Pregenerated sensors for HS1BP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020605Ensembl transcript IDs: ENSMUST00000020927.10, ENSMUST00000220199.2, ENSMUST00000220300.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACTGGAGAAAGGCTaGCGAGCAAGTTCAGATCCTGAGGGCAGACGAGGCCTCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: VALGTAWLVAPLEKG*RASSDPEGRRGLRA Trigger: GGCTCTGAGGCCTCGTCTGCCCTCAGGATCTGAACTTGCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 90 bp | GAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACTaGAGAAAGGCTGACGAGCAAGTTCAGATCCTGAGGGCAGACGAG | + |
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Preference number: 1 (lower is better) Translates to: EGTGLLWAQLGWWLH*RKADEQVQILRADE Trigger: CTCGTCTGCCCTCAGGATCTGAACTTGCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 90 bp | CATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTaGCTCCACTGGAGAAAGGCTGACGAGCAAGTTCAGATCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: HLLEGTGLLWAQLGW*LHWRKADEQVQILR Trigger: CCTCAGGATCTGAACTTGCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 90 bp | CTATGCTCCACAAAACACCATCTACTGGAAGGCACAGGGTTGCTCTaGGCACAGCTTGGCTGGTGGCTCCACTGGAGAAAGGCTGACGAG | + |
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Preference number: 1 (lower is better) Translates to: LCSTKHHLLEGTGLL*AQLGWWLHWRKADE Trigger: CTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATGGTGTTTTGTGGAGCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR GCA 90 bp | ACATTCTATGCTCCACAAAACACCATCTACTGGAAGGCACAGGGTTaGTCTGGGCACAGCTTGGCTGGTGGCTCCACTGGAGAAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: TFYAPQNTIYWKAQG*SGHSLAGGSTGERL Trigger: CAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATGGTGTTTTGTGGAGCATAGAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 90 bp | GTTCAGATCCTGAGGGCAGACGAGGCCTCAGAGCCTCAAACCCCATaGGCTAAACTCTGGGAGATGCTAAGACCTACTTTGTTGAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: VQILRADEASEPQTP*AKLWEMLRPTLLKA Trigger: GGCTTTCAACAAAGTAGGTCTTAGCATCTCCCAGAGTTTAGCCCATGGGGTTTGAGGCTCTGAGGCCTCGTCTGCCCTCAGGATCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 90 bp | ACAGAATACATTCTAACATTCTATGCTCCACAAAACACCATCTACTaGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: TEYILTFYAPQNTIY*KAQGCSGHSLAGGS Trigger: GGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATGGTGTTTTGTGGAGCATAGAATGTTAGAATGTATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR TCA 90 bp | CATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACAGGCCCAGCATAGGGTaGAAGGCAGGGTTGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: HLLEGTGLLWAQLGWWLHRPSIG*KAGLWG Trigger: TCCCCACAACCCTGCCTTTCACCCTATGCTGGGCCT...GTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGGTCCTGGAAGCCCTCCGTGCACTAGAAAGGCAAGGCTGGGACTACGTTAGAAGGATGTGGGACTaGGGCTGGGGAGTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LGVLEALRALERQGWDYVRRMWD*GWGVPA Trigger: GGCAGGGACTCCCCAGCCCCAGTCCCACATCCTTCT...AACGTAGTCCCAGCCTTGCCTTTCTAGTGCACGGAGGGCTTCCAGGACCCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGGCAAACAACCATGCCAGGGTGTCCCAAAAGCTCCACAGCAGACAAGTCCCCCACTTCCCATGCTaGGCTGGCAGAGCCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CGANNHARVSQKLHSRQVPHFPC*AGRASG Trigger: CCCACTGGCTCTGCCAGCTCAGCATGGGAAGTGGGG...GACTTGTCTGCTGTGGAGCTTTTGGGACACCCTGGCATGGTTGTTTGCCCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR TCA 90 bp | CATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACGAAGCCAGAAGAGCCTaGGAAGGGACTTGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HLLEGTGLLWAQLGWWLHEARRA*EGTWVR Trigger: CCTGACCCAAGTCCCTTCTCAGGCTCTTCTGGCTTC...GTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CAA 90 bp | CAAAACACCATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTaGGCTGGTGGCTCCACTGGAGAAAGGCTGACGAGCAAGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: QNTIYWKAQGCSGHS*AGGSTGERLTSKFR Trigger: TCTGAACTTGCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATGGTGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTACACAGAACAGCTTGGACACCTGCTCAGAACTAGGCAGGTGACAGGGGACTGTCCTTTCCCTTGGTaGGGGCACTGTCCTCTGATC | + |
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Preference number: 2 (lower is better) Translates to: PYTEQLGHLLRTRQVTGDCPFPW*GHCPLI Trigger: GATCAGAGGACAGTGCCCCCACCAAGGGAAAGGACA...GTCCCCTGTCACCTGCCTAGTTCTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTACACAGAACAGCTTGGACACCTGCTCAGAACTAGGCAGGTGACAGGGGACAGATGTCCTTTCCCTTaGTGGGGGCACTGTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PYTEQLGHLLRTRQVTGDRCPFP*WGHCPL Trigger: CAGAGGACAGTGCCCCCACCAAGGGAAAGGACATCT...GTCCCCTGTCACCTGCCTAGTTCTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCACGTGGGGATCAGTCCGGAAGCAGAGTTGGGTaGAGGCTGTCTAGAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: ESGRSGQILLGTPRGDQSGSRVG*RLSRVS Trigger: ACTGACTCTAGACAGCCTCCACCCAACTCTGCTTCC...GGACTGATCCCCACGTGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGGTTCAAGCTCTGGGCACAGCTTaGCTGGTGGCTCCACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RELVAKAHRNGYKGTRVQALGTA*LVAPLE Trigger: CTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGC...TTGAACCCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CAA 90 bp | CGTTTTCTTCTTAGCATTGGAAGCCAGAAGAGCCTGAGAAGGGACTaGGGTCAGGGCAGCCTGGAGAGCTGGTCTTTCTCCTCAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: RFLLSIGSQKSLRRD*GQGSLESWSFSSEH Trigger: GTGTTCTGAGGAGAAAGACCAGCTCTCCAGGCTGCCCTGACCCAAGTCCCTTCTCAGGCTCTTCTGGCTTCCAATGCTAAGAAGAAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGAGCTGGTCTTTCTCCTCAGAACACACCTTGGGGGCCCGAGCAGCCATTCTGATCTCAAGACATaGTCACAAATGCCCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PGELVFLLRTHLGGPSSHSDLKT*SQMPSF Trigger: AAAGGAGGGCATTTGTGAGCATGTCTTGAGATCAGA...ATGGCTGCTCGGGCCCCCAAGGTGTGTTCTGAGGAGAAAGACCAGCTCTCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTACACAGAACAGCTTGGACACCTGCTCAGAACTAGGCAGGTGACAGGGGACGTAGAGAGTTCAGAGTaGCCTGTCCCATGTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PYTEQLGHLLRTRQVTGDVESSE*PVPCSP Trigger: AGGAGAACATGGGACAGGCCACTCTGAACTCTCTAC...GTCCCCTGTCACCTGCCTAGTTCTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTAGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGGGCTGGTGGCTCCACTaGAGAAAGGCTGACGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: RGRELVAKAHRNGYKGTRGWWLH*RKADEQ Trigger: TTGCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCC...CCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCTACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR GCA 90 bp | CTAGGAGAGCAGAGTATCCGGTCCTTACACAGAACAGCTTGGACACCTGCTCAGAGACATGCTCACAAATaGCCTCCTTTCCATAGCCCG | + |
