Pregenerated sensors for HPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001249Ensembl transcript IDs: ENSMUST00000039435.15, ENSMUST00000108102.9, ENSMUST00000164929.3, ENSMUST00000165124.8, ENSMUST00000168884.8, ENSMUST00000171225.2, ENSMUST00000171259.2
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCATAGAACTGTGTGTTACCCCAGCCGGTCACAGTACAGACCTTaGCATCCACCAGGGCCTGTCCCGCAGCAGGGAGACACACTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GHRTVCYPSRSQYRP*HPPGPVPQQGDTLA Trigger: AGCCAGTGTGTCTCCCTGCTGCGGGACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGACCGGCTGGGGTAACACACAGTTCTATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 90 bp | ATTTACATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTaGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCTT | + |
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Preference number: 1 (lower is better) Translates to: IYMGWEGEANGPGIE*AGHCGREVLGSSIL Trigger: AAGGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCATGTAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR CCA 90 bp | CTTGAAGATCCACTCCCGGAAGTCAGTGACTTTGGTGTACACTCCTaGCTTCCGGGCCAAAGCACAGCCCGTACCCCAGCTTACAATGCC | + |
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Preference number: 1 (lower is better) Translates to: LEDPLPEVSDFGVHS*LPGQSTARTPAYNA Trigger: GGCATTGTAAGCTGGGGTACGGGCTGTGCTTTGGCCCGGAAGCCAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 90 bp | GCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCTTGGACCCGTaGACTGGATCTGAGCAGGAAACCATTCCATGTGAGGCCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: ATVEEKSLDPASLDP*TGSEQETIPCEAQC Trigger: ACACTGGGCCTCACATGGAATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR TCA 90 bp | CATCAATGCCACCCTCAGGATAGCCAGCACAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGTCGGGGCTGTTGCAAACTTCGTTGC | + |
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Preference number: 1 (lower is better) Translates to: HQCHPQDSQHRTSWA*SDSRRSRGCCKLRC Trigger: GCAACGAAGTTTGCAACAGCCCCGACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCTGTGCTGGCTATCCTGAGGGTGGCATTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 90 bp | CACACTGGCTGGATGTATTCTGTGAGAGGCAGGGAGCTAGAGAGGTaGACCAAGGCAATGTCATTGCTGTTTTCGTCGATAGTAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HTGWMYSVRGRELER*TKAMSLLFSSIVGS Trigger: AGACCCTACTATCGACGAAAACAGCAATGACATTGCCTTGGTCCACCTCTCTAGCTCCCTGCCTCTCACAGAATACATCCAGCCAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTCATGGGGTGGGAGGGTaGGGCCAATGGCCCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: EANGPGIEWAGHCGREVLHGVGG*GQWPWD Trigger: ATCCCAGGGCCATTGGCCTCACCCTCCCACCCCATG...AAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCCCTACCACGTGGGGCTaGAGCCACCAGACCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCPTTWG*SHQTNS Trigger: AGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGG...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGTACCCCAGCTTACAATGCCACATAGCCGCCACCTTGATGTCCCAGAGACAATGGCCCTGGGATTaGGTGGGCCGGCCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SPYPSLQCHIAATLMSQRQWPWD*VGRPLW Trigger: CCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTG...TCTCTGGGACATCAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTACGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCAAATACTCGCCACCGAGACAGGACCCGGTTCCGCTCTGGAAAGCAATGCCACCGGCAGCTTCCTaGGGCCACAGTCTTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TSKYSPPRQDPVPLWKAMPPAAS*GHSLGR Trigger: CCTGCCAAGACTGTGGCCGCAGGAAGCTGCCGGTGG...CATTGCTTTCCAGAGCGGAACCGGGTCCTGTCTCGGTGGCGAGTATTTGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR CCA 90 bp | CGAGACAGGACCCGGTTCCGCTCTGGAAAGCAATGTGCAGCAGTCAGCACCCAGCTGCGGCCACAGTCTTaGCAGGTGGCAGTCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RDRTRFRSGKQCAAVSTQLRPQS*QVAVRN Trigger: ATTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAG...CTGGGTGCTGACTGCTGCACATTGCTTTCCAGAGCGGAACCGGGTCCTGTCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CAA 90 bp | ATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTaGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: MALGLSGPATVEEKS*DPASLDPWTGSEQE Trigger: TTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACAATGGCCCTGGGATTaGGTGGGCCGGCCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKQWPWD*VGRPLW Trigger: CCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTG...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACAGAGTAATATTTACATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGCCTACCACGTGGGGCTaGAGCCACCAGACCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: RGQSNIYMGWEGEANGPGPTTWG*SHQTNS Trigger: AGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGG...CCCAGGGCCATTGGCCTCACCCTCCCACCCCATGTAAATATTACTCTGTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR CAA 90 bp | AGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCTaGGACCCGTGGACTGGATCTGAGCAGGAAACCATTCCATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SGPATVEEKSLDPAS*DPWTGSEQETIPCE Trigger: CTCACATGGAATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR TCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCCAATGGCCCTGGGATTaGGTGGGCCGGCCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: NHLYYLKSICTRGSLERPQWPWD*VGRPLW Trigger: CCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTG...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTAATATTTACATGGGGTaGGAGGGTGAGGCCAATGGC | + |
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Preference number: 2 (lower is better) Translates to: EANGPGIEWAGHCGREVLNIYMG*EGEANG Trigger: GCCATTGGCCTCACCCTCCCACCCCATGTAAATATT...AAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCGACACAGGAGAGGGGTaGCGACAGAAAGATAAATCA | + |
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Preference number: 2 (lower is better) Translates to: GPGIEWAGHCGREVLGSSDTGEG*RQKDKS Trigger: TGATTTATCTTTCTGTCGCCACCCCTCTCCTGTGTC...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR CCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCGGCCCTGGGATTGAGTaGGCCGGCCACTGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: NHLYYLKSICTRGSLERPGPGIE*AGHCGR Trigger: TCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR CAA 90 bp | GGGGCTGTTGCAAACTTCGTTGCTTATGATGGGAACCCGGGCCTCTaGGAGCACCATAGCCTGTTGGCCATAGAACTGTGTGTTACCCCA | + |
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Preference number: 2 (lower is better) Translates to: GAVANFVAYDGNPGL*EHHSLLAIELCVTP Trigger: TGGGGTAACACACAGTTCTATGGCCAACAGGCTATGGTGCTCCAAGAGGCCCGGGTTCCCATCATAAGCAACGAAGTTTGCAACAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: EANGPGIEWAGHCGREVLRTSWA*SDSRRS Trigger: ACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCT...AAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR CCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCCCTACCACGTGGGGCTaGAGCCACCAGACCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: NHLYYLKSICTRGSLERPPTTWG*SHQTNS Trigger: AGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGG...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCCCGGAAGTCAGTGACTTTGGTGTACACTCCTGGCTTCCGGGCCAAAGCAGGGGACCAGTTAGAATaGTATTTGGAGACCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: HSRKSVTLVYTPGFRAKAGDQLE*YLETCH Trigger: ATGGCAGGTCTCCAAATATCATTCTAACTGGTCCCC...TGCTTTGGCCCGGAAGCCAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 72 bp | GGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTaGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCC | + |
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Preference number: 3 (lower is better) Translates to: GWEGEANGPGIE*AGHCGREVLGS Trigger: GGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR CCA 72 bp | ATGCGGTCCACCGGCAGCTTCCTGCGGCCACAGTCTTaGCAGGTGGCAGTCAGGAATCGGCCTCTAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: MRSTGSFLRPQS*QVAVRNRPLGQ Trigger: CTGTCCTAGAGGCCGATTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAGGAAGCTGCCGGTGGACCGCAT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR GCA 72 bp | ACTGTGTGTTACCCCAGCCGGTCACAGTACAGACCTTaGCATCCACCAGGGCCTGTCCCGCAGCAGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: TVCYPSRSQYRP*HPPGPVPQQGD Trigger: GTCTCCCTGCTGCGGGACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGACCGGCTGGGGTAACACACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCCCTGCGGCCACAGTCTaGGCAGGTGGCAGTCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LGLSGPATVEEKSLDPASPAATV*AGGSQE Trigger: TTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAGG...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 72 bp | CCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTaGGGCTGGAGCCACCAGACCAACTCTGACTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PFHVRPSVEPTT*GWSHQTNSDSG Trigger: TCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR CCA 72 bp | ACCAGGGCCTGTCCCGCAGCAGGGAGACACACTGGCTaGATGTATTCTGTGAGAGGCAGGGAGCTAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TRACPAAGRHTG*MYSVRGRELER Trigger: CCTCTCTAGCTCCCTGCCTCTCACAGAATACATCCAGCCAGTGTGTCTCCCTGCTGCGGGACAGGCCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR TCA 72 bp | GATCACAGCCTGAACCCCCAGTTGCACAGCATGGGGTaGGGTCCGGGCTACAGCACCAGCAAATACTCGCCA | + |
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Preference number: 3 (lower is better) Translates to: DHSLNPQLHSMG*GPGYSTSKYSP Trigger: TGGCGAGTATTTGCTGGTGCTGTAGCCCGGACCTCACCCCATGCTGTGCAACTGGGGGTTCAGGCTGTGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR GCA 72 bp | TCCGGGCCAAAGCACAGCCCGTACCCCAGCTTACAATaGCACATAGCCGCCACCTTGATGTCCCAGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: SGPKHSPYPSLQ*HIAATLMSQRC Trigger: GCATCTCTGGGACATCAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTACGGGCTGTGCTTTGGCCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 72 bp | ATCCACCAGGGCCTGTCCCGCAGCAGGGAGACACACTaGCTGGATGTATTCTGTGAGAGGCAGGGAGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: IHQGLSRSRETH*LDVFCERQGAR Trigger: TCTAGCTCCCTGCCTCTCACAGAATACATCCAGCCAGTGTGTCTCCCTGCTGCGGGACAGGCCCTGGTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCGTGGAAGAGAAGTCCTaGGATCCAGCATCCTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: GPGIEWAGHCGREVLGSSVEEKS*DPASLD Trigger: GTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCAC...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCCGTACCCCAGCTTACAATGCCACATAGCCGCCACCTTGATGTCCCAGAGAGTCACAGTACAGACCTaGCCATCCACCAGGGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: SPYPSLQCHIAATLMSQRVTVQT*PSTRAC Trigger: ACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGAC...TCTCTGGGACATCAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTACGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAAGTGGAAGAGAAGTCCTaGGATCCAGCATCCTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKVEEKS*DPASLD Trigger: GTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCAC...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR TCA 72 bp | CACCCTCAGGATAGCCAGCACAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGTCGGGGCTGTTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: HPQDSQHRTSWA*SDSRRSRGCCK Trigger: TTTGCAACAGCCCCGACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCTGTGCTGGCTATCCTGAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 72 bp | GAAGAGAAGTCCTTGGATCCAGCATCCTTGGACCCGTaGACTGGATCTGAGCAGGAAACCATTCCATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: EEKSLDPASLDP*TGSEQETIPCE Trigger: CTCACATGGAATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAGTCTTTATGGCCTTGAAGATCCACTCCCGGAAGTCAGTGACTTTGGTGTAGTGGAAGAGAAGTCCTaGGATCCAGCATCCTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: VSLYGLEDPLPEVSDFGVVEEKS*DPASLD Trigger: GTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCAC...TACACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAGGCCATAAAGACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR TCA 72 bp | TGGCGACAGAAAGATAAATCAGGGGACCAGTTAGAATaGTATTTGGAGACCTGCCATTACCACCCGCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: WRQKDKSGDQLE*YLETCHYHPQP Trigger: CGGCTGCGGGTGGTAATGGCAGGTCTCCAAATATCATTCTAACTGGTCCCCTGATTTATCTTTCTGTCGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| 3UTR CCA 72 bp | TGGATGTATTCTGTGAGAGGCAGGGAGCTAGAGAGGTaGACCAAGGCAATGTCATTGCTGTTTTCGTCGATA | + |
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Preference number: 3 (lower is better) Translates to: WMYSVRGRELER*TKAMSLLFSSI Trigger: TATCGACGAAAACAGCAATGACATTGCCTTGGTCCACCTCTCTAGCTCCCTGCCTCTCACAGAATACATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| CDS-3UTR GCA 90 bp | TGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGCTCACAGCCGAGCCCTaGCACCCTGGCATTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: WGGRVRPMALGLSGPATVLTAEP*HPGIGA Trigger: CGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAG...CACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | TGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGAGGACGCGGCCCCAATaGCTGTCAGGAACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WGGRVRPMALGLSGPATVRTRPQ*LSGTAG Trigger: CCCTGCTGTTCCTGACAGGCATTGGGGCCGCGTCCT...CACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGGTCTGGAGCAGCATaGTGCAGTCCGGCCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: MGWEGEANGPGIEWAGHCGSGAA*CSPATL Trigger: GAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCC...ACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | TGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGCCCAGGTTCCTCATCTaGCATGTGCCCAGCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGGRVRPMALGLSGPATVPRFLI*HVPSVV Trigger: GACGACGCTGGGCACATGGCAGATGAGGAACCTGGG...CACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039435.15 |
||
| CDS-3UTR GCA 90 bp | ATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCGTTGGCGCCCGCAGTaGGCACATCCAGCTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPCEAQCGAYHVGLEPPDRWRPQ*AHPAPS Trigger: ACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACG...GTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTTCTGGAGCAGCATGCTaGAGTCCGGCCACCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGEANGPGIEWAGHCSGAAC*SPATLL Trigger: AAGGAGGGTGGCCGGACTGCAGCATGCTGCTCCAGA...ACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCGGGTCTGGAGCAGCATaGTGCAGTCCGGCCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCGSGAA*CSPATL Trigger: GAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCC...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | CCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGAGTGCGCCAGAGCCCTaGGAAAGCCCATCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFHVRPSVEPTTWGWSHQSAPEP*ESPSPH Trigger: GTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACT...CTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | CATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACCATCATAACGCAGGCTaGCCTGCCACGGCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVRPSVEPTTWGWSHQTNHHNAG*PATATF Trigger: GAAGGTGGCCGTGGCAGGTCAGCCTGCGTTATGATG...GTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | CGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGGGGTCTGGAGCAGCATaGTGCAGTCCGGCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGAGATRPTLTLDASAARGSGAA*CSPATL Trigger: AAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCC...CCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCAGGACGCGGCCCCAATaGCTGTCAGGAACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCRTRPQ*LSGTAG Trigger: CCCTGCTGTTCCTGACAGGCATTGGGGCCGCGTCCT...