
Trigger: AGTGGCTACCCCACTGCCACTGTGGCCATCCTGCCACTGTTTCTCCTCTACGCTGGGTTTCAGGTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638420.1
CDS GCA 72 bp GCCGTATTGGATGCTGTCCTTTCCTGCTGGCCATCCTaGCCTGTCAGGGTCATCCAGAGGAACCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: AVLDAVLSCWPS*PVRVIQRNLCL
Trigger: CAGACAGAGGTTCCTCTGGATGACCCTGACAGGGCAGGATGGCCAGCAGGAAAGGACAGCATCCAATACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000576683.1
ENST00000620078.4
ENST00000622290.5
ENST00000632055.1
ENST00000633611.1
CDS CCA 72 bp GCCAGCACTATGATCCAATCAGCCTGGGGCAGGATGTaGAGTGCGTGCGTCACGAGAATCCGTGTTGTTCCC +
Preference number: 6 (lower is better)
Translates to: ASTMIQSAWGRM*SACVTRIRVVP
Trigger: GGGAACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.5
CDS GCA 72 bp TCTAGTACTCTCTCCAGCCAGGGTGGGTCCAGCTCCTaGCCGAAGCACACATTCTCTACCACAGAGGTGTTC +
Preference number: 6 (lower is better)
Translates to: SSTLSSQGGSSS*PKHTFSTTEVF
Trigger: GAACACCTCTGTGGTAGAGAATGTGTGCTTCGGGCAGGAGCTGGACCCACCCTGGCTGGAGAGAGTACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000633611.1
CDS GCA 72 bp CACTATGATCCAATCAGCCTGGGGCAGGATGTGGAGTaGGTGCGTCACGAGAATCCGTGTTGTTCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: HYDPISLGQDVE*VRHENPCCSLE
Trigger: CTCCAGGGAACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.5
CDS GCA 72 bp CTCCTGGTAGGAACCCATCTCTGCGATGGCCCCATTTaGCAGCACTATGATCCAATCAGCCTGGGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: LLVGTHLCDGPI*QHYDPISLGQD
Trigger: ATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATGGGGCCATCGCAGAGATGGGTTCCTACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.5
CDS GCA 72 bp ATGATCCAATCAGCCTGGGGCAGGATGTGGAGTGCGTaGGTCACGAGAATCCGTGTTGTTCCCTGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: MIQSAWGRMWSA*VTRIRVVPWSS
Trigger: GCTACTCCAGGGAACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620078.4
CDS CCA 72 bp ATGGCCCCATTTGCCAGCACTATGATCCAATCAGCCTaGGGCAGGATGTGGAGTGCGTGCGTCACGAGAATC +
Preference number: 6 (lower is better)
Translates to: MAPFASTMIQSA*GRMWSACVTRI
Trigger: GATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCATAGTGCTGGCAAATGGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000205557.12
ENST00000620078.4
ENST00000622290.5
CDS GCA 72 bp ATGATCCAATCAGCCTGGGGCAGGATGTGGAGTGCGTaGGTCACGAGAATCCGTGTTGTTCCCTGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: MIQSAWGRMWSA*VTRIRVVPWSS
Trigger: ACTACTCCAGGGAACAACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGATTGGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205557.12
ENST00000622290.5
CDS GCA 72 bp GATGTTGAGAACTGTGAGAGTCACAAAGGCTTTCTCTaGATTCATAGCATTCTCGGCCACCAGAGTGTGGAC +
Preference number: 6 (lower is better)
Translates to: DVENCESHKGFL*IHSILGHQSVD
Trigger: GTCCACACTCTGGTGGCCGAGAATGCTATGAATGCAGAGAAAGCCTTTGTGACTCTCACAGTTCTCAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205557.12
ENST00000456970.6
ENST00000620078.4
ENST00000622290.5
ENST00000632562.1
ENST00000633611.1
CDS CAA 90 bp GGGAGATCTTTCTGCTGTACCCGAGATCTGTCTATCCATCCCTCATaGTGTAAAGGTCTACCTTCCATCTCTCTTTCCATCTGTCTACCT +
Preference number: 6 (lower is better)
Translates to: GRSFCCTRDLSIHPS*CKGLPSISLSICLP
Trigger: AGGTAGACAGATGGAAAGAGAGATGGAAGGTAGACCTTTACACAATGAGGGATGGATAGACAGATCTCGGGTACAGCAGAAAGATCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576204.6
ENST00000612904.3
CDS CAA 72 bp TGTTTAGGCACCGGAAGTATAGAAATTAAAGAGTCCTaGCTCCAGTGTGCCCATCATCCGGTCTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: CLGTGSIEIKES*LQCAHHPVFSP
Trigger: AGGAGAGAAGACCGGATGATGGGCACACTGGAGCAAGGACTCTTTAATTTCTATACTTCCGGTGCCTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622290.5