Pregenerated sensors for HTR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026322Ensembl transcript IDs: ENSMUST00000027560.8, ENSMUST00000236691.2, ENSMUST00000237114.2, ENSMUST00000238081.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCTGCTGGATTCCTGGCGGGAAAGTCCAGTGCGGATTGCCTCATaGTCTTGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: RLLDSWRESPVRIAS*SWKALEKRVPGPAT Trigger: TGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR GCA 90 bp | GGAAGGAGGAAGCCCTTCTCTCCCCTGACTTCCTCAAATACCGCCTaGTGGATTCCTGGCGGGAAAGTCCAGTGCGGATTGCCTCATGCT | + |
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Preference number: 1 (lower is better) Translates to: GRRKPFSPLTSSNTA*WIPGGKVQCGLPHA Trigger: AGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGTCAGGGGAGAGAAGGGCTTCCTCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR GCA 90 bp | CCAGCTTTCAATTCCATCCACTCAGCCAGTCCATCATTGACTCAGTaGCTGAGCCACTCACCCACCACCATGTTCGTTGACGGGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PAFNSIHSASPSLTQ*LSHSPTTMFVDGVG Trigger: GCCCACCCCGTCAACGAACATGGTGGTGGGTGAGTGGCTCAGGCACTGAGTCAATGATGGACTGGCTGAGTGGATGGAATTGAAAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR GCA 90 bp | AGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTaGTGTGAGGTGACACCGACTCTCCCACTGGCCACCACATTCCAC | + |
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Preference number: 1 (lower is better) Translates to: RGLSITGLSSHQRRS*CEVTPTLPLATTFH Trigger: GTGGAATGTGGTGGCCAGTGGGAGAGTCGGTGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| 3UTR CCA 90 bp | CTGGATTCCTGGCGGGAAAGTCCAGTGCGGATTGCCTCATGCTCTTaGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACACA | + |
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Preference number: 1 (lower is better) Translates to: LDSWRESPVRIASCS*KALEKRVPGPATYT Trigger: TGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR GCA 90 bp | ACTTCCTCAAATACCGCCTGCTGGATTCCTGGCGGGAAAGTCCAGTaGGGATTGCCTCATGCTCTTGGAAAGCCTTGGAGAAGAGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: TSSNTACWIPGGKVQ*GLPHALGKPWRREC Trigger: GCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | GGAATCAAACCACAGTCAAGGCGAAAGCTGAACCTCACCTGGCTCTaGGAAGTGGTGCTTCCATCACCAGAGCCTTTGCTCTCGGGTAGT | + |
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Preference number: 1 (lower is better) Translates to: GIKPQSRRKLNLTWL*EVVLPSPEPLLSGS Trigger: ACTACCCGAGAGCAAAGGCTCTGGTGATGGAAGCACCACTTCTCAGAGCCAGGTGAGGTTCAGCTTTCGCCTTGACTGTGGTTTGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | CAGAGACCACCAAGCAAGAGTGGAGACTCCAGGAAGAAGAACTCTTaGGAAACAGAAAGCGAAGGGAAGGAGGAAGCCCTTCTCTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: QRPPSKSGDSRKKNS*ETESEGKEEALLSP Trigger: AGGGGAGAGAAGGGCTTCCTCCTTCCCTTCGCTTTCTGTTTCTCAAGAGTTCTTCTTCCTGGAGTCTCCACTCTTGCTTGGTGGTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR GCA 90 bp | CTCTCAGATGAGATAGATCTGGTCCTGACTTCCTTCCAGGGTTTCTaGAGAGACCGTTTCCCACTGACGGATCTCTCTTCTGTGTCTCCG | + |
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Preference number: 1 (lower is better) Translates to: LSDEIDLVLTSFQGF*RDRFPLTDLSSVSP Trigger: CGGAGACACAGAAGAGAGATCCGTCAGTGGGAAACGGTCTCTGCAGAAACCCTGGAAGGAAGTCAGGACCAGATCTATCTCATCTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CCA 90 bp | TTCCACGAGAAGCTCAAGAGAACGGTGCAGTGCATAGTCCTGAGGTaGAATCAAACCACAGTCAAGGCGAAAGCTGAACCTCACCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: FHEKLKRTVQCIVLR*NQTTVKAKAEPHLA Trigger: AGCCAGGTGAGGTTCAGCTTTCGCCTTGACTGTGGTTTGATTCCACCTCAGGACTATGCACTGCACCGTTCTCTTGAGCTTCTCGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | AGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTaGTGGCCACTGTGCAAAACTGTATACACAGCCTTGCAGAGCACG | + |
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Preference number: 1 (lower is better) Translates to: RDSGSLCMGNFSSSW*WPLCKTVYTALQST Trigger: CGTGCTCTGCAAGGCTGTGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| 3UTR CCA 90 bp | CCGTTTCCCACTGACGGATCTCTCTTCTGTGTCTCCGACTGCAAATaGATGGAGCCTGTCCTGAAGAGAATGGTACCACTAAACACAGGA | + |
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Preference number: 1 (lower is better) Translates to: PFPTDGSLFCVSDCK*MEPVLKRMVPLNTG Trigger: TCCTGTGTTTAGTGGTACCATTCTCTTCAGGACAGGCTCCATCCATTTGCAGTCGGAGACACAGAAGAGAGATCCGTCAGTGGGAAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | CAGCCCTGCCTAAGGCTCTTTAGGTGTGCTAAGCTGAAAGGAAAGTaGAATCTCTCAGATGAGATAGATCTGGTCCTGACTTCCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: QPCLRLFRCAKLKGK*NLSDEIDLVLTSFQ Trigger: CTGGAAGGAAGTCAGGACCAGATCTATCTCATCTGAGAGATTTCACTTTCCTTTCAGCTTAGCACACCTAAAGAGCCTTAGGCAGGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | GAGCATCCATCAGTAAGGTCCACTGGAAGCAGCAAAGCCATACTCTaGGGTTTTGAGCTGCTACTGTGTGTTTCACCACAAGCTCATAGA | + |
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Preference number: 1 (lower is better) Translates to: EHPSVRSTGSSKAIL*GFELLLCVSPQAHR Trigger: TCTATGAGCTTGTGGTGAAACACACAGTAGCAGCTCAAAACCTCAGAGTATGGCTTTGCTGCTTCCAGTGGACCTTACTGATGGATGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | GGGGATGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATaGTTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GDGWLNGKPCLQSKA*FQRLRVIVYGQFLQ Trigger: CTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| 3UTR GCA 90 bp | TCGGCTTTGAGTGAAAGACACCAGGTTCACTGTGTTTCACCAGTTTaGACAGATGATCAAGTCAGAAGTCTAGCATGCCCAAATCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SALSERHQVHCVSPV*TDDQVRSLACPNQE Trigger: CTCCTGATTTGGGCATGCTAGACTTCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTCACTCAAAGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CCA 90 bp | TCTTCAATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATaGGCAATTTCTCCAGTTCCTGGTGATGGCCACTGTGCAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: SSIKSMIPETPGHCV*AISPVPGDGHCAKL Trigger: CAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| 3UTR TCA 90 bp | GACGAGAAGAGGCCTCCAGTGAGAACTGCTCCATTGGATCAGTTTTaGCACGAACCATCTCAGCATCAATATTTCTTAGCACAGAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: DEKRPPVRTAPLDQF*HEPSQHQYFLAQSF Trigger: AAAGCTCTGTGCTAAGAAATATTGATGCTGAGATGGTTCGTGTCAAAACTGATCCAATGGAGCAGTTCTCACTGGAGGCCTCTTCTCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 90 bp | AATTTCTCTCCACATCAACTGTTTCAGAGTACTCAGAAGTGTTCCTaGGGCTCACACCATCCAGCTTTCAATTCCATCCACTCAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: NFSPHQLFQSTQKCS*GSHHPAFNSIHSAS Trigger: ACTGGCTGAGTGGATGGAATTGAAAGCTGGATGGTGTGAGCCTCAGGAACACTTCTGAGTACTCTGAAACAGTTGATGTGGAGAGAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CCA 90 bp | ACCAATGAGAAGCAATTAATAAGGAATGAGTACCCAGGGGCATGTTaGTACCCAAGGGTTGCTCTGGGTTTTGTTTCCAACACAGAAACC | + |
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Preference number: 1 (lower is better) Translates to: TNEKQLIRNEYPGAC*YPRVALGFVSNTET Trigger: GGTTTCTGTGTTGGAAACAAAACCCAGAGCAACCCTTGGGTACCAACATGCCCCTGGGTACTCATTCCTTATTAATTGCTTCTCATTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CCA 90 bp | CTGCTCCAAGTTAAATTTGGCAATGTAGAGAGTGAAATTCATAGATaGAAAGACATTGTTCATGGTCTCACAGCGTTTCAGAAGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LLQVKFGNVESEIHR*KDIVHGLTAFQKQG Trigger: GCCCTGCTTCTGAAACGCTGTGAGACCATGAACAATGTCTTTCCATCTATGAATTTCACTCTCTACATTGCCAAATTTAACTTGGAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CAA 90 bp | GCTGGATTCCTGGCGGGAAAGTCCAGTGCGGATTGCCTCATGCTCTaGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACAC | + |
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Preference number: 2 (lower is better) Translates to: AGFLAGKSSADCLML*ESLGEESARASHIH Trigger: GTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATCCACTCAGCCAGTCCATCATTGACTCAGTGCCTGAGCCACTCACCCACCAGCCCTTCTCTCCCCTaGCTTCCTCAAATACCGCCT | + |
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Preference number: 2 (lower is better) Translates to: SIHSASPSLTQCLSHSPTSPSLP*LPQIPP Trigger: AGGCGGTATTTGAGGAAGTCAGGGGAGAGAAGGGCT...GGTGGGTGAGTGGCTCAGGCACTGAGTCAATGATGGACTGGCTGAGTGGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGACTTCCTCAAATACCGCCTGCTGGATTCCTGGCGGGAAAGTCCAGTGCCTTGGAGAAGAGAGTaGCAGGGCCAGCCACATACA | + |
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Preference number: 2 (lower is better) Translates to: SPDFLKYRLLDSWRESPVPWRRE*QGQPHT Trigger: TGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGG...CACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGTCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACTGGCTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCAAGGAGAAGTTGCTGTaGGGTGACACCGACTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RTGFVSSHSCLLGHCPRGKEKLL*GDTDSP Trigger: GGGAGAGTCGGTGTCACCTCACAGCAACTTCTCCTT...GCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAGCCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGCGTTTCAGAAGCAGGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGGCTCTTGGAAAGCCTTaGAGAAGAGAGTGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LTAFQKQGLGLHLGPLTWALGKP*RRECQG Trigger: GCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGC...CCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTCTGAAACGCTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | CTCACAGCGTTTCAGAAGCAGGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGTCCTTCCAGGGTTTCTaGAGAGACCGTTTCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LTAFQKQGLGLHLGPLTWSFQGF*RDRFPL Trigger: CAGTGGGAAACGGTCTCTGCAGAAACCCTGGAAGGA...CCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTCTGAAACGCTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGCTCTTGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACAAAGTCCAGTGCGGATTaGCTCATGCTCTTGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: PHALGKPWRRECQGQPHTKSSAD*LMLLES Trigger: GCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTT...TGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACTGGCTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCCACCAAAGGAGAAGTTaGTGTGAGGTGACACCGACT | + |
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Preference number: 2 (lower is better) Translates to: RTGFVSSHSCLLGHCPRGHQRRS*CEVTPT Trigger: AGTCGGTGTCACCTCACAGCAACTTCTCCTTTGGTG...GCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAGCCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| 3UTR CAA 90 bp | TCAGAGACCACCAAGCAAGAGTGGAGACTCCAGGAAGAAGAACTCTaGAGAAACAGAAAGCGAAGGGAAGGAGGAAGCCCTTCTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SETTKQEWRLQEEEL*RNRKRREGGSPSLP Trigger: GGGGAGAGAAGGGCTTCCTCCTTCCCTTCGCTTTCTGTTTCTCAAGAGTTCTTCTTCCTGGAGTCTCCACTCTTGCTTGGTGGTCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CAA 90 bp | TCACACCATCCAGCTTTCAATTCCATCCACTCAGCCAGTCCATCATaGACTCAGTGCCTGAGCCACTCACCCACCACCATGTTCGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: SHHPAFNSIHSASPS*TQCLSHSPTTMFVD Trigger: GTCAACGAACATGGTGGTGGGTGAGTGGCTCAGGCACTGAGTCAATGATGGACTGGCTGAGTGGATGGAATTGAAAGCTGGATGGTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGAGCCAGATTCTGTTTTCTCATCTGAGGTTTTGAGCTaGTACTGTGTGTTTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: GPGLTFGSSDLEPDSVFSSEVLS*YCVFHH Trigger: GTGGTGAAACACACAGTAGCAGCTCAAAACCTCAGA...TGAGAAAACAGAATCTGGCTCCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATGTCTTCAATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGTTCTCCAGTTCCTGGTaGTGGCCACTGTGCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: AMSSIKSMIPETPGHCVWFSSSW*WPLCKT Trigger: AGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAA...CCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGACATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGACACCAGGTTCACTGTGTTTCACCAGTTTGCACAGATGATCAAGTCAGAACAAAGGAAAGAAAGTaGACAAGGGCCCAGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ERHQVHCVSPVCTDDQVRTKERK*TRAQQR Trigger: TCTCTGCTGGGCCCTTGTTCACTTTCTTTCCTTTGT...TCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CAA 90 bp | CTAAACACAGGAAAAAGAAAACAGAGTTCTGTGGCTGACACAGGGTaGGCCAAGAGGATACATGTCTATACCCAGACAAAGGAAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LNTGKRKQSSVADTG*AKRIHVYTQTKERK Trigger: CTTTCTTTCCTTTGTCTGGGTATAGACATGTATCCTCTTGGCCAACCCTGTGTCAGCCACAGAACTCTGTTTTCTTTTTCCTGTGTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGACACCAGGTTCACTGTGTTTCACCAGTTTGCACAGATGATCAAGTCAGAACAGTATCTGTAAGATaGCACTTCAAAGAAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: ERHQVHCVSPVCTDDQVRTVSVR*HFKEGM Trigger: CATGCCTTCTTTGAAGTGTCATCTTACAGATACTGT...TCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGCTCATAGAAGAGTCTGAGCATCTCTTAATAGATGCATGTGATGAACCAATTGCCTCATGCTCTTaGAAAGCCTTGGAGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HKLIEESEHLLIDACDEPIASCS*KALEKR Trigger: TCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAAT...TGGTTCATCACATGCATCTATTAAGAGATGCTCAGACTCTTCTATGAGCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTAGTGAAATCTCTCAGATaGGATAGATCTGGTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: CFMFSTAGTHVLTGLIILVKSLR*DRSGPD Trigger: GTCAGGACCAGATCTATCTCATCTGAGAGATTTCAC...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGACACCAGGTTCACTGTGTTTCACCAGTTTGCACAGATGATCAAGTCAGAAAGCTGAAAGGAAAGTaGAATCTCTCAGATGAGATA | + |