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | GGTGAGGTCCGGGCTACAGCACCAGCAAATACTCGCCACCGAGACAGGACCCGGAAAAGAAGCCCGATGTaGCGTTGGCGCCCGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEVRATAPANTRHRDRTRKRSPM*RWRPQC Trigger: GCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTT...CCGGGTCCTGTCTCGGTGGCGAGTATTTGCTGGTGCTGTAGCCCGGACCTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGAAAAGAAGCCCGATGTaGCGTTGGCGCCCGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFHVRPSVEPTTWGWSHQKRSPM*RWRPQC Trigger: GCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTT...CTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGCCACCGGCAGCTTCCTaGGGCCACAGTCTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPMALGLSGPATVEEKSLPPAAS*GHSLGR Trigger: CCTGCCAAGACTGTGGCCGCAGGAAGCTGCCGGTGG...CAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGACCACCGGCAGCTTCCTaGGGCCACAGTCTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVEPTTWGWSHQTNSDSGPPAAS*GHSLGR Trigger: CCTGCCAAGACTGTGGCCGCAGGAAGCTGCCGGTGG...TCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTCTGCCACCCTGGCATTaGAGCGTGAGGAGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGEANGPGIEWAGHCLPPWH*SVRSTV Trigger: TACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAG...ACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTCTGCGGCCACAGTCTTaGCAGGTGGCAGTCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGEANGPGIEWAGHCLRPQS*QVAVRN Trigger: ATTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAG...ACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | CAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGACATCCAGCAACCTCTaGGCCAGAGGCAGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QETIPCEAQCGAYHVGLETSSNL*ARGSPP Trigger: GGGCGGACTGCCTCTGGCTCAGAGGTTGCTGGATGT...CTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGAAGGACGCGGCCCCAATaGCTGTCAGGAACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVEPTTWGWSHQTNSDSGRTRPQ*LSGTAG Trigger: CCCTGCTGTTCCTGACAGGCATTGGGGCCGCGTCCT...TCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTCACTCTGCAGTAGGATaGTCACAATGGCCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MGWEGEANGPGIEWAGHCHSAVG*SQWPRT Trigger: CGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTG...ACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | CCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGCTGCCACCCTGGCATTaGAGCGTGAGGAGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFHVRPSVEPTTWGWSHQLPPWH*SVRSTV Trigger: TACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAG...CTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | GCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGAGCAGCGCAGGGTACCCACAATaGGAGCTGCCACCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGATRPTLTLDASAARSSAGYPQ*ELPPWV Trigger: GACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGC...GCTGCTCCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTAGTGCGCCAGAGCCCTaGGAAAGCCCATCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EANGPGIEWAGHCGREVLSAPEP*ESPSPH Trigger: GTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACT...AAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGCATCATAACGCAGGCTaGCCTGCCACGGCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPMALGLSGPATVEEKSLHHNAG*PATATF Trigger: GAAGGTGGCCGTGGCAGGTCAGCCTGCGTTATGATG...CAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | TGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGAAGCCTTTATGGCCTTaGAGATCCACTCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WGGRVRPMALGLSGPATVKPLWP*RSTPGS Trigger: ACTTCCGGGAGTGGATCTTCAAGGCCATAAAGGCTT...CACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171225.2 |
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| CDS-3UTR GCA 90 bp | GAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCATCTGGAGCAGCATGCTaGAGTCCGGCCACCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETIPCEAQCGAYHVGLEPSGAAC*SPATLS Trigger: GGAAAGGGTGGCCGGACTGCAGCATGCTGCTCCAGA...TGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
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| CDS-3UTR GCA 90 bp | GCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCTGGAGCAGCATGCTaGAGTCCGGCCACCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANGPGIEWAGHCGREVLGSGAAC*SPATLS Trigger: GGAAAGGGTGGCCGGACTGCAGCATGCTGCTCCAGA...TCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
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| CDS-3UTR GCA 90 bp | CGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGAGGGCTGAGTCACCATaGCACTGGCTTCGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGAGATRPTLTLDASAARRAESP*HWLRSE Trigger: CTCACTCCGAAGCCAGTGGCATGGTGACTCAGCCCT...CCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | GCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCTGGAGCAGCATGCTaGAGTCCGGCCACCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANGPGIEWAGHCGREVLGSGAAC*SPATLL Trigger: AAGGAGGGTGGCCGGACTGCAGCATGCTGCTCCAGA...TCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCCTGCCACCCTGGCATTaGAGCGTGAGGAGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCLPPWH*SVRSTV Trigger: TACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAG...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCCTGCGGCCACAGTCTTaGCAGGTGGCAGTCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCLRPQS*QVAVRN Trigger: ATTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAG...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| 3UTR CAA 72 bp | AACTGTGTGTTACCCCAGCCGGTCACAGTACAGACCTaGCCATCCACCAGGGCCTGTCCCGCAGCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NCVLPQPVTVQT*PSTRACPAAGR Trigger: TCTCCCTGCTGCGGGACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGACCGGCTGGGGTAACACACAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| CDS-3UTR TCA 90 bp | ATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCAGGGTACCCACAATaGGAGCTGCCACCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MALGLSGPATVEEKSLDPAGYPQ*ELPPWV Trigger: GACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGC...TGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | CCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATGTGGAACCTCCTCTGTaGGCCCCAGGTTCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PMALGLSGPATVEEKSLDVEPPL*APGSSS Trigger: GGATGAGGAACCTGGGGCTCACAGAGGAGGTTCCAC...ATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108102.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACAGAGTAATATTTACATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGACTCACAGCCGAGCCCTaGCACCCTGGCATTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDRVIFTWGGRVRPMALGLTAEP*HPGIGA Trigger: CGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAG...TCCCAGGGCCATTGGCCTCACCCTCCCACCCCATGTAAATATTACTCTGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCACTCACAGCCGAGCCCTaGCACCCTGGCATTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPWIQHPWTRGLDLSRKPLTAEP*HPGIGA Trigger: CGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAG...TGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCATTCCCACCGGCAGCTTCCTaGGGCCACAGTCTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWIQHPWTRGLDLSRKPFPPAAS*GHSLGR Trigger: CCTGCCAAGACTGTGGCCGCAGGAAGCTGCCGGTGG...GAATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR GCA 90 bp | GCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGAGCAGCAGGGCTGAGTCACCATaGCACTGGCTTCGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGATRPTLTLDASAARSSRAESP*HWLRSE Trigger: CTCACTCCGAAGCCAGTGGCATGGTGACTCAGCCCT...GCTGCTCCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCGGGGTCTTGAACAAGTaGAACCTCCTCTGTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGIEWAGHCGREVLGSSGVLNK*NLLCEP Trigger: GGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCC...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCCTGCCACCTTGGGTCTaGAGCAGCATGCTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASLPPWV*SSMLQS Trigger: GGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAG...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCGGACTGAGCTGCACTTaGTACAGTGGCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCGLSCT*YSGSWS Trigger: TGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCC...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTCTGCGGCCACAGTCTTaGCAGGTGGCAGTCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSLPRGAGATRPTLTLDALRPQS*QVAVRN Trigger: ATTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAG...AGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCGTACCCCAGCTTACAATGCCACATAGCCGCCACCTTGATGTCCCAGAGAAGTGCGCCAGAGCCCTaGGAAAGCCCATCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPYPSLQCHIAATLMSQRSAPEP*ESPSPH Trigger: GTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACT...TCTCTGGGACATCAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTACGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGGACAGAGTAATATTTACATGGGGTGGGAGGGTGAGGCCAATGGCCCTACATCCAGCAACCTCTaGGCCAGAGGCAGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGQSNIYMGWEGEANGPTSSNL*ARGSPP Trigger: GGGCGGACTGCCTCTGGCTCAGAGGTTGCTGGATGT...AGGGCCATTGGCCTCACCCTCCCACCCCATGTAAATATTACTCTGTCCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTTATGATGGGAACCCGGGCCTCTTGGAGCACCATAGCCTGTTGGCCATAACATCCAGCAACCTCTaGGCCAGAGGCAGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAYDGNPGLLEHHSLLAITSSNL*ARGSPP Trigger: GGGCGGACTGCCTCTGGCTCAGAGGTTGCTGGATGT...TATGGCCAACAGGCTATGGTGCTCCAAGAGGCCCGGGTTCCCATCATAAGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCACTCCCGGAAGTCAGTaGCTTTGGTGTACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGIEWAGHCGREVLGSSTPGSQ*LWCTLL Trigger: CAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGT...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171225.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCCCACTGGCTTCGGAGTaGGTCTTTATGGCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGIEWAGHCGREVLGSSPLASE*VFMALK Trigger: CTTCAAGGCCATAAAGACTCACTCCGAAGCCAGTGG...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACTCACAGCCGAGCCCTaGCACCCTGGCATTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKLTAEP*HPGIGA Trigger: CGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAG...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGAGCAGCTCACAGTACAGACCTTaGCATCCACCAGGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGATRPTLTLDASAARSSSQYRP*HPPGPV Trigger: GACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGA...GCTGCTCCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCTACCCCAGCTTACAATaGCACATAGCCGCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGIEWAGHCGREVLGSSYPSLQ*HIAATL Trigger: CAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTA...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | GCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGACACTCTGCAGTAGGATaGTCACAATGGCCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: ANGPGIEWAGHCGREVLGHSAVG*SQWPRT Trigger: CGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTG...TCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGACTGCACTTGGTACAGTaGCTCCTGGTCACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVEPTTWGWSHQTNSDSGLHLVQ*LLVTLQ Trigger: CTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAG...TCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCTGCACTTGGTACAGTaGCTCCTGGTCACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QETIPCEAQCGAYHVGLELHLVQ*LLVTLQ Trigger: CTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAG...CTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGATGTATTCTGTGAGAGGCAGGGAGCTAGAGAGGTGGACCAAGGCAATGGCAGGGTACCCACAATaGGAGCTGCCACCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWMYSVRGRELERWTKAMAGYPQ*ELPPWV Trigger: GACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGC...CATTGCCTTGGTCCACCTCTCTAGCTCCCTGCCTCTCACAGAATACATCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCATTCAGTGCGCCAGAGCCCTaGGAAAGCCCATCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PWIQHPWTRGLDLSRKPFSAPEP*ESPSPH Trigger: GTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACT...GAATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCGAGTCTTTATGGCCTTaGAGATCCACTCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCESLWP*RSTPGS Trigger: ACTTCCGGGAGTGGATCTTCAAGGCCATAAAGACTC...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | GAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCACTGGCTTCGGAGTaGGTCTTTATGGCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETIPCEAQCGAYHVGLEPPLASE*VFMALK Trigger: CTTCAAGGCCATAAAGACTCACTCCGAAGCCAGTGG...TGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCTCACAGTACAGACCTTaGCATCCACCAGGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASSQYRP*HPPGPV Trigger: GACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGA...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCCACTCTGCAGTAGGATaGTCACAATGGCCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASHSAVG*SQWPRT Trigger: CGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTG...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCCTGCACTTGGTACAGTaGCTCCTGGTCACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASLHLVQ*LLVTLQ Trigger: CTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAG...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | CCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATGGACTGAGCTGCACTTaGTACAGTGGCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PMALGLSGPATVEEKSLDGLSCT*YSGSWS Trigger: TGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCC...ATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGGGGAGACACACTGGCTaGATGTATTCTGTGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QETIPCEAQCGAYHVGLEGRHTG*MYSVRG Trigger: GCCTCTCACAGAATACATCCAGCCAGTGTGTCTCCC...CTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGAGCAGCGGGAGACACACTGGCTaGATGTATTCTGTGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGATRPTLTLDASAARSSGRHTG*MYSVRG Trigger: GCCTCTCACAGAATACATCCAGCCAGTGTGTCTCCC...GCTGCTCCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGATCTGAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGAACCTCCTCTGTaGGCCCCAGGTTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TGSEQETIPCEAQCGAYHVEPPL*APGSSS Trigger: AGATGAGGAACCTGGGGCTCACAGAGGAGGTTCCAC...GTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTCAGATCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039435.15 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACATCATAACGCAGGCTaGCCTGCCACGGCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKHHNAG*PATATF Trigger: GAAGGTGGCCGTGGCAGGTCAGCCTGCGTTATGATG...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAAAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCEAQCGAYHVGLEPPDQRTSWA*SDSRRS Trigger: ACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCT...TTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | CCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATACTCCCGGAAGTCAGTaGCTTTGGTGTACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PMALGLSGPATVEEKSLDTPGSQ*LWCTLL Trigger: CAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGT...ATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171225.2 |
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| CDS-3UTR TCA 90 bp | GAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGAGTCTTTATGGCCTTaGAGATCCACTCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EANGPGIEWAGHCGREVLESLWP*RSTPGS Trigger: ACTTCCGGGAGTGGATCTTCAAGGCCATAAAGACTC...AAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | ATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCACCACTGGCTTCGGAGTaGGTCTTTATGGCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MALGLSGPATVEEKSLDPPLASE*VFMALK Trigger: CTTCAAGGCCATAAAGACTCACTCCGAAGCCAGTGG...TGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | CACTCCCGGAAGTCAGTGACTTTGGTGTACACTCCTGGCTTCCGGGCCAAAGCACTGCACTTGGTACAGTaGCTCCTGGTCACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSRKSVTLVYTPGFRAKALHLVQ*LLVTLQ Trigger: CTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAG...TGCTTTGGCCCGGAAGCCAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| CDS-3UTR CCA 90 bp | GCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGAAGCAGGGAGACACACTaGCTGGATGTATTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANGPGIEWAGHCGREVLGSRETH*LDVFCE Trigger: CTCACAGAATACATCCAGCCAGTGTGTCTCCCTGCT...TCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGAGCAGGGAGACACACTaGCTGGATGTATTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQETIPCEAQCGAYHVGLSRETH*LDVFCE Trigger: CTCACAGAATACATCCAGCCAGTGTGTCTCCCTGCT...CAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGAGAGTCACCATGCCACTaGCTTCGGAGTGAGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVEPTTWGWSHQTNSDSGESPCH*LRSESL Trigger: TAAAGACTCACTCCGAAGCCAGTGGCATGGTGACTC...TCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR TCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCACATCCAGCAACCTCTaGGCCAGAGGCAGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPTSSNL*ARGSPP Trigger: GGGCGGACTGCCTCTGGCTCAGAGGTTGCTGGATGT...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTCACATACAGAGATaGCATCCAGCAACCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSLPRGAGATRPTLTLDASHIQR*HPATSE Trigger: CTCAGAGGTTGCTGGATGTCATCTCTGTATGTGACT...AGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCAAACTTCGTTGCTTATaGTGGGAACCCGGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASKLRCL*WEPGPL Trigger: AAGAGGCCCGGGTTCCCATCATAAGCAACGAAGTTT...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTTGATGTCCCAGAGATaGTGTCTTCACACACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCLMSQR*CLHTQR Trigger: CCTTTGTGTGTGAAGACAGCATCTCTGGGACATCAA...