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Preference number: 2 (lower is better) Translates to: LGEQSIRSLHRTAWTPAQRHAHK*PPFHSP Trigger: CGGGCTATGGAAAGGAGGGCATTTGTGAGCATGTCT...CTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGGACCGGATACTCTGCTCTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTAGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGAAGGCAACAAACAATTaGACTGTGCCACTCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RGRELVAKAHRNGYKGTRKATNN*TVPLRG Trigger: GCCCCTGAGTGGCACAGTTCAATTGTTTGTTGCCTT...CCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCTACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGCCACACTAGAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCAGGGGACCCAAGATACTaGAGGCAACAAACAATTGAA | + |
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Preference number: 2 (lower is better) Translates to: GKATLESGRSGQILLGTPGDPRY*RQQTIE Trigger: TTCAATTGTTTGTTGCCTTCAGTATCTTGGGTCCCC...TGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTCTAGTGTGGCTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAACTTCCCATGCTGAGCTaGCAGAGCCAGTGGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKLPMLS*QSQWVQ Trigger: TTGTACCCACTGGCTCTGCCAGCTCAGCATGGGAAG...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAACAGTGGGTACAAGTATaGAGAAGATGTCCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKQWVQV*RRCPFP Trigger: AGGGAAAGGACATCTTCTTCATACTTGTACCCACTG...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGGTTCAAACCCAAGGAACAAAGTaGCTGCATTTTGTTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RELVAKAHRNGYKGTRVQTQGTK*LHFVLK Trigger: TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGT...TTGAACCCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 72 bp | CTGAGAAGGGACTTGGGTCAGGGCAGCCTGGAGAGCTaGTCTTTCTCCTCAGAACACACCTTGGGGGCCCGA | + |
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Preference number: 3 (lower is better) Translates to: LRRDLGQGSLES*SFSSEHTLGAR Trigger: TCGGGCCCCCAAGGTGTGTTCTGAGGAGAAAGACCAGCTCTCCAGGCTGCCCTGACCCAAGTCCCTTCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | GAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCACGTGGGGATCAGTCCTGCTCTGGGCACAGCTaGGCTGGTGGCTCCACTGGA | + |
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Preference number: 3 (lower is better) Translates to: ESGRSGQILLGTPRGDQSCSGHS*AGGSTG Trigger: TCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCA...GGACTGATCCCCACGTGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 72 bp | GAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTaGCTCCACTGGAGAAAGGCTGACGAGCAAGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: EGTGLLWAQLGW*LHWRKADEQVQ Trigger: CTGAACTTGCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGGCAAACAACCATGCCAGGGTGTCCCAAAAGCTCCACAGCAGACAAGTCAGCCTGAGAAGGGACTaGGGTCAGGGCAGCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: CGANNHARVSQKLHSRQVSLRRD*GQGSLE Trigger: CTCCAGGCTGCCCTGACCCAAGTCCCTTCTCAGGCT...GACTTGTCTGCTGTGGAGCTTTTGGGACACCCTGGCATGGTTGTTTGCCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR GCA 72 bp | GCTCCACAAAACACCATCTACTGGAAGGCACAGGGTTaGTCTGGGCACAGCTTGGCTGGTGGCTCCACTGGA | + |
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Preference number: 3 (lower is better) Translates to: APQNTIYWKAQG*SGHSLAGGSTG Trigger: TCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATGGTGTTTTGTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGGCAAACAACCATGCCAGGGTGTCCCAAAAGCTCCACAGCAGACAAGTCGAAAGGGAAGCAGAGTaGGGTGGAGGCTGTCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: CGANNHARVSQKLHSRQVEREAE*GGGCLE Trigger: CTCTAGACAGCCTCCACCCAACTCTGCTTCCCTTTC...GACTTGTCTGCTGTGGAGCTTTTGGGACACCCTGGCATGGTTGTTTGCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR TCA 72 bp | CCCATGCTGAGCTGGCAGAGCCAGTGGGTACAAGTATaGAGAAGATGTCCTTTCCCTTGGTGGGGGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: PMLSWQSQWVQV*RRCPFPWWGHC Trigger: ACAGTGCCCCCACCAAGGGAAAGGACATCTTCTTCATACTTGTACCCACTGGCTCTGCCAGCTCAGCATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 72 bp | ACAAAACACCATCTACTGGAAGGCACAGGGTTGCTCTaGGCACAGCTTGGCTGGTGGCTCCACTGGAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: TKHHLLEGTGLL*AQLGWWLHWRK Trigger: CTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATGGTGTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTAGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGAAGGGAGTAGAAGGCTaGGGGTCCTGGAAGCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: RGRELVAKAHRNGYKGTRKGVEG*GSWKPS Trigger: GGAGGGCTTCCAGGACCCCAAGCCTTCTACTCCCTT...CCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCTACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGGCAAACAACCATGCCAGGGTGTCCCAAAAGCTCCACAGCAGACAAGTCGCTCCTACACACCCATaGGCTCCTATGTCATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: CGANNHARVSQKLHSRQVAPTHP*APMSSV Trigger: GACAGATGACATAGGAGCCAATGGGTGTGTAGGAGC...GACTTGTCTGCTGTGGAGCTTTTGGGACACCCTGGCATGGTTGTTTGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR GCA 72 bp | GGGCACTGTCCTCTGATCTCAAGACATGCTCACAAATaGCCTCCTTTCCATAGCCCGCTGGGTGGACATGAT | + |
