RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000197150

Ensembl transcript IDs: ENST00000297504.10, ENST00000358849.9, ENST00000461373.5, ENST00000462605.5, ENST00000466514.5, ENST00000466956.5, ENST00000469410.1, ENST00000470645.5, ENST00000471796.5, ENST00000472698.1, ENST00000477092.5, ENST00000477719.5, ENST00000482309.5, ENST00000482899.1, ENST00000488370.1, ENST00000488551.5, ENST00000488826.1, ENST00000489192.5, ENST00000491920.1, ENST00000498578.5, ENST00000542328.5

Found 1503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCGCTCCAGCAGGGAAGCCACGGTGGT +
Preference number: 1 (lower is better)
Translates to: GVKGAQVPPIQHHHA*RGVVEALQQGSHGG
Trigger: ACCACCGTGGCTTCCCTGCTGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 90 bp AGCACCAGGTACCCGAAGGTCAGCAGTCCCTGCGAAAGAGCCCAGTaGACTCAGGGATGCCTCGGGTGGCTCCTCGGCGGTCCCCAGCCC +
Preference number: 1 (lower is better)
Translates to: STRYPKVSSPCERAQ*TQGCLGWLLGGPQP
Trigger: GGGCTGGGGACCGCCGAGGAGCCACCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCAGGGACTGCTGACCTTCGGGTACCTGGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR GCA 90 bp GTTGGAAAGCCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCTCCTC +
Preference number: 1 (lower is better)
Translates to: VGKPLEQGDAAAQLL*PAAAGFQLCPIALL
Trigger: GAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 90 bp GTTGGAAAGCCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCCTGGT +
Preference number: 1 (lower is better)
Translates to: VGKPLEQGDAAAQLL*PAAAGFQLCPIAPG
Trigger: ACCAGGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 90 bp GCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTaGGCAATTACCAGCACCGTGCGGCCTGCACTGGCCCGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: AMTTMQWAPRTVLSR*AITSTVRPALARSR
Trigger: CCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR TCA 90 bp GAGGGATTGGCCTCCCCTGCCAGCTGCTCGGCCCCGGCTTTATTGTaGGCAGGAGCAGCCGCAGCGACTCTCCACATGCTGGCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: EGLASPASCSAPALL*AGAAAATLHMLALL
Trigger: CAGGAGGGCCAGCATGTGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR TCA 90 bp GCGGTGGGGCCGCTGTCCTCGGGGCATCCAGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGCCTTTCTTCAGGAGCTCTTCATGTG +
Preference number: 1 (lower is better)
Translates to: AVGPLSSGHPGPASG*ARRIARLSSGALHV
Trigger: CACATGAAGAGCTCCTGAAGAAAGGCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCCGAGGACAGCGGCCCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR TCA 90 bp TGCCCACTCCCATCAGGGCTGGTGTGGCCACCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGGACAGGGACACCAGGCAGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: CPLPSGLVWPPSAAA*GVSTAWTGTPGSLP
Trigger: TGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 90 bp GTCCCAGCCTCCCAGACACGGCCATCGGCCATGACGACAATGCAGTaGGCCCCACGGACAGTGCTGAGCCGGTGGGCAATTACCAGCACC +
Preference number: 1 (lower is better)
Translates to: VPASQTRPSAMTTMQ*APRTVLSRWAITST
Trigger: GGTGCTGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTGTCTGGGAGGCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 90 bp CTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTaGTGGGGATGCTGGCCTGTCCACAGCCGCACCCTCCTGGACCGA +
Preference number: 1 (lower is better)
Translates to: LRMSAFPFQGAPPRT*WGCWPVHSRTLLDR
Trigger: TCGGTCCAGGAGGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp CCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTaGGAAAGAGCCCAGTGCACTCAGGGATGCCTCGGGTGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: PTWDSSTRYPKVSSP*ERAQCTQGCLGWLL
Trigger: GAGGAGCCACCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR GCA 90 bp CAGCGTGAGGCGTGTCGACAGCATGGACAGGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCGCAGCCCCTGGGAGATGACAAGCTT +
Preference number: 1 (lower is better)
Translates to: QREACRQHGQGHQAA*HLGAASQPLGDDKL
Trigger: AAGCTTGTCATCTCCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 90 bp CATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGCGATCTGCTCCTGACACTGGCGAGA +
Preference number: 1 (lower is better)
Translates to: HGEGTHSPHIAQGLV*YAHCPGDLLLTLAR
Trigger: TCTCGCCAGTGTCAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 90 bp CCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCT +
Preference number: 1 (lower is better)
Translates to: PLPVAPWRRHAQSAH*PGPRLLRPLPWRSA
Trigger: AGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 90 bp CCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCA +
Preference number: 1 (lower is better)
Translates to: PLPVAPWRRHAQSAH*PGPRLLRPLPWRSA
Trigger: TGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 90 bp CAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTaGAAGACAGCCAGGCAGGCTGGCGCTTCTCGTGGGAACTGGCCA +
Preference number: 1 (lower is better)
Translates to: QSQWVKDARHTGQGR*KTARQAGASRGNWP
Trigger: TGGCCAGTTCCCACGAGAAGCGCCAGCCTGCCTGGCTGTCTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp CCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTaGAGCCTAGCCCCCTCATCCACAGTCTCAGGGCCACAGGCGCCC +
Preference number: 1 (lower is better)
Translates to: PRTYLCAFPGPSEAS*SLAPSSTVSGPQAP
Trigger: GGGCGCCTGTGGCCCTGAGACTGTGGATGAGGGGGCTAGGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp CTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGCGAA +
Preference number: 1 (lower is better)
Translates to: LKRALRMSTAMRSPT*DSSTRYPKVSSPCE
Trigger: TTCGCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR CCA 90 bp CTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGACA +
Preference number: 1 (lower is better)
Translates to: LKRALRMSTAMRSPT*DSSTRYPKVSSPWT
Trigger: TGTCCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482309.5
3UTR TCA 90 bp TGCCGGTACCTGCTCCTGACACTGGCGAGACAATTTTCGGAGGCCTaGGCCCATCAGGGTGCCCACTCCCATCAGGGCTGGTGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: CRYLLLTLARQFSEA*AHQGAHSHQGWCGH
Trigger: GTGGCCACACCAGCCCTGATGGGAGTGGGCACCCTGATGGGCTCAGGCCTCCGAAAATTGTCTCGCCAGTGTCAGGAGCAGGTACCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR GCA 90 bp GTGACAGCGGCACCAACATGGGGAGGGCTGATGCATCTGCAGCAGTaGAGGGACACGAGGTCCTGCTGGGGCACCAGTTCAGCCAAGGAC +
Preference number: 1 (lower is better)
Translates to: VTAAPTWGGLMHLQQ*RDTRSCWGTSSAKD
Trigger: GTCCTTGGCTGAACTGGTGCCCCAGCAGGACCTCGTGTCCCTGCACTGCTGCAGATGCATCAGCCCTCCCCATGTTGGTGCCGCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp TGTGGAGCGAAGGCCGAGGCGAGGTTAGGAAGACGGCGCGGCTCCTaGGGTCTAGCTCTTCCAGCTGGACTAGCCAAGGGGTTTCACTGC +
Preference number: 1 (lower is better)
Translates to: CGAKAEARLGRRRGS*GLALPAGLAKGFHC
Trigger: GCAGTGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAGACCGCAGGAGCCGCGCCGTCTTCCTAACCTCGCCTCGGCCTTCGCTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp GCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTaGCCTGTCCACAGCCGCACCCTCCTGGACCGATTCTGTACTGGA +
Preference number: 1 (lower is better)
Translates to: AFPFQGAPPRTCWGC*PVHSRTLLDRFCTG
Trigger: TCCAGTACAGAATCGGTCCAGGAGGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp CCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTaGCTGGATAGGGGAAGGATCCCAGTAGGAAGTGACAGCGGCACC +
Preference number: 1 (lower is better)
Translates to: PAQGNRAPCSPTAWM*LDRGRIPVGSDSGT
Trigger: GGTGCCGCTGTCACTTCCTACTGGGATCCTTCCCCTATCCAGCCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp GCCGCACCCAAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTaGGGGTGCAGAAACTGCCAGAAGAGCTTCCAGTTAAAGCGAGAC +
Preference number: 1 (lower is better)
Translates to: AAPKASTTATPRTSR*GCRNCQKSFQLKRD
Trigger: GTCTCGCTTTAACTGGAAGCTCTTCTGGCAGTTTCTGCACCCCCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR TCA 90 bp CAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGCTaGGGCCCTACTCTGGGCTGCCCTAAGGAGGGGTTTAGCTGTGAA +
Preference number: 1 (lower is better)
Translates to: QANKQGPSRACGLAS*GPTLGCPKEGFSCE
Trigger: TTCACAGCTAAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp TCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATaGTGGCCTGTCCACAGCCGCACCCTCCTGGACCGATTCTGTACT +
Preference number: 1 (lower is better)
Translates to: SAFPFQGAPPRTCWG*WPVHSRTLLDRFCT
Trigger: AGTACAGAATCGGTCCAGGAGGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp CATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGCGATCTGCAAGGAGTCCAGGAAACA +
Preference number: 1 (lower is better)
Translates to: HGEGTHSPHIAQGLV*YAHCPGDLQGVQET
Trigger: TGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 90 bp ACAGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTaGAGCGAAGGCCGAGGCGAGGTTAGGAAGACGGCGCGGCTCCTG +
Preference number: 1 (lower is better)
Translates to: TGIQHQAQLGSHSPL*SEGRGEVRKTARLL
Trigger: CAGGAGCCGCGCCGTCTTCCTAACCTCGCCTCGGCCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR TCA 90 bp CGCAGGCAGCAGAACTGGGACGAGCAGGGAACCAAGTCTGCAGTCTaGCTCCAGCACCCAGGCTGGCTCTACTCTGCCAGTGTGCCATGT +
Preference number: 1 (lower is better)
Translates to: RRQQNWDEQGTKSAV*LQHPGWLYSASVPC
Trigger: ACATGGCACACTGGCAGAGTAGAGCCAGCCTGGGTGCTGGAGTCAGACTGCAGACTTGGTTCCCTGCTCGTCCCAGTTCTGCTGCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470645.5
ENST00000488551.5
3UTR TCA 90 bp GTGGGGAGGGTGAAGAGGATGGCCAGGAATGCCGGTACCTGCTCCTaGCACTGGCGAGACAATTTTCGGAGGCCTGAGCCCATCAGGGTG +
Preference number: 1 (lower is better)
Translates to: VGRVKRMARNAGTCS*HWRDNFRRPEPIRV
Trigger: CACCCTGATGGGCTCAGGCCTCCGAAAATTGTCTCGCCAGTGTCAGGAGCAGGTACCGGCATTCCTGGCCATCCTCTTCACCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR GCA 90 bp TGGGGAGGGCTGATGCATCTGCAGCAGTGCAGGGACACGAGGTCCTaGTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCC +
Preference number: 1 (lower is better)
Translates to: WGGLMHLQQCRDTRS*WGTSSAKDLLVCLS
Trigger: GGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGGACCTCGTGTCCCTGCACTGCTGCAGATGCATCAGCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp GTCTGGGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAGCCCCCAATAAATAGGGTACCCAAG +
Preference number: 1 (lower is better)
Translates to: VWEATRKDMRSPPVS*CPATREPPINRVPK
Trigger: CTTGGGTACCCTATTTATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 90 bp ACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTaGCCTGGCGATCTGCAAGGAGTCCAGGAAACAGGACAAGGAGTC +
Preference number: 1 (lower is better)
Translates to: THSPHIAQGLVCYAH*PGDLQGVQETGQGV
Trigger: GACTCCTTGTCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 90 bp GGAGGGCTGATGCATCTGCAGCAGTGCAGGGACACGAGGTCCTGCTaGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGG +
Preference number: 1 (lower is better)
Translates to: GGLMHLQQCRDTRSC*GTSSAKDLLVCLSR
Trigger: CCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGGACCTCGTGTCCCTGCACTGCTGCAGATGCATCAGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTaGATGTGGCTGGATAGGGGAAGGATCCCAGTAGGAAGTGACAGC +
Preference number: 1 (lower is better)
Translates to: SSPAQGNRAPCSPTA*MWLDRGRIPVGSDS
Trigger: GCTGTCACTTCCTACTGGGATCCTTCCCCTATCCAGCCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp ACTGCTGGGCCACCTGTCTGTCCTCCCAACAGGACACAAGCTTCATaGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCA +
Preference number: 1 (lower is better)
Translates to: TAGPPVCPPNRTQAS*GQGLSSFPIVGSMA
Trigger: TGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCATGAAGCTTGTGTCCTGTTGGGAGGACAGACAGGTGGCCCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp GTGTGGGGACAGGGGTCAGCTTGTCATCCCTGGAAGTGGCAGGCATaGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCAT +
Preference number: 1 (lower is better)
Translates to: VWGQGSACHPWKWQA*GRAAHTACQGWSFH
Trigger: ATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGATGACAAGCTGACCCCTGTCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
3UTR CCA 90 bp CAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTaGCGATCTGCAAGGAGTCCAGGAAACAGGACAAGGAGTCCAGAA +
Preference number: 1 (lower is better)
Translates to: QSAHCPGPRLLRPLP*RSARSPGNRTRSPE
Trigger: TTCTGGACTCCTTGTCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR TCA 90 bp GGGTGTTCTTGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTaGAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGACAGCCA +
Preference number: 1 (lower is better)
Translates to: GCSWCRWRLVHNLSG*KTPGTQGRAGGRQP
Trigger: TGGCTGTCTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAGAACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp ATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATaGATGGAATGTCACAGCCTGCAGCGGAAGGGAATTCGGACAGGG +
Preference number: 1 (lower is better)
Translates to: MGKGSSHSLSRMVLP*MECHSLQRKGIRTG
Trigger: CCCTGTCCGAATTCCCTTCCGCTGCAGGCTGTGACATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR GCA 90 bp TGGAAAGAGAAACGGTGTGGGGAGGGTGAAGAGGATGGCCAGGAATaGCGGTACCTGCTCCTGACACTGGCGAGACAATTTTCGGAGGCC +
Preference number: 1 (lower is better)
Translates to: WKEKRCGEGEEDGQE*RYLLLTLARQFSEA
Trigger: GGCCTCCGAAAATTGTCTCGCCAGTGTCAGGAGCAGGTACCGGCATTCCTGGCCATCCTCTTCACCCTCCCCACACCGTTTCTCTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR GCA 90 bp ACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTaGAAGGAGTCCAGGAAACAGGACAAGGAGTCCAGAAAACAGGAC +
Preference number: 1 (lower is better)
Translates to: TLPRASSATPIALAI*KESRKQDKESRKQD
Trigger: GTCCTGTTTTCTGGACTCCTTGTCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 90 bp CATCTAGTTCTAAACCACACCCACAAGAGCCCGTGGGTCCCACTCTaGCTCCTGCACGCAAACTTGAGCCACTGCTGCCTCTTCCAGGCT +
Preference number: 1 (lower is better)
Translates to: HLVLNHTHKSPWVPL*LLHANLSHCCLFQA
Trigger: AGCCTGGAAGAGGCAGCAGTGGCTCAAGTTTGCGTGCAGGAGCCAGAGTGGGACCCACGGGCTCTTGTGGGTGTGGTTTAGAACTAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp ATGGTTCCACCAGCCAAACGTGTGCACACACCATGCTGCAACTGCTaGGCCACCTGTCTGTCCTCCCAACAGGACACAAGCTTCATGGGG +
Preference number: 1 (lower is better)
Translates to: MVPPAKRVHTPCCNC*ATCLSSQQDTSFMG
Trigger: CCCCATGAAGCTTGTGTCCTGTTGGGAGGACAGACAGGTGGCCCAGCAGTTGCAGCATGGTGTGTGCACACGTTTGGCTGGTGGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp AGGTGGGTGCTGAGATTCTGGGACTCAGTCATGAAACTCCCTACGTaGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: RWVLRFWDSVMKLPT*SLVYLATTSTSWPR
Trigger: CCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR CCA 90 bp GGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATGCATaGAATGTCACAGCCTGCAGCGGAAGGGAATTCGGACAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: GRAAHTACQGWSFHA*NVTACSGREFGQGA
Trigger: TGCACCCTGTCCGAATTCCCTTCCGCTGCAGGCTGTGACATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR CCA 90 bp AAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATaGTCCTTCCATGCATGGAATGTCACAGCCTGCAGCGGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: KWQAWGRAAHTACQG*SFHAWNVTACSGRE
Trigger: TTCCCTTCCGCTGCAGGCTGTGACATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR GCA 90 bp GGCAAAGGGAGAATAGAGTGGAGGTGTCTCGTGGAACTCTGTCTCTaGCCATTGCAGCCCAATGACTCTGGCAGACTCTGGTGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: GKGRIEWRCLVELCL*PLQPNDSGRLWWEG
Trigger: TCCCTCCCACCAGAGTCTGCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGAGTTCCACGAGACACCTCCACTCTATTCTCCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp CTCCCATCTCCTTCAGTGCTGGGTGTTCTTGGTGTAGATGGAGGCTaGTTCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCA +
Preference number: 1 (lower is better)
Translates to: LPSPSVLGVLGVDGG*FTISVGERRQAHRA
Trigger: TGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAGAACACCCAGCACTGAAGGAGATGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR TCA 90 bp CCACCCTTCTTTACACAGGGTAAATCCAGAATGCTTGCCTGGCTGTaGAGGTGCATTGCAGGTACCACCTCTTCTCCTGCCCAGGGGAAC +
Preference number: 1 (lower is better)
Translates to: PPFFTQGKSRMLAWL*RCIAGTTSSPAQGN
Trigger: GTTCCCCTGGGCAGGAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCTGTGTAAAGAAGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp CGCAGCCCCTGGGAGATGACAAGCTTGAAGGATGACTTAAACTCCTaGACGTCAGTTGTCAAGCGGCTCACCAGCTGCCCTGTCTTATTG +
Preference number: 1 (lower is better)
Translates to: RSPWEMTSLKDDLNS*TSVVKRLTSCPVLL
Trigger: CAATAAGACAGGGCAGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGTTTAAGTCATCCTTCAAGCTTGTCATCTCCCAGGGGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 90 bp GGTTTAGCTGTGAACCAGCCCCAGGCTCTGCTCCTGGACCTCCACTaGTTAAAGACACAGCCTCTGATCTGTCAGGAAGTGGGATATCAA +
Preference number: 1 (lower is better)
Translates to: GLAVNQPQALLLDLH*LKTQPLICQEVGYQ
Trigger: TTGATATCCCACTTCCTGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGGGGCTGGTTCACAGCTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp GATGACTTAAACTCCTGCACGTCAGTTGTCAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCAAAGAAGGTGATGTCTTGTCGGAGC +
Preference number: 1 (lower is better)
Translates to: DDLNSCTSVVKRLTS*PVLLASKKVMSCRS
Trigger: GCTCCGACAAGACATCACCTTCTTTGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGTTTAAGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR TCA 90 bp TCCCAGCAGCACCAGCTGCTCCATCAATGCACTGTATCACACCCCTaGAAGAGGGTACCACCCTTCTTTACACAGGGTAAATCCAGAATG +
Preference number: 1 (lower is better)
Translates to: SQQHQLLHQCTVSHP*KRVPPFFTQGKSRM
Trigger: CATTCTGGATTTACCCTGTGTAAAGAAGGGTGGTACCCTCTTTCAGGGGTGTGATACAGTGCATTGATGGAGCAGCTGGTGCTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 90 bp CCTGAAAGAGGGTACCACCCTTCTTTACACAGGGTAAATCCAGAATaGTTGCCTGGCTGTGAAGGTGCATTGCAGGTACCACCTCTTCTC +
Preference number: 1 (lower is better)
Translates to: PERGYHPSLHRVNPE*LPGCEGALQVPPLL
Trigger: GAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCTGTGTAAAGAAGGGTGGTACCCTCTTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR TCA 90 bp CTCCCCAGAGCCACAGTGCCATGCTTTGCAAGTATTTACTGTAGATaGTCCCACTCACACTCTCAAAACAGGCATTCAGCATCAAGCACA +
Preference number: 1 (lower is better)
Translates to: LPRATVPCFASIYCR*SHSHSQNRHSASST
Trigger: TGTGCTTGATGCTGAATGCCTGTTTTGAGAGTGTGAGTGGGATCATCTACAGTAAATACTTGCAAAGCATGGCACTGTGGCTCTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 90 bp TGCACATACCATAGTTTATTTAATGACTCCCCCACTGATGGGCACTaGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTATCAT +
Preference number: 1 (lower is better)
Translates to: CTYHSLFNDSPTDGH*GCPVFPLQTMLPYH
Trigger: ATGATACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGGGGGAGTCATTAAATAAACTATGGTATGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGGGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: PRSCSLGTQQPPDSGMQGGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...CCCCTGCATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG
71% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR GCA 90 bp CTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: LMKPTTWPRSQEGSRVRRAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...CCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp TGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCGGCAGCCGGCAGGACTaGGGAGGGGAGGGAGGGATT +
Preference number: 2 (lower is better)
Translates to: WPRSQEGSRVRRSRPSSIGSRQD*GGEGGI
Trigger: AATCCCTCCCTCCCCTCCCCAGTCCTGCCGGCTGCC...GATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR GCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCAC +
Preference number: 2 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSKDPGT*TQPPDH
Trigger: GTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTT...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp ATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: MKPTTWPRSQEGSRVRRSAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...GGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GGCTCCTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: GSWLMKPTTWPRSQEGSRAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...CCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GCCCACGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: AHEGHDLARGQRQGEVFQAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...CTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp AGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 2 (lower is better)
Translates to: RRGQGCAGPAHPASPRLPPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...CGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGA +
Preference number: 2 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSGAASG*SLSAPR
Trigger: TCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCC...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp TGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 2 (lower is better)
Translates to: WPRSQEGSRVRRSRPSSIACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...GATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 2 (lower is better)
Translates to: GVQGHVLKDPGTCTQPPDVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp ATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTGGGCGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 2 (lower is better)
Translates to: IGHDDNAVGPTDSAEPVGASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...GCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR GCA 90 bp AGCAGCGTGAGGCGTGTCGACAGCATGGACAGGGACACCAGGCAGCCTGCCACCCAGTGCACTCAGGGATaGCTCGGGTGGCTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: SSVRRVDSMDRDTRQPATQCTQG*LGWLLG
Trigger: GCCGAGGAGCCACCCGAGGCATCCCTGAGTGCACTG...GGTGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR CCA 90 bp ATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGACTCTCCACATGCTaGCCCTCCTGGGGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: MKPTTWPRSQEGSRVRRSRLSTC*PSWGLS
Trigger: ACTGAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCG...GGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGGCAGCCGGCAGGACTaGGGAGGGGAGGGAGGGATT +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFGSRQD*GGEGGI
Trigger: AATCCCTCCCTCCCCTCCCCAGTCCTGCCGGCTGCC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR-3UTR CCA 90 bp CCCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTGCACCAGGGATGCCTCGGGTaGCTCCTCGGCGGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: PPDHLPKQDREVGHGPLHQGCLG*LLGGPQ
Trigger: CTGGGGACCGCCGAGGAGCCACCCGAGGCATCCCTG...GTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR CCA 90 bp AGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: RRGQGCAGPAHPASPRLPMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...CGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GCCCACGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: AHEGHDLARGQRQGEVFQRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...CTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp TGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: CNGATQLLFGDAAAPRQWRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...CCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp CTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 2 (lower is better)
Translates to: LHGEGTHSPHIAQGLVCYVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR-3UTR GCA 90 bp CTGGATAGGGGAAGGATCCCAGTAGGAAGTGACAGCGGCACCAACATGGGGAGGGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: LDRGRIPVGSDSGTNMGRGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...CCTCCCCATGTTGGTGCCGCTGTCACTTCCTACTGGGATCCTTCCCCTATCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp ATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTCAGGACTTGTGCTGGTGGCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 2 (lower is better)
Translates to: MLGSDHTSGGPSQDLCWWRGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...CCACCAGCACAAGTCCTGAGAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCACTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 2 (lower is better)
Translates to: LADEADNLAPEPGGVKGAHSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGTG...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 2 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR CCA 90 bp ATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAGGCGCTGCTTCCACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: ISTVGCLIRARAMARRCFHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...GAAGCAGCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp CCAGAAGAGCTTCCAGTTAAAGCGAGACCCCACGACATGGGGTGTGGAGCTGGCAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: PEELPVKARPHDMGCGAGSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...GCCAGCTCCACACCCCATGTCGTGGGGTCTCGCTTTAACTGGAAGCTCTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR CAA 90 bp TGGAAGACAGCCAGGCAGGCTGGCGCTTCTCGTGGGAACTGGCCATaGTGGCCCCGTCCCTCCTACCCTGACCCAAGTGTTGGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: WKTARQAGASRGNWP*WPRPSYPDPSVGPC
Trigger: ACAGGGCCCAACACTTGGGTCAGGGTAGGAGGGACGGGGCCACAATGGCCAGTTCCCACGAGAAGCGCCAGCCTGCCTGGCTGTCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 90 bp TCCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATaGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGC +
Preference number: 2 (lower is better)
Translates to: SSSRCSMAKARTVRT*PRASSATPIALAIC
Trigger: GCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCCCGTCCCTCCTACCCTaGCCCAAGTGTTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPPSLLP*PKCWAL