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Preference number: 2 (lower is better) Translates to: ERHQVHCVSPVCTDDQVRKLKGK*NLSDEI Trigger: TATCTCATCTGAGAGATTTCACTTTCCTTTCAGCTT...TCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTACTTCAAAACACTGCTTaGCTCCAAATGAGTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: CFMFSTAGTHVLTGLIILLQNTA*LQMSAE Trigger: CTCAGCACTCATTTGGAGGCAAGCAGTGTTTTGAAG...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTATGCATAGTCCTGAGGTaGAATCAAACCACAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: CFMFSTAGTHVLTGLIILCIVLR*NQTTVK Trigger: CTTGACTGTGGTTTGATTCCACCTCAGGACTATGCA...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTATTAGGTGTGCTAAGCTaGAAGGAAAGTGAAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: CFMFSTAGTHVLTGLIILLGVLS*KESEIS Trigger: AGAGATTTCACTTTCCTTTCAGCTTAGCACACCTAA...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTACCAAAGTCTATTTCCTaGCAAGTTCAGTTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: CFMFSTAGTHVLTGLIILPKSIS*QVQFQN Trigger: ATTCTGGAACTGAACTTGGCAGGAAATAGACTTTGG...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CCA 72 bp | TGGCGGGAAAGTCCAGTGCGGATTGCCTCATGCTCTTaGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: WRESPVRIASCS*KALEKRVPGPA Trigger: GGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR TCA 72 bp | TCAGTGCCTGAGCCACTCACCCACCACCATGTTCGTTaGCGGGGTGGGCATATGGTCAGTCGAGGCAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: SVPEPLTHHHVR*RGGHMVSRGKL Trigger: CAACTTGCCTCGACTGACCATATGCCCACCCCGTCAACGAACATGGTGGTGGGTGAGTGGCTCAGGCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR GCA 72 bp | AGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTaGTGTGAGGTGACACCGACTCTCCCACTGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: SITGLSSHQRRS*CEVTPTLPLAT Trigger: GGTGGCCAGTGGGAGAGTCGGTGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| 3UTR CCA 72 bp | CCCTTCTCTCCCCTGACTTCCTCAAATACCGCCTGCTaGATTCCTGGCGGGAAAGTCCAGTGCGGATTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PFSPLTSSNTAC*IPGGKVQCGLP Trigger: AGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGTCAGGGGAGAGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | AAGCCCTTCTCTCCCCTGACTTCCTCAAATACCGCCTaGTGGATTCCTGGCGGGAAAGTCCAGTGCGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: KPFSPLTSSNTA*WIPGGKVQCGL Trigger: CAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGTCAGGGGAGAGAAGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | GTCCAGTGCGGATTGCCTCATGCTCTTGGAAAGCCTTaGAGAAGAGAGTGCCAGGGCCAGCCACATACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VQCGLPHALGKP*RRECQGQPHTH Trigger: GTGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | TCCCCTGACTTCCTCAAATACCGCCTGCTGGATTCCTaGCGGGAAAGTCCAGTGCGGATTGCCTCATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPDFLKYRLLDS*RESPVRIASCS Trigger: AGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGTCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | CCTGCTGGATTCCTGGCGGGAAAGTCCAGTGCGGATTaGCTCATGCTCTTGGAAAGCCTTGGAGAAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PAGFLAGKSSAD*LMLLESLGEES Trigger: ACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | AATACCGCCTGCTGGATTCCTGGCGGGAAAGTCCAGTaGGGATTGCCTCATGCTCTTGGAAAGCCTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NTACWIPGGKVQ*GLPHALGKPWR Trigger: TCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CTTCCTTCCAGGGTTTCTGCAGAGACCGTTTCCCACTaGCGGATCTCTCTTCTGTGTCTCCGACTGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: LPSRVSAETVSH*RISLLCLRLQM Trigger: CATTTGCAGTCGGAGACACAGAAGAGAGATCCGTCAGTGGGAAACGGTCTCTGCAGAAACCCTGGAAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CCTGAGGTGGAATCAAACCACAGTCAAGGCGAAAGCTaGACCTCACCTGGCTCTGAGAAGTGGTGCTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PEVESNHSQGES*TSPGSEKWCFH Trigger: ATGGAAGCACCACTTCTCAGAGCCAGGTGAGGTTCAGCTTTCGCCTTGACTGTGGTTTGATTCCACCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | AATTCCATCCACTCAGCCAGTCCATCATTGACTCAGTaGCTGAGCCACTCACCCACCACCATGTTCGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NSIHSASPSLTQ*LSHSPTTMFVD Trigger: GTCAACGAACATGGTGGTGGGTGAGTGGCTCAGGCACTGAGTCAATGATGGACTGGCTGAGTGGATGGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACAAGGCTCCACAAGGTGAGCATCCATCAGTAAGGTCCACTGGAAGCAGCGATTGCCTCATGCTCTaGGAAAGCCTTGGAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SDKAPQGEHPSVRSTGSSDCLML*ESLGEE Trigger: CTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATC...GCTGCTTCCAGTGGACCTTACTGATGGATGCTCACCTTGTGGAGCCTTGTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | GAGATAGATCTGGTCCTGACTTCCTTCCAGGGTTTCTaGAGAGACCGTTTCCCACTGACGGATCTCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EIDLVLTSFQGF*RDRFPLTDLSS Trigger: AGAAGAGAGATCCGTCAGTGGGAAACGGTCTCTGCAGAAACCCTGGAAGGAAGTCAGGACCAGATCTATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | GTGCCATTCCACGAGAAGCTCAAGAGAACGGTGCAGTaGATAGTCCTGAGGTGGAATCAAACCACAGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPFHEKLKRTVQ*IVLRWNQTTVK Trigger: CTTGACTGTGGTTTGATTCCACCTCAGGACTATGCACTGCACCGTTCTCTTGAGCTTCTCGTGGAATGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CCAAGCAAGAGTGGAGACTCCAGGAAGAAGAACTCTTaGGAAACAGAAAGCGAAGGGAAGGAGGAAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PSKSGDSRKKNS*ETESEGKEEAL Trigger: AAGGGCTTCCTCCTTCCCTTCGCTTTCTGTTTCTCAAGAGTTCTTCTTCCTGGAGTCTCCACTCTTGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | GAAACAAAGCCAACAGGTAGGCAGGCCATGAGCTTTTaGGGTAGCAGATGGCAGGCTATAGCAGCATCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ETKPTGRQAMSF*GSRWQAIAASY Trigger: ATAGGATGCTGCTATAGCCTGCCATCTGCTACCTCAAAAGCTCATGGCCTGCCTACCTGTTGGCTTTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | TTTCCCACTGACGGATCTCTCTTCTGTGTCTCCGACTaGAAATGGATGGAGCCTGTCCTGAAGAGAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FPTDGSLFCVSD*KWMEPVLKRMV Trigger: TACCATTCTCTTCAGGACAGGCTCCATCCATTTGCAGTCGGAGACACAGAAGAGAGATCCGTCAGTGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | ACTGACGGATCTCTCTTCTGTGTCTCCGACTGCAAATaGATGGAGCCTGTCCTGAAGAGAATGGTACCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TDGSLFCVSDCK*MEPVLKRMVPL Trigger: TAGTGGTACCATTCTCTTCAGGACAGGCTCCATCCATTTGCAGTCGGAGACACAGAAGAGAGATCCGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | TTCAGAAGCAGGGCCTGGGCTTACATTTGGGTCCTCTaGCTTGGAGCCAGATTCTGTTTTCTCATTACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: FRSRAWAYIWVL*LGARFCFLITS Trigger: GCTAGTAATGAGAAAACAGAATCTGGCTCCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | GGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTaGTGGCCACTGTGCAAAACTGTATACACAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSLCMGNFSSSW*WPLCKTVYTAL Trigger: CAAGGCTGTGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| 3UTR CCA 72 bp | AGTACCCAGGGGCATGTTGGTACCCAAGGGTTGCTCTaGGTTTTGTTTCCAACACAGAAACCTCACTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: STQGHVGTQGLL*VLFPTQKPHSK Trigger: TTTAGAGTGAGGTTTCTGTGTTGGAAACAAAACCCAGAGCAACCCTTGGGTACCAACATGCCCCTGGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | AAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATaGGCAATTTCTCCAGTTCCTGGTGATGGCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KSMIPETPGHCV*AISPVPGDGHC Trigger: ACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| 3UTR TCA 72 bp | TCAGTAAGGTCCACTGGAAGCAGCAAAGCCATACTCTaGGGTTTTGAGCTGCTACTGTGTGTTTCACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SVRSTGSSKAIL*GFELLLCVSPQ Trigger: TTGTGGTGAAACACACAGTAGCAGCTCAAAACCTCAGAGTATGGCTTTGCTGCTTCCAGTGGACCTTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CGGGTAGTTGAGACAAACTATGGACTCGGCTTTGAGTaGAAGACACCAGGTTCACTGTGTTTCACCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RVVETNYGLGFE*KTPGSLCFTSL Trigger: CAAACTGGTGAAACACAGTGAACCTGGTGTCTTTCACTCAAAGCCGAGTCCATAGTTTGTCTCAACTACCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CCACATCAACTGTTTCAGAGTACTCAGAAGTGTTCCTaGGGCTCACACCATCCAGCTTTCAATTCCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PHQLFQSTQKCS*GSHHPAFNSIH Trigger: GTGGATGGAATTGAAAGCTGGATGGTGTGAGCCTCAGGAACACTTCTGAGTACTCTGAAACAGTTGATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | TCCAGAATGAAAGTCAATGCTGACAGGAATAGCAAGTaGCATTCCACGAGAAGCTCAAGAGAACGGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRMKVNADRNSK*HSTRSSRERCS Trigger: ACTGCACCGTTCTCTTGAGCTTCTCGTGGAATGGCACTTGCTATTCCTGTCAGCATTGACTTTCATTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | GTTGACGGGGTGGGCATATGGTCAGTCGAGGCAAGTTaGTTGCATCTCATCTCTTGTATTAAAAAGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: VDGVGIWSVEAS*LHLISCIKKNQ Trigger: CTGGTTCTTTTTAATACAAGAGATGAGATGCAACCAACTTGCCTCGACTGACCATATGCCCACCCCGTCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTATGCTCTTGGAAAGCCTaGGAGAAGAGAGTGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CFMFSTAGTHVLTGLIILCSWKA*EKRVPG Trigger: CCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCA...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTATCAGCCAGTCCATCATaGACTCAGTGCCTGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CFMFSTAGTHVLTGLIILSASPS*TQCLSH Trigger: GTGGCTCAGGCACTGAGTCAATGATGGACTGGCTGA...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | ACACCAGGTTCACTGTGTTTCACCAGTTTGCACAGATaGTCAAGTCAGAAGTCTAGCATGCCCAAATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TPGSLCFTSLHR*SSQKSSMPKSG Trigger: TCCTGATTTGGGCATGCTAGACTTCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | AGTGAAAGACACCAGGTTCACTGTGTTTCACCAGTTTaGACAGATGATCAAGTCAGAAGTCTAGCATGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SERHQVHCVSPV*TDDQVRSLACP Trigger: TGGGCATGCTAGACTTCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR GCA 72 bp | AAATCAAAGTGGACTGATCCCGCTACAACGTCAGTATaGAAGGTGATGCTTCAACTCTCTTCATGGTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: KSKWTDPATTSV*KVMLQLSSWLT Trigger: CGTCAACCATGAAGAGAGTTGAAGCATCACCTTGCATACTGACGTTGTAGCGGGATCAGTCCACTTTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | GAAAAAGAAAACAGAGTTCTGTGGCTGACACAGGGTTaGCCAAGAGGATACATGTCTATACCCAGACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EKENRVLWLTQG*PRGYMSIPRQR Trigger: CCTTTGTCTGGGTATAGACATGTATCCTCTTGGCCAACCCTGTGTCAGCCACAGAACTCTGTTTTCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | AAGCAATTAATAAGGAATGAGTACCCAGGGGCATGTTaGTACCCAAGGGTTGCTCTGGGTTTTGTTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQLIRNEYPGAC*YPRVALGFVSN Trigger: GTTGGAAACAAAACCCAGAGCAACCCTTGGGTACCAACATGCCCCTGGGTACTCATTCCTTATTAATTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | AGGCCTCCAGTGAGAACTGCTCCATTGGATCAGTTTTaGCACGAACCATCTCAGCATCAATATTTCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPPVRTAPLDQF*HEPSQHQYFLA Trigger: TGCTAAGAAATATTGATGCTGAGATGGTTCGTGTCAAAACTGATCCAATGGAGCAGTTCTCACTGGAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | TGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATaGTTCCAGAGACTCCGGGTCATTGTGTATGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: WLNGKPCLQSKA*FQRLRVIVYGQ Trigger: TTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| 3UTR GCA 72 bp | TCTTGTATTAAAAAGAACCAGCTTCAAAACACTGCTTaGCTCCAAATGAGTGCTGAGCTTAGCCACGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCIKKNQLQNTA*LQMSAELSHGK Trigger: CTTGCCGTGGCTAAGCTCAGCACTCATTTGGAGGCAAGCAGTGTTTTGAAGCTGGTTCTTTTTAATACAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CTAAGGCTCTTTAGGTGTGCTAAGCTGAAAGGAAAGTaGAATCTCTCAGATGAGATAGATCTGGTCCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LRLFRCAKLKGK*NLSDEIDLVLT Trigger: AGTCAGGACCAGATCTATCTCATCTGAGAGATTTCACTTTCCTTTCAGCTTAGCACACCTAAAGAGCCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTAGGGTTGCTCTGGGTTTaGTTTCCAACACAGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: CFMFSTAGTHVLTGLIILGLLWV*FPTQKP Trigger: AGGTTTCTGTGTTGGAAACAAAACCCAGAGCAACCC...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | TCCAAAGTCTATTTCCTGCCAAGTTCAGTTCCAGAATaGAAGTCAATGCTGACAGGAATAGCAAGTGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SKVYFLPSSVPE*KSMLTGIASAI Trigger: AATGGCACTTGCTATTCCTGTCAGCATTGACTTTCATTCTGGAACTGAACTTGGCAGGAAATAGACTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR TCA 72 bp | CCCTTTGAGAACAAAGAAATCCCTTTAAATGAAGGGTaGTGTATAAATGTGTGGGCTAAGCAACCAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PFENKEIPLNEG*CINVWAKQPMR Trigger: TCTCATTGGTTGCTTAGCCCACACATTTATACATCACCCTTCATTTAAAGGGATTTCTTTGTTCTCAAAGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CCA 72 bp | GTATTAGATAAAACGACATTATGCTGTAGTCAACAGTaGCTTATCATCAGGTCAGGAAATATCAAAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VLDKTTLCCSQQ*LIIRSGNIKVY Trigger: ATAGACTTTGATATTTCCTGACCTGATGATAAGCCACTGTTGACTACAGCATAATGTCGTTTTATCTAATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CAA 72 bp | CTGGCGGGAAAGTCCAGTGCGGATTGCCTCATGCTCTaGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGKSSADCLML*ESLGEESARAS Trigger: GCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | AGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGTGAGGTGACACCGCGATGTGTGCTGTGCTaGTCAGCTGGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SITGLSSHQRRSCCEVTPRCVLC*SAGWGL Trigger: CAGGCCCCAGCCAGCTGACCAGCACAGCACACATCG...CGGTGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGCTGGTCAGCTGGCTaGGGCCTGCTTTCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPRGLSITGLSSHQRRSCCWSAG*GLLSEV Trigger: CACCTCTGAAAGCAGGCCCCAGCCAGCTGACCAGCA...GCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR TCA 90 bp | CTCACAGCGTTTCAGAAGCAGGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGGAAGTTGCTGTGAGGTaGCACCGACTCTCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTAFQKQGLGLHLGPLTWEVAVR*HRLSHW Trigger: CCAGTGGGAGAGTCGGTGTCACCTCACAGCAACTTC...CCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTCTGAAACGCTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAAGTTGCTGTGAGGTGACACCGACTCTCCCACTGGCCACCACATTCCACCAGTCTGGCCCAGAATaGGGGGTCTTTTGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSCCEVTPTLPLATTFHQSGPE*GVFCSA Trigger: AGCGCTACAAAAGACCCCCCATTCTGGGCCAGACTG...GTGGAATGTGGTGGCCAGTGGGAGAGTCGGTGTCACCTCACAGCAACTTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| 3UTR CAA 72 bp | GCCTGCTGGATTCCTGGCGGGAAAGTCCAGTGCGGATaGCCTCATGCTCTTGGAAAGCCTTGGAGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACWIPGGKVQCG*PHALGKPWRRE Trigger: CTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACTTTCCCGCCAGGAATCCAGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | AGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGTGAGGTGACACCGGCCTGCTTTCAGAGGTaGCTCCTGCCCGTTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SITGLSSHQRRSCCEVTPACFQR*LLPVVT Trigger: TGTTACAACGGGCAGGAGCCACCTCTGAAAGCAGGC...CGGTGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| 3UTR CAA 72 bp | AGTCCAGTGCGGATTGCCTCATGCTCTTGGAAAGCCTaGGAGAAGAGAGTGCCAGGGCCAGCCACATACACA | + |
|