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Preference number: 3 (lower is better) Translates to: GHCPLISRHAHK*PPFHSPLGGHD Trigger: ATCATGTCCACCCAGCGGGCTATGGAAAGGAGGGCATTTGTGAGCATGTCTTGAGATCAGAGGACAGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR TCA 72 bp | TACGTTTTCTTCTTAGCATTGGAAGCCAGAAGAGCCTaGGAAGGGACTTGGGTCAGGGCAGCCTGGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: YVFFLALEARRA*EGTWVRAAWRA Trigger: AGCTCTCCAGGCTGCCCTGACCCAAGTCCCTTCTCAGGCTCTTCTGGCTTCCAATGCTAAGAAGAAAACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 72 bp | ACTAGGGTTCAAAGATGCCCAGGGACCACAGTAGGGTaGCTCTACAAAAGATTGGGCCACGTGAACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: TRVQRCPGTTVG*LYKRLGHVNLP Trigger: AGGAAGGTTCACGTGGCCCAATCTTTTGTAGAGCCACCCTACTGTGGTCCCTGGGCATCTTTGAACCCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | GAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCACGTGGGGATCAGTCCCTAAGACCTACTTTGTaGAAAGCCACATCCAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: ESGRSGQILLGTPRGDQSLRPTL*KATSKD Trigger: GTCCTTGGATGTGGCTTTCAACAAAGTAGGTCTTAG...GGACTGATCCCCACGTGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 72 bp | GACATGCTCACAAATGCCCTCCTTTCCATAGCCCGCTaGGTGGACATGATACGGCTTAATTCCTGTGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: DMLTNALLSIAR*VDMIRLNSCGV Trigger: AACACCACAGGAATTAAGCCGTATCATGTCCACCCAGCGGGCTATGGAAAGGAGGGCATTTGTGAGCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTAGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGTGGCTCTACAAAAGATaGGGCCACGTGAACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RGRELVAKAHRNGYKGTRWLYKR*GHVNLP Trigger: AGGAAGGTTCACGTGGCCCAATCTTTTGTAGAGCCA...CCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCTACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR TCA 72 bp | CTCAGAACTAGGCAGGTGACAGGGGACACAGTGAGATaGAAGGCTGTCAGACTTGATACTCCTAGTCTGATC | + |
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Preference number: 3 (lower is better) Translates to: LRTRQVTGDTVR*KAVRLDTPSLI Trigger: GATCAGACTAGGAGTATCAAGTCTGACAGCCTTTCATCTCACTGTGTCCCCTGTCACCTGCCTAGTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CCA 72 bp | ATCAGTCCATGGTCATCCAAGCTCCTACACACCCATTaGCTCCTATGTCATCTGTCACCCAAAGTAGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: ISPWSSKLLHTH*LLCHLSPKVGA Trigger: TGCACCTACTTTGGGTGACAGATGACATAGGAGCCAATGGGTGTGTAGGAGCTTGGATGACCATGGACTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR TCA 72 bp | TCTTACTACAGAGTAGGAGCTGGGGACCCAAGATACTaGAGGCAACAAACAATTGAACTGTGCCACTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SYYRVGAGDPRY*RQQTIELCHSG Trigger: CCCTGAGTGGCACAGTTCAATTGTTTGTTGCCTTCAGTATCTTGGGTCCCCAGCTCCTACTCTGTAGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACGTTCTGGGCGGGATGTaGGCCCTCTGCTCTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: HLLEGTGLLWAQLGWWLHVLGGM*ALCSHW Trigger: CCAGTGAGAGCAGAGGGCCCACATCCCGCCCAGAAC...GTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR TCA 90 bp | AGCAGAACCCACATAGTCACATACAGGCCTCCTCCCCAGGCCCAGCATAGGGTGGGGCCGGTGCTTGGCTaGCTTGAACACAGCCAACCG | + |
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Preference number: 4 (lower is better) Translates to: SRTHIVTYRPPPQAQHRVGPVLG*LEHSQP Trigger: CGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCC...CACCCTATGCTGGGCCTGGGGAGGAGGCCTGTATGTGACTATGTGGGTTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACCAGGCCCAGTGTGGGTaGCTGCACTTCATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLLEGTGLLWAQLGWWLHQAQCG*LHFILL Trigger: CAGCAGGATGAAGTGCAGCCACCCACACTGGGCCTG...GTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | CCTTACACAGAACAGCTTGGACACCTGCTCAGAACTAGGCAGGTGACAGGGGACGATGGTGAGCCGAGGTaGAGGCTTGGGCCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PYTEQLGHLLRTRQVTGDDGEPR*RLGPHG Trigger: GCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATC...GTCCCCTGTCACCTGCCTAGTTCTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CAA 72 bp | ATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTaGGCTGGTGGCTCCACTGGAGAAAGGCTGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYWKAQGCSGHS*AGGSTGERLTS Trigger: GCTCGTCAGCCTTTCTCCAGTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | TGGGGTCCTGGAAGCCCTCCGTGCACTAGAAAGGCAAGGCTGGGACTACGTTTTGCCCTCTGCTCTCACTaGCAGCAGGCAGCAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGPGSPPCTRKARLGLRFALCSH*QQAAVE Trigger: CTCTACTGCTGCCTGCTGCCAGTGAGAGCAGAGGGC...AAAACGTAGTCCCAGCCTTGCCTTTCTAGTGCACGGAGGGCTTCCAGGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR TCA 90 bp | CCTGGAGAGCTGGTCTTTCTCCTCAGAACACACCTTGGGGGCCCGAGCAGCCATGGTCCTCTTCAACTCTaGACAGCTCCTTGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGELVFLLRTHLGGPSSHGPLQL*TAPWRH Trigger: ATGCCTCCAAGGAGCTGTTCAGAGTTGAAGAGGACC...ATGGCTGCTCGGGCCCCCAAGGTGTGTTCTGAGGAGAAAGACCAGCTCTCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | CCTGGAGAGCTGGTCTTTCTCCTCAGAACACACCTTGGGGGCCCGAGCAGCCATACATCTTCGGGCCGGTaGTTGGCTGACTTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: PGELVFLLRTHLGGPSSHTSSGR*LADLNT Trigger: TGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGT...ATGGCTGCTCGGGCCCCCAAGGTGTGTTCTGAGGAGAAAGACCAGCTCTCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CATCTACTGGAAGGCACAGGGTTGCTCTGGGCACAGCTTGGCTGGTGGCTCCACCCAACTGGGCATCCTTaGAGACACAGCGTAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLEGTGLLWAQLGWWLHPTGHP*RHSVGS Trigger: AGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGG...GTGGAGCCACCAGCCAAGCTGTGCCCAGAGCAACCCTGTGCCTTCCAGTAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CAA 72 bp | TGCCCAGGGACCACAGTAGGGTGGCTCTACAAAAGATaGGGCCACGTGAACCTTCCTCCGCAGTCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPGTTVGWLYKR*GHVNLPPQSER Trigger: CCTCTCTGACTGCGGAGGAAGGTTCACGTGGCCCAATCTTTTGTAGAGCCACCCTACTGTGGTCCCTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | GGCAAAGCCACACTAGAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCACAGCTCTGGGCTGCCTaGCAACTGGGCATCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKATLESGRSGQILLGTPQLWAA*QLGILG