Pregenerated sensors for HTR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024798Ensembl transcript IDs: ENSMUST00000099505.4, ENSMUST00000164639.8, ENSMUST00000164781.2, ENSMUST00000165215.8, ENSMUST00000166074.2, ENSMUST00000170360.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCCACACTCCCTGCTCATAACACACCATTATGGACCAGCCCCGTaGGCTCCTTGTACCCTTGTAGAAGATGAGAGTAAACAACATGCC | + |
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Preference number: 1 (lower is better) Translates to: LPHSLLITHHYGPAP*APCTLVEDESKQHA Trigger: GGCATGTTGTTTACTCTCATCTTCTACAAGGGTACAAGGAGCCCACGGGGCTGGTCCATAATGGTGTGTTATGAGCAGGGAGTGTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR GCA 90 bp | CTGTTGTGCAGTCTCAGCCAATGGTTTCGTTGTTTCCCCCTGTTCTaGATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATG | + |
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Preference number: 1 (lower is better) Translates to: LLCSLSQWFRCFPLF*ITSSPGFRSGSCIM Trigger: CATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAACAACGAAACCATTGGCTGAGACTGCACAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| 3UTR TCA 90 bp | GTTCAAGTGAGAGCTAATTCACACAATTCAAACAGTCCAGTTGGATaGCCATGTTTATACTGTCTCCAGAAACAACCACAATCATTCATG | + |
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Preference number: 1 (lower is better) Translates to: VQVRANSHNSNSPVG*PCLYCLQKQPQSFM Trigger: CATGAATGATTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACTGGACTGTTTGAATTGTGTGAATTAGCTCTCACTTGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGAGTGTGAGTACAAGGCCACCCACAGCGGGATaGAGCTACAGGAGGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LFSSYHSLSGAFRSVSTRPPTAG*SYRRCH Trigger: GTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGG...CCTTGTACTCACACTCCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACCACAAAGCCTAGACGGGAAGCATGGGAATTGTGCGTTAGGATTTCCCCCCACGCGTGGGAAGCCTaGGAACTTGTGTTTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VTTKPRREAWELCVRISPHAWEA*ELVFGC Trigger: GCAGCCAAACACAAGTTCTCAGGCTTCCCACGCGTG...GGGGGAAATCCTAACGCACAATTCCCATGCTTCCCGTCTAGGCTTTGTGGTAAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCCTTGTAGGCATGGGTACTCTTCTGATCTGTGCCTTTCCCTCTCCTTCATCAGGGCTTCGTGCATaGCTGCAGCAGAGAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CPLVGMGTLLICAFPSPSSGLRA*LQQRAS Trigger: GGAAGCTCTCTGCTGCAGGCATGCACGAAGCCCTGA...TGAAGGAGAGGGAAAGGCACAGATCAGAAGAGTACCCATGCCTACAAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR GCA 90 bp | GACCATTTTTATTGGTGGGAGGGAGTTAAGGGACAGAATTCATCAGGCACACATCCACCCACAGCGGGATaGAGCTACAGGAGGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: DHFYWWEGVKGQNSSGTHPPTAG*SYRRCH Trigger: GTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGG...ATGTGTGCCTGATGAATTCTGTCCCTTAACTCCCTCCCACCAATAAAAATGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGTGCCTCTCTCCATCCTaGGATCTGTTCCTGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: VMRHSLFSSYHSLSGAFRCLSPS*DLFLSY Trigger: GTAACTCAGGAACAGATCTCAGGATGGAGAGAGGCA...CCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGTGCAGTCTCAGCCAATaGTTTCGTTGTTTCCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VMRHSLFSSYHSLSGAFRCSLSQ*FRCFPL Trigger: CAGGGGGAAACAACGAAACCATTGGCTGAGACTGCA...CCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGAGTGTGAGTACAAGGCCCCAAGGTAGTGGCTaGTTTCTGTTCCCTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: LFSSYHSLSGAFRSVSTRPQGSG*FLFPLE Trigger: TTCAAGAGGGAACAGAAAGCAGCCACTACCTTGGGG...CCTTGTACTCACACTCCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCGGCTTCGTGCATGCCTaGAGCAGAGAGCTTCCGGTT | + |
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Preference number: 2 (lower is better) Translates to: LQECEYKEKLYSGFLPLSGFVHA*SRELPV Trigger: AACCGGAAGCTCTCTGCTGCAGGCATGCACGAAGCC...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR GCA 90 bp | ATGATAAAGGATTTAACGGTGGACATACACTGGTGGAAAGTCACAAGGACCCTGTCAGGGCTTCGTGCATaGCTGCAGCAGAGAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: MIKDLTVDIHWWKVTRTLSGLRA*LQQRAS Trigger: GGAAGCTCTCTGCTGCAGGCATGCACGAAGCCCTGA...CAGGGTCCTTGTGACTTTCCACCAGTGTATGTCCACCGTTAAATCCTTTATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGCTCATGAATGGTTCCTaGAGAGTTACCACAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VMRHSLFSSYHSLSGAFRLMNGS*RVTTKP Trigger: AGGCTTTGTGGTAACTCTTCAGGAACCATTCATGAG...CCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGACACATTCAACACGATaGTTACTGCAGTTTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VMRHSLFSSYHSLSGAFRTHSTR*LLQFAW Trigger: CCAAGCAAACTGCAGTAAGCATCGTGTTGAATGTGT...CCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGTTGATATTCCGGTACTaGCACTGGAGTAGGCTACGA | + |