Trigger: CAGGGCCCAACACTTGGGTCAGGGTAGGAGGGACGG...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp CCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCATGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: PGARRGQGCAGPAHPASPWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...TGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp CTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGCCCCATAGCGCCTGGTaGGAGAGACCAGTGCATTCA +
Preference number: 2 (lower is better)
Translates to: LMKPTTWPRSQEGSRVRRPHSAW*ERPVHS
Trigger: TGAATGCACTGGTCTCTCTCACCAGGCGCTATGGGG...CCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR GCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 2 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp ATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTGGGCTGCGAAAGAGCCCAGTaGACTCAGGGATGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: IGHDDNAVGPTDSAEPVGCERAQ*TQGCLG
Trigger: CCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCA...GCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR GCA 90 bp ATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAGGCGCTGCTTCCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 2 (lower is better)
Translates to: ISTVGCLIRARAMARRCFRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...GAAGCAGCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 2 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 2 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCAATTACCAGCACCGTaGGGCCTGCACTGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFQLPAP*GLHWPG
Trigger: ACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 2 (lower is better)
Translates to: ARSRASCTTRSDSASSALPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...CAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCGACTCTCCACATGCTaGCCCTCCTGGGGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGRLSTC*PSWGLS
Trigger: ACTGAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR-3UTR CCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGAAGGGGAGGGAGGGATTaGCCTCCCCTGCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRRGGRD*PPLPAA
Trigger: AGCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCT...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGGGCAGCCGGCAGGACTaGGGAGGGGAGGGAGGGATT +
Preference number: 2 (lower is better)
Translates to: GATVGLANLKLLGGAGRLGSRQD*GGEGGI
Trigger: AATCCCTCCCTCCCCTCCCCAGTCCTGCCGGCTGCC...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGGGAACTGGCCATTGTaGCCCCGTCCCTCCTACCCT +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFGNWPL*PRPSYP
Trigger: AGGGTAGGAGGGACGGGGCCACAATGGCCAGTTCCC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCACAGGGCAGGGCCGGTaGAAGACAGCCAGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPTGQGR*KTARQA
Trigger: AGCCTGCCTGGCTGTCTTCCACCGGCCCTGCCCTGT...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CAGCTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 2 (lower is better)
Translates to: QLAQEQGDLYIHECRTQGTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...GCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR CCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GGCTCCTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 2 (lower is better)
Translates to: GSWLMKPTTWPRSQEGSRNRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...CCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp CCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGGACAAGGAGTCCAGGATaGGGACAGGGAGGAGTTCCG +
Preference number: 2 (lower is better)
Translates to: PRSCSLGTQQPPDSGMQGTRSPG*GQGGVP
Trigger: CGGAACTCCTCCCTGTCCCCATCCTGGACTCCTTGT...CCCCTGCATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CCA 90 bp CCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGGCTACGCCCATTGCCCTaGCGATCTGCAAGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: PRSCSLGTQQPPDSGMQGLRPLP*RSARSP
Trigger: TGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAG...CCCCTGCATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CCA 90 bp CCCCAGACAGTGGGATGCAGGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACAGGAGGCAGCTGGGCTaGCACGAAGGGTTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PQTVGCRGSGPCTQRPGHRRQLG*HEGLAG
Trigger: CCCTGCCAACCCTTCGTGCCAGCCCAGCTGCCTCCT...GTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCCTGCATCCCACTGTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CAA 90 bp GGGACACGAGGTCCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTaGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCTAGCC +
Preference number: 2 (lower is better)
Translates to: GTRGPAGAPVQPRTY*CAFPGPSEASWSLA
Trigger: GGCTAGGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGGACCTCGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp ATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: MKPTTWPRSQEGSRVRRSSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...GGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GCACCGTGCGGCCTGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGGATGACTTAAACTCCTaGACGTCAGTTGTCAAGCGG +
Preference number: 2 (lower is better)
Translates to: APCGLHWPGPGPPVQPARDDLNS*TSVVKR
Trigger: CCGCTTGACAACTGACGTGCAGGAGTTTAAGTCATC...CCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PLPVAPWRRHAQSAHCPGVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...CCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 2 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAAGGGAGCCCCCAATACTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: DMRSPPVSCCPATREPPILGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...TATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCAC +
Preference number: 2 (lower is better)
Translates to: KCNGATQLLFGDAAAPRQKDPGT*TQPPDH
Trigger: GTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTT...CTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AAGACCCGGGCACCTGCACTCAGCCCCCGGACCACCTTTGCACTGTCTGGGAGGGAGGATGGCCAGGAATaGCGGTACCTGCTCCTGACA +
Preference number: 2 (lower is better)
Translates to: KTRAPALSPRTTFALSGREDGQE*RYLLLT
Trigger: TGTCAGGAGCAGGTACCGGCATTCCTGGCCATCCTC...CCTCCCAGACAGTGCAAAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCCGACTCTCCACATGCTaGCCCTCCTGGGGGCTCAGT +
Preference number: 2 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPRLSTC*PSWGLS
Trigger: ACTGAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCG...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TCAGCCCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTAGGGGAGGGAGGGATTaGCCTCCCCTGCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SAPGPPAQTGQRGWPWTFRGGRD*PPLPAA
Trigger: AGCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCT...AAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR-3UTR CCA 90 bp GATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCACCTCGAAGCCGGGGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: DLARGQRQGEVFQHLEAGGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...CCCGGCTTCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GCACTCAGCCCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 2 (lower is better)
Translates to: ALSPRTTCPNRTERLAMDHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...GTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGGCTGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GGCTCCTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGAGGAGTTCCGGGGAGTaGAAAGAGAAACGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GSWLMKPTTWPRSQEGSRRSSGE*KEKRCG
Trigger: CCCACACCGTTTCTCTTTCCACTCCCCGGAACTCCT...CCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTCCTGCACGCAAACTTaGGCCACTGCTGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFSCTQT*ATAASS
Trigger: GGAAGAGGCAGCAGTGGCTCAAGTTTGCGTGCAGGA...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCAGAACCTGCTGGGGATaGTGGCCTGTCCACAGCCGC +
Preference number: 2 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGARTCWG*WPVHSR
Trigger: GCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCT...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 2 (lower is better)
Translates to: KCNGATQLLFGDAAAPRQSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...CTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCAGGAGGGGCCTCTTCTaGCTCACACAGGGCCACAAG +
Preference number: 2 (lower is better)
Translates to: PTWSLVYLATTSTSWPRSRRGLF*LTQGHK
Trigger: CTTGTGGCCCTGTGTGAGGCAGAAGAGGCCCCTCCT...GCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR-3UTR CCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCAGAGAGCTCCAGGTaGGCATCAGCCCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLAESSR*ASAPPI
Trigger: GATGGGAGGGGCTGATGCCCACCTGGAGCTCTCTGC...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CTAGCTCTTCCAGCTGGACTAGCCAAGGGGTTTCACTGCTTCTCTAGGGGGCGGACCTGCTGGGGATGCTaGCCTGTCCACAGCCGCACC +
Preference number: 2 (lower is better)
Translates to: LALPAGLAKGFHCFSRGRTCWGC*PVHSRT
Trigger: GGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGT...CCGCCCCCTAGAGAAGCAGTGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGACACCATAGAACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 2 (lower is better)
Translates to: RGTAAPGTRRSAVPGHHRTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...TCTATGGTGTCCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR CCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACCAGCTTCGCAGCCCCTaGGAGATGACAAGCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHQLRSP*EMTSLK
Trigger: CTTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGCTG...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp TGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCAGCTTCGCAGCCCCTaGGAGATGACAAGCTTGAAG +
Preference number: 2 (lower is better)
Translates to: CTGPVQGLLYNPLGLCIQQLRSP*EMTSLK
Trigger: CTTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGCTG...CTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GCCCACGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGGACCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: AHEGHDLARGQRQGEVFQDLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGGTC...CTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp CATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTGGGCAATTACTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 2 (lower is better)
Translates to: HDDNAVGPTDSAEPVGNYSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...GTAATTGCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR CAA 90 bp CACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATaGCCCTGGCGATCTGCAAGGAGTCCAGGAAACAGGACAAGGAGT +
Preference number: 2 (lower is better)
Translates to: HAQSAHCPGPRLLRP*PWRSARSPGNRTRS
Trigger: ACTCCTTGTCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR TCA 90 bp TGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: CNGATQLLFGDAAAPRQWWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...CCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp AAGACCCGGGCACCTGCACTCAGCCCCCGGACCACCTTTGCACTGTCTGGGAGGCCAAGACCATGCAGTTaGAGGCGATGTTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: KTRAPALSPRTTFALSGRPRPCS*RRCWKA
Trigger: GGCTTTCCAACATCGCCTTCAACTGCATGGTCTTGG...CCTCCCAGACAGTGCAAAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR TCA 90 bp TACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCAGACCAAGTCTGCAGTCTaGCTCCAGCACCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: YVVPCVLGHDLYQLAQEQTKSAV*LQHPGW
Trigger: CCAGCCTGGGTGCTGGAGTCAGACTGCAGACTTGGT...CTGCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488551.5
3UTR-3UTR GCA 90 bp ACTCCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 2 (lower is better)
Translates to: TPLPVAPWRRHAQSAHCPACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...TGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR GCA 90 bp GCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTCCTAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCA +
Preference number: 2 (lower is better)
Translates to: AHCPGPRLLRPLPWRSAPKRLTS*PVLLAS
Trigger: TGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTT...AGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCA +
Preference number: 2 (lower is better)
Translates to: PLPVAPWRRHAQSAHCPGKRLTS*PVLLAS
Trigger: TGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTT...CCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCACCTCGAAGCCGGGGTCTGCTACGCCCATTaGCCTGGCGATCTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: DLARGQRQGEVFQHLEAGVCYAH*PGDLQG
Trigger: TCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...CCCGGCTTCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 2 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
3UTR-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 2 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTGACTCTGGCAGACTCTaGTGGGAGGGAGGCAGCCGG +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSDSGRL*WEGGSR
Trigger: CCGGCTGCCTCCCTCCCACCAGAGTCTGCCAGAGTC...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCGTCCTAGCAAGGGTGTaGGAAGAGCCTAGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPVLARV*EEPRFE
Trigger: TTCAAACCTAGGCTCTTCCCACACCCTTGCTAGGAC...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CTAGCTCTTCCAGCTGGACTAGCCAAGGGGTTTCACTGCTTCTCTAGGGGGCGGGCTTCTCGTGGGAACTaGCCATTGTGGCCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: LALPAGLAKGFHCFSRGRASRGN*PLWPRP
Trigger: GGGACGGGGCCACAATGGCCAGTTCCCACGAGAAGC...CCGCCCCCTAGAGAAGCAGTGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTACAGGGCAGGGCCGGTaGAAGACAGCCAGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: QFSQGPTCVPFQAPQKPATGQGR*KTARQA
Trigger: AGCCTGCCTGGCTGTCTTCCACCGGCCCTGCCCTGT...AGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTCTGCCTCTTCCAGGCTaGCCTCCCAGCAGCACCAGC +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSLPLPG*PPSSTS
Trigger: GCTGGTGCTGCTGGGAGGCCAGCCTGGAAGAGGCAG...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTCCCCAGCAGGGCTTGTaGACTTGCCAGCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSPQQGL*TCQLRP
Trigger: GGGCCTCAGCTGGCAAGTCCACAAGCCCTGCTGGGG...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 2 (lower is better)
Translates to: ETPYVVPCVLGHDLYQLATTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...GGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR CCA 90 bp ATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 2 (lower is better)
Translates to: MRSPTWDSSTRYPKVSSPGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...GGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp ACTCCCATCAGGGCTGGTGTGGCCACCATCAGCAGCAGCGTGAGGCGTGTCGACGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 2 (lower is better)
Translates to: TPIRAGVATISSSVRRVDGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...GTCGACACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCCTGATGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGACACCATAGAGGCTTACTCAGTACCATaGGGCCTAGCAGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: VGQQHQVPEGQQSLDTIEAYSVP*GLAGLP
Trigger: GGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGC...CTCTATGGTGTCCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR-3UTR TCA 90 bp TCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGCCCATTGCAGCCCAATaGCTCTGGCAGACTCTGGTG +
Preference number: 2 (lower is better)
Translates to: SQSQWVKDARHTGQGRWKPIAAQ*LWQTLV
Trigger: CACCAGAGTCTGCCAGAGTCATTGGGCTGCAATGGG...CTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp CTGGATAGGGGAAGGATCCCAGTAGGAAGTGACAGCGGCACCAACATGGGGAGGGGCCAGAACGTCTCTTaGGAGGTCTGGAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LDRGRIPVGSDSGTNMGRGQNVS*EVWRGL
Trigger: CAGACCCCTCCAGACCTCTCAAGAGACGTTCTGGCC...CCTCCCCATGTTGGTGCCGCTGTCACTTCCTACTGGGATCCTTCCCCTATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGCACAATCTCAGTGGGTaGAAGACGCCAGGCACACAG +
Preference number: 2 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWHNLSG*KTPGTQ
Trigger: CTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTG...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp GCAGCCTGCCACCTGGGTGCAGCTTCGCAGCCCCTGGGAGATGACAAGCTTGAAGTGTGCCATGTCTTCTaGTGTCCCAGGCCCATTACC +
Preference number: 2 (lower is better)
Translates to: AACHLGAASQPLGDDKLEVCHVF*CPRPIT
Trigger: GGTAATGGGCCTGGGACATCAGAAGACATGGCACAC...TTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR GCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCGGACTGTGTTCACTGTaGAGGGAGAAAGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPGLCSL*REKGGR
Trigger: CCTCCCTCCTTTCTCCCTGCACAGTGAACACAGTCC...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCAGCGCCTCCCAGAACCTaGTGGGGATGCTGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSAPPRT*WGCWPV
Trigger: GACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGC...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CAGCTTCCCAAAGCGGATGTTTTCCATGATGGTCGTCCCAAACAGGACGGGCTCGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 2 (lower is better)
Translates to: QLPKADVFHDGRPKQDGLGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...GAGCCCGTCCTGTTTGGGACGACCATCATGGAAAACATCCGCTTTGGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GGGCGGCTGTGTACACCTCTTCATCGGAAGCTTCCAGCTTCCCAAAGCGGATGTACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GRLCTPLHRKLPASQSGCTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...ACATCCGCTTTGGGAAGCTGGAAGCTTCCGATGAAGAGGTGTACACAGCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CGGATGAGCTCGGCGTATAGCCCGCCTTTCTTCAGGAGCTCTTCATGTGTCCCACAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 2 (lower is better)
Translates to: RMSSAYSPPFFRSSSCVPQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...TGGGACACATGAAGAGCTCCTGAAGAAAGGCGGGCTATACGCCGAGCTCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp CTAGCTCTTCCAGCTGGACTAGCCAAGGGGTTTCACTGCTTCTCTAGGGGGCGGTTTGAAGCTGCTGGGTaGGGCAGGGAGACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LALPAGLAKGFHCFSRGRFEAAG*GRETGQ
Trigger: CTGGCCAGTCTCCCTGCCCCACCCAGCAGCTTCAAA...CCGCCCCCTAGAGAAGCAGTGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGAGGTTGTTTGGAAGATaGGGACTGTGGGTCCCGGGG +
Preference number: 2 (lower is better)
Translates to: SQSQWVKDARHTGQGRWKRLFGR*GLWVPG
Trigger: CCCCGGGACCCACAGTCCCCATCTTCCAAACAACCT...CTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTGCTTCTCGTGGGAACTaGCCATTGTGGCCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSASRGN*PLWPRP
Trigger: GGGACGGGGCCACAATGGCCAGTTCCCACGAGAAGC...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAGGCTGATGACTGAGTaGGTGAAGCAGGAACCACCT +
Preference number: 2 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGRLMTE*VKQEPP
Trigger: AGGTGGTTCCTGCTTCACCCACTCAGTCATCAGCCT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TTACTCAGTACCATGGGGCCTAGCAGGGCTCCCCCAACCCAGCACCAGGCAGAGGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 2 (lower is better)
Translates to: LLSTMGPSRAPPTQHQAEGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...CTCTGCCTGGTGCTGGGTTGGGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR-3UTR CCA 90 bp AAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGCTACGCCCATTGCCCTaGCGATCTGCTCCTGACACT +
Preference number: 2 (lower is better)
Translates to: KCNGATQLLFGDAAAPRQLRPLP*RSAPDT
Trigger: AGTGTCAGGAGCAGATCGCCAGGGCAATGGGCGTAG...CTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCACCTCGAAGCCGGGATGTTGGAAAGCCCTTaGAACAAGGCGATGCCGCGG +
Preference number: 2 (lower is better)
Translates to: DLARGQRQGEVFQHLEAGMLESP*NKAMPR
Trigger: CCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACAT...CCCGGCTTCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCTCAGCTTGTCATCCCTaGAAGTGGCAGGCATGGGGA +
Preference number: 2 (lower is better)
Translates to: EARLELSGDQLWSSQRLSSACHP*KWQAWG
Trigger: TCCCCATGCCTGCCACTTCCAGGGATGACAAGCTGA...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
3UTR-3UTR TCA 90 bp AGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTGGAGCGAAGGGGCCAGAACGTCTCTTaGGAGGTCTGGAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: RHSASSTARLPLSTVERRGQNVS*EVWRGL
Trigger: CAGACCCCTCCAGACCTCTCAAGAGACGTTCTGGCC...CCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACGACAAGCTTGAAGGATaGCTTAAACTCCTGCACGTC +
Preference number: 2 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHDKLEG*LKLLHV
Trigger: GACGTGCAGGAGTTTAAGTCATCCTTCAAGCTTGTC...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp CCCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTGCACCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 2 (lower is better)
Translates to: PPDHLPKQDREVGHGPLHLAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...GTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCGGACTGTGTTCACTGTaGAGGGAGAAAGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAGLCSL*REKGGR
Trigger: CCTCCCTCCTTTCTCCCTGCACAGTGAACACAGTCC...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTATGCATCTGCAGCAGTaGAGGGACACGAGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGAMHLQQ*RDTRSC
Trigger: GCAGGACCTCGTGTCCCTGCACTGCTGCAGATGCAT...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTGGAGCGAAGGTACCACCTCTTCTCCTaGCCAGGGGAACAGGGCACC +
Preference number: 2 (lower is better)
Translates to: RHSASSTARLPLSTVERRYHLFS*PGEQGT
Trigger: GGTGCCCTGTTCCCCTGGGCAGGAGAAGAGGTGGTA...CCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTGGAATGTCACAGCCTaGAGCGGAAGGGAATTCGGA +
Preference number: 2 (lower is better)
Translates to: PWKWQAWGRAAHTACQGWWNVTA*SGREFG
Trigger: TCCGAATTCCCTTCCGCTGCAGGCTGTGACATTCCA...CCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR-3UTR GCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGGATGGTCCTTCCATaGATGGAATGTCACAGCCTG +
Preference number: 2 (lower is better)
Translates to: GEARLELSGDQLWSSQRLRMVLP*MECHSL
Trigger: CAGGCTGTGACATTCCATGCATGGAAGGACCATCCT...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR-3UTR CCA 90 bp GGTGTTCTTGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCGGCAGCCGGCAGGACTaGGGAGGGGAGGGAGGGATT +
Preference number: 2 (lower is better)
Translates to: GVLGVDGGWFTISVGERRGSRQD*GGEGGI
Trigger: AATCCCTCCCTCCCCTCCCCAGTCCTGCCGGCTGCC...GCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCACCTCCCAGAACCTGCTaGGGATGCTGGCCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSPPRTC*GCWPVH
Trigger: GTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGG...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TCCCATCAGGGCTGGTGTGGCCACCATCAGCAGCAGCGTGAGGCGTGTCGACAGATGAAACTCCCTACGTaGTCCCTTGTGTACTTGGCC +
Preference number: 2 (lower is better)
Translates to: SHQGWCGHHQQQREACRQMKLPT*SLVYLA
Trigger: GGCCAAGTACACAAGGGACCACGTAGGGAGTTTCAT...CTGTCGACACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCCTGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR CAA 90 bp TTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTaGGCCACGACCTCTACCAGCTGGCCCAGGAGCAGGGGGATCTGT +
Preference number: 2 (lower is better)
Translates to: FWDSVMKLPTWSLVY*ATTSTSWPRSRGIC
Trigger: ACAGATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR TCA 90 bp AGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTGGAGCGAAGGGATCCCAGTAGGAAGTaGCAGCGGCACCAACATGGG +
Preference number: 2 (lower is better)
Translates to: RHSASSTARLPLSTVERRDPSRK*QRHQHG
Trigger: CCCATGTTGGTGCCGCTGTCACTTCCTACTGGGATC...CCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp CCCAGCAGCACCAGCTGCTCCATCAATGCACTGTATCACACCCCTGAAAGAGGGGATCCCAGTAGGAAGTaGCAGCGGCACCAACATGGG +
Preference number: 2 (lower is better)
Translates to: PSSTSCSINALYHTPERGDPSRK*QRHQHG
Trigger: CCCATGTTGGTGCCGCTGTCACTTCCTACTGGGATC...CCCTCTTTCAGGGGTGTGATACAGTGCATTGATGGAGCAGCTGGTGCTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGACAAGCTTGAAGGATaGCTTAAACTCCTGCACGTC +
Preference number: 2 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDDKLEG*LKLLHV
Trigger: GACGTGCAGGAGTTTAAGTCATCCTTCAAGCTTGTC...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp GTGGTAGAAACATGGTTCCACCAGCCAAACGTGTGCACACACCATGCTGCAACTCAGCGACTCTCCACATaGTGGCCCTCCTGGGGGCTC +
Preference number: 2 (lower is better)
Translates to: VVETWFHQPNVCTHHAATQRLST*WPSWGL
Trigger: GAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCGCTG...AGTTGCAGCATGGTGTGTGCACACGTTTGGCTGGTGGAACCATGTTTCTACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 2 (lower is better)
Translates to: PLMGTGGVQSFHYKQCCRASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...ACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGTCTGTCTCTGCCCATTaGAGCCCAATGACTCTGGCA +
Preference number: 2 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLSVSAH*SPMTLA
Trigger: TGCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGA...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTATGCATCTGCAGCAGTaGAGGGACACGAGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSMHLQQ*RDTRSC
Trigger: GCAGGACCTCGTGTCCCTGCACTGCTGCAGATGCAT...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTAACTTGAGCCACTGCTaGCTCTTCCAGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSNLSHC*LFQAGL
Trigger: GAGGCCAGCCTGGAAGAGGCAGCAGTGGCTCAAGTT...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp GAAGCAGACGTTCTGAAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 2 (lower is better)