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR CCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCCCACCCTTTCCAGGTTaGGGTCTTGAACAAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASPPFPG*GLEQVE Trigger: TTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGG...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCCACTCTGCAGTAGGATaGTCACAATGGCCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KSLDPASLDPWTGSEQETHSAVG*SQWPRT Trigger: CGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTG...GGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCACCATAGCCTGTTGGCCATAGAACTGTGTGTTACCCCAGCCGGTCACGGACTGAGCTGCACTTaGTACAGTGGCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEHHSLLAIELCVTPAGHGLSCT*YSGSWS Trigger: TGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCC...GTGACCGGCTGGGGTAACACACAGTTCTATGGCCAACAGGCTATGGTGCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCAGGACTGAGCTGCACTTaGTACAGTGGCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPWIQHPWTRGLDLSRKPGLSCT*YSGSWS Trigger: TGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCC...TGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| 3UTR CAA 72 bp | ATGGCCTTGAAGATCCACTCCCGGAAGTCAGTGACTTaGGTGTACACTCCTGGCTTCCGGGCCAAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MALKIHSRKSVT*VYTPGFRAKAQ Trigger: CTGTGCTTTGGCCCGGAAGCCAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR TCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCGCAGGGTACCCACAATaGGAGCTGCCACCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPAGYPQ*ELPPWV Trigger: GACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGC...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCAGTCACATACAGAGATaGCATCCAGCAACCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSGPATVEEKSLDPASSHIQR*HPATSE Trigger: CTCAGAGGTTGCTGGATGTCATCTCTGTATGTGACT...GGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCACTCCCGGAAGTCAGTaGCTTTGGTGTACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLDPASLDPWTGSEQETTPGSQ*LWCTLL Trigger: CAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGT...GGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171225.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCATGGGGTGGGAGGGTaGGGCCAATGGCCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERHGVGG*GQWPWD Trigger: ATCCCAGGGCCATTGGCCTCACCCTCCCACCCCATG...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
||
| CDS-3UTR GCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCGTTGGCGCCCGCAGTaGGCACATCCAGCTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERRWRPQ*AHPAPS Trigger: ACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACG...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCAAAAGAAGCCCGATGTaGCGTTGGCGCCCGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPKRSPM*RWRPQC Trigger: GCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTT...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | GCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATTGATGTCCCAGAGATaGTGTCTTCACACACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANGPGIEWAGHCGREVLGLMSQR*CLHTQR Trigger: CCTTTGTGTGTGAAGACAGCATCTCTGGGACATCAA...TCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGATCTGAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACTACCCCAGCTTACAATaGCACATAGCCGCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSEQETIPCEAQCGAYHYPSLQ*HIAATL Trigger: CAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTA...GTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTCAGATCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAAGGGGTCTTGAACAAGTaGAACCTCCTCTGTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKGVLNK*NLLCEP Trigger: GGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCC...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCGGGAGACACACTGGCTaGATGTATTCTGTGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSLDPASLDPWTGSEQETGRHTG*MYSVRG Trigger: GCCTCTCACAGAATACATCCAGCCAGTGTGTCTCCC...GGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCGGCCCTGGGATTGAGTaGGCCGGCCACTGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPGPGIE*AGHCGR Trigger: TCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
||
| 3UTR CAA 72 bp | GCCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCTaGGACCCGTGGACTGGATCTGAGCAGGAAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: ATVEEKSLDPAS*DPWTGSEQETI Trigger: AATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCACAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 ENSMUST00000171225.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGATCTGAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACAAACTTCGTTGCTTATaGTGGGAACCCGGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSEQETIPCEAQCGAYHKLRCL*WEPGPL Trigger: AAGAGGCCCGGGTTCCCATCATAAGCAACGAAGTTT...GTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTCAGATCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAAACTCCCGGAAGTCAGTaGCTTTGGTGTACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKTPGSQ*LWCTLL Trigger: CAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGT...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171225.2 |
||
| CDS-3UTR GCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCGGGTCTGGAGCAGCATaGTGCAGTCCGGCCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERGSGAA*CSPATL Trigger: AAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCC...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCAGGACGCGGCCCCAATaGCTGTCAGGAACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERRTRPQ*LSGTAG Trigger: CCCTGCTGTTCCTGACAGGCATTGGGGCCGCGTCCT...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCAGGGCTGAGTCACCATaGCACTGGCTTCGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPRAESP*HWLRSE Trigger: CTCACTCCGAAGCCAGTGGCATGGTGACTCAGCCCT...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGACAGAGTAATATTTACATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGCCACCCTTTCCAGGTTaGGGTCTTGAACAAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQSNIYMGWEGEANGPGPPFPG*GLEQVE Trigger: TTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGG...CCCAGGGCCATTGGCCTCACCCTCCCACCCCATGTAAATATTACTCTGTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCATTCAGCAGGGAGACACACTaGCTGGATGTATTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PWIQHPWTRGLDLSRKPFSRETH*LDVFCE Trigger: CTCACAGAATACATCCAGCCAGTGTGTCTCCCTGCT...GAATGGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| 3UTR CAA 72 bp | GGCAGGGAGCTAGAGAGGTGGACCAAGGCAATGTCATaGCTGTTTTCGTCGATAGTAGGGTCTCGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRELERWTKAMS*LFSSIVGSRKG Trigger: TCCCTTTCGAGACCCTACTATCGACGAAAACAGCAATGACATTGCCTTGGTCCACCTCTCTAGCTCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
||
| CDS-3UTR GCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCAAAAGAAGCCCGATGTaGCGTTGGCGCCCGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERKRSPM*RWRPQC Trigger: GCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTT...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCTCACAGTACAGACCTTaGCATCCACCAGGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPSQYRP*HPPGPV Trigger: GACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGA...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAAAGTCACATACAGAGATaGCATCCAGCAACCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKSHIQR*HPATSE Trigger: CTCAGAGGTTGCTGGATGTCATCTCTGTATGTGACT...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGAGTAATATTTACATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGAAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDRVIFTWGGRVRPMALGRTSWA*SDSRRS Trigger: ACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCT...TCCCAGGGCCATTGGCCTCACCCTCCCACCCCATGTAAATATTACTCTGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCTCACAGTACAGACCTTaGCATCCACCAGGGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPSQYRP*HPPGPV Trigger: GACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGA...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAACCTTGATGTCCCAGAGATaGTGTCTTCACACACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLDPASLDPWTGSEQETLMSQR*CLHTQR Trigger: CCTTTGTGTGTGAAGACAGCATCTCTGGGACATCAA...GGTTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR GCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCTACCCCAGCTTACAATaGCACATAGCCGCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPYPSLQ*HIAATL Trigger: CAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTA...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR CCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCTGCCACCCTGGCATTaGAGCGTGAGGAGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERLPPWH*SVRSTV Trigger: TACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAG...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAAAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKRTSWA*SDSRRS Trigger: ACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCT...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCGAGTCTTTATGGCCTTaGAGATCCACTCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPESLWP*RSTPGS Trigger: ACTTCCGGGAGTGGATCTTCAAGGCCATAAAGACTC...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCTGGACTTTATGGCCTTaGAGATCCACTCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPWTLWP*RSTPGS Trigger: ACTTCCGGGAGTGGATCTTCAAGGCCATAAAGTCCA...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