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Preference number: 2 (lower is better) Translates to: TPCHISAMPRRQKPSSVVLIFRY*HWSRLR Trigger: TCGTAGCCTACTCCAGTGCCAGTACCGGAATATCAA...CACAACAGAACTTGGCTTCTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000170360.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTACCGCAGAGATGACTaGCTGTCTGACACTGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GAFRSVSTRKSFIQVFCLYRRDD*LSDTEH Trigger: ATGCTCAGTGTCAGACAGCCAGTCATCTCTGCGGTA...GAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAGGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCGTGGACATACACTGGTaGAAAGTCACAAGGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLQECEYKEKLYSGFLPLVDIHW*KVTRTL Trigger: CAGGGTCCTTGTGACTTTCCACCAGTGTATGTCCAC...GAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCTGTTTCCCCCTGTTCTaGATTACTTCTTCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LQECEYKEKLYSGFLPLSCFPLF*ITSSPG Trigger: CCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAACA...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTAATATACAATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTGAGAACTTGTGTTTaGCTGCGCTCTTCCTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: MLIYNAVMRHSLFSSYHSLRTCV*LRSSWR Trigger: CCGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAG...AGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATTGTATATTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGGAAGAAGTCCATAATCTCTTCCACCTCCTTCTaGAGTTTCACCACGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: RGPALIINISDIWKKSIISSTSF*SFTTPF Trigger: GAATGGCGTGGTGAAACTCCAGAAGGAGGTGGAAGA...GATTATGGACTTCTTCCAGATGTCACTGATGTTTATTATGAGAGCAGGACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCCTCATGAATGGTTCCTaGAGAGTTACCACAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LQECEYKEKLYSGFLPLSLMNGS*RVTTKP Trigger: AGGCTTTGTGGTAACTCTTCAGGAACCATTCATGAG...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCGATATAAAACGCCACTaGGGTGGAGTAGATCGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LQECEYKEKLYSGFLPLSDIKRH*GGVDRV Trigger: TACACGATCTACTCCACCGCAGTGGCGTTTTATATC...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTTCCAGAGTATTAACAATGGGGGTTCAAGTGAGAGCTAATTCACACAATTGCAGTCTCAGCCAATaGTTTCGTTGTTTCCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: WCSRVLTMGVQVRANSHNCSLSQ*FRCFPL Trigger: CAGGGGGAAACAACGAAACCATTGGCTGAGACTGCA...ATTGTGTGAATTAGCTCTCACTTGAACCCCCATTGTTAATACTCTGGAACACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTGGGCTCCTTGTACCCTTGTAGAAGATGAGAGTAAACAACATGCCAAGAATCTTTCTGTTCCCTCTTaGAGATGGAAATGTTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PWAPCTLVEDESKQHAKNLSVPS*RWKCFS Trigger: GGAAAAACATTTCCATCTTCAAGAGGGAACAGAAAG...ATTCTTGGCATGTTGTTTACTCTCATCTTCTACAAGGGTACAAGGAGCCCACGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCATGCTTACTGCAGTTTaGTTGGAAAGACACCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LQECEYKEKLYSGFLPLSMLTAV*LERHPS Trigger: AGAAGGGTGTCTTTCCAAGCAAACTGCAGTAAGCAT...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCAAGTCACAAGGACCCTaGAGAAAAGCCACAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: LQECEYKEKLYSGFLPLSKSQGP*RKATVF Trigger: AAATACTGTGGCTTTTCTGCAGGGTCCTTGTGACTT...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTTTGATATTCCGGTACTaGCACTGGAGTAGGCTACGA | + |
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Preference number: 2 (lower is better) Translates to: LLQFAWKDTLLIDHKMNSLIFRY*HWSRLR Trigger: TCGTAGCCTACTCCAGTGCCAGTACCGGAATATCAA...AGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000170360.2 |
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| 3UTR-3UTR CCA 90 bp | TTAATATACAATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTTGATATTCCGGTACTaGCACTGGAGTAGGCTACGA | + |
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Preference number: 2 (lower is better) Translates to: LIYNAVMRHSLFSSYHSLLIFRY*HWSRLR Trigger: TCGTAGCCTACTCCAGTGCCAGTACCGGAATATCAA...GAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATTGTATATTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGATGACCATGTTTATACTGTCTCCAGAAACAACCACAATCATTCATGGAGTGGACATACACTGGTaGAAAGTCACAAGGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SWMTMFILSPETTTIIHGVDIHW*KVTRTL Trigger: CAGGGTCCTTGTGACTTTCCACCAGTGTATGTCCAC...TCCATGAATGATTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTCTGATCTGTGCCTTTCCCTCTCCTTCACCCAGACTACTACATAGTAACTTTGACCATTTTTATTaGTGGGAGGGAGTTAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLLICAFPSPSPRLLHSNFDHFY*WEGVKG Trigger: TCCCTTAACTCCCTCCCACCAATAAAAATGGTCAAA...GTTACTATGTAGTAGTCTGGGTGAAGGAGAGGGAAAGGCACAGATCAGAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGATGACCATGTTTATACTGTCTCCAGAAACAACCACAATCATTCATGGATGTTTCCCCCTGTTCTaGATTACTTCTTCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SWMTMFILSPETTTIIHGCFPLF*ITSSPG Trigger: CCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAACA...TCCATGAATGATTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTATGGATGTGGATTTGTaGAAAGCACCAGAAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLQFAWKDTLLIDHKMNSMDVDL*KAPETA Trigger: AGCAGTTTCTGGTGCTTTCCACAAATCCACATCCAT...AGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| 3UTR-3UTR GCA 90 bp | GTATTAACAATGGGGGTTCAAGTGAGAGCTAATTCACACAATTCAAACAGTCCAAAAACAGAGAGAGGTTaGCATCTCCCTCAAGATACA | + |