Translates to: EADVLKCNGATQLLFGDAAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...TGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTTCAGAACGTCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGGTTCACAATCTCAGTaGGTGAAAGACGCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLGSQSQ*VKDARH
Trigger: GTGCCTGGCGTCTTTCACCCACTGAGATTGTGAACC...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTTACTCGTCAGCACTGTaGGCAGGAAGCAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGAYSSAL*AGSREL
Trigger: GAGCTCTCTGCTTCCTGCCCACAGTGCTGACGAGTA...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TTGCCAGCTGAGGCCCTACTCTGGGCTGCCCTAAGGAGGGGTTTAGCTGTGAACTACTCGTCAGCACTGTaGGCAGGAAGCAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: LPAEALLWAALRRGLAVNYSSAL*AGSREL
Trigger: GAGCTCTCTGCTTCCTGCCCACAGTGCTGACGAGTA...GTTCACAGCTAAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GCCCACGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGTGGGTGCTGAGATTCTaGGACTCAGTCATGAAACTC +
Preference number: 2 (lower is better)
Translates to: AHEGHDLARGQRQGEVFQWVLRF*DSVMKL
Trigger: GAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCA...CTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp GCTTCATCCAGTATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCACAGGACAGAGAGGTTaGCCATGGACCTTTGCACTG +
Preference number: 2 (lower is better)
Translates to: ASSSISTVGCLIRARAMATGQRG*PWTFAL
Trigger: CAGTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGT...GGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGATACTGGATGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCACCCATTGCAGCCCAATaGCTCTGGCAGACTCTGGTG +
Preference number: 2 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSPIAAQ*LWQTLV
Trigger: CACCAGAGTCTGCCAGAGTCATTGGGCTGCAATGGG...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTCACAATCTCAGTGGGTaGAAGACGCCAGGCACACAG +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSHNLSG*KTPGTQ
Trigger: CTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTG...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp ATCGGAAGCTTCCAGCTTCCCAAAGCGGATGTTTTCCATGATGGTCGTCCCAAAGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 2 (lower is better)
Translates to: IGSFQLPKADVFHDGRPKVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...TTTGGGACGACCATCATGGAAAACATCCGCTTTGGGAAGCTGGAAGCTTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCAAACTTGAGCCACTGCTaGCTCTTCCAGGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSNLSHC*LFQAGL
Trigger: GAGGCCAGCCTGGAAGAGGCAGCAGTGGCTCAAGTT...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCAGCAAACTTGAGCCACTaGTGCCTCTTCCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSANLSH*CLFQAG
Trigger: GCCAGCCTGGAAGAGGCAGCAGTGGCTCAAGTTTGC...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp GAAGCAGACGTTCTGAAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGGGAACCAAGTCTaGAGTCTGACTCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: EADVLKCNGATQLLFGDAAGNQV*SLTPAP
Trigger: GGGTGCTGGAGTCAGACTGCAGACTTGGTTCCCTGC...TGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTTCAGAACGTCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CCA 90 bp CAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 2 (lower is better)
Translates to: QFSQGPTCVPFQAPQKPAPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...AGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TGCTGTCCGGCCACAAGGGAGCCCCCAATAAATAGGGTACCCAAGACCATGCAGCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 2 (lower is better)
Translates to: CCPATREPPINRVPKTMQPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...CTGCATGGTCTTGGGTACCCTATTTATTGGGGGCTCCCTTGTGGCCGGACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGTTTTTAAAAATTCCCTaGAGCTACTGTAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQFLKIP*SYCRPG
Trigger: GCCAGGCCTACAGTAGCTCCAGGGAATTTTTAAAAA...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCGTCCTAGCAAGGGTGTaGGAAGAGCCTAGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAVLARV*EEPRFE
Trigger: TTCAAACCTAGGCTCTTCCCACACCCTTGCTAGGAC...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GGTGTTCTTGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCGGCTGGCGCTTCTCGTaGGAACTGGCCATTGTGGCC +
Preference number: 2 (lower is better)
Translates to: GVLGVDGGWFTISVGERRGWRFS*ELAIVA
Trigger: GGCCACAATGGCCAGTTCCCACGAGAAGCGCCAGCC...GCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCGGTGTAGATGGAGGCTaGTTCACAATCTCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAGVDGG*FTISVG
Trigger: ACCCACTGAGATTGTGAACCAGCCTCCATCTACACC...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTGGAGCGAAGGACAGCCGCACCCTCCTaGACCGATTCTGTACTGGAT +
Preference number: 2 (lower is better)
Translates to: RHSASSTARLPLSTVERRTAAPS*TDSVLD
Trigger: ATCCAGTACAGAATCGGTCCAGGAGGGTGCGGCTGT...CCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp ATCGGAAGCTTCCAGCTTCCCAAAGCGGATGTTTTCCATGATGGTCGTCCCAAAGCAGCCCCCAGACAGTaGGATGCAGGGGTTCAGGGC +
Preference number: 2 (lower is better)
Translates to: IGSFQLPKADVFHDGRPKAAPRQ*DAGVQG
Trigger: GCCCTGAACCCCTGCATCCCACTGTCTGGGGGCTGC...TTTGGGACGACCATCATGGAAAACATCCGCTTTGGGAAGCTGGAAGCTTCCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp ATAAGCAGGTGGGTGCTGAGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGCGAGACCCCACGACATaGGGTGTGGAGCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: ISRWVLRFWDSVMKLPTWRDPTT*GVELAG
Trigger: TCCTGCCAGCTCCACACCCCATGTCGTGGGGTCTCG...CCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCACCTGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR CAA 90 bp TTACACAGGGTAAATCCAGAATGCTTGCCTGGCTGTGAAGGTGCATaGCAGGTACCACCTCTTCTCCTGCCCAGGGGAACAGGGCACCGT +
Preference number: 2 (lower is better)
Translates to: LHRVNPECLPGCEGA*QVPPLLLPRGTGHR
Trigger: ACGGTGCCCTGTTCCCCTGGGCAGGAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCTGTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 90 bp TCCTGCACGTCAGTTGTCAAGCGGCTCACCAGCTGCCCTGTCTTATaGGCGTCAAAGAAGGTGATGTCTTGTCGGAGCAGGGAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: SCTSVVKRLTSCPVL*ASKKVMSCRSRELK
Trigger: CTTCAGCTCCCTGCTCCGACAAGACATCACCTTCTTTGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTTGACAACTGACGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CAA 90 bp GTGATCAGCTCTGGTCATCCCAGAGGCTCAGCTGAGCGGGTGGTTTaGGACCAACGCAAAGCAATAAGCTATAAGGGTGGGGTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: VISSGHPRGSAERVV*DQRKAISYKGGVCG
Trigger: CCCACACACCCCACCCTTATAGCTTATTGCTTTGCGTTGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGATGACCAGAGCTGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
3UTR-3UTR TCA 90 bp CCCAGCAGCACCAGCTGCTCCATCAATGCACTGTATCACACCCCTGAAAGAGGGGGTGGGGAGGGGAGGTaGAATCTAGAAATCAGGACT +
Preference number: 2 (lower is better)
Translates to: PSSTSCSINALYHTPERGGGEGR*NLEIRT
Trigger: AGTCCTGATTTCTAGATTTCACCTCCCCTCCCCACC...CCCTCTTTCAGGGGTGTGATACAGTGCATTGATGGAGCAGCTGGTGCTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp AGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTGGAGCGAAGGACTGTATCACACCCCTaGAAGAGGGTACCACCCTTC +
Preference number: 2 (lower is better)
Translates to: RHSASSTARLPLSTVERRTVSHP*KRVPPF
Trigger: GAAGGGTGGTACCCTCTTTCAGGGGTGTGATACAGT...CCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp ATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: MKLPTWSLVYLATTSTSWSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...CCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR TCA 90 bp TGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: WDSVMKLPTWSLVYLATTWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...GGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR TCA 90 bp GGGCGGCTGTGTACACCTCTTCATCGGAAGCTTCCAGCTTCCCAAAGCGGATGTCCAAGACCATGCAGTTaGAGGCGATGTTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: GRLCTPLHRKLPASQSGCPRPCS*RRCWKA
Trigger: GGCTTTCCAACATCGCCTTCAACTGCATGGTCTTGG...ACATCCGCTTTGGGAAGCTGGAAGCTTCCGATGAAGAGGTGTACACAGCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR GCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTTCTGTCTCTGCCCATTaGAGCCCAATGACTCTGGCA +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSSVSAH*SPMTLA
Trigger: TGCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGA...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCCAGCAGCACCAGCTGCTCCATCAATGCACTGTATCACACCCCTGAAAGAGGGGCTGTGAAGGTGCATTaGAGGTACCACCTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: PSSTSCSINALYHTPERGAVKVH*RYHLFS
Trigger: GGAGAAGAGGTGGTACCTGCAATGCACCTTCACAGC...CCCTCTTTCAGGGGTGTGATACAGTGCATTGATGGAGCAGCTGGTGCTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTCTCCTGGACCTCCACTaGTTAAAGACACAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSLLDLH*LKTQPL
Trigger: CAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAG...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp GTGGTAGAAACATGGTTCCACCAGCCAAACGTGTGCACACACCATGCTGCAACTGGCCCTACTCTGGGCTaGCCTAAGGAGGGGTTTAGC +
Preference number: 2 (lower is better)
Translates to: VVETWFHQPNVCTHHAATGPTLG*PKEGFS
Trigger: GCTAAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCC...AGTTGCAGCATGGTGTGTGCACACGTTTGGCTGGTGGAACCATGTTTCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp TGGGTGCTGAGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGGCAGGGAACCAAGTCTaGAGTCTGACTCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: WVLRFWDSVMKLPTWSLVAGNQV*SLTPAP
Trigger: GGGTGCTGGAGTCAGACTGCAGACTTGGTTCCCTGC...CACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488551.5
3UTR-3UTR CCA 90 bp CAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTAGTGGAGGTGTCTCGTaGAACTCTGTCTCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: QFSQGPTCVPFQAPQKPASGGVS*NSVSAH
Trigger: ATGGGCAGAGACAGAGTTCCACGAGACACCTCCACT...AGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GGTGTTCTTGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCAGGCTCCTTCTCCCATaGAGGGAGTGGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: GVLGVDGGWFTISVGERRRLLLP*REWGHR
Trigger: CCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCT...GCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CTTGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCCAGGCAAGGTTGTTTGGAAGATaGGGACTGTGGGTCCCGGGG +
Preference number: 2 (lower is better)
Translates to: LGVDGGWFTISVGERRQARLFGR*GLWVPG
Trigger: CCCCGGGACCCACAGTCCCCATCTTCCAAACAACCT...TGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCAGTGGGTGCTGAGATTCTaGGACTCAGTCATGAAACTC +
Preference number: 2 (lower is better)
Translates to: YVVPCVLGHDLYQLAQEQWVLRF*DSVMKL
Trigger: GAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCA...CTGCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR TCA 90 bp CCACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTGCCAGTCTAGGGAAGTaGGGTCCTAGCAAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: PLMGTGGVQSFHYKQCCRASLGK*GPSKGV
Trigger: CACACCCTTGCTAGGACCTCACTTCCCTAGACTGGC...ACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AATGTTGCCGTATCATCACACAGATGTGAACTCCCAGGACTTTGGTGGGCTTTTGCGCCTCCCAGAACCTaGTGGGGATGCTGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: NVAVSSHRCELPGLWWAFAPPRT*WGCWPV
Trigger: GACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGC...AAAAGCCCACCAAAGTCCTGGGAGTTCACATCTGTGTGATGATACGGCAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTATCACTCAGGATGTCTaGCTTCCCCTTTCAAGGTGC +
Preference number: 2 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSITQDV*LPLSRC
Trigger: GCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGAT...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTATCATCAAGGAACCACCTTGGCTaGCTGCCTGGTGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: WALGVSSLSITNNVAVSSRNHLG*LPGEGG
Trigger: CCCTCCCTCACCAGGCAGCCAGCCAAGGTGGTTCCT...TGATGATACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR TCA 90 bp GAGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: EILGLSHETPYVVPCVLGSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...GCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR TCA 90 bp AGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCGTGTGCCATGTCTTCTaGTGTCCCAGGCCCATTACC +
Preference number: 2 (lower is better)
Translates to: RFWDSVMKLPTWSLVYLAVCHVF*CPRPIT
Trigger: GGTAATGGGCCTGGGACATCAGAAGACATGGCACAC...GGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488551.5
3UTR-3UTR CCA 90 bp CTTGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCCAGGCAAGTGGAGGTGTCTCGTaGAACTCTGTCTCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: LGVDGGWFTISVGERRQASGGVS*NSVSAH
Trigger: ATGGGCAGAGACAGAGTTCCACGAGACACCTCCACT...TGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TGGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTTTTTAAAAATTCCCTaGAGCTACTGTAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: WGQGLSSFPIVGSMAHDRFLKIP*SYCRPG
Trigger: GCCAGGCCTACAGTAGCTCCAGGGAATTTTTAAAAA...CCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTTGTTCTTGGTGTAGATaGAGGCTGGTTCACAATCTC +
Preference number: 2 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGACSWCR*RLVHNL
Trigger: GAGATTGTGAACCAGCCTCCATCTACACCAAGAACA...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AATGTTGCCGTATCATCACACAGATGTGAACTCCCAGGACTTTGGTGGGCTTTTTCCCACTCTCCACTGTaGAGCGAAGGCCGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: NVAVSSHRCELPGLWWAFSHSPL*SEGRGE
Trigger: CTCGCCTCGGCCTTCGCTCCACAGTGGAGAGTGGGA...AAAAGCCCACCAAAGTCCTGGGAGTTCACATCTGTGTGATGATACGGCAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp TGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCATGAAACTCCCTACGTaGTCCCTTGTGTACTTGGCC +
Preference number: 2 (lower is better)
Translates to: WDSVMKLPTWSLVYLATTMKLPT*SLVYLA
Trigger: GGCCAAGTACACAAGGGACCACGTAGGGAGTTTCAT...GGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR TCA 90 bp CGGCTGTGTACACCTCTTCATCGGAAGCTTCCAGCTTCCCAAAGCGGATGTTTTCTGAAGCAGACGTTCTaGAATGTAACGGAGCCACGC +
Preference number: 2 (lower is better)
Translates to: RLCTPLHRKLPASQSGCFLKQTF*NVTEPR
Trigger: GCGTGGCTCCGTTACATTTCAGAACGTCTGCTTCAG...AAAACATCCGCTTTGGGAAGCTGGAAGCTTCCGATGAAGAGGTGTACACAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CCA 90 bp AGAGCTGAAATAACTTGTCCGCAGGCAGCAGAACTGGGACGAGCAGGGAACCAAATGAAACTCCCTACGTaGTCCCTTGTGTACTTGGCC +
Preference number: 2 (lower is better)
Translates to: RAEITCPQAAELGRAGNQMKLPT*SLVYLA
Trigger: GGCCAAGTACACAAGGGACCACGTAGGGAGTTTCAT...TTGGTTCCCTGCTCGTCCCAGTTCTGCTGCCTGCGGACAAGTTATTTCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488551.5
3UTR CAA 90 bp GAAAGAGGGTACCACCCTTCTTTACACAGGGTAAATCCAGAATGCTaGCCTGGCTGTGAAGGTGCATTGCAGGTACCACCTCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: ERGYHPSLHRVNPEC*PGCEGALQVPPLLL
Trigger: CAGGAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCTGTGTAAAGAAGGGTGGTACCCTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp CCACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTAAATCAGGGTGGATGTaGGCCTGGGGTTTTTGGATG +
Preference number: 2 (lower is better)
Translates to: PLMGTGGVQSFHYKQCCRKSGWM*AWGFWM
Trigger: CATCCAAAAACCCCAGGCCCACATCCACCCTGATTT...ACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCATGAAACTCCCTACGTaGTCCCTTGTGTACTTGGCC +
Preference number: 2 (lower is better)
Translates to: RFWDSVMKLPTWSLVYLAMKLPT*SLVYLA
Trigger: GGCCAAGTACACAAGGGACCACGTAGGGAGTTTCAT...GGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR CAA 90 bp TTAAAGAAGCCGCCCAGAAGATATAAATCTGGTGTCAGAGGCATTTaGGGCAGCCTGAGGCTGATGACTGAGTGGGTGAAGCAGGAACCA +
Preference number: 2 (lower is better)
Translates to: LKKPPRRYKSGVRGI*GSLRLMTEWVKQEP
Trigger: TGGTTCCTGCTTCACCCACTCAGTCATCAGCCTCAGGCTGCCCAAAATGCCTCTGACACCAGATTTATATCTTCTGGGCGGCTTCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 90 bp ACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTaGCCGTATCATCACACAGATGTGAACTCCCAGGACTTTGGTGGG +
Preference number: 2 (lower is better)
Translates to: TDGHWGCPVFPLQTM*PYHHTDVNSQDFGG
Trigger: CCCACCAAAGTCCTGGGAGTTCACATCTGTGTGATGATACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp AGTGGGATATCAAATCAGGGTGGATGTGGGCCTGGGGTTTTTGGATGGCTTGTCAGGGTAAATCCAGAATaGTTGCCTGGCTGTGAAGGT +
Preference number: 2 (lower is better)
Translates to: SGISNQGGCGPGVFGWLVRVNPE*LPGCEG
Trigger: ACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCT...GACAAGCCATCCAAAAACCCCAGGCCCACATCCACCCTGATTTGATATCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 90 bp TTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTGCCATGCTTaGCAAGTATTTACTGTAGATGATCCCACTCACACTCTCAAAACA +
Preference number: 2 (lower is better)
Translates to: LQHRRTSSPEPQCHA*QVFTVDDPTHTLKT
Trigger: TGTTTTGAGAGTGTGAGTGGGATCATCTACAGTAAATACTTGCAAAGCATGGCACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AATGTTGCCGTATCATCACACAGATGTGAACTCCCAGGACTTTGGTGGGCTTTTTCTAGCTCTTCCAGCTaGACTAGCCAAGGGGTTTCA +
Preference number: 2 (lower is better)
Translates to: NVAVSSHRCELPGLWWAFSSSSS*TSQGVS
Trigger: TGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAGA...AAAAGCCCACCAAAGTCCTGGGAGTTCACATCTGTGTGATGATACGGCAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CCA 90 bp AATGTTGCCGTATCATCACACAGATGTGAACTCCCAGGACTTTGGTGGGCTTTTAAAGGGAGAATAGAGTaGAGGTGTCTCGTGGAACTC +
Preference number: 2 (lower is better)
Translates to: NVAVSSHRCELPGLWWAFKGRIE*RCLVEL
Trigger: GAGTTCCACGAGACACCTCCACTCTATTCTCCCTTT...AAAAGCCCACCAAAGTCCTGGGAGTTCACATCTGTGTGATGATACGGCAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR GCA 90 bp CCACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTATGGCACATGACAGGTaGTTGATTAATAAACACTTT +
Preference number: 2 (lower is better)
Translates to: PLMGTGGVQSFHYKQCCRMAHDR*LINKHF
Trigger: AAAGTGTTTATTAATCAAGCACCTGTCATGTGCCAT...ACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp TGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCGAGGGGAGGGAGGGATaGGCCTCCCCTGCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: WPRSQEGSRVRRSRPSSIEGREG*ASPASC
Trigger: GCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCTC...GATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR GCA 72 bp GGCGGTGGGGCCGCTGTCCTCGGGGCATCCAGGGCCTaGCTCCGGATGAGCTCGGCGTATAGCCCGCCTTTC +
Preference number: 3 (lower is better)
Translates to: GGGAAVLGASRA*LRMSSAYSPPF
Trigger: GAAAGGCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCCGAGGACAGCGGCCCCACCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 72 bp CGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTaGGCAGGTCCCGCCCATCCAGCATCACCACGCCTG +
Preference number: 3 (lower is better)
Translates to: RQPGPGARRGQG*AGPAHPASPRL
Trigger: CAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 72 bp GCCGGTGGGCAATTACCAGCACCGTGCGGCCTGCACTaGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGG +
Preference number: 3 (lower is better)
Translates to: AGGQLPAPCGLH*PGPGPPVQPAR
Trigger: CCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTGCCCACCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp CCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCAGGGGGCATCTCTGCTTaGTGCTCCGCCCTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: PGARRGQGCAGPAHPASPGGISA*CSALPG
Trigger: TCCTGGGAGGGCGGAGCACAAAGCAGAGATGCCCCC...TGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR GCA 72 bp AGCAGTCCCTGCGAAAGAGCCCAGTGCACTCAGGGATaGCTCGGGTGGCTCCTCGGCGGTCCCCAGCCCCAC +
Preference number: 3 (lower is better)
Translates to: SSPCERAQCTQG*LGWLLGGPQPH
Trigger: GTGGGGCTGGGGACCGCCGAGGAGCCACCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCAGGGACTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR GCA 72 bp CCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATA +
Preference number: 3 (lower is better)
Translates to: PLEQGDAAAQLL*PAAAGFQLCPI
Trigger: TATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp GGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCGCTCCAGCAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: GAQVPPIQHHHA*RGVVEALQQGS
Trigger: GCTTCCCTGCTGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp GCTGAGCCGGTGGGCAATTACCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGCCTCCTGTACAACCCG +
Preference number: 3 (lower is better)
Translates to: AEPVGNYQHRAA*TGPVQGLLYNP
Trigger: CGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTGCCCACCGGCTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR CCA 72 bp GCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCAGCAGGGAAGCCACGG +
Preference number: 3 (lower is better)
Translates to: AGPAHPASPRLP*GRRSAPAGKPR
Trigger: CCGTGGCTTCCCTGCTGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGAGGGGAGGGAGGGATaGGCCTCCCCTGCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFEGREG*ASPASC
Trigger: GCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCTC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR-3UTR CAA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCCGTGGGAACTGGCCATaGTGGCCCCGTCCCTCCTAC +
Preference number: 3 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPRGNWP*WPRPSY
Trigger: GTAGGAGGGACGGGGCCACAATGGCCAGTTCCCACG...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCGTTGGCCATGGACCTTaGCACTGTCTGGGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSVGHGP*HCLGGH
Trigger: GTGGCCTCCCAGACAGTGCAAAGGTCCATGGCCAAC...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR TCA 72 bp CGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGAAGCCGGGGCGGCAGG +
Preference number: 3 (lower is better)
Translates to: RGPRSCQGAASG*SLSAPRSRGGR
Trigger: CCTGCCGCCCCGGCTTCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp CAGCTCCTCTGCCCGGCAGCGGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTCCCGTTGCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: QLLCPAAAGFQL*PIALLFPLLHG
Trigger: GCCATGGAGCAACGGGAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGGCAGAGGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR CCA 72 bp CCGGTGGAAGACAGCCAGGCAGGCTGGCGCTTCTCGTaGGAACTGGCCATTGTGGCCCCGTCCCTCCTACCC +
Preference number: 3 (lower is better)
Translates to: PVEDSQAGWRFS*ELAIVAPSLLP
Trigger: GGGTAGGAGGGACGGGGCCACAATGGCCAGTTCCCACGAGAAGCGCCAGCCTGCCTGGCTGTCTTCCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp AACAGGACGGGCTCCTGGCTGATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGG +
Preference number: 3 (lower is better)
Translates to: NRTGSWLMKPTT*PRSQEGSRVRR
Trigger: CCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 72 bp GAGGCAGCTGGGCTGGCACGAAGGGTTGGCAGGGTGTaGGGGGCATCTCTGCTTTGTGCTCCGCCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: EAAGLARRVGRV*GASLLCAPPSQ
Trigger: CTGGGAGGGCGGAGCACAAAGCAGAGATGCCCCCCACACCCTGCCAACCCTTCGTGCCAGCCCAGCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CAA 90 bp ATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTGGGCCGCACAGTCCGCACATaGCCCAGGGCCTCGTCTGCT +
Preference number: 3 (lower is better)
Translates to: IGHDDNAVGPTDSAEPVGRTVRT*PRASSA
Trigger: AGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCG...GCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR TCA 72 bp CCGCTGTCCTCGGGGCATCCAGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGCCTTTCTTCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: PLSSGHPGPASG*ARRIARLSSGA
Trigger: AGCTCCTGAAGAAAGGCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCCGAGGACAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 72 bp CTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTaGCGCACCCAAGGCCAGCACGACGGCTACCCCCAG +
Preference number: 3 (lower is better)
Translates to: LAQEQGDLYIHE*RTQGQHDGYPQ
Trigger: CTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR CCA 72 bp ACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTaGGCAATTACCAGCACCGTGCGGCCTGCACTGGCC +
Preference number: 3 (lower is better)
Translates to: TMQWAPRTVLSR*AITSTVRPALA
Trigger: GGCCAGTGCAGGCCGCACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCGAGGGGAGGGAGGGATaGGCCTCCCCTGCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAEGREG*ASPASC
Trigger: GCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCTC...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp GATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCACCTCGAAGCCGGGCCACGCAGCTGCTCTTaGGGGACGCAGCAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: DLARGQRQGEVFQHLEAGPRSCS*GTQQPP
Trigger: TGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG...CCCGGCTTCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR TCA 72 bp CCATCAGGGCTGGTGTGGCCACCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGGACAGGGACACCAGGC +
Preference number: 3 (lower is better)
Translates to: PSGLVWPPSAAA*GVSTAWTGTPG
Trigger: GCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCCTGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp TCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTaGTGGGGATGCTGGCCTGTCCACAGCCGCACCCTC +
Preference number: 3 (lower is better)
Translates to: SAFPFQGAPPRT*WGCWPVHSRTL
Trigger: GAGGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp AAGGCCGAGGCGAGGTTAGGAAGACGGCGCGGCTCCTaGGGTCTAGCTCTTCCAGCTGGACTAGCCAAGGGG +
Preference number: 3 (lower is better)
Translates to: KAEARLGRRRGS*GLALPAGLAKG
Trigger: CCCCTTGGCTAGTCCAGCTGGAAGAGCTAGACCGCAGGAGCCGCGCCGTCTTCCTAACCTCGCCTCGGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp TACCCGAAGGTCAGCAGTCCCTGCGAAAGAGCCCAGTaGACTCAGGGATGCCTCGGGTGGCTCCTCGGCGGT +
Preference number: 3 (lower is better)