Trigger: TCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTG...TGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTCTAGTGTGGCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | ACTTCCCATGCTGAGCTGGCAGAGCCAGTGGGTACAAGTATGAAGAAGATGTCCCACCTCCTGGTGCTGTaGGACAGACAGGTCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSHAELAEPVGTSMKKMSHLLVL*DRQVEA Trigger: GGCCTCGACCTGTCTGTCCCACAGCACCAGGAGGTG...GGACATCTTCTTCATACTTGTACCCACTGGCTCTGCCAGCTCAGCATGGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | GGCAAAGCCACACTAGAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCATTACCCCGCACCTCCTaGTGCTGTGGGACAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKATLESGRSGQILLGTPLPRTS*CCGTDR Trigger: CCTGTCTGTCCCACAGCACCAGGAGGTGCGGGGTAA...TGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTCTAGTGTGGCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CTAGGAGAGCAGAGTATCCGGTCCTTACACAGAACAGCTTGGACACCTGCTCAGGGGCTGCCTGCCAACTaGGCATCCTTGGAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGEQSIRSLHRTAWTPAQGLPAN*ASLETQ Trigger: CTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCC...CTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGGACCGGATACTCTGCTCTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | AGAGGTAGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGGCCGAGGTGCAGGCTTaGGCCTCACGGCCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGRELVAKAHRNGYKGTRAEVQA*ASRPLL Trigger: CAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGC...CCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCTACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | TGGGGTCCTGGAAGCCCTCCGTGCACTAGAAAGGCAAGGCTGGGACTACGTTTTATCTGTTGCTGCTTCTaGGGTCCAGACCCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGPGSPPCTRKARLGLRFICCCF*GPDPGS Trigger: AGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGAT...AAAACGTAGTCCCAGCCTTGCCTTTCTAGTGCACGGAGGGCTTCCAGGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | TGTGGGGCAAACAACCATGCCAGGGTGTCCCAAAAGCTCCACAGCAGACAAGTCGGCTTGGGCTTAGTCTaGGGCTTGGGCTTTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGANNHARVSQKLHSRQVGLGLV*GLGFGS Trigger: TGAACCAAAGCCCAAGCCCCAGACTAAGCCCAAGCC...GACTTGTCTGCTGTGGAGCTTTTGGGACACCCTGGCATGGTTGTTTGCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | GGACTACGTTTTCTTCTTAGCATTGGAAGCCAGAAGAGCCTGAGAAGGGACTTGGAACTTGTCTGGAGGTaGGGAGCACCGCCGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GLRFLLSIGSQKSLRRDLELVWR*GAPPGT Trigger: AGTCCCCGGCGGTGCTCCGCACCTCCAGACAAGTTC...CAAGTCCCTTCTCAGGCTCTTCTGGCTTCCAATGCTAAGAAGAAAACGTAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | AATTCCTGTGGTGTTCCCAGCTCTACAGTCTGCAGAGAGTCCTTGTCCATCCCAAGGCTGGGGGAGTCTTaGGCAAGTGTGTCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSCGVPSSTVCRESLSIPRLGES*ASVSWS Trigger: GGACCATGACACACTTGCCCAAGACTCCCCCAGCCT...TGGGATGGACAAGGACTCTCTGCAGACTGTAGAGCTGGGAACACCACAGGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR TCA 90 bp | AATTCCTGTGGTGTTCCCAGCTCTACAGTCTGCAGAGAGTCCTTGTCCATCCCACCTGTGTGTGCATTCTaGACTTGTCTGGAGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSCGVPSSTVCRESLSIPPVCAF*TCLEVR Trigger: CCGCACCTCCAGACAAGTTCAGAATGCACACACAGG...TGGGATGGACAAGGACTCTCTGCAGACTGTAGAGCTGGGAACACCACAGGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | CCTTACACAGAACAGCTTGGACACCTGCTCAGAACTAGGCAGGTGACAGGGGACATAGCTTGGATCTGTTaGTGCTTCTGCGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PYTEQLGHLLRTRQVTGDIAWIC*CFCGPD Trigger: GTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTAT...GTCCCCTGTCACCTGCCTAGTTCTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | GAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCACGTGGGGATCAGTCCTGCACTTCATCCTGCTaGTCAAAGAAGTCAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESGRSGQILLGTPRGDQSCTSSC*SKKSKA Trigger: GGCTTTTGACTTCTTTGAGCAGCAGGATGAAGTGCA...GGACTGATCCCCACGTGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | GGACTACGTTTTCTTCTTAGCATTGGAAGCCAGAAGAGCCTGAGAAGGGACTTGCCCAGTGTGGGTGGCTaGACTTCATCCTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRFLLSIGSQKSLRRDLPSVGG*TSSCCS Trigger: TGAGCAGCAGGATGAAGTGCAGCCACCCACACTGGG...CAAGTCCCTTCTCAGGCTCTTCTGGCTTCCAATGCTAAGAAGAAAACGTAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | AGAGGTAGAGAGCTGGTAGCCAAGGCACACAGGAATGGATATAAAGGGACTAGGACTTCTCCACATCCTTaGTGCTCAGGCCCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRELVAKAHRNGYKGTRTSPHP*CSGPVW Trigger: CCACACTGGGCCTGAGCAGCAAGGATGTGGAGAAGT...CCTAGTCCCTTTATATCCATTCCTGTGTGCCTTGGCTACCAGCTCTCTACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | ACTTCCCATGCTGAGCTGGCAGAGCCAGTGGGTACAAGTATGAAGAAGATGTCCGGATCTCATCAAACATaGCTCGCCTCTCCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSHAELAEPVGTSMKKMSGSHQT*LASPGC Trigger: ACATCCGGGAGAGGCGAGCCATGTTTGATGAGATCC...GGACATCTTCTTCATACTTGTACCCACTGGCTCTGCCAGCTCAGCATGGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | AATTCCTGTGGTGTTCCCAGCTCTACAGTCTGCAGAGAGTCCTTGTCCATCCCAGTCGAGGCCTGTGTGTaGATTCTGAACTTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSCGVPSSTVCRESLSIPVEACV*ILNLSG Trigger: TCCAGACAAGTTCAGAATGCACACACAGGCCTCGAC...TGGGATGGACAAGGACTCTCTGCAGACTGTAGAGCTGGGAACACCACAGGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CAA 72 bp | GAGCTGGGGACCCAAGATACTGAAGGCAACAAACAATaGAACTGTGCCACTCAGGGGCTCCTGAAAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ELGTQDTEGNKQ*NCATQGLLKVT Trigger: AGTCACTTTCAGGAGCCCCTGAGTGGCACAGTTCAATTGTTTGTTGCCTTCAGTATCTTGGGTCCCCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| 3UTR CAA 72 bp | GATCAGTCCATGGTCATCCAAGCTCCTACACACCCATaGGCTCCTATGTCATCTGTCACCCAAAGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DQSMVIQAPTHP*APMSSVTQSRC Trigger: GCACCTACTTTGGGTGACAGATGACATAGGAGCCAATGGGTGTGTAGGAGCTTGGATGACCATGGACTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAATCACTGTCCCCTGGCTaGCTGGCTGTGTCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKSLSPG*LAVSSK Trigger: CTTGGATGACACAGCCAGCCAGCCAGGGGACAGTGA...