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Preference number: 2 (lower is better) Translates to: VLTMGVQVRANSHNSNSPKTERG*HLPQDT Trigger: TGTATCTTGAGGGAGATGGCAACCTCTCTCTGTTTT...TGGACTGTTTGAATTGTGTGAATTAGCTCTCACTTGAACCCCCATTGTTAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR GCA 72 bp | TTCACCACGCCATTCAGGGAGATGACGCTCTCCGGCTaGACGCGTGGGAAGCCTGAGAACTTGTGTTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: FTTPFREMTLSG*TRGKPENLCLA Trigger: AGCCAAACACAAGTTCTCAGGCTTCCCACGCGTGCAGCCGGAGAGCGTCATCTCCCTGAATGGCGTGGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR GCA 72 bp | GATGCAGCTACAGGAGGTGCCACAGATAAAGGGCCTTaGTGTGGACAAGAGGAAAAACGGCAGCCAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: DAATGGATDKGP*CGQEEKRQPAH Trigger: GTGTGCTGGCTGCCGTTTTTCCTCTTGTCCACAGCAAGGCCCTTTATCTGTGGCACCTCCTGTAGCTGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR CCA 72 bp | GCTATTGCCACACTCCCTGCTCATAACACACCATTATaGACCAGCCCCGTGGGCTCCTTGTACCCTTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AIATLPAHNTPL*TSPVGSLYPCR Trigger: TCTACAAGGGTACAAGGAGCCCACGGGGCTGGTCCATAATGGTGTGTTATGAGCAGGGAGTGTGGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| 3UTR GCA 72 bp | CAGCCATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTaGAGTCTCAGCCAATGGTTTCGTTGTTTCCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: QPCQEDRSQVLL*SLSQWFRCFPL Trigger: CAGGGGGAAACAACGAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGCATGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| 3UTR TCA 72 bp | TGGCTGATCAAGCACACTTTGTCATCGTTCACATTCTaGGCCCATCCGAAGAGAGGAGGTAAGGTGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: WLIKHTLSSFTF*AHPKRGGKVME Trigger: CTCCATCACCTTACCTCCTCTCTTCGGATGGGCTCAGAATGTGAACGATGACAAAGTGTGCTTGATCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR GCA 72 bp | AGTCTCAGCCAATGGTTTCGTTGTTTCCCCCTGTTCTaGATTACTTCTTCTCCAGGGTTCCGCTCTGGATCA | + |
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Preference number: 3 (lower is better) Translates to: SLSQWFRCFPLF*ITSSPGFRSGS Trigger: TGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAACAACGAAACCATTGGCTGAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGGAAGAAGTCCATAATCCCTGAGAACTTGTGTTaGGCTGCGCTCTTCCTGGCG | + |
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Preference number: 3 (lower is better) Translates to: RGPALIINISDIWKKSIIPENLC*AALFLA Trigger: CGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAGG...GATTATGGACTTCTTCCAGATGTCACTGATGTTTATTATGAGAGCAGGACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR TCA 72 bp | CTGCGGTGGAGTAGATCGTGTAGCCAAAATCCTGGCTaGTCAAGCACACTTTGTCATCGTTCACATTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LRWSRSCSQNPG*SSTLCHRSHSE Trigger: CTCAGAATGTGAACGATGACAAAGTGTGCTTGATCAGCCAGGATTTTGGCTACACGATCTACTCCACCGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
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| 3UTR-3UTR CAA 90 bp | CCACAGGAAAGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGGAAGAAGCAGCCAATGGTTTCGTaGTTTCCCCCTGTTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PQERGPALIINISDIWKKQPMVS*FPPVLH Trigger: ATGCAGAACAGGGGGAAACAACGAAACCATTGGCTG...CTTCTTCCAGATGTCACTGATGTTTATTATGAGAGCAGGACCCCTTTCCTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCCTTACTGCAGTTTGCTaGGAAAGACACCCTTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: NAVMRHSLFSSYHSLSGALTAVC*ERHPSD Trigger: ATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAAG...GGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTATTTAACAGAAGCTTaGAATGAACACTGCTCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: NAVMRHSLFSSYHSLSGAYLTEA*NEHCSG Trigger: CCCGGAGCAGTGTTCATTCAAAGCTTCTGTTAAATA...GGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGCAGTCTCAGCCAATGGTTTCACCGACAGAATCATTTaGGCCATACATTTCCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: HAKKTEAKFCCAVSANGFTDRII*AIHFPF Trigger: GAATGGGAAATGTATGGCCAAAATGATTCTGTCGGT...GAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
||
| 3UTR TCA 72 bp | CCAGTTACCATTCTCTCTCAGGAGCCTTCAGGAGTGTaGGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PVTILSQEPSGV*VQGKALFRFSA Trigger: GGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAGGCTCCTGAGAGAGAATGGTAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR GCA 72 bp | CGGTGGACATACACTGGTGGAAAGTCACAAGGACCCTaGAGAAAAGCCACAGTATTTAACAGAAGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RWTYTGGKSQGP*RKATVFNRSFE Trigger: TTCAAAGCTTCTGTTAAATACTGTGGCTTTTCTGCAGGGTCCTTGTGACTTTCCACCAGTGTATGTCCACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCCTTACTGCAGTTTGCTaGGAAAGACACCCTTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LQECEYKEKLYSGFLPLSLTAVC*ERHPSD Trigger: ATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAAG...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGATAAAGGATTTAACGGTGGACATACACTGGTGGAAAGTCACAAGGACCCTGCTTACTGCAGTTTGCTaGGAAAGACACCCTTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: MIKDLTVDIHWWKVTRTLLTAVC*ERHPSD Trigger: ATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAAG...CAGGGTCCTTGTGACTTTCCACCAGTGTATGTCCACCGTTAAATCCTTTATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTCCTTATCTGTCCTTAACTTTGACCATTTTTATTGGTGGGAGGGAGTTACAGCCAATGGTTTCGTaGTTTCCCCCTGTTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LFPYLSLTLTIFIGGRELQPMVS*FPPVLH Trigger: ATGCAGAACAGGGGGAAACAACGAAACCATTGGCTG...TAACTCCCTCCCACCAATAAAAATGGTCAAAGTTAAGGACAGATAAGGAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGGAAAGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGGAAGAAGTATCTGTCCTTAACTTaGACCATTTTTATTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQERGPALIINISDIWKKYLSLT*TIFIGG Trigger: CCCACCAATAAAAATGGTCAAAGTTAAGGACAGATA...CTTCTTCCAGATGTCACTGATGTTTATTATGAGAGCAGGACCCCTTTCCTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR CCA 72 bp | GTTTCCTTATCTGTCCTTAACTTTGACCATTTTTATTaGTGGGAGGGAGTTAAGGGACAGAATTCATCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VSLSVLNFDHFY*WEGVKGQNSSG Trigger: GCCTGATGAATTCTGTCCCTTAACTCCCTCCCACCAATAAAAATGGTCAAAGTTAAGGACAGATAAGGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGATGACCATGTTTATACTGTCTCCAGAAACAACCACAATCATTCATGGAAAAAACAGAGAGAGGTaGCCATCTCCCTCAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: SWMTMFILSPETTTIIHGKNRER*PSPSRY Trigger: GTATCTTGAGGGAGATGGCAACCTCTCTCTGTTTTT...TCCATGAATGATTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTCCTTATCTGTCCTTAACTTTGACCATTTTTATTGGTGGGAGGGAGTTAAAAAACAGAGAGAGGTaGCCATCTCCCTCAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: LFPYLSLTLTIFIGGRELKNRER*PSPSRY Trigger: GTATCTTGAGGGAGATGGCAACCTCTCTCTGTTTTT...TAACTCCCTCCCACCAATAAAAATGGTCAAAGTTAAGGACAGATAAGGAAACAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATTAACAATGGGGGTTCAAGTGAGAGCTAATTCACACAATTCAAACAGTCCACTCATGGATGTGGATTaGTGGAAAGCACCAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: VLTMGVQVRANSHNSNSPLMDVD*WKAPET Trigger: AGTTTCTGGTGCTTTCCACAAATCCACATCCATGAG...TGGACTGTTTGAATTGTGTGAATTAGCTCTCACTTGAACCCCCATTGTTAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTAATATACAATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTACCGACAGAATCATTTaGGCCATACATTTCCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: MLIYNAVMRHSLFSSYHSTDRII*AIHFPF Trigger: GAATGGGAAATGTATGGCCAAAATGATTCTGTCGGT...AGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATTGTATATTAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 |
||
| 3UTR TCA 72 bp | AGAGCTAATTCACACAATTCAAACAGTCCAGTTGGATaGCCATGTTTATACTGTCTCCAGAAACAACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: RANSHNSNSPVG*PCLYCLQKQPQ Trigger: TTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACTGGACTGTTTGAATTGTGTGAATTAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCTCCCAGAACCCAGCGCTGTAGTGTGCTTACCGCAGAGATGACTGGCGCTAGCTGTCACCTCTaGGAAGCCGCTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPPRTQRCSVLTAEMTGASCHL*EAAQQV Trigger: CACCTGCTGAGCGGCTTCCCAGAGGTGACAGCTAGC...GCCAGTCATCTCTGCGGTAAGCACACTACAGCGCTGGGTTCTGGGAGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | GGACCAGCCCCGTGGGCTCCTTGTACCCTTGTAGAAGATGAGAGTAAACAACATGAGCTCACCACCGAGTaGGCGCCACCGTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPAPWAPCTLVEDESKQHELTTE*APPSGL Trigger: GAGCCCCGACGGTGGCGCCCACTCGGTGGTGAGCTC...ATGTTGTTTACTCTCATCTTCTACAAGGGTACAAGGAGCCCACGGGGCTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGAACCCAGCGCTGTAGTGTGCTTACCGCAGAGATGACTGGCTGTCTGACAGCTAGCTGTCACCTCTaGGAAGCCGCTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRTQRCSVLTAEMTGCLTASCHL*EAAQQV Trigger: CACCTGCTGAGCGGCTTCCCAGAGGTGACAGCTAGC...TGTCAGACAGCCAGTCATCTCTGCGGTAAGCACACTACAGCGCTGGGTTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTTGCCATCTCCCTCAAGATACACTTTGTACAACAGATCACCCCTTGTCACGAGCTCACCACCGAGTaGGCGCCACCGTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVAISLKIHFVQQITPCHELTTE*APPSGL Trigger: GAGCCCCGACGGTGGCGCCCACTCGGTGGTGAGCTC...GTGACAAGGGGTGATCTGTTGTACAAAGTGTATCTTGAGGGAGATGGCAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | GTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGTCACCACCAGGCAGTTaGCCGCGATCGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VMRHSLFSSYHSLSGAFRSPPGS*PRSSAA Trigger: CGCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGA...CCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| CDS-3UTR GCA 90 bp | CCCCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGAAGCCGCTCAGCAGGTaGGGCATCCAGGAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLFCITSSPGFRSGSCIMKPLSR*GIQELT Trigger: GGTGAGCTCCTGGATGCCGCACCTGCTGAGCGGCTT...CATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | CTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTTTGAGCTCACCACCGAGTaGGCGCCACCGTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHYFFSRVPLWIMYHDLFELTTE*APPSGL Trigger: GAGCCCCGACGGTGGCGCCCACTCGGTGGTGAGCTC...AAAAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCGAGCTCACCACCGAGTaGGCGCCACCGTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQECEYKEKLYSGFLPLSELTTE*APPSGL Trigger: GAGCCCCGACGGTGGCGCCCACTCGGTGGTGAGCTC...