Translates to: YPKVSSPCERAQ*TQGCLGWLLGG
Trigger: ACCGCCGAGGAGCCACCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCAGGGACTGCTGACCTTCGGGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR GCA 72 bp GTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: VAPWRRHAQSAH*PGPRLLRPLPW
Trigger: CCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCACCTGCCCAAACAGGAC +
Preference number: 3 (lower is better)
Translates to: GVQGHVLKDPGT*TQPPDHLPKQD
Trigger: GTCCTGTTTGGGCAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR GCA 72 bp GGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGCGATCTGCAAGGAGTC +
Preference number: 3 (lower is better)
Translates to: GTHSPHIAQGLV*YAHCPGDLQGV
Trigger: GACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 72 bp GCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: ALRMSTAMRSPT*DSSTRYPKVSS
Trigger: ACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 72 bp GACAGCATGGACAGGGACACCAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCCTGGGAGATGACAAGC +
Preference number: 3 (lower is better)
Translates to: DSMDRDTRQPAT*VQLRSPWEMTS
Trigger: GCTTGTCATCTCCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 72 bp GCTCTGCCCCATAGCGCTCCTCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCCGCACATTGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: ALPHSAPLPVAP*RRHAQSAHCPG
Trigger: CCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCGCTATGGGGCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp CTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGACTCCTGCACGTCAGTaGTCAAGCGGCTCACCAGCT +
Preference number: 3 (lower is better)
Translates to: LMKPTTWPRSQEGSRVRRTPARQ*SSGSPA
Trigger: AGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGT...CCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp GGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTGGGGTCGTAGAAACTCCTGCACGTCAGTaGTCAAGCGGCTCACCAGCT +
Preference number: 3 (lower is better)
Translates to: GAQVPPIQHHHACRGVVETPARQ*SSGSPA
Trigger: AGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGT...TTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR TCA 72 bp AAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGCTaGGGCCCTACTCTGGGCTGCCCTAAGGAGGGGTTT +
Preference number: 3 (lower is better)
Translates to: KQGPSRACGLAS*GPTLGCPKEGF
Trigger: AAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp GACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTaGGAAAGAGCCCAGTGCACTCAGGGATGCCTCGGG +
Preference number: 3 (lower is better)
Translates to: DSSTRYPKVSSP*ERAQCTQGCLG
Trigger: CCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466514.5
3UTR GCA 72 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCACCTTTGCACTGTCTGG +
Preference number: 3 (lower is better)
Translates to: GVQGHVLKDPGT*TQPPDHLCTVW
Trigger: CCAGACAGTGCAAAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 72 bp TTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTaGCCTGTCCACAGCCGCACCCTCCTGGACCGATTC +
Preference number: 3 (lower is better)
Translates to: FQGAPPRTCWGC*PVHSRTLLDRF
Trigger: GAATCGGTCCAGGAGGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp TCCCAGACACGGCCATCGGCCATGACGACAATGCAGTaGGCCCCACGGACAGTGCTGAGCCGGTGGGCAATT +
Preference number: 3 (lower is better)
Translates to: SQTRPSAMTTMQ*APRTVLSRWAI
Trigger: AATTGCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTGTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR CCA 72 bp CCACAAGGCAGAGGTGGGGATGCTTACTCAGTACCATaGGGCCTAGCAGGGCTCCCCCAACCCAGCACCAGG +
Preference number: 3 (lower is better)
Translates to: PQGRGGDAYSVP*GLAGLPQPSTR
Trigger: CCTGGTGCTGGGTTGGGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGCATCCCCACCTCTGCCTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR-3UTR CAA 90 bp CCTCATCCACAGTCTCAGGGCCACAGGCGCCCATCACTCAGGATGTCTGCCTTCCGTGGGAACTGGCCATaGTGGCCCCGTCCCTCCTAC +
Preference number: 3 (lower is better)
Translates to: PHPQSQGHRRPSLRMSAFRGNWP*WPRPSY
Trigger: GTAGGAGGGACGGGGCCACAATGGCCAGTTCCCACG...GAAGGCAGACATCCTGAGTGATGGGCGCCTGTGGCCCTGAGACTGTGGATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp AGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGGTAGCTTCACGTCTGCTACGCCCATaGCCCTGGCGATCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: RASCTTRSDSASSALVASRLLRP*PWRSAP
Trigger: AGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACG...TGAAGCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGGGACAGGGGTCAGCTaGTCATCCCTGGAAGTGGCA +
Preference number: 3 (lower is better)
Translates to: GEARLELSGDQLWSSQRLGTGVS*SSLEVA
Trigger: TGCCACTTCCAGGGATGACAAGCTGACCCCTGTCCC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
3UTR-3UTR CAA 90 bp CCCCAGACAGTGGGATGCAGGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCGTCTGCTACGCCCATaGCCCTGGCGATCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: PQTVGCRGSGPCTQRPGHRLLRP*PWRSAR
Trigger: CCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACG...GTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCCTGCATCCCACTGTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CAA 90 bp TGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGTGGTCCCTTGTGTACTaGGCCACGACCTCTACCAGC +
Preference number: 3 (lower is better)
Translates to: CNGATQLLFGDAAAPRQWWSLVY*ATTSTS
Trigger: GCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCA...CCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATTCCCTACGTGGTCCCTaGTGTACTTGGCCACGACCT +
Preference number: 3 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDSLRGP*CTWPRP
Trigger: AGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGA...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp CCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCAAGCTGCCCTGTCTTATaGGCGTCAAAGAAGGTGATG +
Preference number: 3 (lower is better)
Translates to: PGARRGQGCAGPAHPASPSCPVL*ASKKVM
Trigger: CATCACCTTCTTTGACGCCAATAAGACAGGGCAGCT...TGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATACTCCTGCACGTCAGTaGTCAAGCGGCTCACCAGCT +
Preference number: 3 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDTPARQ*SSGSPA
Trigger: AGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGT...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp GCTTCATCCAGTATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCCGTCTGCTACGCCCATaGCCCTGGCGATCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: ASSSISTVGCLIRARAMARLLRP*PWRSAP
Trigger: AGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACG...GGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGATACTGGATGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp ATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAGGCGCTGCTTCGATGTTGGAAAGCCCTaGGAACAAGGCGATGCCGCG +
Preference number: 3 (lower is better)
Translates to: ISTVGCLIRARAMARRCFDVGKP*EQGDAA
Trigger: CGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACATC...GAAGCAGCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGCAGTTGAAGGCGATGTaGGAAAGCCCTTGGAACAAG +
Preference number: 3 (lower is better)
Translates to: RRGQGCAGPAHPASPRLPQLKAM*ESPWNK
Trigger: CTTGTTCCAAGGGCTTTCCAACATCGCCTTCAACTG...CGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp GCACCAACATGGGGAGGGCTGATGCATCTGCAGCAGTaGAGGGACACGAGGTCCTGCTGGGGCACCAGTTCA +
Preference number: 3 (lower is better)
Translates to: APTWGGLMHLQQ*RDTRSCWGTSS
Trigger: TGAACTGGTGCCCCAGCAGGACCTCGTGTCCCTGCACTGCTGCAGATGCATCAGCCCTCCCCATGTTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp CCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTaGCCTGGCGATCTGCAAGGAGTCCAGGAAACAGGA +
Preference number: 3 (lower is better)
Translates to: PHIAQGLVCYAH*PGDLQGVQETG
Trigger: TCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 72 bp CAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTaGAGCGAAGGCCGAGGCGAGGTTAGGAAGACGGCG +
Preference number: 3 (lower is better)
Translates to: QHQAQLGSHSPL*SEGRGEVRKTA
Trigger: CGCCGTCTTCCTAACCTCGCCTCGGCCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTGCAGGGCTTGTGGACTaGCCAGCTGAGGCCCTACTC +
Preference number: 3 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGAAGLVD*PAEALL
Trigger: GAGTAGGGCCTCAGCTGGCAAGTCCACAAGCCCTGC...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp CTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGTGGTCCCTTGTGTACTaGGCCACGACCTCTACCAGC +
Preference number: 3 (lower is better)
Translates to: LPTWSLVYLATTSTSWPRWSLVY*ATTSTS
Trigger: GCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCA...CCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR CAA 90 bp ATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTCAGGACTTGTGCTGGTGGTCCCTACGTGGTCCCTaGTGTACTTGGCCACGACCT +
Preference number: 3 (lower is better)
Translates to: MLGSDHTSGGPSQDLCWWSLRGP*CTWPRP
Trigger: AGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGA...CCACCAGCACAAGTCCTGAGAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp TGCTTACTCAGTACCATGGGGCCTAGCAGGGCTCCCCCAACCCAGCACCAGGCATCCCTACGTGGTCCCTaGTGTACTTGGCCACGACCT +
Preference number: 3 (lower is better)
Translates to: CLLSTMGPSRAPPTQHQASLRGP*CTWPRP
Trigger: AGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGA...TGCCTGGTGCTGGGTTGGGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR-3UTR CAA 90 bp CCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCTCCTCTTCCCGTTGCTAAAGAAGGTGATGTCTaGTCGGAGCAGGGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: PGSGRLPALPHSAPLPVAKEGDV*SEQGAE
Trigger: TTCAGCTCCCTGCTCCGACAAGACATCACCTTCTTT...AGCAACGGGAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGAGCTGCCCTGTCTTATaGGCGTCAAAGAAGGTGATG +
Preference number: 3 (lower is better)
Translates to: LADEADNLAPEPGGVKGASCPVL*ASKKVM
Trigger: CATCACCTTCTTTGACGCCAATAAGACAGGGCAGCT...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp TGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTaGCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: CWGTSSAKDLLV*LSRPLRSQLEP
Trigger: AGGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp GCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAGCCCCCAATAAATAGG +
Preference number: 3 (lower is better)
Translates to: ATRKDMRSPPVS*CPATREPPINR
Trigger: CCTATTTATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 72 bp TACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTaGAGCCTAGCCCCCTCATCCACAGTCTCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: YLCAFPGPSEAS*SLAPSSTVSGP
Trigger: TGGCCCTGAGACTGTGGATGAGGGGGCTAGGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp AAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTaGGGGTGCAGAAACTGCCAGAAGAGCTTCCAGTTA +
Preference number: 3 (lower is better)
Translates to: KASTTATPRTSR*GCRNCQKSFQL
Trigger: TAACTGGAAGCTCTTCTGGCAGTTTCTGCACCCCCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
3UTR CCA 72 bp CATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTaGCGATCTGCAAGGAGTCCAGGAAACAGGACAAGG +
Preference number: 3 (lower is better)
Translates to: HCPGPRLLRPLP*RSARSPGNRTR
Trigger: CCTTGTCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CAA 90 bp CCACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTGAGGGGAGGGAGGGATaGGCCTCCCCTGCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: PLMGTGGVQSFHYKQCCREGREG*ASPASC
Trigger: GCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCTC...ACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTACCCTGACCCAAGTGTaGGGCCCTGTTAGGCCTGTG +
Preference number: 3 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGATLTQV*GPVRPV
Trigger: CACAGGCCTAACAGGGCCCAACACTTGGGTCAGGGT...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp TACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACCACCTGCCCAAACAGGCCCAAGACCATGCAGTaGAAGGCGATGTTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: YSKTRAPALSPRTTCPNRPKTMQ*KAMLES
Trigger: GCTTTCCAACATCGCCTTCAACTGCATGGTCTTGGG...CCTGTTTGGGCAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
3UTR TCA 72 bp TGGTGTAGATGGAGGCTGGTTCACAATCTCAGTGGGTaGAAGACGCCAGGCACACAGGGCAGGGCCGGTGGA +
Preference number: 3 (lower is better)
Translates to: WCRWRLVHNLSG*KTPGTQGRAGG
Trigger: TCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR TCA 72 bp CAGAACTGGGACGAGCAGGGAACCAAGTCTGCAGTCTaGCTCCAGCACCCAGGCTGGCTCTACTCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: QNWDEQGTKSAV*LQHPGWLYSAS
Trigger: ACTGGCAGAGTAGAGCCAGCCTGGGTGCTGGAGTCAGACTGCAGACTTGGTTCCCTGCTCGTCCCAGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470645.5
ENST00000488551.5
3UTR TCA 72 bp GTGAAGAGGATGGCCAGGAATGCCGGTACCTGCTCCTaGCACTGGCGAGACAATTTTCGGAGGCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: VKRMARNAGTCS*HWRDNFRRPEP
Trigger: GGGCTCAGGCCTCCGAAAATTGTCTCGCCAGTGTCAGGAGCAGGTACCGGCATTCCTGGCCATCCTCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR TCA 72 bp GGCAGGGGTAGCCGTGCTGACCTGAAGCAGACGTTCTaGAATGTAACGGAGCCACGCAGCTGCTCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: GRGSRADLKQTF*NVTEPRSCSLG
Trigger: CCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTTCAGAACGTCTGCTTCAGGTCAGCACGGCTACCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR GCA 72 bp CCACCAGCCAAACGTGTGCACACACCATGCTGCAACTaGTGGGCCACCTGTCTGTCCTCCCAACAGGACACA +
Preference number: 3 (lower is better)
Translates to: PPAKRVHTPCCN*WATCLSSQQDT
Trigger: TGTGTCCTGTTGGGAGGACAGACAGGTGGCCCAGCAGTTGCAGCATGGTGTGTGCACACGTTTGGCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp AGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTaGAAGGAGTCCAGGAAACAGGACAAGGAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: RASSATPIALAI*KESRKQDKESR
Trigger: TCTGGACTCCTTGTCCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR CCA 72 bp AGAGGCATTTTGGGCAGCCTGAGGCTGATGACTGAGTaGGTGAAGCAGGAACCACCTTGGCTGGCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: RGILGSLRLMTE*VKQEPPWLAAW
Trigger: CCAGGCAGCCAGCCAAGGTGGTTCCTGCTTCACCCACTCAGTCATCAGCCTCAGGCTGCCCAAAATGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp CCAGCCAAACGTGTGCACACACCATGCTGCAACTGCTaGGCCACCTGTCTGTCCTCCCAACAGGACACAAGC +
Preference number: 3 (lower is better)
Translates to: PAKRVHTPCCNC*ATCLSSQQDTS
Trigger: GCTTGTGTCCTGTTGGGAGGACAGACAGGTGGCCCAGCAGTTGCAGCATGGTGTGTGCACACGTTTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp AAGACCATGCAGTTGAAGGCGATGTTGGAAAGCCCTTaGAACAAGGCGATGCCGCGGCCCAGCTCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: KTMQLKAMLESP*NKAMPRPSSSA
Trigger: GGCAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACATCGCCTTCAACTGCATGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTGTAGGCCTGGCCAATTaGAAGCTGCTGGGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSVGLAN*KLLGGA
Trigger: TGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTAC...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp TCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGGGGAAGAGCCTAGGTTaGAATTCCCAGGCCCACTTC +
Preference number: 3 (lower is better)
Translates to: SQSQWVKDARHTGQGRWKGKSLG*NSQAHF
Trigger: GAAGTGGGCCTGGGAATTCAAACCTAGGCTCTTCCC...CTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp GTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGTTAGGCCTGTGTCCCTaGTGGGTGGGGAGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: VDGGWFTISVGERRQAHRLGLCP*WVGRGG
Trigger: ACCTCCCCTCCCCACCCACAAGGGACACAGGCCTAA...CCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp CTAGCTCTTCCAGCTGGACTAGCCAAGGGGTTTCACTGCTTCTCTAGGGGGCGGCTCCTGCACGCAAACTaGAGCCACTGCTGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: LALPAGLAKGFHCFSRGRLLHAN*SHCCLF
Trigger: GAAGAGGCAGCAGTGGCTCAAGTTTGCGTGCAGGAG...CCGCCCCCTAGAGAAGCAGTGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp CCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGGTGGGAGATGACAAGCTaGAAGGATGACTTAAACTCC +
Preference number: 3 (lower is better)
Translates to: PRSCSLGTQQPPDSGMQGWEMTS*KDDLNS
Trigger: GGAGTTTAAGTCATCCTTCAAGCTTGTCATCTCCCA...CCCCTGCATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTGGGAAGAGCCTAGGTTaGAATTCCCAGGCCCACTTC +
Preference number: 3 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGAGKSLG*NSQAHF
Trigger: GAAGTGGGCCTGGGAATTCAAACCTAGGCTCTTCCC...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp GATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCACCTCGAAGCCGGGAAAGAAGGTGATGTCTaGTCGGAGCAGGGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: DLARGQRQGEVFQHLEAGKEGDV*SEQGAE
Trigger: TTCAGCTCCCTGCTCCGACAAGACATCACCTTCTTT...CCCGGCTTCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp AGGCGATGTTGGAAAGCCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTGCAGTTGAAGGCGATGTaGGAAAGCCCTTGGAACAAG +
Preference number: 3 (lower is better)
Translates to: RRCWKALGTRRCRGPAPLQLKAM*ESPWNK
Trigger: CTTGTTCCAAGGGCTTTCCAACATCGCCTTCAACTG...CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACATCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp AGTGGAGGTGTCTCGTGGAACTCTGTCTCTGCCCATTaGAGCCCAATGACTCTGGCAGACTCTGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SGGVSWNSVSAH*SPMTLADSGGR
Trigger: CCTCCCACCAGAGTCTGCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGAGTTCCACGAGACACCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp GCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATaGTCCTTCCATGCATGGAATGTCACAGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: AWGRAAHTACQG*SFHAWNVTACS
Trigger: GCTGCAGGCTGTGACATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR-3UTR CAA 90 bp CCCAGCAGCACCAGCTGCTCCATCAATGCACTGTATCACACCCCTGAAAGAGGGGGCTGTGAAGGTGCATaGCAGGTACCACCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: PSSTSCSINALYHTPERGGCEGA*QVPPLL
Trigger: GAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCC...CCCTCTTTCAGGGGTGTGATACAGTGCATTGATGGAGCAGCTGGTGCTGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp TGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTGGTCCCTTGTGTACTaGGCCACGACCTCTACCAGC +
Preference number: 3 (lower is better)
Translates to: WDSVMKLPTWSLVYLATTWSLVY*ATTSTS
Trigger: GCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCA...GGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR CAA 90 bp ACTCCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAAGCTGCCCTGTCTTATaGGCGTCAAAGAAGGTGATG +
Preference number: 3 (lower is better)
Translates to: TPLPVAPWRRHAQSAHCPSCPVL*ASKKVM
Trigger: CATCACCTTCTTTGACGCCAATAAGACAGGGCAGCT...TGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
3UTR-3UTR CAA 90 bp ATCGGAAGCTTCCAGCTTCCCAAAGCGGATGTTTTCCATGATGGTCGTCCCAAACGCACAGTCCGCACATaGCCCAGGGCCTCGTCTGCT +
Preference number: 3 (lower is better)
Translates to: IGSFQLPKADVFHDGRPKRTVRT*PRASSA
Trigger: AGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCG...TTTGGGACGACCATCATGGAAAACATCCGCTTTGGGAAGCTGGAAGCTTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR-3UTR CAA 90 bp ATCTCCTTCAGTGCTGGGTGTTCTTGGTGTAGATGGAGGCTGGTTCACAATCTCTTAGGCCTGTGTCCCTaGTGGGTGGGGAGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: ISFSAGCSWCRWRLVHNLLGLCP*WVGRGG
Trigger: ACCTCCCCTCCCCACCCACAAGGGACACAGGCCTAA...GAGATTGTGAACCAGCCTCCATCTACACCAAGAACACCCAGCACTGAAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp GGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATaGATGGAATGTCACAGCCTGCAGCGGAAGGGAATT +
Preference number: 3 (lower is better)
Translates to: GSSHSLSRMVLP*MECHSLQRKGI
Trigger: AATTCCCTTCCGCTGCAGGCTGTGACATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR CCA 72 bp GCTCACACAGCCTGTCAAGGATGGTCCTTCCATGCATaGAATGTCACAGCCTGCAGCGGAAGGGAATTCGGA +
Preference number: 3 (lower is better)
Translates to: AHTACQGWSFHA*NVTACSGREFG
Trigger: TCCGAATTCCCTTCCGCTGCAGGCTGTGACATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR-3UTR CAA 90 bp CCACTGATGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTCTCTGTCTCTGCCCATaGCAGCCCAATGACTCTGGC +
Preference number: 3 (lower is better)
Translates to: PLMGTGGVQSFHYKQCCRLCLCP*QPNDSG
Trigger: GCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGAG...ACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp GAGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGTACTTGGCTGGTCCCTTGTGTACTaGGCCACGACCTCTACCAGC +
Preference number: 3 (lower is better)
Translates to: EILGLSHETPYVVPCVLGWSLVY*ATTSTS
Trigger: GCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCA...GCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR-3UTR CAA 90 bp GAAGCAGACGTTCTGAAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCACCCAAGACCATGCAGTaGAAGGCGATGTTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: EADVLKCNGATQLLFGDAPKTMQ*KAMLES
Trigger: GCTTTCCAACATCGCCTTCAACTGCATGGTCTTGGG...TGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTTCAGAACGTCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR TCA 72 bp GCTTCGCAGCCCCTGGGAGATGACAAGCTTGAAGGATaGCTTAAACTCCTGCACGTCAGTTGTCAAGCGGCT +
Preference number: 3 (lower is better)
Translates to: ASQPLGDDKLEG*LKLLHVSCQAA
Trigger: AGCCGCTTGACAACTGACGTGCAGGAGTTTAAGTCATCCTTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp AGAATAGAGTGGAGGTGTCTCGTGGAACTCTGTCTCTaGCCATTGCAGCCCAATGACTCTGGCAGACTCTGG +
Preference number: 3 (lower is better)
Translates to: RIEWRCLVELCL*PLQPNDSGRLW
Trigger: CCAGAGTCTGCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGAGTTCCACGAGACACCTCCACTCTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp CCTTCAGTGCTGGGTGTTCTTGGTGTAGATGGAGGCTaGTTCACAATCTCAGTGGGTGAAAGACGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: PSVLGVLGVDGG*FTISVGERRQA
Trigger: TGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTACACCAAGAACACCCAGCACTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp CTGAGATTCTGGGACTCAGTCATGAAACTCCCTACGTaGTCCCTTGTGTACTTGGCCACGACCTCTACCAGC +
Preference number: 3 (lower is better)
Translates to: LRFWDSVMKLPT*SLVYLATTSTS
Trigger: GCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
3UTR GCA 72 bp AACTCCTGCACGTCAGTTGTCAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCAAAGAAGGTGATGTCT +
Preference number: 3 (lower is better)
Translates to: NSCTSVVKRLTS*PVLLASKKVMS
Trigger: AGACATCACCTTCTTTGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR GCA 72 bp TGGGAGATGACAAGCTTGAAGGATGACTTAAACTCCTaGACGTCAGTTGTCAAGCGGCTCACCAGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: WEMTSLKDDLNS*TSVVKRLTSCP
Trigger: AGGGCAGCTGGTGAGCCGCTTGACAACTGACGTGCAGGAGTTTAAGTCATCCTTCAAGCTTGTCATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
3UTR CCA 72 bp AGGAAGTGGGATATCAAATCAGGGTGGATGTGGGCCTaGGGTTTTTGGATGGCTTGTCCCCAAAGCACCATC +
Preference number: 3 (lower is better)
Translates to: RKWDIKSGWMWA*GFWMACPQSTI
Trigger: GATGGTGCTTTGGGGACAAGCCATCCAAAAACCCCAGGCCCACATCCACCCTGATTTGATATCCCACTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp TGGGCACTGGGGGTGTCCAGTCTTTCCATTACAAACAATGTTGCCGTATCATCACTCCTGCACGCAAACTaGAGCCACTGCTGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: WALGVSSLSITNNVAVSSLLHAN*SHCCLF
Trigger: GAAGAGGCAGCAGTGGCTCAAGTTTGCGTGCAGGAG...TGATGATACGGCAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR TCA 72 bp TTTACACAGGGTAAATCCAGAATGCTTGCCTGGCTGTaGAGGTGCATTGCAGGTACCACCTCTTCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: FTQGKSRMLAWL*RCIAGTTSSPA
Trigger: GGCAGGAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCTGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp GGGTACCACCCTTCTTTACACAGGGTAAATCCAGAATaGTTGCCTGGCTGTGAAGGTGCATTGCAGGTACCA +
Preference number: 3 (lower is better)
Translates to: GYHPSLHRVNPE*LPGCEGALQVP
Trigger: TGGTACCTGCAATGCACCTTCACAGCCAGGCAAGCATTCTGGATTTACCCTGTGTAAAGAAGGGTGGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR-3UTR CAA 90 bp AATGTTGCCGTATCATCACACAGATGTGAACTCCCAGGACTTTGGTGGGCTTTTGGCTGTGAAGGTGCATaGCAGGTACCACCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: NVAVSSHRCELPGLWWAFGCEGA*QVPPLL
Trigger: GAGAAGAGGTGGTACCTGCAATGCACCTTCACAGCC...AAAAGCCCACCAAAGTCCTGGGAGTTCACATCTGTGTGATGATACGGCAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR TCA 72 bp CACCAGCTGCTCCATCAATGCACTGTATCACACCCCTaGAAGAGGGTACCACCCTTCTTTACACAGGGTAAA +
Preference number: 3 (lower is better)
Translates to: HQLLHQCTVSHP*KRVPPFFTQGK
Trigger: TTTACCCTGTGTAAAGAAGGGTGGTACCCTCTTTCAGGGGTGTGATACAGTGCATTGATGGAGCAGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp ACAGGGTGCAACACGGAGGAAGCTGAGGACACAATGTaGAGTGACAAAACGCAGTCACAAAAGGACATAGTC +
Preference number: 3 (lower is better)
Translates to: TGCNTEEAEDTM*SDKTQSQKDIV
Trigger: GACTATGTCCTTTTGTGACTGCGTTTTGTCACTCCACATTGTGTCCTCAGCTTCCTCCGTGTTGCACCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477719.5
3UTR TCA 72 bp GCCACAGTGCCATGCTTTGCAAGTATTTACTGTAGATaGTCCCACTCACACTCTCAAAACAGGCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: ATVPCFASIYCR*SHSHSQNRHSA
Trigger: TGCTGAATGCCTGTTTTGAGAGTGTGAGTGGGATCATCTACAGTAAATACTTGCAAAGCATGGCACTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR GCA 72 bp TCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTaGTTGATTAATAAACACTTTGGAAGGACTGAGTAC +
Preference number: 3 (lower is better)
Translates to: SFPIVGSMAHDR*LINKHFGRTEY
Trigger: GTACTCAGTCCTTCCAAAGTGTTTATTAATCAAGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CCA 72 bp CATAGTTTATTTAATGACTCCCCCACTGATGGGCACTaGGGGTGTCCAGTCTTTCCATTACAAACAATGTTG +
Preference number: 3 (lower is better)
Translates to: HSLFNDSPTDGH*GCPVFPLQTML
