Pregenerated sensors for HOOK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037234Ensembl transcript IDs: ENSMUST00000037182.14, ENSMUST00000147613.3, ENSMUST00000211683.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAACCCTTGGGAGTTGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTaGGCCCAGGCAAGTGCTACGCTTCCTGCTGAGCCATTGTGCTGG | + |
Preference number: 1 (lower is better) Translates to: QPLGVAVPCHLGPRK*AQASATLPAEPLCW Trigger: CCAGCACAATGGCTCAGCAGGAAGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCAACTCCCAAGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 90 bp | CTGGCATCTGTTGAGTGTGGAGACCAGAGGACAACCCTTGGGAGTTaGTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAG | + |
Preference number: 1 (lower is better) Translates to: LASVECGDQRTTLGS*CPLSPRPQEVSPGK Trigger: CTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCAACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 90 bp | GCTGCTCTCTGTCCCACTGTAGTGCTCTCCACTATTTCCTGTGCCTaGTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAA | + |
Preference number: 1 (lower is better) Translates to: AALCPTVVLSTISCA*CFGLPRRMPHSLLE Trigger: TTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGGCACAGGAAATAGTGGAGAGCACTACAGTGGGACAGAGAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 90 bp | CAGCTCAGAGCTCTCGCAGTGAGTCTGACCAGACATCTGCGGGTATaGGCAGTGCCCTCTGCATGCCTGGGGATTGTCTTTTACTCACTC | + |
Preference number: 1 (lower is better) Translates to: QLRALAVSLTRHLRV*AVPSACLGIVFYSL Trigger: GAGTGAGTAAAAGACAATCCCCAGGCATGCAGAGGGCACTGCCCATACCCGCAGATGTCTGGTCAGACTCACTGCGAGAGCTCTGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 90 bp | TCTCCCTGTGTAGACCAGGCTAGCCTTGAACTCAGAGAGATCTCCTaGCTCTGTCTCCTAAGTGCTGAAACAAGGTCTCATTGCATAGCC | + |
Preference number: 1 (lower is better) Translates to: SPCVDQASLELREIS*LCLLSAETRSHCIA Trigger: GGCTATGCAATGAGACCTTGTTTCAGCACTTAGGAGACAGAGGCAGGAGATCTCTCTGAGTTCAAGGCTAGCCTGGTCTACACAGGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 90 bp | CTTGTGATCCTGGTGCCTGAGCCTGCTGCTGGGATTATGGGTGTGTaGCACCATCCTGGCTTTCTAAGTTTTAGTTCTGGAAAGGAGAAC | + |
Preference number: 1 (lower is better) Translates to: LVILVPEPAAGIMGV*HHPGFLSFSSGKEN Trigger: GTTCTCCTTTCCAGAACTAAAACTTAGAAAGCCAGGATGGTGGCACACACCCATAATCCCAGCAGCAGGCTCAGGCACCAGGATCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 90 bp | CTGCCTGCATGTATGTCTGTATGGCACATGTGTACCTGGTGCCCATaGAGGTCAGAAGATGGCATTGGAAGATTCCCTGAAACTGGAGTT | + |
Preference number: 1 (lower is better) Translates to: LPACMSVWHMCTWCP*RSEDGIGRFPETGV Trigger: AACTCCAGTTTCAGGGAATCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATACAGACATACATGCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 90 bp | GTGTTTTGCCTGCCTGCATGTATGTCTGTATGGCACATGTGTACCTaGTGCCCATGGAGGTCAGAAGATGGCATTGGAAGATTCCCTGAA | + |
Preference number: 1 (lower is better) Translates to: VFCLPACMSVWHMCT*CPWRSEDGIGRFPE Trigger: TTCAGGGAATCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATACAGACATACATGCAGGCAGGCAAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 90 bp | TTTTGCCTGCCTGCATGTATGTCTGTATGGCACATGTGTACCTGGTaGCCATGGAGGTCAGAAGATGGCATTGGAAGATTCCCTGAAACT | + |
Preference number: 1 (lower is better) Translates to: FCLPACMSVWHMCTW*PWRSEDGIGRFPET Trigger: AGTTTCAGGGAATCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATACAGACATACATGCAGGCAGGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 90 bp | TTTTTAAAAATTCCTAGTGGCAAGACCTTTCTACCTTGCTGTGGCTaGCTGGACATGGCCTGGGTAGGATCTTCTTGTGCTGGTTGCTTG | + |