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | GGACTACGTTTTCTTCTTAGCATTGGAAGCCAGAAGAGCCTGAGAAGGGACTTGGGCTGCACTTCATCCTaGTGCTCAAAGAAGTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLRFLLSIGSQKSLRRDLGCTSS*CSKKSK Trigger: TTTTGACTTCTTTGAGCAGCAGGATGAAGTGCAGCC...CAAGTCCCTTCTCAGGCTCTTCTGGCTTCCAATGCTAAGAAGAAAACGTAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR GCA 90 bp | GGACTACGTTTTCTTCTTAGCATTGGAAGCCAGAAGAGCCTGAGAAGGGACTTGTGGTCCCGGATATACTaGAAGATGTCCATTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRFLLSIGSQKSLRRDLWSRIY*KMSISS Trigger: GGATGAAATGGACATCTTGCAGTATATCCGGGACCA...CAAGTCCCTTCTCAGGCTCTTCTGGCTTCCAATGCTAAGAAGAAAACGTAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAACCTCACGGCCACTTCTaGGCGTTTCTTGGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKPHGHF*AFLGLL Trigger: AAGAAGCCCAAGAAACGCCCAGAAGTGGCCGTGAGG...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CCA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAAATCTGGTACTCCACATaGCCGGACATCATCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKIWYST*PDIILP Trigger: GGGTAAGATGATGTCCGGCCATGTGGAGTACCAGAT...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CCA 90 bp | GTCATCCAAGACAGAGGGATCTCGGGTGGCAAGGCCCGTAGCCCCTaGGGCTCTGGTGCCAAGAACTGGACGACATCTTCGGGCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VIQDRGISGGKARSP*GSGAKNWTTSSGRC Trigger: GCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCACCAGAGCCCCAGGGGCTACGGGCCTTGCCACCCGAGATCCCTCTGTCTTGGATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS GCA 90 bp | CCCCGCGTCAGGGTCTACCTCCTCATCAAAGATGGTGAGCCGAGGTaGAGGCTTGGGCCTCACGGCCACTTCTGGGCGTTTCTTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRVRVYLLIKDGEPR*RLGPHGHFWAFLGL Trigger: AAGCCCAAGAAACGCCCAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATCTTTGATGAGGAGGTAGACCCTGACGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CCA 90 bp | GTCCTCTTCAACTCTGAACAGCTCCTTGGAGGCATCCCCGTGTTCTaGGCGGGATGTGGGCCCTCTGCTCTCACTGGCAGCAGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLFNSEQLLGGIPVF*AGCGPSALTGSRQQ Trigger: CTGCTGCCTGCTGCCAGTGAGAGCAGAGGGCCCACATCCCGCCCAGAACACGGGGATGCCTCCAAGGAGCTGTTCAGAGTTGAAGAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS GCA 90 bp | CCCTGGGGCTCTGGTGCCAAGAACTGGACGACATCTTCGGGCCGGTaGTTGGCTGACTTGAACACAGCCAACCGGGTCACCACTAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PWGSGAKNWTTSSGR*LADLNTANRVTTRI Trigger: GATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCACCAGAGCCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS CCA 90 bp | AAAGATGGTGAGCCGAGGTGCAGGCTTGGGCCTCACGGCCACTTCTaGGCGTTTCTTGGGCTTCTTGGAGCGCATGATACCCAGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KDGEPRCRLGPHGHF*AFLGLLGAHDTQGI Trigger: GATCCCCTGGGTATCATGCGCTCCAAGAAGCCCAAGAAACGCCCAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CCA 90 bp | CTCCACATGGCCGGACATCATCTTACCCCGCACCTCCTGGTGCTGTaGGACAGACAGGTCGAGGCCTGTGTGTGCATTCTGAACTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHMAGHHLTPHLLVL*DRQVEACVCILNLS Trigger: AGACAAGTTCAGAATGCACACACAGGCCTCGACCTGTCTGTCCCACAGCACCAGGAGGTGCGGGGTAAGATGATGTCCGGCCATGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
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| CDS CCA 90 bp | TTGAACACAGCCAACCGGGTCACCACTAGGATCTGGTACTCCACATaGCCGGACATCATCTTACCCCGCACCTCCTGGTGCTGTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LNTANRVTTRIWYST*PDIILPRTSWCCGT Trigger: TGTCCCACAGCACCAGGAGGTGCGGGGTAAGATGATGTCCGGCCATGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
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| CDS CCA 90 bp | TGCTTGGCTGACTTGAACACAGCCAACCGGGTCACCACTAGGATCTaGTACTCCACATGGCCGGACATCATCTTACCCCGCACCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLADLNTANRVTTRI*YSTWPDIILPRTSW Trigger: CCAGGAGGTGCGGGGTAAGATGATGTCCGGCCATGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
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| CDS CCA 90 bp | CCCGACAAACAGGACCTTCCTAGGCAGCGGGGGCAGGCTGGCTGCTaGGTAACAACTGTACAGCTTCTGGTAAAACTCCTCGATCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDKQDLPRQRGQAGC*VTTVQLLVKLLDLA Trigger: AGCGAGATCGAGGAGTTTTACCAGAAGCTGTACAGTTGTTACCCAGCAGCCAGCCTGCCCCCGCTGCCTAGGAAGGTCCTGTTTGTCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS TCA 90 bp | GTGCCAAGAACTGGACGACATCTTCGGGCCGGTGCTTGGCTGACTTaGACACAGCCAACCGGGTCACCACTAGGATCTGGTACTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: VPRTGRHLRAGAWLT*TQPTGSPLGSGTPH Trigger: ATGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS CCA 90 bp | CCAACTGGGCATCCTTGGAGACACAGCGTAGGATCTCATCAAACATaGCTCGCCTCTCCCGGATGTCAGACTCCCCGACAAACAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: PTGHPWRHSVGSHQT*LASPGCQTPRQTGP Trigger: AGGTCCTGTTTGTCGGGGAGTCTGACATCCGGGAGAGGCGAGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS CCA 90 bp | TCCTGCTGCTCAAAGAAGTCAAAAGCCTCATCACTGTCCCCTGGCTaGCTGGCTGTGTCATCCAAGACAGAGGGATCTCGGGTGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCCSKKSKASSLSPG*LAVSSKTEGSRVAR Trigger: CCTTGCCACCCGAGATCCCTCTGTCTTGGATGACACAGCCAGCCAGCCAGGGGACAGTGATGAGGCTTTTGACTTCTTTGAGCAGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 ENSMUST00000220300.2 |