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | GCCAAGAAGACAGAAGCCAAGTTCTGTTGTGCAGTCTCAGCCAATGGTTTCGTTAAGCCGCTCAGCAGGTaGGGCATCCAGGAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: AKKTEAKFCCAVSANGFVKPLSR*GIQELT Trigger: GGTGAGCTCCTGGATGCCGCACCTGCTGAGCGGCTT...AACGAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | CATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGCAGTCTCAGCCAATGGTTTCAAGCCGCTCAGCAGGTaGGGCATCCAGGAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HAKKTEAKFCCAVSANGFKPLSR*GIQELT Trigger: GGTGAGCTCCTGGATGCCGCACCTGCTGAGCGGCTT...GAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTCACCACCAGGCAGTTaGCCGCGATCGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFCITSSPGFRSGSCIMTSPPGS*PRSSAA Trigger: CGCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGA...GGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATCACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGAAGCCAAGTTCTCACCACCAGGCAGTTaGCCGCGATCGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDHPLSHFSHAKKTEAKFSPPGS*PRSSAA Trigger: CGCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGA...GAACTTGGCTTCTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGGCTAGCTGTCACCTCTaGGAAGCCGCTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLFCITSSPGFRSGSCIMASCHL*EAAQQV Trigger: CACCTGCTGAGCGGCTTCCCAGAGGTGACAGCTAGC...CATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR TCA 90 bp | AATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCCACGCGTGGGAAGCCTaGGAACTTGTGTTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NAVMRHSLFSSYHSLSGAHAWEA*ELVFGC Trigger: GCAGCCAAACACAAGTTCTCAGGCTTCCCACGCGTG...GGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTAAGCCGCTCAGCAGGTaGGGCATCCAGGAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLHYFFSRVPLWIMYHDLKPLSR*GIQELT Trigger: GGTGAGCTCCTGGATGCCGCACCTGCTGAGCGGCTT...AAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTTCTGATCTGTGCCTTTCCCTCTCCTTCACCCAGACTACTACATAGTAACTCACCACCAGGCAGTTaGCCGCGATCGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLICAFPSPSPRLLHSNSPPGS*PRSSAA Trigger: CGCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGA...GTTACTATGTAGTAGTCTGGGTGAAGGAGAGGGAAAGGCACAGATCAGAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTCCACCCACAGCGGGATaGAGCTACAGGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLHYFFSRVPLWIMYHDLPPTAG*SYRRCH Trigger: GTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGG...AAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | CACTTTGTACAACAGATCACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGCCACCCACAGCGGGATaGAGCTACAGGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFVQQITPCHISAMPRRQPPTAG*SYRRCH Trigger: GTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGG...CTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | TTAATATACAATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCGAGCTCACCACCGAGTaGGCGCCACCGTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIYNAVMRHSLFSSYHSLELTTE*APPSGL Trigger: GAGCCCCGACGGTGGCGCCCACTCGGTGGTGAGCTC...GAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATTGTATATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTCCCTCAAGATACACTTTGTACAACAGATCACCCCTTGTCACATTTCACCACCAGGCAGTTaGCCGCGATCGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VAISLKIHFVQQITPCHISPPGS*PRSSAA Trigger: CGCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGA...AATGTGACAAGGGGTGATCTGTTGTACAAAGTGTATCTTGAGGGAGATGGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | CTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTTTCCACCCACAGCGGGATaGAGCTACAGGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHYFFSRVPLWIMYHDLFPPTAG*SYRRCH Trigger: GTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGG...AAAAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCTCCCCACCCACAGCGGGATaGAGCTACAGGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQECEYKEKLYSGFLPLSPPTAG*SYRRCH Trigger: GTGGCACCTCCTGTAGCTGCATCCCGCTGTGGGTGG...GGAGAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACGGCTTCGTGCATGCCTaGAGCAGAGAGCTTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLHYFFSRVPLWIMYHDGFVHA*SRELPV Trigger: AACCGGAAGCTCTCTGCTGCAGGCATGCACGAAGCC...GTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCTGAAGAGTTACCACAAAGCCTAGACGGGAAGCATGGGAATTGTGCGTTAGGCTTCGTGCATGCCTaGAGCAGAGAGCTTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPEELPQSLDGKHGNCALGFVHA*SRELPV Trigger: AACCGGAAGCTCTCTGCTGCAGGCATGCACGAAGCC...TAACGCACAATTCCCATGCTTCCCGTCTAGGCTTTGTGGTAACTCTTCAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGTCAGGGCTTCGTGCATaGCTGCAGCAGAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPCHISAMPRRQKPSSVVSGLRA*LQQRAS Trigger: GGAAGCTCTCTGCTGCAGGCATGCACGAAGCCCTGA...CACAACAGAACTTGGCTTCTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCGCTAGCTGTCACCTCTaGGAAGCCGCTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAFRSVSTRKSFIQVFCLASCHL*EAAQQV Trigger: CACCTGCTGAGCGGCTTCCCAGAGGTGACAGCTAGC...GAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTGCTAGCTGTCACCTCTaGGAAGCCGCTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHYFFSRVPLWIMYHDLASCHL*EAAQQV Trigger: CACCTGCTGAGCGGCTTCCCAGAGGTGACAGCTAGC...AAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR TCA 90 bp | CCGTGGGCTCCTTGTACCCTTGTAGAAGATGAGAGTAAACAACATGCCAAGAATCACGCGTGGGAAGCCTaGGAACTTGTGTTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWAPCTLVEDESKQHAKNHAWEA*ELVFGC Trigger: GCAGCCAAACACAAGTTCTCAGGCTTCCCACGCGTG...ATTCTTGGCATGTTGTTTACTCTCATCTTCTACAAGGGTACAAGGAGCCCACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTGTCTCAAAGCCGCTCAGCAGGTaGGGCATCCAGGAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QFAWKDTLLIDHKMNSVSKPLSR*GIQELT Trigger: GGTGAGCTCCTGGATGCCGCACCTGCTGAGCGGCTT...TGAGACAGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGCAGTCTCAGCCAATGGTTTCCTGAGAACTTGTGTTTaGCTGCGCTCTTCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HAKKTEAKFCCAVSANGFLRTCV*LRSSWR Trigger: CCGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAG...GAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTCACGCGTGGGAAGCCTaGGAACTTGTGTTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCITSSPGFRSGSCIMTFHAWEA*ELVFGC Trigger: GCAGCCAAACACAAGTTCTCAGGCTTCCCACGCGTG...AAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTCCAGTTGGATGACCATGTTTATACTGTCTCCAGAAACAACCACAATCATTCACCACCAGGCAGTTaGCCGCGATCGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVQLDDHVYTVSRNNHNHSPPGS*PRSSAA Trigger: CGCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGA...ATGATTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACTGGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | CTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTTTTCAGGGCTTCGTGCATaGCTGCAGCAGAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHYFFSRVPLWIMYHDLFSGLRA*LQQRAS Trigger: GGAAGCTCTCTGCTGCAGGCATGCACGAAGCCCTGA...AAAAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTGTCTCAGCTAGCTGTCACCTCTaGGAAGCCGCTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFAWKDTLLIDHKMNSVSASCHL*EAAQQV Trigger: CACCTGCTGAGCGGCTTCCCAGAGGTGACAGCTAGC...TGAGACAGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCCCCAAGGTAGTGGCTaGTTTCTGTTCCCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPPVLHYFFSRVPLWIMYPQGSG*FLFPLE Trigger: TTCAAGAGGGAACAGAAAGCAGCCACTACCTTGGGG...ATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | CTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTTTCTGAGAACTTGTGTTTaGCTGCGCTCTTCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHYFFSRVPLWIMYHDLFLRTCV*LRSSWR Trigger: CCGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAG...AAAAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGTTGATATTCCGGTACTaGCACTGGAGTAGGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: PLFCITSSPGFRSGSCIMLIFRY*HWSRLR Trigger: TCGTAGCCTACTCCAGTGCCAGTACCGGAATATCAA...CATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| 3UTR CAA 72 bp | TTTCAGCCATGCCAAGAAGACAGAAGCCAAGTTCTGTaGTGCAGTCTCAGCCAATGGTTTCGTTGTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQPCQEDRSQVL*CSLSQWFRCFP Trigger: GGGGAAACAACGAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGCATGGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTGTCTCATGAATGGCTTCGTGCATGCCTaGAGCAGAGAGCTTCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLERHPSDRPQNELCLMNGFVHA*SRELPV Trigger: AACCGGAAGCTCTCTGCTGCAGGCATGCACGAAGCC...ATTCATGAGACAGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGAGTTACACCATAATGATAAAGGATTTAACGGTGGACATACACTGGTGGTCAGGGCTTCGTGCATaGCTGCAGCAGAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSYTIMIKDLTVDIHWWSGLRA*LQQRAS Trigger: GGAAGCTCTCTGCTGCAGGCATGCACGAAGCCCTGA...CCACCAGTGTATGTCCACCGTTAAATCCTTTATCATTATGGTGTAACTCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGGAAGAAGTCCATAATCCTGAGAACTTGTGTTTaGCTGCGCTCTTCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPALIINISDIWKKSIILRTCV*LRSSWR Trigger: CCGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAG...GATTATGGACTTCTTCCAGATGTCACTGATGTTTATTATGAGAGCAGGACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTCCCCAAGGTAGTGGCTaGTTTCTGTTCCCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FCITSSPGFRSGSCIMTFPQGSG*FLFPLE Trigger: TTCAAGAGGGAACAGAAAGCAGCCACTACCTTGGGG...AAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTTCAGGAGTGTGAGTACAAGGAAAAGCTTTATTCAGGTTTTCTGCCTCTCCCCCAAGGTAGTGGCTaGTTTCTGTTCCCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLQECEYKEKLYSGFLPLPQGSG*FLFPLE Trigger: TTCAAGAGGGAACAGAAAGCAGCCACTACCTTGGGG...GAGAGGCAGAAAACCTGAATAAAGCTTTTCCTTGTACTCACACTCCTGAAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | ATACACTTTGTACAACAGATCACCCCTTGTCACATTTCAGCCATGCCAAGAAGAACTCTTCCACCTCCTTaGCACTGCGGTGGAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IHFVQQITPCHISAMPRRTLPPP*HCGGVD Trigger: ATCTACTCCACCGCAGTGGCAAGGAGGTGGAAGAGT...TCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170360.2 |
||