Trigger: CAACATTGTTTGTAATGGAAAGACTGGACACCCCCAGTGCCCATCAGTGGGGGAGTCATTAAATAAACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GCACCGTGCGGCCTGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: APCGLHWPGPGPPVQPARQHRAA*TGPVQG
Trigger: GCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTG...CCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GCACCCAAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTGGGGGTGCAGAGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: APKASTTATPRTSRWGCRGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...TCTGCACCCCCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR GCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LADEADNLAPEPGGVKGAAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPGPASG*ARRIAR
Trigger: GCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCC...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LADEADNLAPEPGGVKGAGPASG*ARRIAR
Trigger: GCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCC...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GGCTCCTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: GSWLMKPTTWPRSQEGSRGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...CCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCAGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGARRGQGCAGPAHPASPAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...TGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GCTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AEEGPPHVHSHALANVGQAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...CTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PWRRHAQSAHCPGPRLLRGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...GCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466514.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCCCCCCGGACCACCTTTaGACTGTCTGGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSPPDHL*TVWEAT
Trigger: GGTGGCCTCCCAGACAGTGCAAAGGTGGTCCGGGGG...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
70% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSMKPTT*PRSQEG
Trigger: CCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGCCGTGCGGCCTGCACTaGCCCGGTCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQPCGLH*PGPGPP
Trigger: AGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGG...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLGPASG*ARRIAR
Trigger: GCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GAGCTGGGACCGCAGGTGGGCCACGGCCCGGAGGAGGGAGGAGCTGCGGTAGCCCTGTACATTCACGAGTaGCGCACCCAAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ELGPQVGHGPEEGGAAVALYIHE*RTQGQH
Trigger: GTGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAG...GGCTACCGCAGCTCCTCCCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp TGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WPRSQEGSRVRRSRPSSITEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...GATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTGGGGTCGTAGAAGCGCTCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGPAHPASPRLPWGRRSARGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...AGCGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp ACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: TTWPRSQEGSRVRRSRPSQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...GGATGGGCGGGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSQHRAA*TGPVQG
Trigger: GCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFQHRAA*TGPVQG
Trigger: GCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CACCGTGCGGCCTGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACAATTACCAGCACCGTaGGGCCTGCACTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: HRAACTGPVQGLLYNPLGQLPAP*GLHWPG
Trigger: ACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTG...TCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGGGGCATCCAGGGCCTaGCTCCGGATGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLGASRA*LRMSSA
Trigger: CGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
69% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGGGGCTCGAGGGAGGTaGGCCCAGAGCTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGGARGR*AQSWDR
Trigger: GCGGTCCCAGCTCTGGGCCCACCTCCCTCGAGCCCC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
69% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGGGGCTCGAGGGAGGTaGGCCCAGAGCTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLGARGR*AQSWDR
Trigger: GCGGTCCCAGCTCTGGGCCCACCTCCCTCGAGCCCC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp GGCTCCTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSWLMKPTTWPRSQEGSRRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...CCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCCGTGCGGCCTGCACTaGCCCGGTCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFPCGLH*PGPGPP
Trigger: AGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACCGTGCGGCCTGCACTaGCCCGGTCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPPCGLH*PGPGPP
Trigger: AGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTCCGTGCGGCCTGCACTaGCCCGGTCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SAHCPGPRLLRPLPWRSAPCGLH*PGPGPP
Trigger: AGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGG...AGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGAGGGGAGGGAGGGATTaGCCTCCCCTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRGQGCAGPAHPASPRLPRGGRD*PPLPAA
Trigger: AGCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCT...CGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466514.5
CDS-3UTR TCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFGPASG*ARRIAR
Trigger: GCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp GCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTCCTGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: AHCPGPRLLRPLPWRSAPGPASG*ARRIAR
Trigger: GCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCC...AGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp ATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: MRSPTWDSSTRYPKVSSPGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...GGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: WLMKPTTWPRSQEGSRVRGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...GCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCGATGTTGGAAAGCCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTGGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRCWKALGTRRCRGPAPLAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACATCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQRGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTGCACCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPDHLPKQDREVGHGPLHQHRAA*TGPVQG
Trigger: GCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTG...GTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGGGGCATCCAGGGCCTaGCTCCGGATGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPGASRA*LRMSSA
Trigger: CGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp ACGAGTGCCGCACCCAAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTGGGACGCAGGAGCCTCCTaGTGGCGACTGGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSAAPKASTTATPRTSRWDAGAS*WRLECH
Trigger: GTGACACTCCAGTCGCCAGCAGGAGGCTCCTGCGTC...CCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGCGGCACTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR CCA 90 bp AGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGCAGCACCCAGCCTGCCTGGGAATaGGCCACCCCGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: RALRMSTAMRSPTWDSSTQPAWE*ATPNPD
Trigger: GTCGGGATTCGGGGTGGCCCATTCCCAGGCAGGCTG...GGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GCACCGTGCGGCCTGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACAGCTGAGAATGTCTaGAAGCGGAGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: APCGLHWPGPGPPVQPARTAENV*KRRGGS
Trigger: GCTACCGCCCCTCCGCTTCCAGACATTCTCAGCTGT...CCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGAAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358849.9
CDS-3UTR CCA 90 bp GGATGCTTACTCAGTACCATGGGGCCTAGCAGGGCTCCCCCAACCCAGCACCAGAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GCLLSTMGPSRAPPTQHQSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...CTGGTGCTGGGTTGGGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCAGGTGGGCCCAGAGCTaGGACCGCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFRWAQS*DRRWAT
Trigger: CGTGGCCCACCTGCGGTCCCAGCTCTGGGCCCACCT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp CAGCTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCAGGTGGGCCCAGAGCTaGGACCGCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QLAQEQGDLYIHECRTQGRWAQS*DRRWAT
Trigger: CGTGGCCCACCTGCGGTCCCAGCTCTGGGCCCACCT...GCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTAGGTGGGCCCAGAGCTaGGACCGCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRWAQS*DRRWAT
Trigger: CGTGGCCCACCTGCGGTCCCAGCTCTGGGCCCACCT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp GCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCCAGCACGACGGCTAGGGGCTCGAGGGAGGTaGGCCCAGAGCTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: AGGSVHSRVPHPRPARRLGARGR*AQSWDR
Trigger: GCGGTCCCAGCTCTGGGCCCACCTCCCTCGAGCCCC...TAGCCGTCGTGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTTTCCTCCGCCAGACTaGCCCACGAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: RRGQGCAGPAHPASPRLPFPPPD*PTRATI
Trigger: GATCGTGGCCCTCGTGGGCCAGTCTGGCGGAGGAAA...CGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGGCTTTTTGGGCGGTaGGGCCGCTGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLWLFGR*GRCPRG
Trigger: GCCCCGAGGACAGCGGCCCCACCGCCCAAAAAGCCA...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGCAGCACCGGCCTTCTGGCTTTTTaGGCGGTGGGGCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RALRMSTAMRSPTWDSSTGLLAF*AVGPLS
Trigger: GGACAGCGGCCCCACCGCCCAAAAAGCCAGAAGGCC...GGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACCAGGGATGCCTCGGGTaGCTCCTCGGCGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LHGEGTHSPHIAQGLVCYQGCLG*LLGGPQ
Trigger: CTGGGGACCGCCGAGGAGCCACCCGAGGCATCCCTG...GTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466514.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGGCCCCACGGACAGTGCTaGGCCGGTGGGCAATTACCA +
Preference number: 4 (lower is better)
Translates to: PRSCSLGTQQPPDSGMQGPHGQC*AGGQLP
Trigger: TGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGG...CCCCTGCATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCACGGCCATCGGCCATaGCGACAATGCAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLHGHRP*RQCSGP
Trigger: GGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR GCA 90 bp GCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTCCTAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AHCPGPRLLRPLPWRSAPSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...AGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTGGGGTCGTAGAAGCGCTTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AGPAHPASPRLPWGRRSASPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...AGCGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHKDPGT*TQPPDH
Trigger: GTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTT...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGGACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRSCSLGTQQPPDSGMQGTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...CCCCTGCATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFRGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp TGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGAGGAGGGGTCAAGGGTaGGCAGGTCCCGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: CTGPVQGLLYNPLGLCIQRRGQG*AGPAHP
Trigger: TGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT...CTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLQHRAA*TGPVQG
Trigger: GCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTG...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCTCATCCACAGTCTCAGGGCCACAGGCGCCCATCACTCAGGATGTCTGCCTTCCAGCACCGTGCGGCCTaGACTGGCCCGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PHPQSQGHRRPSLRMSAFQHRAA*TGPVQG
Trigger: GCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGCTG...GAAGGCAGACATCCTGAGTGATGGGCGCCTGTGGCCCTGAGACTGTGGATGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCCAATTACCAGCACCGTaGGGCCTGCACTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPQLPAP*GLHWPG
Trigger: ACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTG...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCAGGTGGGCCCAGAGCTaGGACCGCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSRWAQS*DRRWAT
Trigger: CGTGGCCCACCTGCGGTCCCAGCTCTGGGCCCACCT...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GCACCGTGCGGCCTGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGCAGAGAGGTTGGCCATaGACCTTTGCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: APCGLHWPGPGPPVQPARQRGWP*TFALSG
Trigger: CCCAGACAGTGCAAAGGTCCATGGCCAACCTCTCTG...CCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGCAGCCCCCAGACAGTaGGATGCAGGGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPAAPRQ*DAGVQG
Trigger: GCCCTGAACCCCTGCATCCCACTGTCTGGGGGCTGC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCAGCGTGAGGCGTGTCGACAGCATGGACAGGGACACCAGGCAGCCTGCCACCATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSVRRVDSMDRDTRQPATMKPTT*PRSQEG
Trigger: CCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT...GGTGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACTGGCTTTTTGGGCGGTaGGGCCGCTGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LHGEGTHSPHIAQGLVCYWLFGR*GRCPRG
Trigger: GCCCCGAGGACAGCGGCCCCACCGCCCAAAAAGCCA...GTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACCACCTGGGCCTTCTGGCTTTTTaGGCGGTGGGGCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QGHVLKDPGTCTQPPDHLGLLAF*AVGPLS
Trigger: GGACAGCGGCCCCACCGCCCAAAAAGCCAGAAGGCC...CAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGGCCTTCTGGCTTTTTaGGCGGTGGGGCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPGLLAF*AVGPLS
Trigger: GGACAGCGGCCCCACCGCCCAAAAAGCCAGAAGGCC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGGGGAGGGAGGGATTaGCCTCCCCTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLRGGRD*PPLPAA
Trigger: AGCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCCCTCCCAGAACCTGCTaGGGATGCTGGCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPPPRTC*GCWPVH
Trigger: GTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGG...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCCCCTCAGAAGCCAGCTaGAGCCTAGCCCCCTCATCC +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPPSEAS*SLAPSS
Trigger: GGATGAGGGGGCTAGGCTCCAGCTGGCTTCTGAGGG...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 72 bp GAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTaGTGGACTTGCCAGCTGAGGCCCTACTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGSGQQAGPQQG*WTCQLRPYSGL
Trigger: CAGCCCAGAGTAGGGCCTCAGCTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGTGCCGCACCCAAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTGGGGGTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SAAPKASTTATPRTSRWGSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...CCCCCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGCGGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR TCA 90 bp CTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: LFPLLHGEGTHSPHIAQGVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp GCACCGTGCGGCCTGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGCCAAGACCATGCAGTTaGAGGCGATGTTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: APCGLHWPGPGPPVQPARPRPCS*RRCWKA
Trigger: GGCTTTCCAACATCGCCTTCAACTGCATGGTCTTGG...CCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: LMKPTTWPRSQEGSRVRRGAASG*SLSAPR
Trigger: TCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCC...CCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GCACTCAGCCCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCACGGCCATCGGCCATaGCGACAATGCAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALSPRTTCPNRTERLAMDHGHRP*RQCSGP
Trigger: GGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTG...GTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGGCTGAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCGGCCAGAACGTCTCTTaGGAGGTCTGGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPGQNVS*EVWRGL
Trigger: CAGACCCCTCCAGACCTCTCAAGAGACGTTCTGGCC...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGCTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCCTCCCCTCCTTCTGGCTaGCACGCGGCTGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: SWPRSRGICTFTSAAPKASPPSG*HAAADA
Trigger: TGCGTCTGCAGCCGCGTGTCAGCCAGAAGGAGGGGA...GGCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR GCA 90 bp GCACCCAAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTGGGGGTGCAGAACCAGCAGGTGGGGGTaGAGAAACTGCCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: APKASTTATPRTSRWGCRTSRWG*RNCQKS
Trigger: GCTCTTCTGGCAGTTTCTGCACCCCCACCTGCTGGT...TCTGCACCCCCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR GCA 90 bp GGCTCCTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GSWLMKPTTWPRSQEGSRACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...CCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GCAGCCTGCCACCTGGGTGCAGCTTCGCAGCCCCTGGGAGATGACAAGCTTGAAGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AACHLGAASQPLGDDKLEAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...TTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KWQAWGRAAHTACQGWSFAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...GAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGCGGCCCAGCTCCTCTaGCCGGCAGCGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: IPGSGRHGEGQLTQPVKDAAQLL*PAAAGF
Trigger: GAAGCCTGCCGCTGCCGGGCAGAGGAGCTGGGCCGC...ATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPLGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CAGCGTGAGGCGTGTCGACAGCATGGACAGGGACACCAGGCAGCCTGCCACCTGTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QREACRQHGQGHQAACHLSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...CAGGTGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGTTGGCCATGGACCTTTaGACTGTCTGGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: ARSRASCTTRSDSASSALLAMDL*TVWEAT
Trigger: GGTGGCCTCCCAGACAGTGCAAAGGTCCATGGCCAA...CAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGCCCCCGGACCACCTaGCCAAACAGGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLSPRTT*PNRTER
Trigger: CCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGGCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSKDPGT*TQPPDH
Trigger: GTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAGGAGGGGTCAAGGGTaGGCAGGTCCCGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGRRGQG*AGPAHP
Trigger: TGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCAGGAGGGGTCAAGGGTaGGCAGGTCCCGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFRRGQG*AGPAHP
Trigger: TGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTAGGAGGGGTCAAGGGTaGGCAGGTCCCGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRRGQG*AGPAHP
Trigger: TGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCAACCCGCTCGGACTCTaGATCCAGCGCGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPNPLGL*IQRAGS
Trigger: GCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGGGGCATCCAGGGCCTaGCTCCGGATGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLGASRA*LRMSSA
Trigger: CGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCC...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTGCACTGGGGCATCCAGGGCCTaGCTCCGGATGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PRTTCPNRTERLAMDLCTGASRA*LRMSSA
Trigger: CGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCC...AGTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCCTTCTCAGGACTTGTaGTGGTGGCTCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LADEADNLAPEPGGVKGAPSQDL*WWLLGP
Trigger: AGGCCCCAGGAGCCACCAGCACAAGTCCTGAGAAGG...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGCAGCACCCCTTCTCAGGACTTGTaGTGGTGGCTCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RALRMSTAMRSPTWDSSTPSQDL*WWLLGP
Trigger: AGGCCCCAGGAGCCACCAGCACAAGTCCTGAGAAGG...GGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCAGCGACTCTCCACATaGTGGCCCTCCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGQRLST*WPSWGL
Trigger: GAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCGCTG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCAGCGACTCTCCACATaGTGGCCCTCCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFQRLST*WPSWGL
Trigger: GAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCGCTG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp ATTCCCTGGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGGGATTGGCCTCCCCTaGCAGCTGCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: IPWSYCRPGQFEAAGWGRGIGLP*QLLGPG
Trigger: GCCGGGGCCGAGCAGCTGGCAGGGGAGGCCAATCCC...CCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCCAGGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGACCAGCCCCAGGCTCTaGTCCTGGACCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQTSPRL*SWTSTA
Trigger: AGCAGTGGAGGTCCAGGAGCAGAGCCTGGGGCTGGT...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp ATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCCACTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: MKPTTWPRSQEGSRVRRSHSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGTG...GGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR GCA 90 bp TGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCTGCGAAAGAGCCCAGTaGACTCAGGGATGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: WLMKPTTWPRSQEGSRVRCERAQ*TQGCLG
Trigger: CCCGAGGCATCCCTGAGTGCACTGGGCTCTTTCGCA...GCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466514.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCAGCCTGCCTGGGAATaGGCCACCCCGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGQPAWE*ATPNPD
Trigger: GTCGGGATTCGGGGTGGCCCATTCCCAGGCAGGCTG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCAGCCTGCCTGGGAATaGGCCACCCCGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFQPAWE*ATPNPD
Trigger: GTCGGGATTCGGGGTGGCCCATTCCCAGGCAGGCTG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCCAGCCTGCCTGGGAATaGGCCACCCCGAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLQPAWE*ATPNPD
Trigger: GTCGGGATTCGGGGTGGCCCATTCCCAGGCAGGCTG...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp AAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCAGCTGGGACCGCAGGTaGGCCACGGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KWQAWGRAAHTACQGWSFSWDRR*ATARRR
Trigger: CCTCCTCCGGGCCGTGGCCCACCTGCGGTCCCAGCT...GAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp TCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGAGGTGGGCCCAGAGCTaGGACCGCAGGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: SLEVAGMGKGSSHSLSRMRWAQS*DRRWAT
Trigger: CGTGGCCCACCTGCGGTCCCAGCTCTGGGCCCACCT...CATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCCCAGGACCAGCAGGTaGGGGTGCAGAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLPRTSR*GCRNCQ
Trigger: CTGGCAGTTTCTGCACCCCCACCTGCTGGTCCTGGG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp CCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: PWRRHAQSAHCPGPRLLRTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...GCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PWRRHAQSAHCPGPRLLRGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...GCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLMKPTTWPRSQEGSRVRHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...GCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGCAGCCCCCAGACAGTaGGATGCAGGGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPAAPRQ*DAGVQG
Trigger: GCCCTGAACCCCTGCATCCCACTGTCTGGGGGCTGC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: HALANVGQQHQVPEGQQSHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...GGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTCACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAHCPGPRLLRPLPWRSAHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...AGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACACGCAGCTGCTCTTTaGGGACGCAGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPHAAAL*GRSSPQ
Trigger: CTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFMKPTT*PRSQEG
Trigger: CCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGMKPTT*PRSQEG
Trigger: CCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SAHCPGPRLLRPLPWRSAMKPTT*PRSQEG
Trigger: CCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT...AGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAATGAAGCCGACAACCTaGCCCCGGAGCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPMKPTT*PRSQEG
Trigger: CCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCTGGCTTTTTGGGCGGTaGGGCCGCTGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPWLFGR*GRCPRG
Trigger: GCCCCGAGGACAGCGGCCCCACCGCCCAAAAAGCCA...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGGCCTTCTGGCTTTTTaGGCGGTGGGGCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPGLLAF*AVGPLS
Trigger: GGACAGCGGCCCCACCGCCCAAAAAGCCAGAAGGCC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCGACTCTCCACATGCTaGCCCTCCTGGGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPRLSTC*PSWGLS