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| CDS CCA 90 bp | CTGGGCAATGCTGGCTTAGCTGGGACTAGAGGCTTGGGCTTAGTCTaGGGCTTGGGCTTTGGTTCAGATCCCAGGTTCAGAATCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGNAGLAGTRGLGLV*GLGFGSDPRFRIRS Trigger: GGACCTGATTCTGAACCTGGGATCTGAACCAAAGCCCAAGCCCCAGACTAAGCCCAAGCCTCTAGTCCCAGCTAAGCCAGCATTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CAA 90 bp | TGGGGTCCTGGAAGCCCTCCGTGCACTAGAAAGGCAAGGCTGGGACTACGTTTTACTTCTGGGCGTTTCTaGGGCTTCTTGGAGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: WGPGSPPCTRKARLGLRFTSGRF*GFLERM Trigger: CATGCGCTCCAAGAAGCCCAAGAAACGCCCAGAAGT...AAAACGTAGTCCCAGCCTTGCCTTTCTAGTGCACGGAGGGCTTCCAGGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS-3UTR CAA 90 bp | CCTTACACAGAACAGCTTGGACACCTGCTCAGAACTAGGCAGGTGACAGGGGACCTGATGCGGGCAGAGTaGGTTTCCTGGGCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYTEQLGHLLRTRQVTGDLMRAE*VSWAML Trigger: CAGCATTGCCCAGGAAACCAACTCTGCCCGCATCAG...GTCCCCTGTCACCTGCCTAGTTCTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS TCA 90 bp | AGACCAAGAACTGGACGACATCTTCGGGCCGGTGCTTGGCTGACTTaGACACAGCCAACCGGGTCACCACTAGGATCTGGTACTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RPRTGRHLRAGAWLT*TQPTGSPLGSGTPH Trigger: ATGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS GCA 90 bp | TGCAAGATGTCCATTTCATCCATAGCTTGGATCTGTTGCTGCTTCTaGGGTCCAGACCCAGGTTCTGACGGGCCCACTGATGCGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CKMSISSIAWICCCF*GPDPGSDGPTDAGR Trigger: TCTGCCCGCATCAGTGGGCCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CCA 90 bp | CTAAGAATTCTAGCAGCTCTGGGCTGCCTGCCAACTGGGCATCCTTaGAGACACAGCGTAGGATCTCATCAAACATGGCTCGCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRILAALGCLPTGHP*RHSVGSHQTWLASP Trigger: GGGAGAGGCGAGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAGAATTCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS CCA 90 bp | CTCCCACCAAGGACTTCTCCACATCCTTGCTGCTCAGGCCCAGTGTaGGTGGCTGCACTTCATCCTGCTGCTCAAAGAAGTCAAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPRTSPHPCCSGPV*VAALHPAAQRSQKP Trigger: AGGCTTTTGACTTCTTTGAGCAGCAGGATGAAGTGCAGCCACCCACACTGGGCCTGAGCAGCAAGGATGTGGAGAAGTCCTTGGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGAGCAGAGTATCCGGTCCTTACACAGAACAGCTTGGACACCTGCTCAGGGCTTAGTCTGGGGCTaGGGCTTTGGTTCAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGEQSIRSLHRTAWTPAQGLVWG*GFGSDP Trigger: GGGATCTGAACCAAAGCCCAAGCCCCAGACTAAGCC...CTGAGCAGGTGTCCAAGCTGTTCTGTGTAAGGACCGGATACTCTGCTCTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS-3UTR CAA 90 bp | AATTCCTGTGGTGTTCCCAGCTCTACAGTCTGCAGAGAGTCCTTGTCCATCCCAGCTGGGACTAGAGGCTaGGGCTTAGTCTGGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSCGVPSSTVCRESLSIPAGTRG*GLVWGL Trigger: CAAGCCCCAGACTAAGCCCAAGCCTCTAGTCCCAGC...TGGGATGGACAAGGACTCTCTGCAGACTGTAGAGCTGGGAACACCACAGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CCA 90 bp | GCTCTGGTGCCTAAGAATTCTAGCAGCTCTGGGCTGCCTGCCAACTaGGCATCCTTGGAGACACAGCGTAGGATCTCATCAAACATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALVPKNSSSSGLPAN*ASLETQRRISSNMA Trigger: AGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAGAATTCTTAGGCACCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCCCATGCTGAGCTGGCAGAGCCAGTGGGTACAAGTATGAAGAAGATGTCCACTCTGAACAGCTCCTaGGAGGCATCCCCGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSHAELAEPVGTSMKKMSTLNSS*EASPCS Trigger: AGAACACGGGGATGCCTCCAAGGAGCTGTTCAGAGT...GGACATCTTCTTCATACTTGTACCCACTGGCTCTGCCAGCTCAGCATGGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS GCA 90 bp | ATATACTGCAAGATGTCCATTTCATCCATAGCTTGGATCTGTTGCTaGTTCTGCGGTCCAGACCCAGGTTCTGACGGGCCCACTGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: IYCKMSISSIAWICC*FCGPDPGSDGPTDA Trigger: CGCATCAGTGGGCCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCAGTATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS GCA 90 bp | CGGATATACTGCAAGATGTCCATTTCATCCATAGCTTGGATCTGTTaGTGCTTCTGCGGTCCAGACCCAGGTTCTGACGGGCCCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RIYCKMSISSIAWIC*CFCGPDPGSDGPTD Trigger: ATCAGTGGGCCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCAGTATATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CCA 90 bp | TCATGGTCCCGGATATACTGCAAGATGTCCATTTCATCCATAGCTTaGATCTGTTGCTGCTTCTGCGGTCCAGACCCAGGTTCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SWSRIYCKMSISSIA*ICCCFCGPDPGSDG Trigger: CCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCAGTATATCCGGGACCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS-3UTR CAA 90 bp | GAGAGTGGTAGGTCAGGTCAGATACTGTTAGGGACCCCACGTGGGGATCAGTCCCATTTCATCCATAGCTaGGATCTGTTGCTGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESGRSGQILLGTPRGDQSHFIHS*DLLLLL Trigger: CAGAAGCAGCAACAGATCCAAGCTATGGATGAAATG...GGACTGATCCCCACGTGGGGTCCCTAACAGTATCTGACCTGACCTACCACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS GCA 90 bp | AGGCTGGGGGAGTCTTGGGCAAGTGTGTCATGGTCCCGGATATACTaGAAGATGTCCATTTCATCCATAGCTTGGATCTGTTGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLGESWASVSWSRIY*KMSISSIAWICCCF Trigger: GAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCAGTATATCCGGGACCATGACACACTTGCCCAAGACTCCCCCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAAGCCAACTGGGCATCCTaGGAGACACAGCGTAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKANWAS*ETQRRI Trigger: GATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGC...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGAAGCACAACTGACCCAAGGAACAAAGTGGCTGCATTTTGTTTTAAAACGTTTCTTGGGCTTCTaGGAGCGCATGATACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCEAQLTQGTKWLHFVLKRFLGF*ERMIPR Trigger: CCTGGGTATCATGCGCTCCAAGAAGCCCAAGAAACG...TTTTAAAACAAAATGCAGCCACTTTGTTCCTTGGGTCAGTTGTGCTTCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS TCA 72 bp | GCCCCGCGTCAGGGTCTACCTCCTCATCAAAGATGGTaGGCCGAGGTGCAGGCTTGGGCCTCACGGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: APRQGLPPHQRW*AEVQAWASRPL Trigger: AAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATCTTTGATGAGGAGGTAGACCCTGACGCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CCA 72 bp | GACAGAGGGATCTCGGGTGGCAAGGCCCGTAGCCCCTaGGGCTCTGGTGCCAAGAACTGGACGACATCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: DRGISGGKARSP*GSGAKNWTTSS Trigger: CGAAGATGTCGTCCAGTTCTTGGCACCAGAGCCCCAGGGGCTACGGGCCTTGCCACCCGAGATCCCTCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
||
| CDS CCA 72 bp | GAGCCGAGGTGCAGGCTTGGGCCTCACGGCCACTTCTaGGCGTTTCTTGGGCTTCTTGGAGCGCATGATACC | + |
|