| CDS-3UTR CCA 90 bp | CTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTTTTCTTCCACCTCCTTCTaGAGTTTCACCACGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LHYFFSRVPLWIMYHDLFSSTSF*SFTTPF Trigger: GAATGGCGTGGTGAAACTCCAGAAGGAGGTGGAAGA...AAAAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| 3UTR CAA 72 bp | CTCCCTCAAGATACACTTTGTACAACAGATCACCCCTaGTCACATTTCAGCCATGCCAAGAAGACAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPQDTLCTTDHP*SHFSHAKKTEA Trigger: GGCTTCTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTGTATCTTGAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTGATATAAAACGCCACTaGGGTGGAGTAGATCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLHYFFSRVPLWIMYHDLDIKRH*GGVDRV Trigger: TACACGATCTACTCCACCGCAGTGGCGTTTTATATC...AAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGTACAACAGATCACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGAAGATATAAAACGCCACTaGGGTGGAGTAGATCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCTTDHPLSHFSHAKKTEDIKRH*GGVDRV Trigger: TACACGATCTACTCCACCGCAGTGGCGTTTTATATC...TTCTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGTTGTACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | TTACTGCAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTTCTTCCACCTCCTTCTaGAGTTTCACCACGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQFAWKDTLLIDHKMNSSSTSF*SFTTPF Trigger: GAATGGCGTGGTGAAACTCCAGAAGGAGGTGGAAGA...AGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
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| CDS-3UTR GCA 90 bp | CCTGCTCTCATAATAAACATCAGTGACATCTGGAAGAAGTCCATAATCCACTTTCCCCAAGGTAGTGGCTaGTTTCTGTTCCCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PALIINISDIWKKSIIHFPQGSG*FLFPLE Trigger: TTCAAGAGGGAACAGAAAGCAGCCACTACCTTGGGG...AAAGTGGATTATGGACTTCTTCCAGATGTCACTGATGTTTATTATGAGAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCCTTATCTGTCCTTAACTTTGACCATTTTTATTGGTGGGAGGGAGTTATCTTCCACCTCCTTCTaGAGTTTCACCACGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFPYLSLTLTIFIGGRELSSTSF*SFTTPF Trigger: GAATGGCGTGGTGAAACTCCAGAAGGAGGTGGAAGA...TAACTCCCTCCCACCAATAAAAATGGTCAAAGTTAAGGACAGATAAGGAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| 3UTR CAA 72 bp | CTCCAGAAACAACCACAATCATTCATGGATATGCTATaGCCACACTCCCTGCTCATAACACACCATTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKQPQSFMDML*PHSLLITHHYG Trigger: TCCATAATGGTGTGTTATGAGCAGGGAGTGTGGCAATAGCATATCCATGAATGATTGTGGTTGTTTCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
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| CDS-3UTR TCA 90 bp | TTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTCTTTCTGTTCCCTCTTaGAGATGGAAATGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCITSSPGFRSGSCIMTFLSVPS*RWKCFS Trigger: GGAAAAACATTTCCATCTTCAAGAGGGAACAGAAAG...AAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR TCA 90 bp | GCCATCTCCCTCAAGATACACTTTGTACAACAGATCACCCCTTGTCACATTTCACTTTCTGTTCCCTCTTaGAGATGGAAATGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AISLKIHFVQQITPCHISLSVPS*RWKCFS Trigger: GGAAAAACATTTCCATCTTCAAGAGGGAACAGAAAG...TGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTGTATCTTGAGGGAGATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR GCA 90 bp | TTACTGCAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTGATATAAAACGCCACTaGGGTGGAGTAGATCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLQFAWKDTLLIDHKMNSDIKRH*GGVDRV Trigger: TACACGATCTACTCCACCGCAGTGGCGTTTTATATC...AGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTCACAGTTTTGTCAGTaGAACAGAATTCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLHYFFSRVPLWIMYHDLSQFCQ*NRIHSF Trigger: AAAGCTGTGAATTCTGTTGCACTGACAAAACTGTGA...AAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099505.4 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCCTTATCTGTCCTTAACTTTGACCATTTTTATTGGTGGGAGGGAGTTATTGATATTCCGGTACTaGCACTGGAGTAGGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPYLSLTLTIFIGGRELLIFRY*HWSRLR Trigger: TCGTAGCCTACTCCAGTGCCAGTACCGGAATATCAA...TAACTCCCTCCCACCAATAAAAATGGTCAAAGTTAAGGACAGATAAGGAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAACCCAGCGCTGTAGTGTGCTTACCGCAGAGATGACTGGCTGTCTGACAATCACCACCAGGCAGTaGCCCGCGATCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRTQRCSVLTAEMTGCLTITTRQ*PAIVSS Trigger: GCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGAT...TGTCAGACAGCCAGTCATCTCTGCGGTAAGCACACTACAGCGCTGGGTTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGATCACCACCAGGCAGTaGCCCGCGATCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLFCITSSPGFRSGSCIMITTRQ*PAIVSS Trigger: GCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGAT...CATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CAA 90 bp | AATGCAGTGATGCGGCATTCACTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCATCACCACCAGGCAGTaGCCCGCGATCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NAVMRHSLFSSYHSLSGAITTRQ*PAIVSS Trigger: GCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGAT...GGCTCCTGAGAGAGAATGGTAACTGGAGAAGAGTGAATGCCGCATCACTGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTTCCCCCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATATCACCACCAGGCAGTaGCCCGCGATCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVSPCSALLLLQGSALDHITTRQ*PAIVSS