Preference number: 4 (lower is better) Translates to: SPVRIASCSWKA*EKRVPGPATYT Trigger: TGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGGCAATCCGCACTGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACAAGGCTCCACAAGGTGAGCATCCATCAGTAAGGTCCACTGGAAGCAGCAAGGAGAAGTTGCTGTaGGGTGACACCGACTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDKAPQGEHPSVRSTGSSKEKLL*GDTDSP Trigger: GGGAGAGTCGGTGTCACCTCACAGCAACTTCTCCTT...GCTGCTTCCAGTGGACCTTACTGATGGATGCTCACCTTGTGGAGCCTTGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACAAGGCTCCACAAGGTGAGCATCCATCAGTAAGGTCCACTGGAAGCAGCAAGGCTGGCAGCAGATaGCGTAATACCTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDKAPQGEHPSVRSTGSSKAGSR*RNTCPG Trigger: CCCTGGACAGGTATTACGCCATCTGCTGCCAGCCTT...GCTGCTTCCAGTGGACCTTACTGATGGATGCTCACCTTGTGGAGCCTTGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTCGATGTGTGCTGTGCTaGTCAGCTGGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMIPETPGHCVWAISPVPRCVLC*SAGWGL Trigger: CAGGCCCCAGCCAGCTGACCAGCACAGCACACATCG...AGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| 3UTR CAA 72 bp | CCAGCTTTCAATTCCATCCACTCAGCCAGTCCATCATaGACTCAGTGCCTGAGCCACTCACCCACCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: PAFNSIHSASPS*TQCLSHSPTTM Trigger: CATGGTGGTGGGTGAGTGGCTCAGGCACTGAGTCAATGATGGACTGGCTGAGTGGATGGAATTGAAAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR TCA 90 bp | CATGCTCTTGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACACACAATAGGCCAGCACCATaGGGAGAAACGGGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HALGKPWRRECQGQPHTHNRPAP*GETGCR Trigger: TCTACATCCCGTTTCTCCTCATGGTGCTGGCCTATT...GTGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
||
| CDS-3UTR TCA 90 bp | AGGACTGGCTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCAATAGGCCAGCACCATaGGGAGAAACGGGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTGFVSSHSCLLGHCPRGNRPAP*GETGCR Trigger: TCTACATCCCGTTTCTCCTCATGGTGCTGGCCTATT...GCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAGCCAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGGACTGGCTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGTCCACAATATTGGTaGCAAAGAAGGGGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGFVSSHSCLLGHCPRGPQYW*QRRGPS Trigger: GCTGGGCCCCCTTCTTTGTCACCAATATTGTGGACC...CCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAGCCAGTCCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGTGGTCTCTGTCCTCATaGGATGTGTGCTGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQGLKYHWAEQPPKEKLWSLSS*DVCCAG Trigger: ACCAGCACAGCACACATCGCATGAGGACAGAGACCA...CAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR CCA 90 bp | CATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTCTTGGACCAGCTCAATaGCACCAAAGGGCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HCPRGLSITGLSSHQRRSLGPAQ*HQRASP Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTCCAAG...ACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| 3UTR CAA 72 bp | TGGCTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATaGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLRFKPQLSSRS*SQGLKYHWAEQ Trigger: CTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | AGATCTGGTCCTGACTTCCTTCCAGGGTTTCTGCAGAGACCGTTTCCCACTGACCATCAGGATAACCACTaGAAGGAACGTGAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGPDFLPGFLQRPFPTDHQDNH*KEREQH Trigger: GTGCTGCTCACGTTCCTTGCAGTGGTTATCCTGATG...GTCAGTGGGAAACGGTCTCTGCAGAAACCCTGGAAGGAAGTCAGGACCAGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGGTCATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGCATCAGGATAACCACTaGAAGGAACGTGAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLSQGLKYHWAEQPPKHQDNH*KEREQH Trigger: GTGCTGCTCACGTTCCTTGCAGTGGTTATCCTGATG...CTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAATGACCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGAGCCAGATTCTGTTTTCTCATTTATTTTCCTGAGCTaGCTGTCCCTGCACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGLTFGSSDLEPDSVFSFIFLS*LSLHTA Trigger: GGCTGTGTGCAGGGACAGGCAGCTCAGGAAAATAAA...TGAGAAAACAGAATCTGGCTCCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR GCA 90 bp | AGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGTGAGGTGACACCGTGTAACATCTGTATCTaGTGGGCATGCTCCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SITGLSSHQRRSCCEVTPCNICI*WACSLA Trigger: TGCTAAGGAGCATGCCCAGCAGATACAGATGTTACA...CGGTGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR CCA 90 bp | CATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGCTTGGACCAGCTCAATaGCACCAAAGGGCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HDSRDSGSLCMGNFSSSWLGPAQ*HQRASP Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTCCAAG...CCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR CCA 90 bp | AAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCGCCTGCTTTCAGAGGTaGCTCCTGCCCGTTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KHDSRDSGSLCMGNFSSSACFQR*LLPVVT Trigger: TGTTACAACGGGCAGGAGCCACCTCTGAAAGCAGGC...GGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| 3UTR CAA 72 bp | CTCACAGCGTTTCAGAAGCAGGGCCTGGGCTTACATTaGGGTCCTCTGACTTGGAGCCAGATTCTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAFQKQGLGLH*GPLTWSQILFS Trigger: AGAAAACAGAATCTGGCTCCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTCTGAAACGCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CAA 72 bp | GGAATGAGTACCCAGGGGCATGTTGGTACCCAAGGGTaGCTCTGGGTTTTGTTTCCAACACAGAAACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMSTQGHVGTQG*LWVLFPTQKPH Trigger: GTGAGGTTTCTGTGTTGGAAACAAAACCCAGAGCAACCCTTGGGTACCAACATGCCCCTGGGTACTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACAAGGCTCCACAAGGTGAGCATCCATCAGTAAGGTCCACTGGAAGCAGCGGACAGTGTAGTCTATaGAAGGGTCCACAATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDKAPQGEHPSVRSTGSSGQCSL*KGPQYW Trigger: CCAATATTGTGGACCCTTTCATAGACTACACTGTCC...GCTGCTTCCAGTGGACCTTACTGATGGATGCTCACCTTGTGGAGCCTTGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR GCA 90 bp | GGATACATGTCTATACCCAGACAAAGGAAAGAAAGTGAACAAGGGCCCAGCAGACCATCACCAGCAGGTTaGCCAAGATGGCCATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYMSIPRQRKESEQGPSRPSPAG*PRWPSG Trigger: TCCTGATGGCCATCTTGGGCAACCTGCTGGTGATGG...TCTGCTGGGCCCTTGTTCACTTTCTTTCCTTTGTCTGGGTATAGACATGTATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR GCA 90 bp | TATGGGCAATTTCTCCAGTTCCTGGTGATGGCCACTGTGCAAAACTGTATACACCCATCACCAGCAGGTTaGCCAAGATGGCCATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YGQFLQFLVMATVQNCIHPSPAG*PRWPSG Trigger: TCCTGATGGCCATCTTGGGCAACCTGCTGGTGATGG...GTGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR GCA 90 bp | CACCTAGAAGATAGCAAGAGTGACAAGGCTCCACAAGGTGAGCATCCATCAGTATGGTCTCTGTCCTCATaGGATGTGTGCTGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLEDSKSDKAPQGEHPSVWSLSS*DVCCAG Trigger: ACCAGCACAGCACACATCGCATGAGGACAGAGACCA...TACTGATGGATGCTCACCTTGTGGAGCCTTGTCACTCTTGCTATCTTCTAGGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | CACCTAGAAGATAGCAAGAGTGACAAGGCTCCACAAGGTGAGCATCCATCAGTACTTGGACCAGCTCAATaGCACCAAAGGGCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HLEDSKSDKAPQGEHPSVLGPAQ*HQRASP Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTCCAAG...TACTGATGGATGCTCACCTTGTGGAGCCTTGTCACTCTTGCTATCTTCTAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | GGATACATGTCTATACCCAGACAAAGGAAAGAAAGTGAACAAGGGCCCAGCAGAGCCTGCTTTCAGAGGTaGCTCCTGCCCGTTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GYMSIPRQRKESEQGPSRACFQR*LLPVVT Trigger: TGTTACAACGGGCAGGAGCCACCTCTGAAAGCAGGC...TCTGCTGGGCCCTTGTTCACTTTCTTTCCTTTGTCTGGGTATAGACATGTATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | GGATGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATGATTCCAGAGTGCTGGTCAGCTGGCTaGGGCCTGCTTTCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GWMAKWKAMSSIKSMIPECWSAG*GLLSEV Trigger: CACCTCTGAAAGCAGGCCCCAGCCAGCTGACCAGCA...CTCTGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGCTCATAGAAGAGTCTGAGCATCTCTTAATAGATGCATGTGATGAACCACGATGTGTGCTGTGCTaGTCAGCTGGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKLIEESEHLLIDACDEPRCVLC*SAGWGL Trigger: CAGGCCCCAGCCAGCTGACCAGCACAGCACACATCG...TGGTTCATCACATGCATCTATTAAGAGATGCTCAGACTCTTCTATGAGCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGCAATTTCTCCAGTTCCTGGTGATGGCCACTGTGCAAAACTGTATACACCAGTCTGGCCCAGAATaGGGGGTCTTTTGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YGQFLQFLVMATVQNCIHQSGPE*GVFCSA Trigger: AGCGCTACAAAAGACCCCCCATTCTGGGCCAGACTG...GTGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGACTTCCTCAAATACCGCCTGCTGGATTCCTGGCGGGAAAGTCCAGTGGTATCCCTTAGTACATaGGTGGATCCATTAATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPDFLKYRLLDSWRESPVVSLST*VDPLMV Trigger: AACCATTAATGGATCCACCCATGTACTAAGGGATAC...CACTGGACTTTCCCGCCAGGAATCCAGCAGGCGGTATTTGAGGAAGTCAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR GCA 90 bp | CTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCTTAAGTATTTTATTTTCCTGAGCTaGCTGTCCCTGCACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFKPQLSSRSLSQGLKYFIFLS*LSLHTA Trigger: GGCTGTGTGCAGGGACAGGCAGCTCAGGAAAATAAA...ATACTTAAGCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | AGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTGATGGCCACTCCAACATTAATGCGATaGGTAGAGGGGTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRVIVYGQFLQFLVMATPTLMR*VEGSSC Trigger: ACAAGATGACCCCTCTACGCATCGCATTAATGTTGG...AGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR CCA 90 bp | AGCCATGTCTTCAATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGAAGGCTGGCAGCAGATaGCGTAATACCTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHVFNQKHDSRDSGSLCMKAGSR*RNTCPG Trigger: CCCTGGACAGGTATTACGCCATCTGCTGCCAGCCTT...CATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR CCA 90 bp | AGGACTGGCTTCGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCGTGGAGTTAGAGTTGTaGCTGAATTTCCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTGFVSSHSCLLGHCPRGVELEL*LNFLFS Trigger: AGAGAAAAGGAAATTCAGCCACAACTCTAACTCCAC...GCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACGAAGCCAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGCTCATAGAAGAGTCTGAGCATCTCTTAATAGATGCATGTGATGAACCATGCTGGTCAGCTGGCTaGGGCCTGCTTTCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKLIEESEHLLIDACDEPCWSAG*GLLSEV Trigger: CACCTCTGAAAGCAGGCCCCAGCCAGCTGACCAGCA...TGGTTCATCACATGCATCTATTAAGAGATGCTCAGACTCTTCTATGAGCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CAA 72 bp | GGTCCACTGGAAGCAGCAAAGCCATACTCTGAGGTTTaGAGCTGCTACTGTGTGTTTCACCACAAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GPLEAAKPYSEV*SCYCVFHHKLI Trigger: TATGAGCTTGTGGTGAAACACACAGTAGCAGCTCAAAACCTCAGAGTATGGCTTTGCTGCTTCCAGTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGATGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATGATTCCAGGTCCACAATATTGGTaGCAAAGAAGGGGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGWMAKWKAMSSIKSMIPGPQYW*QRRGPS Trigger: GCTGGGCCCCCTTCTTTGTCACCAATATTGTGGACC...TGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCATCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGTGAGGTGACAGGACAGTGTAGTCTATaGAAGGGTCCACAATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSITGLSSHQRRSCCEVTGQCSL*KGPQYW Trigger: CCAATATTGTGGACCCTTTCATAGACTACACTGTCC...TGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | CGTTTCAAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCTTAAGTATCACCCAACATTAATGCGATaGGTAGAGGGGTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFKPQLSSRSLSQGLKYHPTLMR*VEGSSC Trigger: ACAAGATGACCCCTCTACGCATCGCATTAATGTTGG...GTGATACTTAAGCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTTGAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACACACAAGTAGCAATGTTGTTCCAGCCTTaGATTATGGGGAGAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WKALEKRVPGPATYTQVAMLFQP*IMGRKD Trigger: ATCTTTTCTCCCCATAATGCAAGGCTGGAACAACAT...TGCTACTTGTGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGGTCATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGATGTTGTTCCAGCCTTaGATTATGGGGAGAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSLSQGLKYHWAEQPPKMLFQP*IMGRKD Trigger: ATCTTTTCTCCCCATAATGCAAGGCTGGAACAACAT...CTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAATGACCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| CDS-3UTR CCA 90 bp | TGGATGGAGCCTGTCCTGAAGAGAATGGTACCACTAAACACAGGAAAAAGAAAACAGTCTGGCCCAGAATaGGGGGTCTTTTGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WMEPVLKRMVPLNTGKRKQSGPE*GVFCSA Trigger: AGCGCTACAAAAGACCCCCCATTCTGGGCCAGACTG...TTTTCTTTTTCCTGTGTTTAGTGGTACCATTCTCTTCAGGACAGGCTCCATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR GCA 90 bp | AGCCATGTCTTCAATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGCATCAGGATAACCACTaGAAGGAACGTGAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHVFNQKHDSRDSGSLCMHQDNH*KEREQH Trigger: GTGCTGCTCACGTTCCTTGCAGTGGTTATCCTGATG...CATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR GCA 90 bp | AATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCTTTATTTTCCTGAGCTaGCTGTCCCTGCACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NQKHDSRDSGSLCMGNFSFIFLS*LSLHTA Trigger: GGCTGTGTGCAGGGACAGGCAGCTCAGGAAAATAAA...GGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTGATGGCCACTGTATGTTGTTCCAGCCTTaGATTATGGGGAGAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPGHCVWAISPVPGDGHCMLFQP*IMGRKD Trigger: ATCTTTTCTCCCCATAATGCAAGGCTGGAACAACAT...ACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR GCA 90 bp | ATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTTGTAACATCTGTATCTaGTGGGCATGCTCCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MIPETPGHCVWAISPVPGCNICI*WACSLA Trigger: TGCTAAGGAGCATGCCCAGCAGATACAGATGTTACA...ACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGACACCAGGTTCACTGTGTTTCACCAGTTTGCACAGATGATCAAGTCAGACACCAAAGGAGAAGTTaGTGTGAGGTGACACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: ERHQVHCVSPVCTDDQVRHQRRS*CEVTPT Trigger: AGTCGGTGTCACCTCACAGCAACTTCTCCTTTGGTG...TCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAAGTCCTTAGTACATaGGTGGATCCATTAATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPQLSSRSLSQGLKYHWAEVLST*VDPLMV Trigger: AACCATTAATGGATCCACCCATGTACTAAGGACTTC...AGCCCAGTGATACTTAAGCCCCTGGGACAATGACCTAGAAGACAGCTGTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
||