Preference number: 1 (lower is better) Translates to: FLKIPSGKTFLPCCG*LDMAWVGSSCAGCL Trigger: CAAGCAACCAGCACAAGAAGATCCTACCCAGGCCATGTCCAGCCAGCCACAGCAAGGTAGAAAGGTCTTGCCACTAGGAATTTTTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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3UTR TCA 90 bp | CATATAAGAACTTCAAACCTTAGAATACGTTTAATTTCTCCCCTCTaGGTGATCCTGCCAGGTGCCACAGGTCTGACTAGCACCTCTGCC | + |
Preference number: 1 (lower is better) Translates to: HIRTSNLRIRLISPL*VILPGATGLTSTSA Trigger: GGCAGAGGTGCTAGTCAGACCTGTGGCACCTGGCAGGATCACTCAGAGGGGAGAAATTAAACGTATTCTAAGGTTTGAAGTTCTTATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 90 bp | GAAGTATGCTTTTTAAAAATTCCTAGTGGCAAGACCTTTCTACCTTaGTGTGGCTGGCTGGACATGGCCTGGGTAGGATCTTCTTGTGCT | + |
Preference number: 1 (lower is better) Translates to: EVCFLKIPSGKTFLP*CGWLDMAWVGSSCA Trigger: AGCACAAGAAGATCCTACCCAGGCCATGTCCAGCCAGCCACAGCAAGGTAGAAAGGTCTTGCCACTAGGAATTTTTAAAAAGCATACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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3UTR TCA 90 bp | TTTCTAGATTACGATGATGAGGAATATATCCTCAGAACTCTCGACTaGATTGTCAGCCAGAGGGGGAATCTCTTACAGAACAAAGGAGGG | + |
Preference number: 1 (lower is better) Translates to: FLDYDDEEYILRTLD*IVSQRGNLLQNKGG Trigger: CCCTCCTTTGTTCTGTAAGAGATTCCCCCTCTGGCTGACAATTCAGTCGAGAGTTCTGAGGATATATTCCTCATCATCGTAATCTAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 90 bp | GAGAACTATTTAAAACCTTTCAAGCATACTTATTTGTGTGTGCACTaGCATCTGTTGAGTGTGGAGACCAGAGGACAACCCTTGGGAGTT | + |
Preference number: 1 (lower is better) Translates to: ENYLKPFKHTYLCVH*HLLSVETRGQPLGV Trigger: AACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCAGTGCACACACAAATAAGTATGCTTGAAAGGTTTTAAATAGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR TCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTTTAATTTCTCCCCTCTaGGTGATCCTGCCAGGTGCC | + |
Preference number: 2 (lower is better) Translates to: PAALVCPGGCLTACLNICLISPL*VILPGA Trigger: GGCACCTGGCAGGATCACTCAGAGGGGAGAAATTAA...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTAAGACCATGTGTTCATaGCAGCCTGGGTTACATAAA | + |
Preference number: 2 (lower is better) Translates to: CCPLSPRPQEVSPGKCYAKTMCS*QPGLHK Trigger: TTTATGTAACCCAGGCTGCCATGAACACATGGTCTT...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCAATGGGCAGTGCCCTCTaGATGCCTGGGGATTGTCTT | + |
Preference number: 2 (lower is better) Translates to: NPETEVPTGNSTYSRNGAMGSAL*MPGDCL Trigger: AAGACAATCCCCAGGCATGCAGAGGGCACTGCCCAT...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | CCAGACATCTGCGGGTATGGGCAGTGCCCTCTGCATGCCTGGGGATaGTCTTTTACTCACTCGCTTGTTCTTCTCACGGCATTTAATTCT | + |
Preference number: 2 (lower is better) Translates to: PDICGYGQCPLHAWG*SFTHSLVLLTAFNS Trigger: AGAATTAAATGCCGTGAGAAGAACAAGCGAGTGAGTAAAAGACAATCCCCAGGCATGCAGAGGGCACTGCCCATACCCGCAGATGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCACTGCCTTGTCCCAACTaGACCCCCACATTTGCATGT | + |
Preference number: 2 (lower is better) Translates to: NPETEVPTGNSTYSRNGALPCPN*TPTFAC Trigger: ACATGCAAATGTGGGGGTCCAGTTGGGACAAGGCAG...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCAGACAGATGGCTTAGCTaGCTGCTCTTGCAAGAGGAC | + |