||
| CDS-3UTR GCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCTACCCCAGCTTACAATaGCACATAGCCGCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPYPSLQ*HIAATL Trigger: CAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTA...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR CCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCGGGAGACACACTGGCTaGATGTATTCTGTGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPGRHTG*MYSVRG Trigger: GCCTCTCACAGAATACATCCAGCCAGTGTGTCTCCC...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR CCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCGAGTCACCATGCCACTaGCTTCGGAGTGAGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPESPCH*LRSESL Trigger: TAAAGACTCACTCCGAAGCCAGTGGCATGGTGACTC...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR TCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCACTCCCGGAAGTCAGTaGCTTTGGTGTACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERTPGSQ*LWCTLL Trigger: CAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGT...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171225.2 ENSMUST00000171259.2 |
||
| CDS-3UTR CCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCAGCAGGGAGACACACTaGCTGGATGTATTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPSRETH*LDVFCE Trigger: CTCACAGAATACATCCAGCCAGTGTGTCTCCCTGCT...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR CCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCGAGTCACCATGCCACTaGCTTCGGAGTGAGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPESPCH*LRSESL Trigger: TAAAGACTCACTCCGAAGCCAGTGGCATGGTGACTC...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCTGGAAGAGAAGTCCTTaGATCCAGCATCCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPWKRSP*IQHPWT Trigger: GGTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCA...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCAAACTTCGTTGCTTATaGTGGGAACCCGGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNHLYYLKSICTRGSLERKLRCL*WEPGPL Trigger: AAGAGGCCCGGGTTCCCATCATAAGCAACGAAGTTT...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR TCA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCAGAACATCTTGGGCTTaGTCTGATTCCCGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NHLYYLKSICTRGSLERPRTSWA*SDSRRS Trigger: ACTTCTACGGGAATCAGATCAAGCCCAAGATGTTCT...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS-3UTR GCA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCTTGATGTCCCAGAGATaGTGTCTTCACACACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPLMSQR*CLHTQR Trigger: CCTTTGTGTGTGAAGACAGCATCTCTGGGACATCAA...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
||
| CDS CCA 90 bp | GAGGCAGTCCGCCCTCGTCCACGCAAAAGAAGCCCGATGTGCCGTTaGCGCCCGCAGTGCGCACATCCAGCTCCGAGTGCGCCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAVRPRPRKRSPMCR*RPQCAHPAPSAPEP Trigger: GGGCTCTGGCGCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGACGAGGGCGGACTGCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS TCA 90 bp | TGGCGCCCGCAGTGCGCACATCCAGCTCCGAGTGCGCCAGAGCCCTaGGAAAGCCCATCTCCTCACAGCCGAGCCCTGCCACCCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WRPQCAHPAPSAPEP*ESPSPHSRALPPWH Trigger: ATGCCAGGGTGGCAGGGCTCGGCTGTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS GCA 90 bp | GAGCCAGAGGCAGTCCGCCCTCGTCCACGCAAAAGAAGCCCGATGTaGCGTTGGCGCCCGCAGTGCGCACATCCAGCTCCGAGTGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPEAVRPRPRKRSPM*RWRPQCAHPAPSAP Trigger: TGGCGCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGACGAGGGCGGACTGCCTCTGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGCCTGCGGCCACAGTCTaGGCAGGTGGCAGTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WGGRVRPMALGLSGPATVPAATV*AGGSQE Trigger: TTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAGG...CACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGTGGACTGAGCTGCACTaGGTACAGTGGCTCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WGGRVRPMALGLSGPATVWTELH*VQWLLV Trigger: GACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCCA...CACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS TCA 90 bp | AGGACGCGGCCCCAATGCCTGTCAGGAACAGCAGGGTACCCACAATaGGAGCTGCCACCTTGGGTCTGGAGCAGCATGCTGCAGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRPQCLSGTAGYPQ*ELPPWVWSSMLQSG Trigger: GCCGGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCTGACAGGCATTGGGGCCGCGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS GCA 90 bp | GGCCCCAATGCCTGTCAGGAACAGCAGGGTACCCACAATGAGAGCTaGCACCTTGGGTCTGGAGCAGCATGCTGCAGTCCGGCCACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPNACQEQQGTHNES*HLGSGAACCSPATL Trigger: GAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCTGACAGGCATTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | CGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGCCTGCGGCCACAGTCTaGGCAGGTGGCAGTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGAGATRPTLTLDASAARPAATV*AGGSQE Trigger: TTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAGG...CCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS GCA 90 bp | GGCCCCAATGCCTGTCAGGAACAGCAGGGTACCCACAATGAGAGCTaGCACCTTGGGTCTGGAGCAGCATGCTGCAGTCCGGCCACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPNACQEQQGTHNES*HLGSGAACCSPATL Trigger: AAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCTGACAGGCATTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
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| CDS-3UTR CAA 90 bp | AGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGACCTGCCACCCTGGCATaGGAGCGTGAGGAGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVEPTTWGWSHQTNSDSGPATLA*EREEHS Trigger: ACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGG...TCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGCCTGCCACCCTGGCATaGGAGCGTGAGGAGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: RPMALGLSGPATVEEKSLPATLA*EREEHS Trigger: ACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGG...CAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTCCTGCCACCCTGGCATaGGAGCGTGAGGAGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: WSLPRGAGATRPTLTLDAPATLA*EREEHS Trigger: ACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGG...AGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGCCTGCCACCCTGGCATaGGAGCGTGAGGAGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: EQETIPCEAQCGAYHVGLPATLA*EREEHS Trigger: ACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGG...CAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CAA 90 bp | CCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCACCAGGTCACAGTACAGACCTaGCCATCCACCAGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PFHVRPSVEPTTWGWSHQVTVQT*PSTRAC Trigger: ACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGAC...CTGGTGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS GCA 90 bp | TCCCCTGGACTGAGCTGCACTTGGTACAGTGGCTCCTGGTCACTCTaGAGTAGGATGGTCACAATGGCCCAGGACGCGGCCCCAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSCTWYSGSWSL*SRMVTMAQDAAPMP Trigger: AGGCATTGGGGCCGCGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCCAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGCCTACCACGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCGTCACAGTACAGACCTaGCCATCCACCAGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VEPTTWGWSHQTNSDSGCVTVQT*PSTRAC Trigger: ACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGAC...GCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACGTGGTAGGCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