Trigger: ACTGAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAGGGGAGGGAGGGATTaGCCTCCCCTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGRGGRD*PPLPAA
Trigger: AGCAGCTGGCAGGGGAGGCCAATCCCTCCCTCCCCT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
3UTR CAA 72 bp AGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTaGCCAGCTGAGGCCCTACTCTGGGCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: RPTSRAPAGLVD*PAEALLWAALR
Trigger: CCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 72 bp CGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATaGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RCSMAKARTVRT*PRASSATPIAL
Trigger: CAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGGTAGCTTCAGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: RASCTTRSDSASSALVASVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...TGAAGCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR TCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGGTAGCTTCCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: QGLLYNPLGLCIQRAGSFPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...GAAGCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR TCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PWRRHAQSAHCPGPRLLRPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...GCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLGAASG*SLSAPR
Trigger: TCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCTGGTGATGAACTCGTaGGCATTCGCTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLLVMNS*AFASRA
Trigger: CGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACCCCACGGACAGTGCTaGGCCGGTGGGCAATTACCA +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPPHGQC*AGGQLP
Trigger: TGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCCACGGCCATCGGCCATaGCGACAATGCAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPHGHRP*RQCSGP
Trigger: GGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTG...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGGAGGGGTCAAGGGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTCCACAGCTGACAGCTaGGAATGTCTGGAAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RRGQGCAGPAHPASPRLPSTADS*ECLEAE
Trigger: CTCCGCTTCCAGACATTCTCAGCTGTCAGCTGTGGA...CGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp CCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCTGGCCTGGGGCGCCATaGCACACACTCCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PTWSLVYLATTSTSWPRSWPGAP*HTLPLH
Trigger: GTGGAGAGGGAGTGTGTGTCATGGCGCCCCAGGCCA...GCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488551.5
CDS-3UTR TCA 90 bp AAGACCCGGGCACCTGCACTCAGCCCCCGGACCACCTTTGCACTGTCTGGGAGGACCAAGTCTGCAGTCTaGCTCCAGCACCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTRAPALSPRTTFALSGRTKSAV*LQHPGW
Trigger: CCAGCCTGGGTGCTGGAGTCAGACTGCAGACTTGGT...CCTCCCAGACAGTGCAAAGGTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp CCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCTCCTCTTCCCGTTGCTTCACCCTCATCCCACTaGGGGCTCTATGTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGSGRLPALPHSAPLPVASPSSH*GLYVGS
Trigger: GGAGCCAACATAGAGCCCTCAGTGGGATGAGGGTGA...AGCAACGGGAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGACACCATAGAGGAAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTAAPGTRRSAVPGHHRGSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...TCCTCTATGGTGTCCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482309.5
CDS-3UTR GCA 90 bp TGGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: WGQGLSSFPIVGSMAHDRSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...CCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GCTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AEEGPPHVHSHALANVGQVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...CTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KCNGATQLLFGDAAAPRQAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...CTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: HALANVGQQHQVPEGQQSRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...GGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: LFPLLHGEGTHSPHIAQGRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...GCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPAGFQL*PIALLF
Trigger: GAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp ACTCCCATCAGGGCTGGTGTGGCCACCATCAGCAGCAGCGTGAGGCGTGTCGACCTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TPIRAGVATISSSVRRVDLGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...GTCGACACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCCTGATGGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACCTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LHGEGTHSPHIAQGLVCYLGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...GTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCAGCCCCCGGACCACCTaGCCAAACAGGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: HALANVGQQHQVPEGQQSSPRTT*PNRTER
Trigger: CCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGGCT...GGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAGCCCCCGGACCACCTaGCCAAACAGGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGSPRTT*PNRTER
Trigger: CCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGGGCT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWKDPGT*TQPPDH
Trigger: GTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTT...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAAGGGAGCCCCCAATAAAAGACCCGGGCACCTaGACTCAGCCCCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: DMRSPPVSCCPATREPPIKDPGT*TQPPDH
Trigger: GTGGTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTT...TATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGARGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp TCCCAGACACGGCCATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SQTRPSAMTTMQWAPRTVQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...CACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTGTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAAGGGAGCCCCCAATAAGGAGGGGTCAAGGGTaGGCAGGTCCCGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: DMRSPPVSCCPATREPPIRRGQG*AGPAHP
Trigger: TGGATGGGCGGGACCTGCGCACCCTTGACCCCTCCT...TATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCAACCCGCTCGGACTCTaGATCCAGCGCGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFNPLGL*IQRAGS
Trigger: GCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACAATTACCAGCACCGTaGGGCCTGCACTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPQLPAP*GLHWPG
Trigger: ACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCAATTACCAGCACCGTaGGGCCTGCACTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGQLPAP*GLHWPG
Trigger: ACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCCTTCTCAGGACTTGTaGTGGTGGCTCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLPSQDL*WWLLGP
Trigger: AGGCCCCAGGAGCCACCAGCACAAGTCCTGAGAAGG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAAGGGAGCCCCCAATAGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: DMRSPPVSCCPATREPPIASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...TATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000466514.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTAGACGGCGCGGCTCCTaGGGTCTAGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRRRGS*GLALPA
Trigger: AGCTGGAAGAGCTAGACCGCAGGAGCCGCGCCGTCT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCGTGTGCACACACCATaGTGCAACTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLRVHTP*CNCWAT
Trigger: GGTGGCCCAGCAGTTGCAGCATGGTGTGTGCACACG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CAGTGCATTCAGGAGGCAGCTGGGCTGGCACGAAGGGTTGGCAGGGTGTGGGGGGGCATCTCTGCTTTGTaGTCCGCCCTCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QCIQEAAGLARRVGRVWGGISAL*SALPGL
Trigger: GAGTCCTGGGAGGGCGGAGCACAAAGCAGAGATGCC...CCCCCACACCCTGCCAACCCTTCGTGCCAGCCCAGCTGCCTCCTGAATGCACTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR GCA 90 bp AGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGGTAGCTTCACAGTGCACTCAGGGATaGCTCGGGTGGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RASCTTRSDSASSALVASQCTQG*LGWLLG
Trigger: GCCGAGGAGCCACCCGAGGCATCCCTGAGTGCACTG...TGAAGCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466514.5
CDS-3UTR CCA 90 bp ATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCAGGTCCACAGCTGAGAATGTCTaGAAGCGGAGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: MKPTTWPRSQEGSRVRRSTAENV*KRRGGS
Trigger: GCTACCGCCCCTCCGCTTCCAGACATTCTCAGCTGT...GGACCTGCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACGAGACCCCACGACATaGGGTGTGGAGCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPRDPTT*GVELAG
Trigger: TCCTGCCAGCTCCACACCCCATGTCGTGGGGTCTCG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCAGGACCAGCAGGTaGGGGTGCAGAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGPRTSR*GCRNCQ
Trigger: CTGGCAGTTTCTGCACCCCCACCTGCTGGTCCTGGG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCCACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: SWPRSRGICTFTSAAPKATTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...GGCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000488551.5
ENST00000489192.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GVQGHVLKDPGTCTQPPDMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...GTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: CTGPVQGLLYNPLGLCIQHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...CTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCTACGCCCATTGCCCTaGCGATCTGCTCCTGACACT +
Preference number: 4 (lower is better)
Translates to: LADEADNLAPEPGGVKGALRPLP*RSAPDT
Trigger: AGTGTCAGGAGCAGATCGCCAGGGCAATGGGCGTAG...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp ATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: MAKARTVRTLPRASSATPLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...GGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: GVQGHVLKDPGTCTQPPDLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...GTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTTTCCTCCGCCAGACTaGCCCACGAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFFPPPD*PTRATI
Trigger: GATCGTGGCCCTCGTGGGCCAGTCTGGCGGAGGAAA...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGTTTCCTCCGCCAGACTaGCCCACGAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGFPPPD*PTRATI
Trigger: GATCGTGGCCCTCGTGGGCCAGTCTGGCGGAGGAAA...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GCACATTGCCCAGGGCCTCGTCTGCTACGCCCATTGCCCTGGCGATCTGCTCCTTTTCCTCCGCCAGACTaGCCCACGAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: AHCPGPRLLRPLPWRSAPFPPPD*PTRATI
Trigger: GATCGTGGCCCTCGTGGGCCAGTCTGGCGGAGGAAA...AGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GCTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: AEEGPPHVHSHALANVGQAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...CTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 4 (lower is better)
Translates to: LADEADNLAPEPGGVKGANRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGACAGTGCTGAGCCGGTaGGCAATTACCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: HWPGPGPPVQPARTLHPATVLSR*AITSTV
Trigger: CACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGT...CGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTGCACTTGGCTTTTTGGGCGGTaGGGCCGCTGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PRTTCPNRTERLAMDLCTWLFGR*GRCPRG
Trigger: GCCCCGAGGACAGCGGCCCCACCGCCCAAAAAGCCA...AGTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGGGCCTTCTGGCTTTTTaGGCGGTGGGGCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWGLLAF*AVGPLS
Trigger: GGACAGCGGCCCCACCGCCCAAAAAGCCAGAAGGCC...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCGACTCTCCACATGCTaGCCCTCCTGGGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRLSTC*PSWGLS
Trigger: ACTGAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGAGACTCTGGCAGACTCTaGTGGGAGGGAGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRDSGRL*WEGGSR
Trigger: CCGGCTGCCTCCCTCCCACCAGAGTCTGCCAGAGTC...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTTGAAGCTGCTGGGTaGGGCAGGGAGACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPFEAAG*GRETGQ
Trigger: CTGGCCAGTCTCCCTGCCCCACCCAGCAGCTTCAAA...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGCAGAGAGCTCCAGGTaGGCATCAGCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFAESSR*ASAPPI
Trigger: GATGGGAGGGGCTGATGCCCACCTGGAGCTCTCTGC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACCCTCAGAAGCCAGCTaGAGCCTAGCCCCCTCATCC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPPSEAS*SLAPSS
Trigger: GGATGAGGGGGCTAGGCTCCAGCTGGCTTCTGAGGG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCACAGCGGCACCAACATaGGGAGGGCTGATGCATCTG +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPTAAPT*GGLMHL
Trigger: CAGATGCATCAGCCCTCCCCATGTTGGTGCCGCTGT...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCGATGTTGGAAAGCCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTGAGGAGGCAGCTGGGCTaGCACGAAGGGTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRCWKALGTRRCRGPAPLRRQLG*HEGLAG
Trigger: CCCTGCCAACCCTTCGTGCCAGCCCAGCTGCCTCCT...CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACATCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp CTGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LADEADNLAPEPGGVKGAWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...CGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CCTCTGCCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCTCCTCTTCCCCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: PLPGSGRLPALPHSAPLPLAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...GGGAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFPLLHGEGTHSPHIAQGPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...GCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFGAASG*SLSAPR
Trigger: TCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGGAASG*SLSAPR
Trigger: TCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp ATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAGGCGCTGCTTCCTGGTGATGAACTCGTaGGCATTCGCTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: ISTVGCLIRARAMARRCFLVMNS*AFASRA
Trigger: CGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAG...GAAGCAGCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCTGGTGATGAACTCGTaGGCATTCGCTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGLVMNS*AFASRA
Trigger: CGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCCCCCACGGACAGTGCTaGGCCGGTGGGCAATTACCA +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPPHGQC*AGGQLP
Trigger: TGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGG...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGCCCATTGCAGCCCAATaGCTCTGGCAGACTCTGGTG +
Preference number: 4 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQPIAAQ*LWQTLV
Trigger: CACCAGAGTCTGCCAGAGTCATTGGGCTGCAATGGG...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTCCTGCACGCAAACTTaGGCCACTGCTGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPSCTQT*ATAASS
Trigger: GGAAGAGGCAGCAGTGGCTCAAGTTTGCGTGCAGGA...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTGTGGACTTGCCAGCTaGGGCCCTACTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPCGLAS*GPTLGC
Trigger: GCAGCCCAGAGTAGGGCCTCAGCTGGCAAGTCCACA...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp GCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTGGGGTCGTAGAAGCGCTCTCCCTCTCCACAGCTaGCAGCTGAGAATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGPAHPASPRLPWGRRSALPLHS*QLRMSG
Trigger: TCCAGACATTCTCAGCTGTCAGCTGTGGAGAGGGAG...AGCGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp AGCAGCGTGAGGCGTGTCGACAGCATGGACAGGGACACCAGGCAGCCTGCCACCGCACCCAAGGCCAGCTaGCAGCTGAGAATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSVRRVDSMDRDTRQPATAPKAS*QLRMSG
Trigger: TCCAGACATTCTCAGCTGTCAGCTGGCCTTGGGTGC...GGTGGCAGGCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCCTCACGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp ACGAGTGCCGCACCCAAGGCCAGCACGACGGCTACCCCCAGGACCAGCAGGTGGAGTGTCACTGACAGCTaGGAATGTCTGGAAGCGGAG +
Preference number: 4 (lower is better)
Translates to: TSAAPKASTTATPRTSRWSVTDS*ECLEAE
Trigger: CTCCGCTTCCAGACATTCTCAGCTGTCAGTGACACT...CCACCTGCTGGTCCTGGGGGTAGCCGTCGTGCTGGCCTTGGGTGCGGCACTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR TCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCTCCCAGAGGCTCAGCTaGGCGGGTGGTTTTGGACCA +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLSQRLS*AGGFGP
Trigger: TGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGA...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTAGGAGGGGCCTCTTCTaGCTCACACAGGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSRRGLF*LTQGHK
Trigger: CTTGTGGCCCTGTGTGAGGCAGAAGAGGCCCCTCCT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR GCA 90 bp TCCCAGACACGGCCATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SQTRPSAMTTMQWAPRTVACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...CACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTGTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp ATCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IPGSGRHGEGQLTQPVKDSLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...ATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR GCA 90 bp GCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATGCGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: AGMGKGSSHSLSRMVLPCGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...GCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR GCA 90 bp GGGGAAGCTGGTGATGAACTCGTGAGCATTCGCTTCCCGGGCGGCTGTGTACACGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: GEAGDELVSIRFPGGCVHGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...GTGTACACAGCCGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAGCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TCCAGTATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAGGCGCGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSISTVGCLIRARAMARRVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...GCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGATACTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: EVAGMGKGSSHSLSRMVLAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...AAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp TGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: CARQRGTAAPGTRRSAVPAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...AGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFAGFQL*PIALLF
Trigger: GAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CNGATQLLFGDAAAPRQWAGFQL*PIALLF
Trigger: GAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGC...CCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPAGFQL*PIALLF
Trigger: GAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGCTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PWKWQAWGRAAHTACQGWLGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...CCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTTGGCCATGGACCTTTaGACTGTCTGGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLLAMDL*TVWEAT
Trigger: GGTGGCCTCCCAGACAGTGCAAAGGTCCATGGCCAA...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAATCAGCACCGTGGGCTaGTTGATAAGGGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPISTVG*LIRARA
Trigger: CGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CCTCTTCCCGTTGCTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGATCAGCACCGTGGGCTaGTTGATAAGGGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: PLPVAPWRRHAQSAHCPGISTVG*LIRARA
Trigger: CGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT...CCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTATCAGCACCGTGGGCTaGTTGATAAGGGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSISTVG*LIRARA
Trigger: CGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGAAACCCGCTCGGACTCTaGATCCAGCGCGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRNPLGL*IQRAGS
Trigger: GCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTT...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCCTTCTCAGGACTTGTaGTGGTGGCTCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFPSQDL*WWLLGP
Trigger: AGGCCCCAGGAGCCACCAGCACAAGTCCTGAGAAGG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCCAGCGACTCTCCACATaGTGGCCCTCCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAQRLST*WPSWGL
Trigger: GAGCCCCCAGGAGGGCCAGCATGTGGAGAGTCGCTG...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGGAGGAGGGAGGAGCTaGGGTAGCCATCAGAGTACC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGGGGRS*GSHQST
Trigger: GGTACTCTGATGGCTACCGCAGCTCCTCCCTCCTCC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGGAGGAGGGAGGAGCTaGGGTAGCCATCAGAGTACC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPGGGRS*GSHQST
Trigger: GGTACTCTGATGGCTACCGCAGCTCCTCCCTCCTCC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGCAAACTTGAGCCACTaGTGCCTCTTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPANLSH*CLFQAG
Trigger: GCCAGCCTGGAAGAGGCAGCAGTGGCTCAAGTTTGC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACGTCTGCTACGCCCATTaGCCTGGCGATCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GVQGHVLKDPGTCTQPPDVCYAH*PGDLQG
Trigger: TCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...GTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR GCA 90 bp GGAGGCCACCAGGAAGGACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACCTGTACATTCACGAGTaGCGCACCCAAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGHQEGHEVSPCQLLSGHLYIHE*RTQGQL
Trigger: CAGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAG...GTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACACAGCTGAGAATGTCTaGAAGCGGAGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: GVQGHVLKDPGTCTQPPDTAENV*KRRGGS
Trigger: GCTACCGCCCCTCCGCTTCCAGACATTCTCAGCTGT...GTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GGTCATCCCAGAGGCTCAGCTGAGCGGGTGGTTTTGGACCAACGCAAAGCAATAGGGGCTCGAGGGAGGTaGGCCCAGAGCTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: GHPRGSAERVVLDQRKAIGARGR*AQSWDR
Trigger: GCGGTCCCAGCTCTGGGCCCACCTCCCTCGAGCCCC...TATTGCTTTGCGTTGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGATGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGCTTACTCAGTACCATaGGGCCTAGCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSAYSVP*GLAGLP
Trigger: GGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCGCTTACTCAGTACCATaGGGCCTAGCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLAYSVP*GLAGLP
Trigger: GGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGC...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGCTTACTCAGTACCATaGGGCCTAGCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGAYSVP*GLAGLP
Trigger: GGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR CCA 90 bp GGATGCTTACTCAGTACCATGGGGCCTAGCAGGGCTCCCCCAACCCAGCACCAGCGAGACCCCACGACATaGGGTGTGGAGCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GCLLSTMGPSRAPPTQHQRDPTT*GVELAG
Trigger: TCCTGCCAGCTCCACACCCCATGTCGTGGGGTCTCG...CTGGTGCTGGGTTGGGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR CCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGACCCAGGACCAGCAGGTaGGGGTGCAGAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRPRTSR*GCRNCQ
Trigger: CTGGCAGTTTCTGCACCCCCACCTGCTGGTCCTGGG...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358849.9
CDS-3UTR CCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCCCCAGGACCAGCAGGTaGGGGTGCAGAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSPRTSR*GCRNCQ
Trigger: CTGGCAGTTTCTGCACCCCCACCTGCTGGTCCTGGG...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTCCAGCACCCAGGCTGGCTCTACTCTGCCAGTGTGCCATGTCTTCTGATGTCCAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LQHPGWLYSASVPCLLMSRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...GGACATCAGAAGACATGGCACACTGGCAGAGTAGAGCCAGCCTGGGTGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR CCA 90 bp ATCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IPGSGRHGEGQLTQPVKDRQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...ATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGGCTGATGAAGCCGACAACCTGGCCCCGGAGCCAGGAGGGGTCAAGGGTGCGCATGTTGGAAAGCCCTTaGAACAAGGCGATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: WLMKPTTWPRSQEGSRVRMLESP*NKAMPR
Trigger: CCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACAT...GCGCACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCTTCATCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGACCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLDLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGGTC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGGCAGCCCCCAGACAGTaGGATGCAGGGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SQSQWVKDARHTGQGRWKAAPRQ*DAGVQG
Trigger: GCCCTGAACCCCTGCATCCCACTGTCTGGGGGCTGC...CTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LHGEGTHSPHIAQGLVCYAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...GTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPTWSLVYLATTSTSWPRSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...CCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLNRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPNRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCATGACGACAATGCAGTaGGCCCCACGGACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PWRRHAQSAHCPGPRLLRMTTMQ*APRTVL