| 3UTR CAA 72 bp | GAAGCAGGGCCTGGGCTTACATTTGGGTCCTCTGACTaGGAGCCAGATTCTGTTTTCTCATTACTAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EAGPGLTFGSSD*EPDSVFSLLAF Trigger: AAATGCTAGTAATGAGAAAACAGAATCTGGCTCCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| 3UTR CAA 72 bp | GACGGGGTGGGCATATGGTCAGTCGAGGCAAGTTGGTaGCATCTCATCTCTTGTATTAAAAAGAACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGVGIWSVEASW*HLISCIKKNQL Trigger: AAGCTGGTTCTTTTTAATACAAGAGATGAGATGCAACCAACTTGCCTCGACTGACCATATGCCCACCCCGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGATGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATGATTCCAAATAGGCCAGCACCATaGGGAGAAACGGGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGWMAKWKAMSSIKSMIPNRPAP*GETGCR Trigger: TCTACATCCCGTTTCTCCTCATGGTGCTGGCCTATT...TGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCATCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
||
| CDS-3UTR GCA 90 bp | GGATACATGTCTATACCCAGACAAAGGAAAGAAAGTGAACAAGGGCCCAGCAGACCAACATTAATGCGATaGGTAGAGGGGTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYMSIPRQRKESEQGPSRPTLMR*VEGSSC Trigger: ACAAGATGACCCCTCTACGCATCGCATTAATGTTGG...TCTGCTGGGCCCTTGTTCACTTTCTTTCCTTTGTCTGGGTATAGACATGTATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR GCA 90 bp | GGATACATGTCTATACCCAGACAAAGGAAAGAAAGTGAACAAGGGCCCAGCAGATGTAACATCTGTATCTaGTGGGCATGCTCCTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: GYMSIPRQRKESEQGPSRCNICI*WACSLA Trigger: TGCTAAGGAGCATGCCCAGCAGATACAGATGTTACA...TCTGCTGGGCCCTTGTTCACTTTCTTTCCTTTGTCTGGGTATAGACATGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR GCA 90 bp | TGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATGATTCCAGAGACTTGGTCTCTGTCCTCATaGGATGTGTGCTGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: WMAKWKAMSSIKSMIPETWSLSS*DVCCAG Trigger: ACCAGCACAGCACACATCGCATGAGGACAGAGACCA...AGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| 3UTR CAA 72 bp | GGAAAAAGAAAACAGAGTTCTGTGGCTGACACAGGGTaGGCCAAGAGGATACATGTCTATACCCAGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: GKRKQSSVADTG*AKRIHVYTQTK Trigger: CTTTGTCTGGGTATAGACATGTATCCTCTTGGCCAACCCTGTGTCAGCCACAGAACTCTGTTTTCTTTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CAA 72 bp | GAGGCCTCCAGTGAGAACTGCTCCATTGGATCAGTTTaGACACGAACCATCTCAGCATCAATATTTCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: EASSENCSIGSV*TRTISASIFLS Trigger: GCTAAGAAATATTGATGCTGAGATGGTTCGTGTCAAAACTGATCCAATGGAGCAGTTCTCACTGGAGGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR TCA 90 bp | TGCAGACACAGATGGGGATGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAGGACAGTGTAGTCTATaGAAGGGTCCACAATATTGG | + |
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Preference number: 4 (lower is better) Translates to: CRHRWGWMAKWKAMSSIKGQCSL*KGPQYW Trigger: CCAATATTGTGGACCCTTTCATAGACTACACTGTCC...TTTGATTGAAGACATGGCTTTCCATTTAGCCATCCATCCCCATCTGTGTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CCA 90 bp | GCAGACACAGATGGGGATGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGTGGAGTTAGAGTTGTaGCTGAATTTCCTTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ADTDGDGWLNGKPCLQSKVELEL*LNFLFS Trigger: AGAGAAAAGGAAATTCAGCCACAACTCTAACTCCAC...TTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCATCCCCATCTGTGTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CCA 90 bp | AATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCACAGGTCTTAGTACATaGGTGGATCCATTAATGGTT | + |
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Preference number: 4 (lower is better) Translates to: NQKHDSRDSGSLCMGNFSTGLST*VDPLMV Trigger: AACCATTAATGGATCCACCCATGTACTAAGACCTGT...GGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CCA 90 bp | CACAAGCTCATAGAAGAGTCTGAGCATCTCTTAATAGATGCATGTGATGAACCAGTGGAGTTAGAGTTGTaGCTGAATTTCCTTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HKLIEESEHLLIDACDEPVELEL*LNFLFS Trigger: AGAGAAAAGGAAATTCAGCCACAACTCTAACTCCAC...TGGTTCATCACATGCATCTATTAAGAGATGCTCAGACTCTTCTATGAGCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| 3UTR CAA 72 bp | GCTTATCATCAGGTCAGGAAATATCAAAGTCTATCCTaGTTCAGTAACTTAGTGACCCATTATGTAACATTC | + |
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Preference number: 4 (lower is better) Translates to: AYHQVRKYQSLS*FSNLVTHYVTF Trigger: GAATGTTACATAATGGGTCACTAAGTTACTGAACAAGGATAGACTTTGATATTTCCTGACCTGATGATAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS CCA 90 bp | GATGTGTGCTGTGCTGGTCAGCTGGCTGGGGCCTGCTTTCAGAGGTaGCTCCTGCCCGTTGTAACATCTGTATCTGCTGGGCATGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: DVCCAGQLAGACFQR*LLPVVTSVSAGHAP Trigger: AGGAGCATGCCCAGCAGATACAGATGTTACAACGGGCAGGAGCCACCTCTGAAAGCAGGCCCCAGCCAGCTGACCAGCACAGCACACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS GCA 90 bp | CACCATCACCAGCAGGTTGCCCAAGATGGCCATCAGGATAACCACTaGAAGGAACGTGAGCAGCACGACCTTCTCCACGGACCTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: HHHQQVAQDGHQDNH*KEREQHDLLHGPET Trigger: GGTTTCAGGTCCGTGGAGAAGGTCGTGCTGCTCACGTTCCTTGCAGTGGTTATCCTGATGGCCATCTTGGGCAACCTGCTGGTGATGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS-3UTR CAA 90 bp | CCTCATGCTCTTGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACAACCATCACCAGCAGGTaGCCCAAGATGGCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHALGKPWRRECQGQPHTTITSR*PKMAIR Trigger: CCTGATGGCCATCTTGGGCAACCTGCTGGTGATGGT...TGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | CTCACAGCGTTTCAGAAGCAGGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGATAAGCCCAGATGTCTaGGACCAGCTCAATGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LTAFQKQGLGLHLGPLTWISPDV*DQLNGT Trigger: GGTGCCATTGAGCTGGTCCAAGACATCTGGGCTTAT...CCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCCTGCTTCTGAAACGCTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR CAA 90 bp | TGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACACACAAGTAGCAAAAGTCTTGGCTGCCTaGGTCTCTGTCCTCATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WKALEKRVPGPATYTQVAKVLAA*VSVLMR Trigger: TCGCATGAGGACAGAGACCAAGGCAGCCAAGACTTT...TGCTACTTGTGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | TCATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGAAAGTCTTGGCTGCCTaGGTCTCTGTCCTCATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSQGLKYHWAEQPPKEKKVLAA*VSVLMR Trigger: TCGCATGAGGACAGAGACCAAGGCAGCCAAGACTTT...CTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | CCTCATGCTCTTGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACATCAACTATGCCGATGTaGTTCCAGCCTTGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: PHALGKPWRRECQGQPHTSTMPM*FQPCIM Trigger: CATAATGCAAGGCTGGAACAACATCGGCATAGTTGA...TGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCAAGAGCATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | AGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGTGAGGTGACACCGCACGTGGAGTTAGAGTaGTGGCTGAATTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SITGLSSHQRRSCCEVTPHVELE*WLNFLF Trigger: GAAAAGGAAATTCAGCCACAACTCTAACTCCACGTG...CGGTGTCACCTCACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | CCACAGCTGTCTTCTAGGTCATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGATGACACATAAAGTCTaGGCTGCCTTGGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQLSSRSLSQGLKYHWAEMTHKV*AALVSV Trigger: GACAGAGACCAAGGCAGCCAAGACTTTATGTGTCAT...CTCAGCCCAGTGATACTTAAGCCCCTGGGACAATGACCTAGAAGACAGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | AATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCACCATCACCAGCAGGTaGCCCAAGATGGCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NQKHDSRDSGSLCMGNFSTITSR*PKMAIR Trigger: CCTGATGGCCATCTTGGGCAACCTGCTGGTGATGGT...GGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CAA 90 bp | TCATTGTCCCAGGGGCTTAAGTATCACTGGGCTGAGCAGCCACCAAAGGAGAAGGATGTTGTTCCAGCCTaGCATTATGGGGAGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSQGLKYHWAEQPPKEKDVVPA*HYGEKR Trigger: TCTTTTCTCCCCATAATGCAAGGCTGGAACAACATC...CTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCCCTGGGACAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTGATGGCTCAACTATGCCGATGTaGTTCCAGCCTTGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: PETPGHCVWAISPVPGDGSTMPM*FQPCIM Trigger: CATAATGCAAGGCTGGAACAACATCGGCATAGTTGA...GCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CAA 90 bp | TGGAAAGCCTTGGAGAAGAGAGTGCCAGGGCCAGCCACATACACACAAGTAGCACACGTGGAGTTAGAGTaGTGGCTGAATTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKALEKRVPGPATYTQVAHVELE*WLNFLF Trigger: GAAAAGGAAATTCAGCCACAACTCTAACTCCACGTG...TGCTACTTGTGTGTATGTGGCTGGCCCTGGCACTCTCTTCTCCAAGGCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027560.8 ENSMUST00000237114.2 |
