Pregenerated sensors for IER3IP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090000Ensembl transcript IDs: ENSMUST00000026487.6, ENSMUST00000136800.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGCAAAGGCTTCCTAACAGACAGTCACGGGAGCAGGCTAGTCTaGCTGTATGGGCTGATTTTGCCAACTAACAGTTACACTGATTTT | + |
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Preference number: 1 (lower is better) Translates to: EGKGFLTDSHGSRLV*LYGLILPTNSYTDF Trigger: AAAATCAGTGTAACTGTTAGTTGGCAAAATCAGCCCATACAGTCAGACTAGCCTGCTCCCGTGACTGTCTGTTAGGAAGCCTTTGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCACAACCTAAGGAAGGCAAAGGCTTCCTAACAGACAGTCACGGGAGCAGGTCTGACTGTATGGGCTaGTTTTGCCAACTAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: EAQPKEGKGFLTDSHGSRSDCMG*FCQLTV Trigger: AACTGTTAGTTGGCAAAATCAGCCCATACAGTCAGA...CCTGCTCCCGTGACTGTCTGTTAGGAAGCCTTTGCCTTCCTTAGGTTGTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR-3UTR GCA 90 bp | CCTACAGACAGAATTAAGAATCATACCTACAGCATGCCACTCCGCCGAGGAATGAAGGCAGCAGTTTTGTaGCCTTTCCTAGCCTTTACC | + |
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Preference number: 2 (lower is better) Translates to: PTDRIKNHTYSMPLRRGMKAAVL*PFLAFT Trigger: GGTAAAGGCTAGGAAAGGGCACAAAACTGCTGCCTT...CATTCCTCGGCGGAGTGGCATGCTGTAGGTATGATTCTTAATTCTGTCTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR-3UTR TCA 90 bp | AGAATTAAGAATCATACCTACAGCATGCCACTCCGCCGAGGAATGGAAGCACAACTTCTTCTCAGTCTCTaGTTTCCCAACGATGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: RIKNHTYSMPLRRGMEAQLLLSL*FPNDVQ Trigger: CTGAACATCGTTGGGAAATCAGAGACTGAGAAGAAG...TTGTGCTTCCATTCCTCGGCGGAGTGGCATGCTGTAGGTATGATTCTTAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCCAATCCGGGAGTGCTCCTGCCTCTGATAATCTGATCTACAAGTGCAACACAGAAAGTAACTTCTaGGGCTTTTCTTCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: MLQSGSAPASDNLIYKCNTESNF*GFSSSQ Trigger: CTGAGAAGAAGAAAAGCCCCAGAAGTTACTTTCTGT...GTTGCACTTGTAGATCAGATTATCAGAGGCAGGAGCACTCCCGGATTGGAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACGAACAAACGAAAGCTACTTAGAATCAACAACCTACCTACAGACAGAATTTCTGACTGTATGGGCTaGTTTTGCCAACTAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: QTNKRKLLRINNLPTDRISDCMG*FCQLTV Trigger: AACTGTTAGTTGGCAAAATCAGCCCATACAGTCAGA...AATTCTGTCTGTAGGTAGGTTGTTGATTCTAAGTAGCTTTCGTTTGTTCGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGCACAACCTAAGGAAGGCAAAGGCTTCCTAACAGACAGTCACGGGAGCAGGACAAAGGCAGCAGTTTaGTGCCCTTTCCTAGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: EAQPKEGKGFLTDSHGSRTKAAV*CPFLAF Trigger: AAAGGCTAGGAAAGGGCACAAAACTGCTGCCTTTGT...CCTGCTCCCGTGACTGTCTGTTAGGAAGCCTTTGCCTTCCTTAGGTTGTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR-3UTR CAA 90 bp | CCTACAGACAGAATTAAGAATCATACCTACAGCATGCCACTCCGCCGAGGAATGCTGTATGGGCTGATTTaGCCAACTAACAGTTACACT | + |
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Preference number: 3 (lower is better) Translates to: PTDRIKNHTYSMPLRRGMLYGLI*PTNSYT Trigger: AGTGTAACTGTTAGTTGGCAAAATCAGCCCATACAG...CATTCCTCGGCGGAGTGGCATGCTGTAGGTATGATTCTTAATTCTGTCTGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR TCA 72 bp | AAAGTAACTTCTGGGGCTTTTCTTCTTCTCAGTCTCTaGTTTCCCAACGATGTTCAGCCAAATAACAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: KVTSGAFLLLSL*FPNDVQPNNRS Trigger: GCTTCTGTTATTTGGCTGAACATCGTTGGGAAATCAGAGACTGAGAAGAAGAAAAGCCCCAGAAGTTACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| 3UTR-3UTR CAA 90 bp | CAGACGAACAAACGAAAGCTACTTAGAATCAACAACCTACCTACAGACAGAATTCTGTATGGGCTGATTTaGCCAACTAACAGTTACACT | + |