Trigger: CAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCAT...GCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp ATTCCCTGGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGTGGCTTTTTGGGCGGTaGGGCCGCTGTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: IPWSYCRPGQFEAAGWGRWLFGR*GRCPRG
Trigger: GCCCCGAGGACAGCGGCCCCACCGCCCAAAAAGCCA...CCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCCAGGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCGGCCTTCTGGCTTTTTaGGCGGTGGGGCCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAGLLAF*AVGPLS
Trigger: GGACAGCGGCCCCACCGCCCAAAAAGCCAGAAGGCC...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCTCAGGACTTGTGCTaGTGGCTCCTGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLSQDLC*WLLGPS
Trigger: AGAAGGCCCCAGGAGCCACCAGCACAAGTCCTGAGA...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TTGCCAGCTGAGGCCCTACTCTGGGCTGCCCTAAGGAGGGGTTTAGCTGTGAACGGCAGCCGGCAGGACTaGGGAGGGGAGGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: LPAEALLWAALRRGLAVNGSRQD*GGEGGI
Trigger: AATCCCTCCCTCCCCTCCCCAGTCCTGCCGGCTGCC...GTTCACAGCTAAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTGGCAGCCGGCAGGACTaGGGAGGGGAGGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGAGSRQD*GGEGGI
Trigger: AATCCCTCCCTCCCCTCCCCAGTCCTGCCGGCTGCC...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGAGGGAACTGGCCATTGTaGCCCCGTCCCTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRGNWPL*PRPSYP
Trigger: AGGGTAGGAGGGACGGGGCCACAATGGCCAGTTCCC...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGACAGGGCAGGGCCGGTaGAAGACAGCCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLTGQGR*KTARQA
Trigger: AGCCTGCCTGGCTGTCTTCCACCGGCCCTGCCCTGT...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGACAGGGCAGGGCCGGTaGAAGACAGCCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLTGQGR*KTARQA
Trigger: AGCCTGCCTGGCTGTCTTCCACCGGCCCTGCCCTGT...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCACAGCCGCACCCTCCTaGACCGATTCTGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPTAAPS*TDSVLD
Trigger: ATCCAGTACAGAATCGGTCCAGGAGGGTGCGGCTGT...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGACCTGCTGGGGATGCTaGCCTGTCCACAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLTCWGC*PVHSRT
Trigger: GGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGT...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCGACACGAGGTCCTGCTaGGGCACCAGTTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFDTRSC*GTSSAK
Trigger: CTTGGCTGAACTGGTGCCCCAGCAGGACCTCGTGTC...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGCCCCAGCAGGGCTTGTaGACTTGCCAGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLPQQGL*TCQLRP
Trigger: GGGCCTCAGCTGGCAAGTCCACAAGCCCTGCTGGGG...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGTCCCACTCTCCACTGTaGAGCGAAGGCCGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWSHSPL*SEGRGE
Trigger: CTCGCCTCGGCCTTCGCTCCACAGTGGAGAGTGGGA...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GCTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGCTACGCCCATTGCCCTaGCGATCTGCAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AEEGPPHVHSHALANVGQLRPLP*RSARSP
Trigger: TGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAG...CTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR CCA 90 bp GCCCACGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCATTCAGGAGGCAGCTaGGCTGGCACGAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AHEGHDLARGQRQGEVFQHSGGS*AGTKGW
Trigger: CCAACCCTTCGTGCCAGCCCAGCTGCCTCCTGAATG...CTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR CCA 90 bp ACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCAGGAGCGTCCCCTCCTTCTaGCTGACACGCGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TWSLVYLATTSTSWPRSRSVPSF*LTRGCR
Trigger: TCTGCAGCCGCGTGTCAGCCAGAAGGAGGGGACGCT...CCTGCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR TCA 90 bp CCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACGCAATGCACCAGCATGCTaGCGCGGTAAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PWRRHAQSAHCPGPRLLRNAPAC*RGKTGA
Trigger: GGCTCCTGTTTTACCGCGTCAGCATGCTGGTGCATT...GCGTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp GGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTGCTGTCGGAGCAGGGAGCTaGAGAGGGCCCTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: GRDCPHSPSWAQWHMTGAVGAGS*RGPSAC
Trigger: ACATGCGGAGGGCCCTCTTCAGCTCCCTGCTCCGAC...AGCACCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp TGGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: WGQGLSSFPIVGSMAHDRPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...CCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp GCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATGCCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: AGMGKGSSHSLSRMVLPCPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...GCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR TCA 90 bp GGGGAAGCTGGTGATGAACTCGTGAGCATTCGCTTCCCGGGCGGCTGTGTACACCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: GEAGDELVSIRFPGGCVHPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...GTGTACACAGCCGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CACTGGCCCGGTCCAGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: HWPGPGPPVQPARTLHPALAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...CGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGCCTGTCCACAGCCGCACCCCTGAAGCAGACGTTCTaGAATGTAACGGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: KVRLPEPAGDAGLSTAAPLKQTF*NVTEPR
Trigger: GCGTGGCTCCGTTACATTTCAGAACGTCTGCTTCAG...GGGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CCTCTGCCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCTCCTCTTCCCAGCGGATGTTTTCCATaGTGGTCGTCCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: PLPGSGRLPALPHSAPLPSGCFP*WSSQTG
Trigger: TCCTGTTTGGGACGACCATCATGGAAAACATCCGCT...GGGAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp AGGCGATGTTGGAAAGCCCTTGGAACAAGGCGATGCCGCGGCCCAGCTCCTCTGCTGGTGATGAACTCGTaGGCATTCGCTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RRCWKALGTRRCRGPAPLLVMNS*AFASRA
Trigger: CGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAG...CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACATCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GTAGATGGAGGCTGGTTCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGGGCCTGCCTCCGGATaGGCTCGGCGTATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: VDGGWFTISVGERRQAHRGPASG*ARRIAR
Trigger: GCGGGCTATACGCCGAGCTCATCCGGAGGCAGGCCC...CCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGAACCAGCCTCCATCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCATGCTTGCCTGGCTGTaGAGGTGCATTGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPMLAWL*RCIAGT
Trigger: GGTACCTGCAATGCACCTTCACAGCCAGGCAAGCAT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTTCCTGCACGCAAACTTaGGCCACTGCTGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSSCTQT*ATAASS
Trigger: GGAAGAGGCAGCAGTGGCTCAAGTTTGCGTGCAGGA...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCACCAAGTCTGCAGTCTaGCTCCAGCACCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTWSLVYLATTSTSWPRSTKSAV*LQHPGW
Trigger: CCAGCCTGGGTGCTGGAGTCAGACTGCAGACTTGGT...GCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488551.5
CDS-3UTR TCA 90 bp GGGGTTCAGGGCCATGTACTCAAAGACCCGGGCACCTGCACTCAGCCCCCGGACGCCGGTACCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: GVQGHVLKDPGTCTQPPDAGTCS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGGTACCGGC...GTCCGGGGGCTGAGTGCAGGTGCCCGGGTCTTTGAGTACATGGCCCTGAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp ATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCGCACCCAAGGCCAGCTaGCAGCTGAGAATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: MRSPTWDSSTRYPKVSSPAPKAS*QLRMSG
Trigger: TCCAGACATTCTCAGCTGTCAGCTGGCCTTGGGTGC...GGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCAGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp TGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATGCATGGAATGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: WGRAAHTACQGWSFHAWNGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...ATTCCATGCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGGGAGGAGGGAGGAGCTaGGGTAGCCATCAGAGTACT +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGGGGRS*GSHQST
Trigger: AGTACTCTGATGGCTACCGCAGCTCCTCCCTCCTCC...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000297504.10
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGACCAGCAGGTGGGGGTaGAGAAACTGCCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGTSRWG*RNCQKS
Trigger: GCTCTTCTGGCAGTTTCTGCACCCCCACCTGCTGGT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAACCAGCAGGTGGGGGTaGAGAAACTGCCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPTSRWG*RNCQKS
Trigger: GCTCTTCTGGCAGTTTCTGCACCCCCACCTGCTGGT...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACTGTACATTCACGAGTaGCGCACCCAAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPLYIHE*RTQGQH
Trigger: GTGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCCTGTACATTCACGAGTaGCGCACCCAAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLLYIHE*RTQGQH
Trigger: GTGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAG...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR GCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCTGTACATTCACGAGTaGCGCACCCAAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFLYIHE*RTQGQH
Trigger: GTGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000498578.5
CDS-3UTR GCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPKRLTS*PVLLAS
Trigger: TGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp GCTGAAGAGGGCCCTCCGCATGTCCACAGCCATGCGCTCGCCAACGTGGGACAGAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: AEEGPPHVHSHALANVGQKRLTS*PVLLAS
Trigger: TGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTT...CTGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGCGGAGGGCCCTCTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TCTGGTCATCCCAGAGGCTCAGCTGAGCGGGTGGTTTTGGACCAACGCAAAGCAAGCCTGCCACCTGGGTaGAGCTTCGCAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGHPRGSAERVVLDQRKASLPPG*SFAAPG
Trigger: CCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCT...TGCTTTGCGTTGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGATGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR GCA 90 bp ATTCCCTGGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: IPWSYCRPGQFEAAGWGRGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...CCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCCAGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp TCTGGTCATCCCAGAGGCTCAGCTGAGCGGGTGGTTTTGGACCAACGCAAAGCAGCCCAGGGCCTCGTCTaGTACGCCCATTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGHPRGSAERVVLDQRKAAQGLV*YAHCPG
Trigger: GCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGC...TGCTTTGCGTTGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGATGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp TCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: SLEVAGMGKGSSHSLSRMRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...CATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGGCCTCCTGTACAACCCGCTCGGACTCTGCATCCAGCGCGCTGGTAGCTTCAGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RASCTTRSDSASSALVASAGFQL*PIALLF
Trigger: GAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGC...TGAAGCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCGCAGGCTTCCAGCTCTaGCCCATAGCGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSAGFQL*PIALLF
Trigger: GAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGC...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGCTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLLGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCTCTCCCCCTGTCAGCTaGTGTCCGGCCACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGRHGEGQLTQPVKDGPSSPPVS*CPATRE
Trigger: CTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGA...GGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCATTGGCCATGGACCTTTaGACTGTCTGGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPLAMDL*TVWEAT
Trigger: GGTGGCCTCCCAGACAGTGCAAAGGTCCATGGCCAA...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTTTGGCCATGGACCTTTaGACTGTCTGGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSLAMDL*TVWEAT
Trigger: GGTGGCCTCCCAGACAGTGCAAAGGTCCATGGCCAA...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp CCCCGGACCACCTGCCCAAACAGGACAGAGAGGTTGGCCATGGACCTTTGCACTACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRTTCPNRTERLAMDLCTTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...AGTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGTTTGGGCAGGTGGTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGCAGCATCACCACGCCTaGCGTGGGGTCGTAGAAGCG +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLQHHHA*RGVVEA
Trigger: CGCTTCTACGACCCCACGGCAGGCGTGGTGATGCTG...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCATCAGCACCGTGGGCTaGTTGATAAGGGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPISTVG*LIRARA
Trigger: CGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp GCTTCATCCAGTATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAACCCGCTCGGACTCTaGATCCAGCGCGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASSSISTVGCLIRARAMANPLGL*IQRAGS
Trigger: GCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTT...GGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGATACTGGATGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp GGGGAAGCTGGTGATGAACTCGTGAGCATTCGCTTCCCGGGCGGCTGTGTACACAACCCGCTCGGACTCTaGATCCAGCGCGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GEAGDELVSIRFPGGCVHNPLGL*IQRAGS
Trigger: GCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTT...GTGTACACAGCCGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CCAGGCTCTGCTCCTGGACCTCCACTGCTTAAAGACACAGCCTCTGATCTGTCAGGGGCATCCAGGGCCTaGCTCCGGATGAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PGSAPGPPLLKDTASDLSGASRA*LRMSSA
Trigger: CGCCGAGCTCATCCGGAGGCAGGCCCTGGATGCCCC...TGACAGATCAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAGCAGAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp ATTCCCTGGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: IPWSYCRPGQFEAAGWGRASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...CCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCCAGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp ATTCCCTGGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGCGCCTCCCAGAACCTaGTGGGGATGCTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: IPWSYCRPGQFEAAGWGRAPPRT*WGCWPV
Trigger: GACAGGCCAGCATCCCCAGCAGGTTCTGGGAGGCGC...CCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCCAGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCAGAAGAGCTTCCAGTTAAAGCGAGACCCCACGACATGGGGTGTGGAGCTGGCTGGCTGACACGCGGCTaGAGACGCAGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PEELPVKARPHDMGCGAGWLTRG*RRRSLL
Trigger: CAGGAGGCTCCTGCGTCTGCAGCCGCGTGTCAGCCA...GCCAGCTCCACACCCCATGTCGTGGGGTCTCGCTTTAACTGGAAGCTCTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR GCA 90 bp GCCCACGAGGGCCACGATCTTGCCAGGGGGCAGCGTCAGGGTGAAGTCTTTCAGCTGTACATTCACGAGTaGCGCACCCAAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AHEGHDLARGQRQGEVFQLYIHE*RTQGQL
Trigger: CAGCTGGCCTTGGGTGCGGCACTCGTGAATGTACAG...CTGAAAGACTTCACCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGACAGCTGAGAATGTCTaGAAGCGGAGGGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGTAENV*KRRGGS
Trigger: GCTACCGCCCCTCCGCTTCCAGACATTCTCAGCTGT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGCGAGACCCCACGACATaGGGTGTGGAGCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLEVAGMGKGSSHSLSRMRDPTT*GVELAG
Trigger: TCCTGCCAGCTCCACACCCCATGTCGTGGGGTCTCG...CATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TCTGGTCATCCCAGAGGCTCAGCTGAGCGGGTGGTTTTGGACCAACGCAAAGCAAGGCAGCCTGCCACCTaGGTGCAGCTTCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGHPRGSAERVVLDQRKARQPAT*VQLRSP
Trigger: GGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGCCT...TGCTTTGCGTTGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGATGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR CCA 90 bp GCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCATGCGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGMGKGSSHSLSRMVLPCGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...GCATGGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp GACATGAGGTCTCCCCCTGTCAGCTGCTGTCCGGCCACAAGGGAGCCCCCAATACACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: DMRSPPVSCCPATREPPIHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...TATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGACCTCATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCACTACGCCCATTGCCCTaGCGATCTGCTCCTGACACT +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPLRPLP*RSAPDT
Trigger: AGTGTCAGGAGCAGATCGCCAGGGCAATGGGCGTAG...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCTACGCCCATTGCCCTaGCGATCTGCTCCTGACACT +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGLRPLP*RSAPDT
Trigger: AGTGTCAGGAGCAGATCGCCAGGGCAATGGGCGTAG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR CCA 90 bp CCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PWKWQAWGRAAHTACQGWLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...CCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR CCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCATGTTGGAAAGCCCTTaGAACAAGGCGATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPMLESP*NKAMPR
Trigger: CCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACAT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGACCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSDLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGGTC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGACCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDDLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGGTC...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCAGAGAGGTTGGCCATaGACCTTTGCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLQRGWP*TFALSG
Trigger: CCCAGACAGTGCAAAGGTCCATGGCCAACCTCTCTG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CCCGGCAGCGGCAGGCTTCCAGCTCTGCCCCATAGCGCTCCTCTTCCCGTTGCTACAGGACAGAGAGGTTaGCCATGGACCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: PGSGRLPALPHSAPLPVATGQRG*PWTFAL
Trigger: CAGTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGT...AGCAACGGGAAGAGGAGCGCTATGGGGCAGAGCTGGAAGCCTGCCGCTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TGGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGTTTCCTCCGCCAGACTaGCCCACGAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: WGQGLSSFPIVGSMAHDRFPPPD*PTRATI
Trigger: GATCGTGGCCCTCGTGGGCCAGTCTGGCGGAGGAAA...CCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: KCNGATQLLFGDAAAPRQSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...CTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CATGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 4 (lower is better)
Translates to: HALANVGQQHQVPEGQQSNRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...GGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TCCAGTATCAGCACCGTGGGCTGCTTGATAAGGGCTCGGGCGATGGCCAGGCGCAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 4 (lower is better)
Translates to: SSISTVGCLIRARAMARRNRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...GCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGATACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCAACAGGACGGGCTCCTaGCTGATGAAGCCGACAACC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFNRTGS*LMKPTT
Trigger: GGTTGTCGGCTTCATCAGCCAGGAGCCCGTCCTGTT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGGGTGCTGAGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGCCGTGCGGCCTGCACTaGCCCGGTCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WVLRFWDSVMKLPTWSLVPCGLH*PGPGPP
Trigger: AGGAGGCCCTGGACCGGGCCAGTGCAGGCCGCACGG...CACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCACAGTGCTGAGCCGGTaGGCAATTACCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFTVLSR*AITSTV
Trigger: CACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGT...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGACAGTGCTGAGCCGGTaGGCAATTACCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGTVLSR*AITSTV
Trigger: CACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGATGACGACAATGCAGTaGGCCCCACGGACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGMTTMQ*APRTVL
Trigger: CAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCAT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGATGACGACAATGCAGTaGGCCCCACGGACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: CNGATQLLFGDAAAPRQWMTTMQ*APRTVL
Trigger: CAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCAT...CCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGTCTCAGGACTTGTGCTaGTGGCTCCTGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGSQDLC*WLLGPS
Trigger: AGAAGGCCCCAGGAGCCACCAGCACAAGTCCTGAGA...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCATCTCAGGACTTGTGCTaGTGGCTCCTGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPSQDLC*WLLGPS
Trigger: AGAAGGCCCCAGGAGCCACCAGCACAAGTCCTGAGA...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp ATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTGGGCCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 4 (lower is better)
Translates to: IGHDDNAVGPTDSAEPVGPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...GCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGGGCTGGCGCTTCTCGTaGGAACTGGCCATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SQSQWVKDARHTGQGRWKGWRFS*ELAIVA
Trigger: GGCCACAATGGCCAGTTCCCACGAGAAGCGCCAGCC...CTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGGGCTGGCGCTTCTCGTaGGAACTGGCCATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLGWRFS*ELAIVA
Trigger: GGCCACAATGGCCAGTTCCCACGAGAAGCGCCAGCC...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCACAGCCGCACCCTCCTaGACCGATTCTGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPTAAPS*TDSVLD
Trigger: ATCCAGTACAGAATCGGTCCAGGAGGGTGCGGCTGT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCCCATGCTGCAACTGCTaGGCCACCTGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPPCCNC*ATCLSS
Trigger: GGAGGACAGACAGGTGGCCCAGCAGTTGCAGCATGG...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CATGACGACAATGCAGTGGGCCCCACGGACAGTGCTGAGCCGGTGGGCAATTACCTGAGGGCTCTATGTTaGCTCCCGCCCCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: HDDNAVGPTDSAEPVGNYLRALC*LPPPSR
Trigger: TCGGGATGGGGGCGGGAGCCAACATAGAGCCCTCAG...GTAATTGCCCACCGGCTCAGCACTGTCCGTGGGGCCCACTGCATTGTCGTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482309.5
CDS-3UTR CCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCCTGAGGGCTCTATGTTaGCTCCCGCCCCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGALRALC*LPPPSR
Trigger: TCGGGATGGGGGCGGGAGCCAACATAGAGCCCTCAG...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542328.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCTGGAAGTGGCAGGCATaGGGAAGGGCAGCTCACACA +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLWKWQA*GRAAHT
Trigger: TGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCA...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
3UTR CAA 72 bp GGTCCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTaGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPAGAPVQPRTY*CAFPGPSEASW
Trigger: CCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
3UTR CAA 72 bp TCCGCACATTGCCCAGGGCCTCGTCTGCTACGCCCATaGCCCTGGCGATCTGCAAGGAGTCCAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SAHCPGPRLLRP*PWRSARSPGNR
Trigger: CCTGTTTCCTGGACTCCTTGCAGATCGCCAGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGAATGCACCAGCATGCTaGCGCGGTAAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGNAPAC*RGKTGA
Trigger: GGCTCCTGTTTTACCGCGTCAGCATGCTGGTGCATT...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCTCTGGGACTCAGTCATaGAACTCCCTACGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLSGTQS*NSLRGP
Trigger: GGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGA...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR TCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR TCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCATGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTTGGCGTCAAAGAAGGTaGTGTCTTGTCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSWRQRR*CLVGAG
Trigger: CCCTGCTCCGACAAGACATCACCTTCTTTGACGCCA...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp ATCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: IPGSGRHGEGQLTQPVKDPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...ATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR TCA 90 bp TTGCCAGCTGAGGCCCTACTCTGGGCTGCCCTAAGGAGGGGTTTAGCTGTGAACCCATCAGCAGCAGCGTaGGGCGTGTCGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: LPAEALLWAALRRGLAVNPSAAA*GVSTAW