Preference number: 6 (lower is better) Translates to: EPRCRLGPHGHF*AFLGLLGAHDT Trigger: GGTATCATGCGCTCCAAGAAGCCCAAGAAACGCCCAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CCA 72 bp | AACTCTGAACAGCTCCTTGGAGGCATCCCCGTGTTCTaGGCGGGATGTGGGCCCTCTGCTCTCACTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSEQLLGGIPVF*AGCGPSALTGS Trigger: GCTGCCAGTGAGAGCAGAGGGCCCACATCCCGCCCAGAACACGGGGATGCCTCCAAGGAGCTGTTCAGAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CAA 72 bp | GGCCTCACGGCCACTTCTGGGCGTTTCTTGGGCTTCTaGGAGCGCATGATACCCAGGGGATCCAGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLTATSGRFLGF*ERMIPRGSSTS Trigger: GGAGGTGCTGGATCCCCTGGGTATCATGCGCTCCAAGAAGCCCAAGAAACGCCCAGAAGTGGCCGTGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS GCA 72 bp | ACATGGCCGGACATCATCTTACCCCGCACCTCCTGGTaGTGTGGGACAGACAGGTCGAGGCCTGTGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TWPDIILPRTSW*CGTDRSRPVCA Trigger: TGCACACACAGGCCTCGACCTGTCTGTCCCACAGCACCAGGAGGTGCGGGGTAAGATGATGTCCGGCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
||
| CDS CCA 72 bp | GCCGGACATCATCTTACCCCGCACCTCCTGGTGCTGTaGGACAGACAGGTCGAGGCCTGTGTGTGCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGHHLTPHLLVL*DRQVEACVCIL Trigger: CAGAATGCACACACAGGCCTCGACCTGTCTGTCCCACAGCACCAGGAGGTGCGGGGTAAGATGATGTCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
||
| CDS CCA 72 bp | GCCAACCGGGTCACCACTAGGATCTGGTACTCCACATaGCCGGACATCATCTTACCCCGCACCTCCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ANRVTTRIWYST*PDIILPRTSWC Trigger: GCACCAGGAGGTGCGGGGTAAGATGATGTCCGGCCATGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
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| CDS CAA 72 bp | ACCTCCTCATCAAAGATGGTGAGCCGAGGTGCAGGCTaGGGCCTCACGGCCACTTCTGGGCGTTTCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSSKMVSRGAG*GLTATSGRFLG Trigger: GCCCAAGAAACGCCCAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATCTTTGATGAGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CAA 90 bp | TGGGGCTCTGGTGCCAAGAACTGGACGACATCTTCGGGCCGGTGCTaGGCTGACTTGAACACAGCCAACCGGGTCACCACTAGGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WGSGAKNWTTSSGRC*ADLNTANRVTTRIW Trigger: CCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCACCAGAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS GCA 72 bp | AGGGTCTACCTCCTCATCAAAGATGGTGAGCCGAGGTaGAGGCTTGGGCCTCACGGCCACTTCTGGGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVYLLIKDGEPR*RLGPHGHFWAF Trigger: AAACGCCCAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATCTTTGATGAGGAGGTAGACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS GCA 72 bp | TCTGGTGCCAAGAACTGGACGACATCTTCGGGCCGGTaGTTGGCTGACTTGAACACAGCCAACCGGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SGAKNWTTSSGR*LADLNTANRVT Trigger: GGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCACCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS CAA 72 bp | ATCAGGTCCAGGTCCTCTTCAACTCTGAACAGCTCCTaGGAGGCATCCCCGTGTTCTGGGCGGGATGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IRSRSSSTLNSS*EASPCSGRDVG Trigger: GCCCACATCCCGCCCAGAACACGGGGATGCCTCCAAGGAGCTGTTCAGAGTTGAAGAGGACCTGGACCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CAA 72 bp | GGTGCCAAGAACTGGACGACATCTTCGGGCCGGTGCTaGGCTGACTTGAACACAGCCAACCGGGTCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: GAKNWTTSSGRC*ADLNTANRVTT Trigger: AGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS CAA 90 bp | TCAGGGTCTACCTCCTCATCAAAGATGGTGAGCCGAGGTGCAGGCTaGGGCCTCACGGCCACTTCTGGGCGTTTCTTGGGCTTCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSTSSSKMVSRGAG*GLTATSGRFLGFLE Trigger: CTCCAAGAAGCCCAAGAAACGCCCAGAAGTGGCCGTGAGGCCCAAGCCTGCACCTCGGCTCACCATCTTTGATGAGGAGGTAGACCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CAA 90 bp | GGTGCCAAGAACTGGACGACATCTTCGGGCCGGTGCTTGGCTGACTaGAACACAGCCAACCGGGTCACCACTAGGATCTGGTACTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GAKNWTTSSGRCLAD*NTANRVTTRIWYST Trigger: TGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220199.2 |
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| CDS TCA 72 bp | ACTGGACGACATCTTCGGGCCGGTGCTTGGCTGACTTaGACACAGCCAACCGGGTCACCACTAGGATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGRHLRAGAWLT*TQPTGSPLGSG Trigger: ACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 ENSMUST00000220300.2 |
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| CDS GCA 72 bp | GGGCTCTGGTGCCTAAGAATTCTAGCAGCTCTGGGCTaGCTGCCAACTGGGCATCCTTGGAGACACAGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: GLWCLRILAALG*LPTGHPWRHSV Trigger: TACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAGAATTCTTAGGCACCAGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS GCA 72 bp | CCTCTTCTCCCACCAAGGACTTCTCCACATCCTTGCTaGTCAGGCCCAGTGTGGGTGGCTGCACTTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLPPRTSPHPC*SGPVWVAALHP Trigger: AGGATGAAGTGCAGCCACCCACACTGGGCCTGAGCAGCAAGGATGTGGAGAAGTCCTTGGTGGGAGAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CCA 72 bp | GGTCAGGGTCATCAAACAGCTTCAGGGAGTCCTGTGTaGTCTCCAGGGGTCTCCGGGTCTCAGACACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQGHQTASGSPV*SPGVSGSQTPS Trigger: AGAAGGTGTCTGAGACCCGGAGACCCCTGGAGACCACACAGGACTCCCTGAAGCTGTTTGATGACCCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CAA 72 bp | AACTGGACGACATCTTCGGGCCGGTGCTTGGCTGACTaGAACACAGCCAACCGGGTCACCACTAGGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NWTTSSGRCLAD*NTANRVTTRIW Trigger: CCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 ENSMUST00000220300.2 |