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Preference number: 3 (lower is better) Translates to: QTNKRKLLRINNLPTDRILYGLI*PTNSYT Trigger: AGTGTAACTGTTAGTTGGCAAAATCAGCCCATACAG...AATTCTGTCTGTAGGTAGGTTGTTGATTCTAAGTAGCTTTCGTTTGTTCGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| 3UTR GCA 72 bp | TTTCCAGAATTAGAATTCTCTCTGAAATCACGGCATTaGCCCGTAGAGTTACCTACAAATTTCTTTATAGCA | + |
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Preference number: 3 (lower is better) Translates to: FPELEFSLKSRH*PVELPTNFFIA Trigger: TGCTATAAAGAAATTTGTAGGTAACTCTACGGGGCAATGCCGTGATTTCAGAGAGAATTCTAATTCTGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| CDS-3UTR GCA 90 bp | AGAATTAAGAATCATACCTACAGCATGCCACTCCGCCGAGGAATGGAAGCACAAAGGAAGCGCTCCTCGTaGAGCACGGCGATGGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: RIKNHTYSMPLRRGMEAQRKRSS*STAMAF Trigger: GAACGCCATCGCCGTGCTGCACGAGGAGCGCTTCCT...TTGTGCTTCCATTCCTCGGCGGAGTGGCATGCTGTAGGTATGATTCTTAATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| CDS-3UTR CCA 90 bp | GAAGCACAACCTAAGGAAGGCAAAGGCTTCCTAACAGACAGTCACGGGAGCAGGAATCCACCGATTCCCTaGTCTGTTCCCCAGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: EAQPKEGKGFLTDSHGSRNPPIP*SVPQPM Trigger: CATTGGCTGGGGAACAGACCAGGGAATCGGTGGATT...CCTGCTCCCGTGACTGTCTGTTAGGAAGCCTTTGCCTTCCTTAGGTTGTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026487.6 |
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| CDS-3UTR TCA 90 bp | ATGAATATTCCGGTCACAACAGAAAGTAACTTCTGGGGCTTTTCTTCTTCTCAGCCCAGCCAATGTTCTTaGGGAAGCGCTCCTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: MNIPVTTESNFWGFSSSQPSQCS*GSAPRA Trigger: TGCACGAGGAGCGCTTCCTCAAGAACATTGGCTGGG...CTGAGAAGAAGAAAAGCCCCAGAAGTTACTTTCTGTTGTGACCGGAATATTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026487.6 |
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| CDS-3UTR GCA 90 bp | AGACGAACAAACGAAAGCTACTTAGAATCAACAACCTACCTACAGACAGAATTAAGGAAGCGCTCCTCGTaGAGCACGGCGATGGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: RRTNESYLESTTYLQTELRKRSS*STAMAF Trigger: GAACGCCATCGCCGTGCTGCACGAGGAGCGCTTCCT...TAATTCTGTCTGTAGGTAGGTTGTTGATTCTAAGTAGCTTTCGTTTGTTCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| CDS-3UTR TCA 90 bp | AATATTCCGGTCACAACAGAAAGTAACTTCTGGGGCTTTTCTTCTTCTCAGTCTCTTGGTTCATGTTCTTaGGGAAGCGCTCCTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: NIPVTTESNFWGFSSSQSLGSCS*GSAPRA Trigger: TGCACGAGGAGCGCTTCCTCAAGAACATGAACCAAG...AGACTGAGAAGAAGAAAAGCCCCAGAAGTTACTTTCTGTTGTGACCGGAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS-3UTR TCA 90 bp | AGAATTAAGAATCATACCTACAGCATGCCACTCCGCCGAGGAATGGAAGCACAACGTTTCTGTATTCATTaGTTCCAGTCCTTGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RIKNHTYSMPLRRGMEAQRFCIH*FQSLVH Trigger: ATGAACCAAGGACTGGAATCAATGAATACAGAAACG...TTGTGCTTCCATTCCTCGGCGGAGTGGCATGCTGTAGGTATGATTCTTAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS-3UTR CCA 90 bp | AGACGAACAAACGAAAGCTACTTAGAATCAACAACCTACCTACAGACAGAATTAAATCCACCGATTCCCTaGTCTGTTCCCCAGCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: RRTNESYLESTTYLQTELNPPIP*SVPQPN Trigger: ATTTGGCTGGGGAACAGACCAGGGAATCGGTGGATT...TAATTCTGTCTGTAGGTAGGTTGTTGATTCTAAGTAGCTTTCGTTTGTTCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS-3UTR CCA 90 bp | CAGACGAACAAACGAAAGCTACTTAGAATCAACAACCTACCTACAGACAGAATTATTGATTCCAGTCCTTaGTTCATGTTCTTGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QTNKRKLLRINNLPTDRIIDSSP*FMFLRK Trigger: CTTCCTCAAGAACATGAACCAAGGACTGGAATCAAT...AATTCTGTCTGTAGGTAGGTTGTTGATTCTAAGTAGCTTTCGTTTGTTCGTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| 3UTR CAA 72 bp | GTTTCCAGAATTAGAATTCTCTCTGAAATCACGGCATaGCCCCGTAGAGTTACCTACAAATTTCTTTATAGC | + |