Preference number: 2 (lower is better) Translates to: NPETEVPTGNSTYSRNGADRWLS*LLLQED Trigger: GTCCTCTTGCAAGAGCAGCCAGCTAAGCCATCTGTC...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | AGGGCATCTGACTTCACCTGCCTTGTCCCAACTGGACCCCCACATTaGCATGTTCTTGTACAGTGTGGATCTCTAACGACAGTGAAAGCA | + |
Preference number: 2 (lower is better) Translates to: RASDFTCLVPTGPPH*HVLVQCGSLTTVKA Trigger: TGCTTTCACTGTCGTTAGAGATCCACACTGTACAAGAACATGCAAATGTGGGGGTCCAGTTGGGACAAGGCAGGTGAAGTCAGATGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | GTGCCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTaGAACATTTGTTGGAAGGGTTGTTTTTGTTTTTGTGAGGTTTTT | + |
Preference number: 2 (lower is better) Translates to: VPAALVCPGGCLTAC*NICWKGCFCFCEVF Trigger: AAAAACCTCACAAAAACAAAAACAACCCTTCCAACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR TCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTTTTCTCCCCTCTGAGTaGTCCTGCCAGGTGCCACAG | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNAFLPSE*SCQVPQ Trigger: CTGTGGCACCTGGCAGGATCACTCAGAGGGGAGAAA...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTCCAGAGGACAACCCTTaGGAGTTGCTGTCCCCTGTC | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNAPEDNP*ELLSPV Trigger: GACAGGGGACAGCAACTCCCAAGGGTTGTCCTCTGG...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | TTAAAACCTTTCAAGCATACTTATTTGTGTGTGCACTGGCATCTGTaGAGTGTGGAGACCAGAGGACAACCCTTGGGAGTTGCTGTCCCC | + |
Preference number: 2 (lower is better) Translates to: LKPFKHTYLCVHWHL*SVETRGQPLGVAVP Trigger: GGGGACAGCAACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCAGTGCACACACAAATAAGTATGCTTGAAAGGTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | TATGGCACATGTGTACCTGGTGCCCATGGAGGTCAGAAGATGGCATaGGAAGATTCCCTGAAACTGGAGTTAGAGATGGCTGGTTATAAG | + |
Preference number: 2 (lower is better) Translates to: YGTCVPGAHGGQKMA*EDSLKLELEMAGYK Trigger: CTTATAACCAGCCATCTCTAACTCCAGTTTCAGGGAATCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR TCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGATGCTACGCTTCCTGCTaGGCCATTGTGCTGGCCCCA | + |
Preference number: 2 (lower is better) Translates to: PFTEGNPPNIKDRANNSRCYASC*AIVLAP Trigger: TGGGGCCAGCACAATGGCTCAGCAGGAAGCGTAGCA...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | AAGGTAAATAACATTTTCCACAGAGGGCATCTGACTTCACCTGCCTaGTCCCAACTGGACCCCCACATTTGCATGTTCTTGTACAGTGTG | + |
Preference number: 2 (lower is better) Translates to: KVNNIFHRGHLTSPA*SQLDPHICMFLYSV Trigger: CACACTGTACAAGAACATGCAAATGTGGGGGTCCAGTTGGGACAAGGCAGGTGAAGTCAGATGCCCTCTGTGGAAAATGTTATTTACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTGCACTGGCATCTGTTaGGTGTGGAGACCAGAGGAC | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYCTGIC*VWRPED Trigger: GTCCTCTGGTCTCCACACTCAACAGATGCCAGTGCA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTACTGACAAGCTAGCTTaGCTTTGTGCAGCTGAGCCC | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNATDKLA*LCAAEP Trigger: GGGCTCAGCTGCACAAAGGCAAGCTAGCTTGTCAGT...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR TCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTGCCTCACAGCCTGCTTaGACATTTGTTGGAAGGGTT | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNAASQPA*TFVGRV Trigger: AACCCTTCCAACAAATGTTCAAGCAGGCTGTGAGGC...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGAACAACCCTTGGGAGTTaGTGTCCCCTGTCACCTAGG | + |