||
| CDS CCA 90 bp | CTTGGTACAGTGGCTCCTGGTCACTCTGCAGTAGGATGGTCACAATaGCCCAGGACGCGGCCCCAATGCCTGTCAGGAACAGCAGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGTVAPGHSAVGWSQ*PRTRPQCLSGTAGY Trigger: GTACCCTGCTGTTCCTGACAGGCATTGGGGCCGCGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTGACCAGGAGCCACTGTACCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | GCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ANGPGIEWAGHCGREVLGMRAAT*GLEQHA Trigger: AGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCAT...TCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | GAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAGCCAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETIPCEAQCGAYHVGLEPMRAAT*GLEQHA Trigger: AGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCAT...TGGCTCCAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CCA 90 bp | ATGCTGCAGTCCGGCCACCCTTTCCAGGTTGGGGTCTTGAACAAGTaGAACCTCCTCTGTGAGCCCCAGGTTCCTCATCCTCCTTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MLQSGHPFQVGVLNK*NLLCEPQVPHPPSP Trigger: TGGCGAAGGAGGATGAGGAACCTGGGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGGCCGGACTGCAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108102.9 |
||
| CDS CCA 90 bp | ATGCTGCAGTCCGGCCACCCTTTCCAGGTTGGGGTCTTGAACAAGTaGAACCTCCTCTGTGAGCCCCAGGTTCCTCATCTGCGGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: MLQSGHPFQVGVLNK*NLLCEPQVPHLRPC Trigger: ACATGGCCGCAGATGAGGAACCTGGGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGGCCGGACTGCAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164929.3 |
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| CDS-3UTR CAA 90 bp | ACTGGATCTGAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACCCTGCGGCCACAGTCTaGGCAGGTGGCAGTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGSEQETIPCEAQCGAYHPAATV*AGGSQE Trigger: TTCCTGACTGCCACCTGCCAAGACTGTGGCCGCAGG...GTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTCAGATCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS TCA 90 bp | TTCCCTCCGTCTTGTCAAACACCGCAAGCCGTGAGTCCCCTGGACTaGGCTGCACTTGGTACAGTGGCTCCTGGTCACTCTGCAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPPSCQTPQAVSPLD*AALGTVAPGHSAVG Trigger: TCCTACTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCCAGGGGACTCACGGCTTGCGGTGTTTGACAAGACGGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS TCA 90 bp | CGGCCTCTAGGACAGTCACATACAGAGATGACATCCAGCAACCTCTaGGCCAGAGGCAGTCCGCCCTCGTCCACGCAAAAGAAGCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLGQSHTEMTSSNL*ARGSPPSSTQKKPD Trigger: ATCGGGCTTCTTTTGCGTGGACGAGGGCGGACTGCCTCTGGCTCAGAGGTTGCTGGATGTCATCTCTGTATGTGACTGTCCTAGAGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS GCA 90 bp | TCCGTCTTGTCAAACACCGCAAGCCGTGAGTCCCCTGGACTGAGCTaGACTTGGTACAGTGGCTCCTGGTCACTCTGCAGTAGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLSNTASRESPGLS*TWYSGSWSLCSRMV Trigger: GACCATCCTACTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCCAGGGGACTCACGGCTTGCGGTGTTTGACAAGACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | AGCCCGTACCCCAGCTTACAATGCCACATAGCCGCCACCTTGATGTCCCAGAGAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPYPSLQCHIAATLMSQRMRAAT*GLEQHA Trigger: AGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCAT...TCTCTGGGACATCAAGGTGGCGGCTATGTGGCATTGTAAGCTGGGGTACGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165124.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGGAAACCATTCCATGTGAGGCCCAGTGTGGAGCCTACCACGTGGGGCTGGAAGCCTTTATGGCCTaGAAGATCCACTCCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQETIPCEAQCGAYHVGLEAFMA*KIHSRK Trigger: CTTCCGGGAGTGGATCTTCAAGGCCATAAAGGCTTC...CAGCCCCACGTGGTAGGCTCCACACTGGGCCTCACATGGAATGGTTTCCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171225.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGTGGGAGGGTGAGGCCAATGGCCCTGGGATTGAGTGGGCCGGCCACTGTACCAAGGCAATGTCATaGCTGTTTTCGTCGATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: MGWEGEANGPGIEWAGHCTKAMS*LFSSIV Trigger: TACTATCGACGAAAACAGCAATGACATTGCCTTGGT...ACAGTGGCCGGCCCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | AGAAGTCCTTGGATCCAGCATCCTTGGACCCGTGGACTGGATCTGAGCAGGAAAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPWIQHPWTRGLDLSRKMRAAT*GLEQHA Trigger: AGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCAT...TTTCCTGCTCAGATCCAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | CGTGGGGCTGGAGCCACCAGACCAACTCTGACTCTGGATGCTAGTGCAGCACGGACCAAGGCAATGTCATaGCTGTTTTCGTCGATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGAGATRPTLTLDASAARTKAMS*LFSSIV Trigger: TACTATCGACGAAAACAGCAATGACATTGCCTTGGT...CCGTGCTGCACTAGCATCCAGAGTCAGAGTTGGTCTGGTGGCTCCAGCCCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTGGGATTGAGTGGGCCGGCCACTGTGGAAGAGAAGTCCTTGGATCCAGCACCAAGGCAATGTCATaGCTGTTTTCGTCGATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPGIEWAGHCGREVLGSSTKAMS*LFSSIV Trigger: TACTATCGACGAAAACAGCAATGACATTGCCTTGGT...GCTGGATCCAAGGACTTCTCTTCCACAGTGGCCGGCCCACTCAATCCCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 |
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| CDS-3UTR CAA 90 bp | AAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCGTCACAGTACAGACCTaGCCATCCACCAGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPPLLFKEHLHKGLPRAPVTVQT*PSTRAC Trigger: ACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGAC...GGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
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| CDS-3UTR CAA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCGTCACAGTACAGACCTaGCCATCCACCAGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QNHLYYLKSICTRGSLERVTVQT*PSTRAC Trigger: ACAGGCCCTGGTGGATGGCAAGGTCTGTACTGTGAC...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000168884.8 ENSMUST00000171259.2 |
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| CDS-3UTR CAA 90 bp | AACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCCCCGTGGACTTTATGGCCTaGAAGATCCACTCCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NHLYYLKSICTRGSLERPVDFMA*KIHSRK Trigger: CTTCCGGGAGTGGATCTTCAAGGCCATAAAGTCCAC...GGGGCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
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| CDS-3UTR CAA 90 bp | CAAAACCACCTTTATTATTTAAAGAGCATCTGCACAAGGGGCTCCCTAGAGCGCGTGGAAGAGAAGTCCTaGGATCCAGCATCCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QNHLYYLKSICTRGSLERVEEKS*DPASLD Trigger: GTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCAC...GCGCTCTAGGGAGCCCCTTGTGCAGATGCTCTTTAAATAATAAAGGTGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
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| CDS CAA 90 bp | AGAGGCAGTCCGCCCTCGTCCACGCAAAAGAAGCCCGATGTGCCGTaGGCGCCCGCAGTGCGCACATCCAGCTCCGAGTGCGCCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGSPPSSTQKKPDVP*APAVRTSSSECARA Trigger: GGCTCTGGCGCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGACGAGGGCGGACTGCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS GCA 72 bp | GCAGTCCGCCCTCGTCCACGCAAAAGAAGCCCGATGTaGCGTTGGCGCCCGCAGTGCGCACATCCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVRPRPRKRSPM*RWRPQCAHPAP Trigger: CGGAGCTGGATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGACGAGGGCGGACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CCA 72 bp | CGCCCTCGTCCACGCAAAAGAAGCCCGATGTGCCGTTaGCGCCCGCAGTGCGCACATCCAGCTCCGAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPRPRKRSPMCR*RPQCAHPAPSA Trigger: CGCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGACGAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CAA 72 bp | CCGCCCTCGTCCACGCAAAAGAAGCCCGATGTGCCGTaGGCGCCCGCAGTGCGCACATCCAGCTCCGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPSSTQKKPDVP*APAVRTSSSEC Trigger: GCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGACGAGGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS GCA 72 bp | CCGTTGGCGCCCGCAGTGCGCACATCCAGCTCCGAGTaGGCCAGAGCCCTGAGAAAGCCCATCTCCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PLAPAVRTSSSE*ARALRKPISSQ Trigger: CTGTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACTCGGAGCTGGATGTGCGCACTGCGGGCGCCAACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS TCA 72 bp | CAGTGCGCACATCCAGCTCCGAGTGCGCCAGAGCCCTaGGAAAGCCCATCTCCTCACAGCCGAGCCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QCAHPAPSAPEP*ESPSPHSRALP Trigger: TGGCAGGGCTCGGCTGTGAGGAGATGGGCTTTCTCAGGGCTCTGGCGCACTCGGAGCTGGATGTGCGCACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CAA 72 bp | CCCATCTCCTCACAGCCGAGCCCTGCCACCCTGGCATaGGAGCGTGAGGAGCACAGTAGCCTCCACGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PISSQPSPATLA*EREEHSSLHVP Trigger: GGGAACGTGGAGGCTACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAGGAGATGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS CCA 72 bp | CCATCTCCTCACAGCCGAGCCCTGCCACCCTGGCATTaGAGCGTGAGGAGCACAGTAGCCTCCACGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPHSRALPPWH*SVRSTVASTFP Trigger: AGGGAACGTGGAGGCTACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAGGAGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CAA 90 bp | CTGAGAAAGCCCATCTCCTCACAGCCGAGCCCTGCCACCCTGGCATaGGAGCGTGAGGAGCACAGTAGCCTCCACGTTCCCTCCGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRKPISSQPSPATLA*EREEHSSLHVPSVL Trigger: CAAGACGGAGGGAACGTGGAGGCTACTGTGCTCCTCACGCTCCAATGCCAGGGTGGCAGGGCTCGGCTGTGAGGAGATGGGCTTTCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS CAA 90 bp | ATGCCTGTCAGGAACAGCAGGGTACCCACAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCTGCAGTCCGGCCACCCTCCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: MPVRNSRVPTMRAAT*GLEQHAAVRPPSFA Trigger: GGCGAAGGAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCTGACAGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS CAA 72 bp | AGGAACAGCAGGGTACCCACAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCTGCAGTCCGGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RNSRVPTMRAAT*GLEQHAAVRPP Trigger: GGGTGGCCGGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
||
| CDS GCA 72 bp | CTGAGCTGCACTTGGTACAGTGGCTCCTGGTCACTCTaGAGTAGGATGGTCACAATGGCCCAGGACGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSCTWYSGSWSL*SRMVTMAQDAA Trigger: GGCCGCGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CCA 72 bp | CTTGGTACAGTGGCTCCTGGTCACTCTGCAGTAGGATaGTCACAATGGCCCAGGACGCGGCCCCAATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGTVAPGHSAVG*SQWPRTRPQCL Trigger: CAGGCATTGGGGCCGCGTCCTGGGCCATTGTGACCATCCTACTGCAGAGTGACCAGGAGCCACTGTACCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CAA 72 bp | CGTGAGGAGCACAGTAGCCTCCACGTTCCCTCCGTCTaGTCAAACACCGCAAGCCGTGAGTCCCCTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: REEHSSLHVPSV*SNTASRESPGL Trigger: CAGTCCAGGGGACTCACGGCTTGCGGTGTTTGACAAGACGGAGGGAACGTGGAGGCTACTGTGCTCCTCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CAA 90 bp | ATGCCTGTCAGGAACAGCAGGGTACCCACAATGAGAGCTGCCACCTaGGGTCTGGAGCAGCATGCTGCAGTCCGGCCACCCTTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: MPVRNSRVPTMRAAT*GLEQHAAVRPPFPG Trigger: ACCTGGAAAGGGTGGCCGGACTGCAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCTGACAGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 |
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| CDS CAA 90 bp | GCATTGGAGCGTGAGGAGCACAGTAGCCTCCACGTTCCCTCCGTCTaGTCAAACACCGCAAGCCGTGAGTCCCCTGGACTGAGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: ALEREEHSSLHVPSV*SNTASRESPGLSCT Trigger: AGTGCAGCTCAGTCCAGGGGACTCACGGCTTGCGGTGTTTGACAAGACGGAGGGAACGTGGAGGCTACTGTGCTCCTCACGCTCCAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS TCA 72 bp | TGCTGCAGTCCGGCCACCCTTTCCAGGTTGGGGTCTTaGACAAGTGGAACCTCCTCTGTGAGCCCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: CCSPATLSRLGS*TSGTSSVSPRF Trigger: GAACCTGGGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGGCCGGACTGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000164929.3 |
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| CDS TCA 72 bp | CCCCAATGCCTGTCAGGAACAGCAGGGTACCCACAATaGGAGCTGCCACCTTGGGTCTGGAGCAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: PQCLSGTAGYPQ*ELPPWVWSSML Trigger: CAGCATGCTGCTCCAGACCCAAGGTGGCAGCTCTCATTGTGGGTACCCTGCTGTTCCTGACAGGCATTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS TCA 72 bp | CCACGTTCCCTCCGTCTTGTCAAACACCGCAAGCCGTaGGTCCCCTGGACTGAGCTGCACTTGGTACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PRSLRLVKHRKP*VPWTELHLVQW Trigger: CCACTGTACCAAGTGCAGCTCAGTCCAGGGGACTCACGGCTTGCGGTGTTTGACAAGACGGAGGGAACGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS GCA 72 bp | TCAAACACCGCAAGCCGTGAGTCCCCTGGACTGAGCTaGACTTGGTACAGTGGCTCCTGGTCACTCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SNTASRESPGLS*TWYSGSWSLCS Trigger: ACTGCAGAGTGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCCAGGGGACTCACGGCTTGCGGTGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS CCA 72 bp | TCCGGCCACCCTTTCCAGGTTGGGGTCTTGAACAAGTaGAACCTCCTCTGTGAGCCCCAGGTTCCTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: SGHPFQVGVLNK*NLLCEPQVPHL Trigger: CAGATGAGGAACCTGGGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039435.15 ENSMUST00000164929.3 |
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| CDS CCA 72 bp | TCCGGCCACCCTTTCCAGGTTGGGGTCTTGAACAAGTaGAACCTCCTCTGTGAGCCCCAGGTTCCTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: SGHPFQVGVLNK*NLLCEPQVPHP Trigger: AGGATGAGGAACCTGGGGCTCACAGAGGAGGTTCCACTTGTTCAAGACCCCAACCTGGAAAGGGTGGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108102.9 |
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| CDS CAA 90 bp | GTGGACTTTATGGCCTTGAAGATCCACTCCCGGAAGTCAGTGACTTaGGTGTACACTCCTGGCTTCCGGGCCAAAGCACAGCCCGTACCC | + |
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Preference number: 6 (lower is better) Translates to: VDFMALKIHSRKSVT*VYTPGFRAKAQPVP Trigger: GGGTACGGGCTGTGCTTTGGCCCGGAAGCCAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAGGCCATAAAGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
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| CDS TCA 72 bp | TCTTGTCAAACACCGCAAGCCGTGAGTCCCCTGGACTaGGCTGCACTTGGTACAGTGGCTCCTGGTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: SCQTPQAVSPLD*AALGTVAPGHS Trigger: AGAGTGACCAGGAGCCACTGTACCAAGTGCAGCTCAGTCCAGGGGACTCACGGCTTGCGGTGTTTGACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039435.15 ENSMUST00000108102.9 ENSMUST00000165124.8 ENSMUST00000168884.8 |
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| CDS TCA 72 bp | CCTCATCTGCGGCCATGTCCTGAACCCCGGGCACACTaGGATCCAGGTTCCAAAGTAGTTGCCCAAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: PHLRPCPEPRAH*DPGSKVVAQET Trigger: GGTTTCTTGGGCAACTACTTTGGAACCTGGATCTCAGTGTGCCCGGGGTTCAGGACATGGCCGCAGATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164929.3 |
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| CDS CAA 72 bp | CAGACGCTTGTCCCATCCCCAGAAGCCTTTATGGCCTaGAAGATCCACTCCCGGAAGTCAGTGACTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QTLVPSPEAFMA*KIHSRKSVTLV Trigger: CACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAGGCCATAAAGGCTTCTGGGGATGGGACAAGCGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171225.2 |
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| CDS CAA 72 bp | GGATCCAGCATCCTTGGACCCGTGGACTTTATGGCCTaGAAGATCCACTCCCGGAAGTCAGTGACTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GSSILGPVDFMA*KIHSRKSVTLV Trigger: CACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAGGCCATAAAGTCCACGGGTCCAAGGATGCTGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
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| CDS CCA 72 bp | CCACTGTGGAAGAGAAGTCCTTGGATCCAGCATCCTTaGACCCGTGGACTTTATGGCCTTGAAGATCCACTC | + |
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Preference number: 6 (lower is better) Translates to: PLWKRSPWIQHP*TRGLYGLEDPL Trigger: GAGTGGATCTTCAAGGCCATAAAGTCCACGGGTCCAAGGATGCTGGATCCAAGGACTTCTCTTCCACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171259.2 |
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| CDS GCA 72 bp | ACCCCGGGCACACTGAGATCCAGGTTCCAAAGTAGTTaGCCAAGAAACCAAACTGCCTTTTGTTGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TPGTLRSRFQSS*PRNQTAFCCAS Trigger: ACTGGCACAACAAAAGGCAGTTTGGTTTCTTGGGCAACTACTTTGGAACCTGGATCTCAGTGTGCCCGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164929.3 |
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