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Preference number: 4 (lower is better) Translates to: VSRIRILSEITA*PRRVTYKFLYS Trigger: GCTATAAAGAAATTTGTAGGTAACTCTACGGGGCAATGCCGTGATTTCAGAGAGAATTCTAATTCTGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026487.6 ENSMUST00000136800.2 |
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| CDS TCA 90 bp | GTTGCAGAAACCATAACGTGTGCGTGTCTTCGTTTCTGTATTCATTaGTTCCAGTCCTTGGTTCATGTTCTTGAGGAAGCGCTCCTCGTG | + |
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Preference number: 5 (lower is better) Translates to: VAETITCACLRFCIH*FQSLVHVLEEALLV Trigger: CACGAGGAGCGCTTCCTCAAGAACATGAACCAAGGACTGGAATCAATGAATACAGAAACGAAGACACGCACACGTTATGGTTTCTGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS TCA 90 bp | TCACTATACAGCATGAAGCAACTGGACCCGGCTGGCATGAAGATTTaGTTGCCAAGTTGCAGAAACCATAACGTGTGCGTGTCTTCGTTT | + |
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Preference number: 5 (lower is better) Translates to: SLYSMKQLDPAGMKI*LPSCRNHNVCVSSF Trigger: AAACGAAGACACGCACACGTTATGGTTTCTGCAACTTGGCAATCAAATCTTCATGCCAGCCGGGTCCAGTTGCTTCATGCTGTATAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS-3UTR CAA 90 bp | ATGAATATTCCGGTCACAACAGAAAGTAACTTCTGGGGCTTTTCTTCTTCTCAGCCTTGGTTCATGTTCTaGAGGAAGCGCTCCTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: MNIPVTTESNFWGFSSSQPWFMF*RKRSSC Trigger: GCACGAGGAGCGCTTCCTCAAGAACATGAACCAAGG...CTGAGAAGAAGAAAAGCCCCAGAAGTTACTTTCTGTTGTGACCGGAATATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS-3UTR CAA 90 bp | ACAGACAGAATTAAGAATCATACCTACAGCATGCCACTCCGCCGAGGAATGGAAGGCTGGCATGAAGATTaGATTGCCAAGTTGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: TDRIKNHTYSMPLRRGMEGWHED*IAKLQK Trigger: TTTCTGCAACTTGGCAATCAAATCTTCATGCCAGCC...TTCCATTCCTCGGCGGAGTGGCATGCTGTAGGTATGATTCTTAATTCTGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS-3UTR CAA 90 bp | CAGACGAACAAACGAAAGCTACTTAGAATCAACAACCTACCTACAGACAGAATTTCGTTTCTGTATTCATaGATTCCAGTCCTTGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QTNKRKLLRINNLPTDRISFLYS*IPVLGS Trigger: TGAACCAAGGACTGGAATCAATGAATACAGAAACGA...AATTCTGTCTGTAGGTAGGTTGTTGATTCTAAGTAGCTTTCGTTTGTTCGTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS CAA 72 bp | TCTGTATTCATTGATTCCAGTCCTTGGTTCATGTTCTaGAGGAAGCGCTCCTCGTGCAGCACGGCGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SVFIDSSPWFMF*RKRSSCSTAMA Trigger: CGCCATCGCCGTGCTGCACGAGGAGCGCTTCCTCAAGAACATGAACCAAGGACTGGAATCAATGAATACAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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| CDS TCA 72 bp | AGCATGAAGCAACTGGACCCGGCTGGCATGAAGATTTaGTTGCCAAGTTGCAGAAACCATAACGTGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SMKQLDPAGMKI*LPSCRNHNVCV Trigger: CACGCACACGTTATGGTTTCTGCAACTTGGCAATCAAATCTTCATGCCAGCCGGGTCCAGTTGCTTCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136800.2 |
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