Preference number: 2 (lower is better) Translates to: PFTEGNPPNIKDRANNSRTTLGS*CPLSPR Trigger: CCTAGGTGACAGGGGACAGCAACTCCCAAGGGTTGT...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCAAGAAACTTAGGCAAGTaGCACATTCCCAAATTAGAC | + |
Preference number: 2 (lower is better) Translates to: NPETEVPTGNSTYSRNGARNLGK*HIPKLD Trigger: GTCTAATTTGGGAATGTGGCACTTGCCTAAGTTTCT...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTATCCTGAGACTGAGGTaGCAACAGGAAACAGCACGT | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNAILRLR*QQETAR Trigger: ACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGAT...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACCTCTGGCAGTCATCATaGGTGAAACAAGCGCCAGTG | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYLWQSS*VKQAPV Trigger: CACTGGCGCTTGTTTCACGCATGATGACTGCCAGAG...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTGGCACATGTGTACCTaGTGCCCATGGAGGTCAGAA | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYWHMCT*CPWRSE Trigger: TTCTGACCTCCATGGGCACCAGGTACACATGTGCCA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACTGGCTGGACATGGCCTaGGTAGGATCTTCTTGTGCT | + |
Preference number: 2 (lower is better) Translates to: VKDKVTKDRRERNPHEKHWLDMA*VGSSCA Trigger: AGCACAAGAAGATCCTACCCAGGCCATGTCCAGCCA...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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3UTR-3UTR GCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACAAGACCTTTCTACCTTaGTGTGGCTGGCTGGACATG | + |
Preference number: 2 (lower is better) Translates to: VKDKVTKDRRERNPHEKHKTFLP*CGWLDM Trigger: CATGTCCAGCCAGCCACAGCAAGGTAGAAAGGTCTT...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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3UTR-3UTR CCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCATGCATGGCTAGAATCTaGTTCTTAGCTACTAAGATA | + |
Preference number: 2 (lower is better) Translates to: NPETEVPTGNSTYSRNGACMARI*FLATKI Trigger: TATCTTAGTAGCTAAGAACCAGATTCTAGCCATGCA...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTGACACAAGTTCTACATaGGGCAGCTATGTGACTCCA | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNADTSST*GSYVTP Trigger: TGGAGTCACATAGCTGCCCCATGTAGAACTTGTGTC...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACCACAGTTTTCTGCACTaGAGGAATGGCCTACATCCA | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYHSFLH*RNGLHP Trigger: TGGATGTAGGCCATTCCTTCAGTGCAGAAAACTGTG...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGATCTCCTGTGCCTGCTaGTCTCTGTCCCACTGTAGT | + |
Preference number: 2 (lower is better) Translates to: LIPLATSSELTCIFFPFLISCAC*SLSHCS Trigger: ACTACAGTGGGACAGAGAGCAGCAGGCACAGGAGAT...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | CCTCTTGGGAGGCAGAGGCAGGAGAATAGTCTTGAGTCAAAGAAGTaGAGGAAGGTCTGGATAATATCCCTAGATTGTCTTAAAACAATA | + |
Preference number: 2 (lower is better) Translates to: PLGRQRQENSLESKK*RKVWIISLDCLKTI Trigger: TATTGTTTTAAGACAATCTAGGGATATTATCCAGACCTTCCTCAACTTCTTTGACTCAAGACTATTCTCCTGCCTCTGCCTCCCAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTCACCAATTTCACTTCTaGCAGCAAACAATACAGCAG | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNAHQFHF*QQTIQQ Trigger: CTGCTGTATTGTTTGCTGGCAGAAGTGAAATTGGTG...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR GCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGGGGATAAACAACCTATaGAGGAGAGGGTGGGAGATA | + |
Preference number: 2 (lower is better) Translates to: LIPLATSSELTCIFFPFLGINNL*RRGWEI Trigger: TATCTCCCACCCTCTCCTGCATAGGTTGTTTATCCC...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTAAAATCCCAAATCCTTaGAACTGGACAGATGGCTTA | + |