Trigger: CCATGCTGTCGACACGCCTCACGCTGCTGCTGATGG...GTTCACAGCTAAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLLAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPLAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCCCAAGACCATGCAGTTaGAGGCGATGTTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLPRPCS*RRCWKA
Trigger: GGCTTTCCAACATCGCCTTCAACTGCATGGTCTTGG...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp GTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGACACCATAGAGCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: VGQQHQVPEGQQSLDTIEPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...CTCTATGGTGTCCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482309.5
CDS-3UTR TCA 90 bp CCTCATCCACAGTCTCAGGGCCACAGGCGCCCATCACTCAGGATGTCTGCCTTCGGGGCAGCGTCAGGGTaGAGTCTTTCAGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: PHPQSQGHRRPSLRMSAFGAASG*SLSAPR
Trigger: TCGAGGTGCTGAAAGACTTCACCCTGACGCTGCCCC...GAAGGCAGACATCCTGAGTGATGGGCGCCTGTGGCCCTGAGACTGTGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp GGTGCGCAGGTCCCGCCCATCCAGCATCACCACGCCTGCCGTGGGGTCGTAGAAAGCGGATGTTTTCCATaGTGGTCGTCCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GAQVPPIQHHHACRGVVESGCFP*WSSQTG
Trigger: TCCTGTTTGGGACGACCATCATGGAAAACATCCGCT...TTCTACGACCCCACGGCAGGCGTGGTGATGCTGGATGGGCGGGACCTGCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGCTGGTGATGAACTCGTaGGCATTCGCTTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLLVMNS*AFASRA
Trigger: CGCCCGGGAAGCGAATGCTCACGAGTTCATCACCAG...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTCACGGCCATCGGCCATaGCGACAATGCAGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QFSQGPTCVPFQAPQKPAHGHRP*RQCSGP
Trigger: GGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTG...AGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGAGTACCTGACAGCTaGGAATGTCTGGAAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLRVPDS*ECLEAE
Trigger: CTCCGCTTCCAGACATTCTCAGCTGTCAGGTACTCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000498578.5
CDS-3UTR TCA 90 bp GATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGAACCTGCTGGGGATGCTGGGCCAGAACGTCTCTTaGGAGGTCTGGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: DVCLPLSRCASQNLLGMLGQNVS*EVWRGL
Trigger: CAGACCCCTCCAGACCTCTCAAGAGACGTTCTGGCC...CAGCATCCCCAGCAGGTTCTGGGAGGCGCACCTTGAAAGGGGAAGGCAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCGGTGGGGAGGGGAGGTaGAATCTAGAAATCAGGACT +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPGGEGR*NLEIRT
Trigger: AGTCCTGATTTCTAGATTTCACCTCCCCTCCCCACC...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGGACTGAGTACCATGGTTACAGCACAGGCGTACCAGCTCCCCAGAGCCACAGTCCGTCCCTCCTACCCTaGCCCAAGTGTTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RTEYHGYSTGVPAPQSHSPSLLP*PKCWAL
Trigger: CAGGGCCCAACACTTGGGTCAGGGTAGGAGGGACGG...ACTGTGGCTCTGGGGAGCTGGTACGCCTGTGCTGTAACCATGGTACTCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCTTCCACAATCTCAGTGGGTaGAAGACGCCAGGCACACAG +
Preference number: 4 (lower is better)
Translates to: SPSPNTDAWQRPHLRGPFHNLSG*KTPGTQ
Trigger: CTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTG...GAAGGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp CTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCCAGCTCCCTCTCCACAGCTaGCAGCTGAGAATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LAQEQGDLYIHECRTQGQLPLHS*QLRMSG
Trigger: TCCAGACATTCTCAGCTGTCAGCTGTGGAGAGGGAG...CTGGCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488551.5
CDS-3UTR TCA 90 bp TGCTGTCCGGCCACAAGGGAGCCCCCAATAAATAGGGTACCCAAGACCATGCAGTGGCCTGGGGCGCCATaGCACACACTCCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CCPATREPPINRVPKTMQWPGAP*HTLPLH
Trigger: GTGGAGAGGGAGTGTGTGTCATGGCGCCCCAGGCCA...CTGCATGGTCTTGGGTACCCTATTTATTGGGGGCTCCCTTGTGGCCGGACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp AACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGGATGTGTGCCATGTCTTCTaGTGTCCCAGGCCCATTACC +
Preference number: 4 (lower is better)
Translates to: NGATQLLFGDAAAPRQWDVCHVF*CPRPIT
Trigger: GGTAATGGGCCTGGGACATCAGAAGACATGGCACAC...ATCCCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp GCAGCCTGCCACCTGGGTGCAGCTTCGCAGCCCCTGGGAGATGACAAGCTTGAACCCCATAGCGCCTGGTaGGAGAGACCAGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: AACHLGAASQPLGDDKLEPHSAW*ERPVHS
Trigger: TGAATGCACTGGTCTCTCTCACCAGGCGCTATGGGG...TTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGCTGCACCCAGGTGGCAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR TCA 90 bp TCTACCAGCTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCTCACCCTCATCCCACTaGGGGCTCTATGTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: STSWPRSRGICTFTSAAPSPSSH*GLYVGS
Trigger: GGAGCCAACATAGAGCCCTCAGTGGGATGAGGGTGA...GGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAGCTGGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR TCA 90 bp AGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCTCCCAGAGGCTCAGCTaGGCGGGTGGTTTTGGACCA +
Preference number: 4 (lower is better)
Translates to: SGRHGEGQLTQPVKDGPSSQRLS*AGGFGP
Trigger: TGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGA...GGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCGACCCGAAATAAATaGACCAGCATGCTGACGCGG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGPTRNK*TSMLTR
Trigger: CCGCGTCAGCATGCTGGTGCATTTATTTCGGGTCGG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TCCCAGACACGGCCATCGGCCATGACGACAATGCAGTGGGCCCCACGGACAGTGCCGACCCGAAATAAATaGACCAGCATGCTGACGCGG +
Preference number: 4 (lower is better)
Translates to: SQTRPSAMTTMQWAPRTVPTRNK*TSMLTR
Trigger: CCGCGTCAGCATGCTGGTGCATTTATTTCGGGTCGG...CACTGTCCGTGGGGCCCACTGCATTGTCGTCATGGCCGATGGCCGTGTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TGGGTGCTGAGATTCTGGGACTCAGTCATGAAACTCCCTACGTGGTCCCTTGTGGGGGCGGTAGCAGCCTaGCTGGGAATGGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: WVLRFWDSVMKLPTWSLVGAVAA*LGMGHP
Trigger: GGGGTGGCCCATTCCCAGGCAGGCTGCTACCGCCCC...CACAAGGGACCACGTAGGGAGTTTCATGACTGAGTCCCAGAATCTCAGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000466514.5
ENST00000482309.5
ENST00000488551.5
ENST00000489192.5
CDS-3UTR GCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGAGGAGGGGCCTCTTCTaGCTCACACAGGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLRRGLF*LTQGHK
Trigger: CTTGTGGCCCTGTGTGAGGCAGAAGAGGCCCCTCCT...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358849.9
CDS-3UTR GCA 90 bp TCTTCTCCTGCCCAGGGGAACAGGGCACCGTGTAGTCCCACAGCCTGGATGTGGACCAGCAGGTGGGGGTaGAGAAACTGCCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSPAQGNRAPCSPTAWMWTSRWG*RNCQKS
Trigger: GCTCTTCTGGCAGTTTCTGCACCCCCACCTGCTGGT...CCACATCCAGGCTGTGGGACTACACGGTGCCCTGTTCCCCTGGGCAGGAGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358849.9
CDS-3UTR GCA 90 bp GCAGAACTGGGACGAGCAGGGAACCAAGTCTGCAGTCTGACTCCAGCACCCAGGGCATGTCCACAGCCATaGGCTCGCCAACGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AELGRAGNQVCSLTPAPRACPQP*ARQRGT
Trigger: TGTCCCACGTTGGCGAGCGCATGGCTGTGGACATGC...CCTGGGTGCTGGAGTCAGACTGCAGACTTGGTTCCCTGCTCGTCCCAGTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR GCA 90 bp CAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCAAAGCGGCTCACCAGCTaGCCTGTCTTATTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QLLGPGFIVSRSSRSDSPKRLTS*PVLLAS
Trigger: TGACGCCAATAAGACAGGGCAGCTGGTGAGCCGCTT...TGGAGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR GCA 90 bp TCTGGTCATCCCAGAGGCTCAGCTGAGCGGGTGGTTTTGGACCAACGCAAAGCAGGACACCAGGCAGCCTaGCACCTGGGTGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: SGHPRGSAERVVLDQRKAGHQAA*HLGAAS
Trigger: CGAAGCTGCACCCAGGTGGCAGGCTGCCTGGTGTCC...TGCTTTGCGTTGGTCCAAAACCACCCGCTCAGCTGAGCCTCTGGGATGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR GCA 90 bp TCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCTGCTACGCCCATTaGCCTGGCGATCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLEVAGMGKGSSHSLSRMVCYAH*PGDLLL
Trigger: CAGGAGCAGATCGCCAGGGCAATGGGCGTAGCAGAC...CATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp TCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGCACAGTCCGCACATTaGCCAGGGCCTCGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: SLEVAGMGKGSSHSLSRMAQSAH*PGPRLL
Trigger: TAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGC...CATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp AAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCGCTCCTCTTCCCGTTaGTCCATGGCGAAGGCACGC +
Preference number: 4 (lower is better)
Translates to: KWQAWGRAAHTACQGWSFRSSSR*SMAKAR
Trigger: GCGTGCCTTCGCCATGGAGCAACGGGAAGAGGAGCG...GAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATCTTGGAACAAGGCGATaGCGCGGCCCAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: IPGSGRHGEGQLTQPVKDLGTRR*RGPAPL
Trigger: CAGAGGAGCTGGGCCGCGGCATCGCCTTGTTCCAAG...ATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR GCA 90 bp ACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCAGGTTGGCCATGGACCTTTaGACTGTCTGGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TWSLVYLATTSTSWPRSRLAMDL*TVWEAT
Trigger: GGTGGCCTCCCAGACAGTGCAAAGGTCCATGGCCAA...CCTGCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CTAGCTCTTCCAGCTGGACTAGCCAAGGGGTTTCACTGCTTCTCTAGGGGGCGGACGGAGCCACGCAGCTaGTCTTTGGGGACGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LALPAGLAKGFHCFSRGRTEPRS*SLGTQQ
Trigger: CTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGT...CCGCCCCCTAGAGAAGCAGTGAAACCCCTTGGCTAGTCCAGCTGGAAGAGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp ATAACTTGTCCGCAGGCAGCAGAACTGGGACGAGCAGGGAACCAAGTCTGCAGTCGAGGGCCACGATCTTaGCAGGGGGCAGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ITCPQAAELGRAGNQVCSRGPRS*QGAASG
Trigger: CCCTGACGCTGCCCCCTGGCAAGATCGTGGCCCTCG...ACTGCAGACTTGGTTCCCTGCTCGTCCCAGTTCTGCTGCCTGCGGACAAGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470645.5
CDS-3UTR GCA 90 bp AAATGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGATCAGCACCGTGGGCTaGTTGATAAGGGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: KCNGATQLLFGDAAAPRQISTVG*LIRARA
Trigger: CGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT...CTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp TCACAATCTCAGTGGGTGAAAGACGCCAGGCACACAGGGCAGGGCCGGTGGAAGATCAGCACCGTGGGCTaGTTGATAAGGGCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: SQSQWVKDARHTGQGRWKISTVG*LIRARA
Trigger: CGCCCGAGCCCTTATCAAGCAGCCCACGGTGCTGAT...CTTCCACCGGCCCTGCCCTGTGTGCCTGGCGTCTTTCACCCACTGAGATTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGGATAGGGGAAGGATCCCAGTAGGAAGTGACAGCGGCACCAACATGGGGAGGAACCCGCTCGGACTCTaGATCCAGCGCGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LDRGRIPVGSDSGTNMGRNPLGL*IQRAGS
Trigger: GCTACCAGCGCGCTGGATGCAGAGTCCGAGCGGGTT...CCTCCCCATGTTGGTGCCGCTGTCACTTCCTACTGGGATCCTTCCCCTATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CTCGTGAGCATTCGCTTCCCGGGCGGCTGTGTACACCTCTTCATCGGAAGCTTCCAATTACCAGCACCGTaGGGCCTGCACTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LVSIRFPGGCVHLFIGSFQLPAP*GLHWPG
Trigger: ACCGGGCCAGTGCAGGCCGCACGGTGCTGGTAATTG...GAAGCTTCCGATGAAGAGGTGTACACAGCCGCCCGGGAAGCGAATGCTCACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR GCA 90 bp CAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGCCTCCCCTGCCAGCTaGTCGGCCCCGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: QFSQGPTCVPFQAPQKPAASPAS*SAPALL
Trigger: CAATAAAGCCGGGGCCGAGCAGCTGGCAGGGGAGGC...AGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGTCTGTCTCTGCCCATTaGAGCCCAATGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQSVSAH*SPMTLA
Trigger: TGCCAGAGTCATTGGGCTGCAATGGGCAGAGACAGA...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CCTGCTGGGGCACCAGTTCAGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCAACTTGAGCCACTGCTaGCTCTTCCAGGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAGAPVQPRTYLCAFPGPNLSHC*LFQAGL
Trigger: GAGGCCAGCCTGGAAGAGGCAGCAGTGGCTCAAGTT...GGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCTGAACTGGTGCCCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCCTCCTGGACCTCCACTaGTTAAAGACACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPLLDLH*LKTQPL
Trigger: CAGAGGCTGTGTCTTTAAGCAGTGGAGGTCCAGGAG...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR GCA 90 bp TGGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGCGTGTGCACACACCATaGTGCAACTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: WGQGLSSFPIVGSMAHDRRVHTP*CNCWAT
Trigger: GGTGGCCCAGCAGTTGCAGCATGGTGTGTGCACACG...CCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGACACCATAGAGCTTACTCAGTACCATaGGGCCTAGCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGTAAPGTRRSAVPGHHRAYSVP*GLAGLP
Trigger: GGGGAGCCCTGCTAGGCCCCATGGTACTGAGTAAGC...TCTATGGTGTCCAGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489192.5
CDS-3UTR CCA 90 bp GAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTACGACCTCTACCAGCTaGCCCAGGAGCAGGGGGATC +
Preference number: 4 (lower is better)
Translates to: EVAGMGKGSSHSLSRMVLTTSTS*PRSRGI
Trigger: GATCCCCCTGCTCCTGGGCCAGCTGGTAGAGGTCGT...AAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCGCTCGCCAACGTGGGACAGCAGCACCAGGTACCCGAAGGTCAGCAGTCCCTGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: CARQRGTAAPGTRRSAVPGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...AGGGACTGCTGACCTTCGGGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CTGGCCCAGGAGCAGGGGGATCTGTACATTCACGAGTGCCGCACCCAAGGCCAGGGTCCCTTGTGTACTTaGCCACGACCTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: LAQEQGDLYIHECRTQGQGPLCT*PRPLPA
Trigger: AGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACC...CTGGCCTTGGGTGCGGCACTCGTGAATGTACAGATCCCCCTGCTCCTGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488551.5
ENST00000489192.5
CDS-3UTR CCA 90 bp TCCCTGGAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGATGCGCTCGCCAACGTaGGACAGCAGCACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SLEVAGMGKGSSHSLSRMMRSPT*DSSTRY
Trigger: GTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCAT...CATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477719.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCAGCTTCGCAGCCCCTaGGAGATGACAAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSQLRSP*EMTSLK
Trigger: CTTCAAGCTTGTCATCTCCCAGGGGCTGCGAAGCTG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TTGCCAGCTGAGGCCCTACTCTGGGCTGCCCTAAGGAGGGGTTTAGCTGTGAACGGCGTGTCGACAGCATaGACAGGGACACCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPAEALLWAALRRGLAVNGVSTA*TGTPGS
Trigger: GCTGCCTGGTGTCCCTGTCCATGCTGTCGACACGCC...GTTCACAGCTAAACCCCTCCTTAGGGCAGCCCAGAGTAGGGCCTCAGCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCCACTCCCATCAGGGCTaGTGTGGCCACCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGRHGEGQLTQPVKDGPSHSHQG*CGHHQQ
Trigger: CTGCTGATGGTGGCCACACCAGCCCTGATGGGAGTG...GGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR CCA 90 bp AGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCCTTCCCGTTGCTCCATaGCGAAGGCACGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SGRHGEGQLTQPVKDGPSLPVAP*RRHAQS
Trigger: GGACTGTGCGTGCCTTCGCCATGGAGCAACGGGAAG...GGAAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCATGTTGGAAAGCCCTTaGAACAAGGCGATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLMLESP*NKAMPR
Trigger: CCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACAT...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTATGTTGGAAAGCCCTTaGAACAAGGCGATGCCGCGG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSMLESP*NKAMPR
Trigger: CCGCGGCATCGCCTTGTTCCAAGGGCTTTCCAACAT...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTCCCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGGACCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPTWSLVYLATTSTSWPRDLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGGTC...CCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCGACCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPDLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGGTC...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTCCATGGCGAAGGCACGCACAGTCCGCACATTGCCCAGGGCCTCGTCTGCTACCAGAGAGGTTGGCCATaGACCTTTGCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LHGEGTHSPHIAQGLVCYQRGWP*TFALSG
Trigger: CCCAGACAGTGCAAAGGTCCATGGCCAACCTCTCTG...GTAGCAGACGAGGCCCTGGGCAATGTGCGGACTGTGCGTGCCTTCGCCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCAGAGAGGTTGGCCATaGACCTTTGCACTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSQRGWP*TFALSG
Trigger: CCCAGACAGTGCAAAGGTCCATGGCCAACCTCTCTG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCCACAGGACAGAGAGGTTaGCCATGGACCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: LSPSPNTDAWQRPHLRGPTGQRG*PWTFAL
Trigger: CAGTGCAAAGGTCCATGGCCAACCTCTCTGTCCTGT...GGGCCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp CGGATGAGCTCGGCGTATAGCCCGCCTTTCTTCAGGAGCTCTTCATGTGTCCCAGCAGCCCCCAGACAGTaGGATGCAGGGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RMSSAYSPPFFRSSSCVPAAPRQ*DAGVQG
Trigger: GCCCTGAACCCCTGCATCCCACTGTCTGGGGGCTGC...TGGGACACATGAAGAGCTCCTGAAGAAAGGCGGGCTATACGCCGAGCTCATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp ATTCCCTGGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGTTTCCTCCGCCAGACTaGCCCACGAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: IPWSYCRPGQFEAAGWGRFPPPD*PTRATI
Trigger: GATCGTGGCCCTCGTGGGCCAGTCTGGCGGAGGAAA...CCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCCAGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGAGCTACTGTAGGCCTGGCCAATTTGAAGCTGCTGGGTGGGGCAGGGAGACTGGCAGGGAAGCCACGGTaGTCTTTCCTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: GATVGLANLKLLGGAGRLAGKPR*SFLRQT
Trigger: AGTCTGGCGGAGGAAAGACCACCGTGGCTTCCCTGC...CAGTCTCCCTGCCCCACCCAGCAGCTTCAAATTGGCCAGGCCTACAGTAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CTGGATAGGGGAAGGATCCCAGTAGGAAGTGACAGCGGCACCAACATGGGGAGGTCACCACGCCTGCCGTaGGGTCGTAGAAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LDRGRIPVGSDSGTNMGRSPRLP*GRRSAP
Trigger: TGGAGCGCTTCTACGACCCCACGGCAGGCGTGGTGA...CCTCCCCATGTTGGTGCCGCTGTCACTTCCTACTGGGATCCTTCCCCTATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CCTACGTGGTCCCTTGTGTACTTGGCCACGACCTCTACCAGCTGGCCCAGGAGCTCTCAGGACTTGTGCTaGTGGCTCCTGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTWSLVYLATTSTSWPRSSQDLC*WLLGPS
Trigger: AGAAGGCCCCAGGAGCCACCAGCACAAGTCCTGAGA...GCTCCTGGGCCAGCTGGTAGAGGTCGTGGCCAAGTACACAAGGGACCACGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR CCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCCTAACACTGATGCTTaGCAGCGACCACACCTCAGG +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSPNTDA*QRPHLR
Trigger: CCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR CCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCTTTGAAGCTGCTGGGTaGGGCAGGGAGACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAFEAAG*GRETGQ
Trigger: CTGGCCAGTCTCCCTGCCCCACCCAGCAGCTTCAAA...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CCTCATCCACAGTCTCAGGGCCACAGGCGCCCATCACTCAGGATGTCTGCCTTCAGGCTCCTTCTCCCATaGAGGGAGTGGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: PHPQSQGHRRPSLRMSAFRLLLP*REWGHR
Trigger: CCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCT...GAAGGCAGACATCCTGAGTGATGGGCGCCTGTGGCCCTGAGACTGTGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCAGGTTGTTTGGAAGATaGGGACTGTGGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPRLFGR*GLWVPG
Trigger: CCCCGGGACCCACAGTCCCCATCTTCCAAACAACCT...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGCATTCAGCATCAAGCACAGCTAGGCTCCCACTCTCCACTGTGGAGCGAAGGACCTGCTGGGGATGCTaGCCTGTCCACAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: RHSASSTARLPLSTVERRTCWGC*PVHSRT
Trigger: GGTGCGGCTGTGGACAGGCCAGCATCCCCAGCAGGT...CCTTCGCTCCACAGTGGAGAGTGGGAGCCTAGCTGTGCTTGATGCTGAATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGTGAGCCAGGGGATAGGCTCCTTCTCCCATGGAGGGAGTGGGGACACAGGAGACCCACAGCCTGGATGTaGCTGGATAGGGGAAGGATC +
Preference number: 4 (lower is better)
Translates to: GEPGDRLLLPWREWGHRRPTAWM*LDRGRI
Trigger: GATCCTTCCCCTATCCAGCCACATCCAGGCTGTGGG...TCTCCTGTGTCCCCACTCCCTCCATGGGAGAAGGAGCCTATCCCCTGGCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CCTCATCCACAGTCTCAGGGCCACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCGTGGGTCCCACTCTaGCTCCTGCACGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: PHPQSQGHRRPSLRMSAFPWVPL*LLHANL
Trigger: CAAGTTTGCGTGCAGGAGCCAGAGTGGGACCCACGG...GAAGGCAGACATCCTGAGTGATGGGCGCCTGTGGCCCTGAGACTGTGGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp TGGGGGCAGGGACTGTCCTCATTCCCCATCGTGGGCTCAATGGCACATGACAGGCCGTGGGTCCCACTCTaGCTCCTGCACGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: WGQGLSSFPIVGSMAHDRPWVPL*LLHANL
Trigger: CAAGTTTGCGTGCAGGAGCCAGAGTGGGACCCACGG...CCTGTCATGTGCCATTGAGCCCACGATGGGGAATGAGGACAGTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp AGGGAGGGGTCAGGCCAACAAGCAGGGCCCCAGCAGGGCTTGTGGACTTGCCAGAGGCTGATGACTGAGTaGGTGAAGCAGGAACCACCT +
Preference number: 4 (lower is better)
Translates to: REGSGQQAGPQQGLWTCQRLMTE*VKQEPP
Trigger: AGGTGGTTCCTGCTTCACCCACTCAGTCATCAGCCT...CTGGCAAGTCCACAAGCCCTGCTGGGGCCCTGCTTGTTGGCCTGACCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp CACAGGCGCCCATCACTCAGGATGTCTGCCTTCCCCTTTCAAGGTGCGCCTCCCCCCACTGATGGGCACTaGGGGTGTCCAGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HRRPSLRMSAFPFQGAPPPTDGH*GCPVFP
Trigger: TGGAAAGACTGGACACCCCCAGTGCCCATCAGTGGG...GGGAGGCGCACCTTGAAAGGGGAAGGCAGACATCCTGAGTGATGGGCGCCTGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR CCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAAGCTTTGCACTGTCTaGGAGGCCACCAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLKLCTV*EATRKD
Trigger: GTCCTTCCTGGTGGCCTCCCAGACAGTGCAAAGCTT...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477092.5
CDS-3UTR TCA 90 bp GAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCAGCAATGCACCAGCATGCTaGCGCGGTAAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EARLELSGDQLWSSQRLSNAPAC*RGKTGA
Trigger: GGCTCCTGTTTTACCGCGTCAGCATGCTGGTGCATT...GCTGAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477092.5
ENST00000477719.5
CDS-3UTR TCA 90 bp AGGCTGAGCCCCAGCCCTAACACTGATGCTTGGCAGCGACCACACCTCAGGGGGCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: RLSPSPNTDAWQRPHLRGLAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...CCCCCTGAGGTGTGGTCGCTGCCAAGCATCAGTGTTAGGGCTGGGGCTCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000482309.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp GGGGAGGCCCGCCTTGAGCTGTCTGGTGATCAGCTCTGGTCATCCCAGAGGCTCCTGGCGATCTGCTCCTaGCACTGGCGAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: GEARLELSGDQLWSSQRLLAICS*HWRDNF
Trigger: AAAATTGTCTCGCCAGTGTCAGGAGCAGATCGCCAG...GAGCCTCTGGGATGACCAGAGCTGATCACCAGACAGCTCAAGGCGGGCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477092.5
ENST00000477719.5
ENST00000491920.1
CDS-3UTR TCA 90 bp GAAGTGGCAGGCATGGGGAAGGGCAGCTCACACAGCCTGTCAAGGATGGTCCTTCCACCAGGAAGGACATaGGGTCTCCCCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: EVAGMGKGSSHSLSRMVLPPGRT*GLPLSA
Trigger: AGCTGACAGGGGGAGACCTCATGTCCTTCCTGGTGG...AAGGACCATCCTTGACAGGCTGTGTGAGCTGCCCTTCCCCATGCCTGCCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477719.5
ENST00000491920.1
CDS-3UTR TCA 90 bp TGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCTCTGAAGCAGACGTTCTaGAATGTAACGGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: CQLLGPGFIVSRSSRSDSLKQTF*NVTEPR
Trigger: GCGTGGCTCCGTTACATTTCAGAACGTCTGCTTCAG...AGAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297504.10
ENST00000358849.9
ENST00000466514.5
ENST00000498578.5
ENST00000542328.5
CDS-3UTR TCA 90 bp TGTAACGGAGCCACGCAGCTGCTCTTTGGGGACGCAGCAGCCCCCAGACAGTGGCTGAAGCAGACGTTCTaGAATGTAACGGAGCCACGC +
Preference number: 4 (lower is better)
Translates to: CNGATQLLFGDAAAPRQWLKQTF*NVTEPR
Trigger: GCGTGGCTCCGTTACATTTCAGAACGTCTGCTTCAG...CCACTGTCTGGGGGCTGCTGCGTCCCCAAAGAGCAGCTGCGTGGCTCCGTTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466514.5
ENST00000470645.5
ENST00000482309.5
CDS-3UTR TCA 90 bp TGCTGTCCGGCCACAAGGGAGCCCCCAATAAATAGGGTACCCAAGACCATGCAGCCCCACGGACAGTGCTaGGCCGGTGGGCAATTACCA +
Preference number: 4 (lower is better)
Translates to: CCPATREPPINRVPKTMQPHGQC*AGGQLP
Trigger: TGGTAATTGCCCACCGGCTCAGCACTGTCCGTGGGG...CTGCATGGTCTTGGGTACCCTATTTATTGGGGGCTCCCTTGTGGCCGGACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466514.5
ENST00000482309.5
CDS-3UTR TCA 90 bp CTGCCAGCTGCTCGGCCCCGGCTTTATTGTGAGCAGGAGCAGCCGCAGCGACTCAGCCATCAGAGTACCTaGCAGCTGAGAATGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPAARPRLYCEQEQPQRLSHQST*QLRMSG
Trigger: TCCAGACATTCTCAGCTGTCAGGTACTCTGATGGCT...GAGTCGCTGCGGCTGCTCCTGCTCACAATAAAGCCGGGGCCGAGCAGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000498578.5
CDS-3UTR TCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCGCCAGTCTAGGGAAGTaGGGTCCTAGCAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAASLGK*GPSKGV
Trigger: CACACCCTTGCTAGGACCTCACTTCCCTAGACTGGC...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5
CDS-3UTR TCA 90 bp AGCCAAGGACCTACTTGTGTGCCTTTCCAGGCCCCTCAGAAGCCAGCTGGAGCCCCTGAGGCTGATGACTaGGTGGGTGAAGCAGGAACC +
Preference number: 4 (lower is better)
Translates to: SQGPTCVPFQAPQKPAGAPEADD*VGEAGT
Trigger: GGTTCCTGCTTCACCCACTCAGTCATCAGCCTCAGG...GGCTCCAGCTGGCTTCTGAGGGGCCTGGAAAGGCACACAAGTAGGTCCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358849.9
ENST00000542328.5