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| CDS CAA 72 bp | GAGACCAAGAACTGGACGACATCTTCGGGCCGGTGCTaGGCTGACTTGAACACAGCCAACCGGGTCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: ETKNWTTSSGRC*ADLNTANRVTT Trigger: AGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS CAA 90 bp | GAGACCAAGAACTGGACGACATCTTCGGGCCGGTGCTTGGCTGACTaGAACACAGCCAACCGGGTCACCACTAGGATCTGGTACTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ETKNWTTSSGRCLAD*NTANRVTTRIWYST Trigger: TGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS TCA 72 bp | CCAGGTTCAGAATCAGGTCCAGGTCCTCTTCAACTCTaGACAGCTCCTTGGAGGCATCCCCGTGTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSESGPGPLQL*TAPWRHPRVLG Trigger: GCCCAGAACACGGGGATGCCTCCAAGGAGCTGTTCAGAGTTGAAGAGGACCTGGACCTGATTCTGAACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS GCA 72 bp | TTAGAGACCAAGAACTGGACGACATCTTCGGGCCGGTaGTTGGCTGACTTGAACACAGCCAACCGGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LETKNWTTSSGR*LADLNTANRVT Trigger: GGTGACCCGGTTGGCTGTGTTCAAGTCAGCCAAGCACCGGCCCGAAGATGTCGTCCAGTTCTTGGTCTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS CCA 72 bp | GACTTGAACACAGCCAACCGGGTCACCACTAGGATCTaGTACTCCACATGGCCGGACATCATCTTACCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: DLNTANRVTTRI*YSTWPDIILPR Trigger: GCGGGGTAAGATGATGTCCGGCCATGTGGAGTACCAGATCCTAGTGGTGACCCGGTTGGCTGTGTTCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 |
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| CDS CCA 72 bp | CTAGCAGCTCTGGGCTGCCTGCCAACTGGGCATCCTTaGAGACACAGCGTAGGATCTCATCAAACATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAALGCLPTGHP*RHSVGSHQTWL Trigger: GAGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS CCA 72 bp | AGAAGTCAAAAGCCTCATCACTGTCCCCTGGCTGGCTaGCTGTGTCATCCAAGACAGAGGGATCTCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQKPHHCPLAG*LCHPRQRDLGW Trigger: CCACCCGAGATCCCTCTGTCTTGGATGACACAGCCAGCCAGCCAGGGGACAGTGATGAGGCTTTTGACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 ENSMUST00000220300.2 |
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| CDS CAA 90 bp | CCTAAGAATTCTAGCAGCTCTGGGCTGCCTGCCAACTGGGCATCCTaGGAGACACAGCGTAGGATCTCATCAAACATGGCTCGCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PKNSSSSGLPANWAS*ETQRRISSNMARLS Trigger: GGAGAGGCGAGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAGAATTCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS GCA 72 bp | CTCAGGCCCAGTGTGGGTGGCTGCACTTCATCCTGCTaGTCAAAGAAGTCAAAAGCCTCATCACTGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRPSVGGCTSSC*SKKSKASSLSP Trigger: AGGGGACAGTGATGAGGCTTTTGACTTCTTTGAGCAGCAGGATGAAGTGCAGCCACCCACACTGGGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS GCA 72 bp | TCCACATCCTTGCTGCTCAGGCCCAGTGTGGGTGGCTaGACTTCATCCTGCTGCTCAAAGAAGTCAAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: STSLLLRPSVGG*TSSCCSKKSKA Trigger: GGCTTTTGACTTCTTTGAGCAGCAGGATGAAGTGCAGCCACCCACACTGGGCCTGAGCAGCAAGGATGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS CCA 72 bp | CATCCTTGGAGACACAGCGTAGGATCTCATCAAACATaGCTCGCCTCTCCCGGATGTCAGACTCCCCGACAA | + |
|
Preference number: 6 (lower is better) Translates to: HPWRHSVGSHQT*LASPGCQTPRQ Trigger: TTGTCGGGGAGTCTGACATCCGGGAGAGGCGAGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
||
| CDS CCA 72 bp | AGGACTTCTCCACATCCTTGCTGCTCAGGCCCAGTGTaGGTGGCTGCACTTCATCCTGCTGCTCAAAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTSPHPCCSGPV*VAALHPAAQRS Trigger: ACTTCTTTGAGCAGCAGGATGAAGTGCAGCCACCCACACTGGGCCTGAGCAGCAAGGATGTGGAGAAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
||
| CDS CAA 72 bp | TCTAGCAGCTCTGGGCTGCCTGCCAACTGGGCATCCTaGGAGACACAGCGTAGGATCTCATCAAACATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSGLPANWAS*ETQRRISSNMA Trigger: AGCCATGTTTGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS GCA 72 bp | TCCATTTCATCCATAGCTTGGATCTGTTGCTGCTTCTaGGGTCCAGACCCAGGTTCTGACGGGCCCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: SISSIAWICCCF*GPDPGSDGPTD Trigger: ATCAGTGGGCCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS GCA 72 bp | AAGATGTCCATTTCATCCATAGCTTGGATCTGTTGCTaGTTCTGCGGTCCAGACCCAGGTTCTGACGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KMSISSIAWICC*FCGPDPGSDGP Trigger: GGGCCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CCA 72 bp | CCTAAGAATTCTAGCAGCTCTGGGCTGCCTGCCAACTaGGCATCCTTGGAGACACAGCGTAGGATCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: PKNSSSSGLPAN*ASLETQRRISS Trigger: TGATGAGATCCTACGCTGTGTCTCCAAGGATGCCCAGTTGGCAGGCAGCCCAGAGCTGCTAGAATTCTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS CCA 72 bp | TCAAAGAAGTCAAAAGCCTCATCACTGTCCCCTGGCTaGCTGGCTGTGTCATCCAAGACAGAGGGATCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SKKSKASSLSPG*LAVSSKTEGSR Trigger: CCGAGATCCCTCTGTCTTGGATGACACAGCCAGCCAGCCAGGGGACAGTGATGAGGCTTTTGACTTCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020927.10 ENSMUST00000220199.2 ENSMUST00000220300.2 |
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| CDS CCA 72 bp | CTTCTCCACATCCTTGCTGCTCAGGCCCAGTGTGGGTaGCTGCACTTCATCCTGCTGCTCAAAGAAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLHILAAQAQCG*LHFILLLKEVK Trigger: TTTGACTTCTTTGAGCAGCAGGATGAAGTGCAGCCACCCACACTGGGCCTGAGCAGCAAGGATGTGGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020927.10 ENSMUST00000220300.2 |
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| CDS GCA 72 bp | TGCAAGATGTCCATTTCATCCATAGCTTGGATCTGTTaGTGCTTCTGCGGTCCAGACCCAGGTTCTGACGGG | + |
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Preference number: 6 (lower is better) Translates to: CKMSISSIAWIC*CFCGPDPGSDG Trigger: CCCGTCAGAACCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CCA 72 bp | CAGAAGAGGCTGGGGGAGTCTTGGGCAAGTGTGTCATaGTCCCGGATATACTGCAAGATGTCCATTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: QKRLGESWASVS*SRIYCKMSISS Trigger: GGATGAAATGGACATCTTGCAGTATATCCGGGACCATGACACACTTGCCCAAGACTCCCCCAGCCTCTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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| CDS CAA 72 bp | CCGGATATACTGCAAGATGTCCATTTCATCCATAGCTaGGATCTGTTGCTGCTTCTGCGGTCCAGACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PDILQDVHFIHS*DLLLLLRSRPR Trigger: CCTGGGTCTGGACCGCAGAAGCAGCAACAGATCCAAGCTATGGATGAAATGGACATCTTGCAGTATATCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020927.10 |
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