Preference number: 2 (lower is better) Translates to: EQGLYFLKAECGRLYFNAKIPNP*NWTDGL Trigger: TAAGCCATCTGTCCAGTTCCAAGGATTTGGGATTTT...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACCTCAGTACTACTGACTaGTACTACTTCCTCAGTACT | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYLSTTD*YYFLST Trigger: AGTACTGAGGAAGTAGTACCAGTCAGTAGTACTGAG...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 90 bp | ATTTGCTCTTCTGTACTGAGTTACAGTAACGACCCCGTGACTTGTTaGGAAATTGACAATAATGTTCTGATTCTGCTGCCTGATCATCAA | + |
Preference number: 2 (lower is better) Translates to: ICSSVLSYSNDPVTC*EIDNNVLILLPDHQ Trigger: TTGATGATCAGGCAGCAGAATCAGAACATTATTGTCAATTTCCAAACAAGTCACGGGGTCGTTACTGTAACTCAGTACAGAAGAGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR TCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGATTCCTTCTGAAAGCTTaGGGCCTTTCCAAAACATCT | + |
Preference number: 2 (lower is better) Translates to: PFTEGNPPNIKDRANNSRFLLKA*GLSKTS Trigger: AGATGTTTTGGAAAGGCCTCAAGCTTTCAGAAGGAA...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACAGACGTCCCTTAGTTTaGTTTGAAAACGTTCAGCAT | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYRRPLV*FENVQH Trigger: ATGCTGAACGTTTTCAAATCAAACTAAGGGACGTCT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR GCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGGTACTCCTGCACTTTTaGTTCAGTTTTGAGACAGGC | + |
Preference number: 2 (lower is better) Translates to: LIPLATSSELTCIFFPFLVLLHF*FSFETG Trigger: GCCTGTCTCAAAACTGAAGCAAAAGTGCAGGAGTAC...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACACAAACCCCAAAAGCTaGCTTCACAGCATTGTTATA | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYTNPKS*LHSIVI Trigger: TATAACAATGCTGTGAAGCCAGCTTTTGGGGTTTGT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACAAGGGACAGCTACTATaGTACTGTTTGAATACTTCT | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYKGQLL*YCLNTS Trigger: AGAAGTATTCAAACAGTATCATAGTAGCTGTCCCTT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACACTACCAGTACAAGATaGAACCTTTGCAAGTTAAAG | + |
Preference number: 2 (lower is better) Translates to: IRLPRKQKNELLPFALLYTTSTR*NLCKLK Trigger: CTTTAACTTGCAAAGGTTTCATCTTGTACTGGTAGT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGACAAAGCCCACACAAATaGGGAAGAAGACATTTTCAT | + |
Preference number: 2 (lower is better) Translates to: PFTEGNPPNIKDRANNSRQSPHK*GRRHFH Trigger: ATGAAAATGTCTTCTTCCCCATTTGTGTGGGCTTTG...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR TCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGATCTCAGATATTCTGTaGGCTAAAGGTAGAGTGAGA | + |
Preference number: 2 (lower is better) Translates to: LIPLATSSELTCIFFPFLISDIL*AKGRVR Trigger: TCTCACTCTACCTTTAGCTCACAGAATATCTGAGAT...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR GCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGAATGAGTGTTTTGCCTaGCTGCATGTATGTCTGTAT | + |
Preference number: 2 (lower is better) Translates to: LIPLATSSELTCIFFPFLNECFA*LHVCLY Trigger: ATACAGACATACATGCAGGCAGGCAAAACACTCATT...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | GTTGAGTGTGGAGACCAGAGGACAACCCTTGGGAGTTaGTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGC | + |
Preference number: 3 (lower is better) Translates to: VECGDQRTTLGS*CPLSPRPQEVS Trigger: GCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCAACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | TGTCCCACTGTAGTGCTCTCCACTATTTCCTGTGCCTaGTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGC | + |
Preference number: 3 (lower is better) Translates to: CPTVVLSTISCA*CFGLPRRMPHS Trigger: GCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGGCACAGGAAATAGTGGAGAGCACTACAGTGGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | GCTCTCGCAGTGAGTCTGACCAGACATCTGCGGGTATaGGCAGTGCCCTCTGCATGCCTGGGGATTGTCTTT | + |
Preference number: 3 (lower is better) Translates to: ALAVSLTRHLRV*AVPSACLGIVF Trigger: AAAGACAATCCCCAGGCATGCAGAGGGCACTGCCCATACCCGCAGATGTCTGGTCAGACTCACTGCGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | GGGGAGGGCAGGGTGTGCTTGCCAGCCGACAGACTTTaGTTGATTGACTCTGGACTGGAGCCAGGTAGTCTT | + |
Preference number: 3 (lower is better) Translates to: GEGRVCLPADRL*LIDSGLEPGSL Trigger: AAGACTACCTGGCTCCAGTCCAGAGTCAATCAATCAAAGTCTGTCGGCTGGCAAGCACACCCTGCCCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | TCTCTGTCCCACTGTAGTGCTCTCCACTATTTCCTGTaGCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCA | + |
Preference number: 3 (lower is better) Translates to: SLSHCSALHYFL*LLLWSAQADAS Trigger: TGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGGCACAGGAAATAGTGGAGAGCACTACAGTGGGACAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | AGGGCAGGGTGTGCTTGCCAGCCGACAGACTTTGATTaGTTGACTCTGGACTGGAGCCAGGTAGTCTTGTGC | + |
Preference number: 3 (lower is better) Translates to: RAGCACQPTDFD*LTLDWSQVVLC Trigger: GCACAAGACTACCTGGCTCCAGTCCAGAGTCAATCAATCAAAGTCTGTCGGCTGGCAAGCACACCCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | TGCTCTCCACTATTTCCTGTGCCTGCTGCTTTGGTCTaGCCAGGCGGATGCCTCACAGCCTGCTTGAACATT | + |
Preference number: 3 (lower is better) Translates to: CSPLFPVPAALV*PGGCLTACLNI Trigger: AATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGGCACAGGAAATAGTGGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | TCTGACCAGACATCTGCGGGTATGGGCAGTGCCCTCTaGATGCCTGGGGATTGTCTTTTACTCACTCGCTTG | + |
Preference number: 3 (lower is better) Translates to: SDQTSAGMGSAL*MPGDCLLLTRL Trigger: CAAGCGAGTGAGTAAAAGACAATCCCCAGGCATGCAGAGGGCACTGCCCATACCCGCAGATGTCTGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TGTCCTCATCCCTTGCTAATGCCAGGACAAGATCCATaGGGCAAGCACAGGAGGCTTACCACACACCACCAG | + |
Preference number: 3 (lower is better) Translates to: CPHPLLMPGQDP*GKHRRLTTHHQ Trigger: CTGGTGGTGTGTGGTAAGCCTCCTGTGCTTGCCCCATGGATCTTGTCCTGGCATTAGCAAGGGATGAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | CAGATGCTGGTGACAGGTCCTCCCTACCTGACACAGTaGCAGTGTCCTCATCCCTTGCTAATGCCAGGACAA | + |
Preference number: 3 (lower is better) Translates to: QMLVTGPPYLTQ*QCPHPLLMPGQ Trigger: TTGTCCTGGCATTAGCAAGGGATGAGGACACTGTCACTGTGTCAGGTAGGGAGGACCTGTCACCAGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | ACCAGACATCTGCGGGTATGGGCAGTGCCCTCTGCATaGCTGGGGATTGTCTTTTACTCACTCGCTTGTTCT | + |
Preference number: 3 (lower is better) Translates to: TRHLRVWAVPSA*LGIVFYSLACS Trigger: AGAACAAGCGAGTGAGTAAAAGACAATCCCCAGGCATGCAGAGGGCACTGCCCATACCCGCAGATGTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | GACATCTGCGGGTATGGGCAGTGCCCTCTGCATGCCTaGGGATTGTCTTTTACTCACTCGCTTGTTCTTCTC | + |
Preference number: 3 (lower is better) Translates to: DICGYGQCPLHA*GLSFTHSLVLL Trigger: GAGAAGAACAAGCGAGTGAGTAAAAGACAATCCCCAGGCATGCAGAGGGCACTGCCCATACCCGCAGATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | AGCACCTGCAACTTCCCTGATCTCCACGGGAGAAACTaGAGTCCCCTAAATCCTGACCTAAGCCACACAGTG | + |