Trigger: GCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGAT...ATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAACAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCCTGAGAACTTGTGTTaGGCTGCGCTCTTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PVLHYFFSRVPLWIMYHDPENLC*AALFLA Trigger: CGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAGG...GTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGCAGTCTCAGCCAATGGTTTCCACTCTTCCACCTCCTaGCCACTGCGGTGGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HAKKTEAKFCCAVSANGFHSSTS*PLRWSR Trigger: TCTACTCCACCGCAGTGGCAAGGAGGTGGAAGAGTG...GAAACCATTGGCTGAGACTGCACAACAGAACTTGGCTTCTGTCTTCTTGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170360.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTCCAGTTACCATTCTCTCTCAGGAGCCTTCAGGAGTGTGAGTACAAGGATGGCGATGAAGACGTaGCAGAAGAAGTGGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFSSYHSLSGAFRSVSTRMAMKT*QKKWPK Trigger: CTTCGGCCACTTCTTCTGCAACGTCTTCATCGCCAT...CCTTGTACTCACACTCCTGAAGGCTCCTGAGAGAGAATGGTAACTGGAGAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CAA 90 bp | CACTTTGTACAACAGATCACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGCCTGAGAACTTGTGTTaGGCTGCGCTCTTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HFVQQITPCHISAMPRRQPENLC*AALFLA Trigger: CGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAGG...CTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCAGTTGGATGACCATGTTTATACTGTCTCCAGAAACAACCACAATCATATCACCACCAGGCAGTaGCCCGCGATCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVQLDDHVYTVSRNNHNHITTRQ*PAIVSS Trigger: GCTGCTGACGATCGCGGGCAACTGCCTGGTGGTGAT...ATGATTGTGGTTGTTTCTGGAGACAGTATAAACATGGTCATCCAACTGGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACATGGCGATGAAGACGTaGCAGAAGAAGTGGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: PVLHYFFSRVPLWIMYHDMAMKT*QKKWPK Trigger: CTTCGGCCACTTCTTCTGCAACGTCTTCATCGCCAT...GTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | GTTCCTGAAGAGTTACCACAAAGCCTAGACGGGAAGCATGGGAATTGTGCGTTAATGGCGATGAAGACGTaGCAGAAGAAGTGGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: VPEELPQSLDGKHGNCALMAMKT*QKKWPK Trigger: CTTCGGCCACTTCTTCTGCAACGTCTTCATCGCCAT...TAACGCACAATTCCCATGCTTCCCGTCTAGGCTTTGTGGTAACTCTTCAGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTGTCTCCCTGAGAACTTGTGTTaGGCTGCGCTCTTCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: AVCLERHPSDRPQNELCLPENLC*AALFLA Trigger: CGCCAGGAAGAGCGCAGCCAAACACAAGTTCTCAGG...GAGACAGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 |
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| CDS-3UTR CAA 90 bp | GTTCTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTATGGCGATGAAGACGTaGCAGAAGAAGTGGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: VLHYFFSRVPLWIMYHDLMAMKT*QKKWPK Trigger: CTTCGGCCACTTCTTCTGCAACGTCTTCATCGCCAT...AAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099505.4 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | ATACACTTTGTACAACAGATCACCCCTTGTCACATTTCAGCCATGCCAAGAAGAATGGCGATGAAGACGTaGCAGAAGAAGTGGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: IHFVQQITPCHISAMPRRMAMKT*QKKWPK Trigger: CTTCGGCCACTTCTTCTGCAACGTCTTCATCGCCAT...TCTTCTTGGCATGGCTGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000164639.8 ENSMUST00000164781.2 ENSMUST00000165215.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | ACCCCTTGTCACATTTCAGCCATGCCAAGAAGACAGAAGCCAAGTTCTGTTGTGACCGACAGAATCATTTaGGCCATACATTTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: TPCHISAMPRRQKPSSVVTDRII*AIHFPF Trigger: GAATGGGAAATGTATGGCCAAAATGATTCTGTCGGT...CACAACAGAACTTGGCTTCTGTCTTCTTGGCATGGCTGAAATGTGACAAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | CTGCATTACTTCTTCTCCAGGGTTCCGCTCTGGATCATGTATCATGACCTTTTTACCGACAGAATCATTTaGGCCATACATTTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LHYFFSRVPLWIMYHDLFTDRII*AIHFPF Trigger: GAATGGGAAATGTATGGCCAAAATGATTCTGTCGGT...AAAAAGGTCATGATACATGATCCAGAGCGGAACCCTGGAGAAGAAGTAATGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099505.4 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | GCCATCTCCCTCAAGATACACTTTGTACAACAGATCACCCCTTGTCACATTTCAACCGACAGAATCATTTaGGCCATACATTTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: AISLKIHFVQQITPCHISTDRII*AIHFPF Trigger: GAATGGGAAATGTATGGCCAAAATGATTCTGTCGGT...TGAAATGTGACAAGGGGTGATCTGTTGTACAAAGTGTATCTTGAGGGAGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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| CDS-3UTR CAA 90 bp | TTACTGCAGTTTGCTTGGAAAGACACCCTTCTGATAGACCACAAAATGAACTCTACCGACAGAATCATTTaGGCCATACATTTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LLQFAWKDTLLIDHKMNSTDRII*AIHFPF Trigger: GAATGGGAAATGTATGGCCAAAATGATTCTGTCGGT...AGAGTTCATTTTGTGGTCTATCAGAAGGGTGTCTTTCCAAGCAAACTGCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164639.8 ENSMUST00000166074.2 ENSMUST00000170360.2 |
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