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| CDS-3UTR CAA 90 bp | GGGCCTGGGCTTACATTTGGGTCCTCTGACTTGGAGCCAGATTCTGTTTTCTCAGATGTTGTTCCAGCCTaGCATTATGGGGAGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGLTFGSSDLEPDSVFSDVVPA*HYGEKR Trigger: TCTTTTCTCCCCATAATGCAAGGCTGGAACAACATC...TGAGAAAACAGAATCTGGCTCCAAGTCAGAGGACCCAAATGTAAGCCCAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGACATTGTTCATGGTCTCACAGCGTTTCAGAAGCAGGGCCTGGGCTTACTCAACTATGCCGATGTaGTTCCAGCCTTGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: GKTLFMVSQRFRSRAWAYSTMPM*FQPCIM Trigger: CATAATGCAAGGCTGGAACAACATCGGCATAGTTGA...GTAAGCCCAGGCCCTGCTTCTGAAACGCTGTGAGACCATGAACAATGTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS TCA 90 bp | AGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTaGTGGCCACTGTGCAAAACTGTATACCTTAGTACATGGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RDSGSLCMGNFSSSW*WPLCKTVYLSTWVD Trigger: ATCCACCCATGTACTAAGGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238081.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCCATGTCTTCAATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATAAGCCCAGATGTCTaGGACCAGCTCAATGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ESHVFNQKHDSRDSGSLCISPDV*DQLNGT Trigger: GGTGCCATTGAGCTGGTCCAAGACATCTGGGCTTAT...ACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCATGTTCTCAACAGCAGGCACACATGTACTTACTGGATTGATTATACTAACCATCACCAGCAGGTaGCCCAAGATGGCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFMFSTAGTHVLTGLIILTITSR*PKMAIR Trigger: CCTGATGGCCATCTTGGGCAACCTGCTGGTGATGGT...TAGTATAATCAATCCAGTAAGTACATGTGTGCCTGCTGTTGAGAACATGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR CAA 90 bp | AAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCTCCAGTTCCGATGTTGTTCCAGCCTaGCATTATGGGGAGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KHDSRDSGSLCMGNFSSSDVVPA*HYGEKR Trigger: TCTTTTCTCCCCATAATGCAAGGCTGGAACAACATC...GGAACTGGAGAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CAA 90 bp | TATGGGCAATTTCTCCAGTTCCTGGTGATGGCCACTGTGCAAAACTGTATACACCACGTGGAGTTAGAGTaGTGGCTGAATTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YGQFLQFLVMATVQNCIHHVELE*WLNFLF Trigger: GAAAAGGAAATTCAGCCACAACTCTAACTCCACGTG...GTGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CAA 90 bp | TGGATGGCTAAATGGAAAGCCATGTCTTCAATCAAAAGCATGATTCCAGAGACTAAAGTCTTGGCTGCCTaGGTCTCTGTCCTCATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WMAKWKAMSSIKSMIPETKVLAA*VSVLMR Trigger: TCGCATGAGGACAGAGACCAAGGCAGCCAAGACTTT...AGTCTCTGGAATCATGCTTTTGATTGAAGACATGGCTTTCCATTTAGCCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS-3UTR CAA 90 bp | GAAAGACACCAGGTTCACTGTGTTTCACCAGTTTGCACAGATGATCAAGTCAGAATGACACATAAAGTCTaGGCTGCCTTGGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERHQVHCVSPVCTDDQVRMTHKV*AALVSV Trigger: GACAGAGACCAAGGCAGCCAAGACTTTATGTGTCAT...TCTGACTTGATCATCTGTGCAAACTGGTGAAACACAGTGAACCTGGTGTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027560.8 |
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| CDS-3UTR CAA 90 bp | TTCAATCAAAAGCATGATTCCAGAGACTCCGGGTCATTGTGTATGGGCAATTTCATGACACATAAAGTCTaGGCTGCCTTGGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNQKHDSRDSGSLCMGNFMTHKV*AALVSV Trigger: GACAGAGACCAAGGCAGCCAAGACTTTATGTGTCAT...GAAATTGCCCATACACAATGACCCGGAGTCTCTGGAATCATGCTTTTGATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236691.2 |
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| CDS CCA 72 bp | CTCTGTCCTCATGCGATGTGTGCTGTGCTGGTCAGCTaGCTGGGGCCTGCTTTCAGAGGTGGCTCCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LCPHAMCAVLVS*LGPAFRGGSCP Trigger: CGGGCAGGAGCCACCTCTGAAAGCAGGCCCCAGCCAGCTGACCAGCACAGCACACATCGCATGAGGACAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS CCA 72 bp | TGTGCTGGTCAGCTGGCTGGGGCCTGCTTTCAGAGGTaGCTCCTGCCCGTTGTAACATCTGTATCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CAGQLAGACFQR*LLPVVTSVSAG Trigger: CCCAGCAGATACAGATGTTACAACGGGCAGGAGCCACCTCTGAAAGCAGGCCCCAGCCAGCTGACCAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS GCA 72 bp | CAGCAGGTTGCCCAAGATGGCCATCAGGATAACCACTaGAAGGAACGTGAGCAGCACGACCTTCTCCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: QQVAQDGHQDNH*KEREQHDLLHG Trigger: TCCGTGGAGAAGGTCGTGCTGCTCACGTTCCTTGCAGTGGTTATCCTGATGGCCATCTTGGGCAACCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS GCA 72 bp | TGGGAAGGACCCAGCAGCCTCCCAACATTAATGCGATaGGTAGAGGGGTCATCTTGTTCCTATAAACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WEGPSSLPTLMR*VEGSSCSYKPK Trigger: CTTTGGTTTATAGGAACAAGATGACCCCTCTACGCATCGCATTAATGTTGGGAGGCTGCTGGGTCCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS CCA 72 bp | TCATCTTGTTCCTATAAACCAAAGGCTGGCAGCAGATaGCGTAATACCTGTCCAGGGAAATACAGCACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCSYKPKAGSR*RNTCPGKYSTG Trigger: ACCTGTGCTGTATTTCCCTGGACAGGTATTACGCCATCTGCTGCCAGCCTTTGGTTTATAGGAACAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS TCA 72 bp | GGGTCATTGTGTATGGGCAATTTCTCCAGTTCCTGGTaGTGGCCACTGTGCAAAACTGTATACCTTAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: GSLCMGNFSSSW*WPLCKTVYLST Trigger: TGTACTAAGGTATACAGTTTTGCACAGTGGCCATCACCAGGAACTGGAGAAATTGCCCATACACAATGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238081.2 |
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| CDS GCA 72 bp | TCTATCACATCAACTATGCCGATGTTGTTCCAGCCTTaGATTATGGGGAGAAAAGATATAAACATGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SITSTMPMLFQP*IMGRKDINMGR Trigger: CCTTCCCATGTTTATATCTTTTCTCCCCATAATGCAAGGCTGGAACAACATCGGCATAGTTGATGTGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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| CDS CAA 72 bp | CTCTATCACATCAACTATGCCGATGTTGTTCCAGCCTaGCATTATGGGGAGAAAAGATATAAACATGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYHINYADVVPA*HYGEKRYKHGK Trigger: CTTCCCATGTTTATATCTTTTCTCCCCATAATGCAAGGCTGGAACAACATCGGCATAGTTGATGTGATAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027560.8 ENSMUST00000236691.2 ENSMUST00000237114.2 ENSMUST00000238081.2 |
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