Preference number: 3 (lower is better) Translates to: STCNFPDLHGRN*SPLNPDLSHTV Trigger: CACTGTGTGGCTTAGGTCAGGATTTAGGGGACTTCAGTTTCTCCCGTGGAGATCAGGGAAGTTGCAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | CTGGTGCCTGAGCCTGCTGCTGGGATTATGGGTGTGTaGCACCATCCTGGCTTTCTAAGTTTTAGTTCTGGA | + |
Preference number: 3 (lower is better) Translates to: LVPEPAAGIMGV*HHPGFLSFSSG Trigger: TCCAGAACTAAAACTTAGAAAGCCAGGATGGTGGCACACACCCATAATCCCAGCAGCAGGCTCAGGCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TCAACGCAGACGAGAAAGAGAAAGTGCGATCACGCCTaGGCAGGAAAGGCTTCACTAAGCTCAGTCTTAGCC | + |
Preference number: 3 (lower is better) Translates to: STQTRKRKCDHA*AGKASLSSVLA Trigger: GGCTAAGACTGAGCTTAGTGAAGCCTTTCCTGCCCAGGCGTGATCGCACTTTCTCTTTCTCGTCTGCGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | ATTCCTAGTGGCAAGACCTTTCTACCTTGCTGTGGCTaGCTGGACATGGCCTGGGTAGGATCTTCTTGTGCT | + |
Preference number: 3 (lower is better) Translates to: IPSGKTFLPCCG*LDMAWVGSSCA Trigger: AGCACAAGAAGATCCTACCCAGGCCATGTCCAGCCAGCCACAGCAAGGTAGAAAGGTCTTGCCACTAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
||
3UTR CCA 72 bp | CTGCCTGCATGTATGTCTGTATGGCACATGTGTACCTaGTGCCCATGGAGGTCAGAAGATGGCATTGGAAGA | + |
Preference number: 3 (lower is better) Translates to: LPACMSVWHMCT*CPWRSEDGIGR Trigger: TCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATACAGACATACATGCAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TGCACTGAAGGAATGGCCTACATCCATGCTGCCCACTaGCCACGCCTGAACACTGAACAACTGAGAAATGAT | + |
Preference number: 3 (lower is better) Translates to: CTEGMAYIHAAH*PRLNTEQLRND Trigger: ATCATTTCTCAGTTGTTCAGTGTTCAGGCGTGGCCAGTGGGCAGCATGGATGTAGGCCATTCCTTCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CAA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCACAGTGTCCTCATCCCTaGCTAATGCCAGGACAAGAT | + |
Preference number: 3 (lower is better) Translates to: NPETEVPTGNSTYSRNGAQCPHP*LMPGQD Trigger: ATCTTGTCCTGGCATTAGCAAGGGATGAGGACACTG...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CAA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTCTGACTTCACCTGCCTaGTCCCAACTGGACCCCCAC | + |
Preference number: 3 (lower is better) Translates to: EQGLYFLKAECGRLYFNALTSPA*SQLDPH Trigger: GTGGGGGTCCAGTTGGGACAAGGCAGGTGAAGTCAG...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | CCTGCATGTATGTCTGTATGGCACATGTGTACCTGGTaGCCATGGAGGTCAGAAGATGGCATTGGAAGATTC | + |
Preference number: 3 (lower is better) Translates to: PACMSVWHMCTW*PWRSEDGIGRF Trigger: GAATCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATACAGACATACATGCAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | CACACACTCACACATGCGCACACACACAGACACACATaGACACACACAGACACACACACATGTTCTCTCTCT | + |
Preference number: 3 (lower is better) Translates to: HTLTHAHTHRHT*THTDTHTCSLS Trigger: AGAGAGAGAACATGTGTGTGTGTCTGTGTGTGTGCATGTGTGTCTGTGTGTGTGCGCATGTGTGAGTGTGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | TCAAGCATACTTATTTGTGTGTGCACTGGCATCTGTTaGGTGTGGAGACCAGAGGACAACCCTTGGGAGTTG | + |
Preference number: 3 (lower is better) Translates to: SSILICVCTGIC*VWRPEDNPWEL Trigger: CAACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCAGTGCACACACAAATAAGTATGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TGTATGTCTGTATGGCACATGTGTACCTGGTGCCCATaGAGGTCAGAAGATGGCATTGGAAGATTCCCTGAA | + |
Preference number: 3 (lower is better) Translates to: CMSVWHMCTWCP*RSEDGIGRFPE Trigger: TTCAGGGAATCTTCCAATGCCATCTTCTGACCTCCATGGGCACCAGGTACACATGTGCCATACAGACATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | AACTGGACCCCCACATTTGCATGTTCTTGTACAGTGTaGATCTCTAACGACAGTGAAAGCAGGACTCGAGGT | + |
Preference number: 3 (lower is better) Translates to: NWTPTFACSCTV*ISNDSESRTRG Trigger: ACCTCGAGTCCTGCTTTCACTGTCGTTAGAGATCCACACTGTACAAGAACATGCAAATGTGGGGGTCCAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | AATCCCAAATCCTTGGAACTGGACAGATGGCTTAGCTaGCTGCTCTTGCAAGAGGACACAAGTTCTACATGG | + |
Preference number: 3 (lower is better) Translates to: NPKSLELDRWLS*LLLQEDTSSTW Trigger: CCATGTAGAACTTGTGTCCTCTTGCAAGAGCAGCCAGCTAAGCCATCTGTCCAGTTCCAAGGATTTGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | AGCCTTTCAAGTGCTAGAATCACAGGCTATTACACATaGCAGGAGGTACAGACTTGGCCTAGAACCCACTCT | + |
Preference number: 3 (lower is better) Translates to: SLSSARITGYYT*QEVQTWPRTHS Trigger: AGAGTGGGTTCTAGGCCAAGTCTGTACCTCCTGCCATGTGTAATAGCCTGTGATTCTAGCACTTGAAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CAA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCACTTCCTTCTGAAAGCTaGAGGCCTTTCCAAAACATC | + |
Preference number: 3 (lower is better) Translates to: NPETEVPTGNSTYSRNGALPSES*RPFQNI Trigger: GATGTTTTGGAAAGGCCTCAAGCTTTCAGAAGGAAG...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | ACTTCAAACCTTAGAATACGTTTAATTTCTCCCCTCTaGGTGATCCTGCCAGGTGCCACAGGTCTGACTAGC | + |
Preference number: 3 (lower is better) Translates to: TSNLRIRLISPL*VILPGATGLTS Trigger: GCTAGTCAGACCTGTGGCACCTGGCAGGATCACTCAGAGGGGAGAAATTAAACGTATTCTAAGGTTTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | TGCCTCTGTCTCCTAAGTGCTGAAACAAGGTCTCATTaGATAGCCCAGGCTAGCTTCCAACTTGCATTTTTC | + |
Preference number: 3 (lower is better) Translates to: CLCLLSAETRSH*IAQASFQLAFF Trigger: GAAAAATGCAAGTTGGAAGCTAGCCTGGGCTATGCAATGAGACCTTGTTTCAGCACTTAGGAGACAGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | ATGATTAGAGTATCAAGTGGAGATGGAATTTCACCATaGAGCCCTGAATGGCCTCGCCTTGTAGAAAGCCTC | + |
Preference number: 3 (lower is better) Translates to: MIRVSSGDGISP*SPEWPRLVESL Trigger: GAGGCTTTCTACAAGGCGAGGCCATTCAGGGCTGCATGGTGAAATTCCATCTCCACTTGATACTCTAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR GCA 72 bp | TTTTTAAAAATTCCTAGTGGCAAGACCTTTCTACCTTaGTGTGGCTGGCTGGACATGGCCTGGGTAGGATCT | + |
Preference number: 3 (lower is better) Translates to: FLKIPSGKTFLP*CGWLDMAWVGS Trigger: AGATCCTACCCAGGCCATGTCCAGCCAGCCACAGCAAGGTAGAAAGGTCTTGCCACTAGGAATTTTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
||
3UTR CCA 72 bp | GAGGATAAAAATCCCAAATCCTTGGAACTGGACAGATaGCTTAGCTGGCTGCTCTTGCAAGAGGACACAAGT | + |
Preference number: 3 (lower is better) Translates to: EDKNPKSLELDR*LSWLLLQEDTS Trigger: ACTTGTGTCCTCTTGCAAGAGCAGCCAGCTAAGCCATCTGTCCAGTTCCAAGGATTTGGGATTTTTATCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TCATTCATTCACCGCTCCTTCCTCAGTACTACTGACTaGTACTACTTCCTCGGTACTACTGACTGGTACTAC | + |
Preference number: 3 (lower is better) Translates to: SFIHRSFLSTTD*YYFLGTTDWYY Trigger: GTAGTACCAGTCAGTAGTACCGAGGAAGTAGTACCAGTCAGTAGTACTGAGGAAGGAGCGGTGAATGAATGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CAA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGCTTCCTGCTGAGCCATaGTGCTGGCCCCAGTTTTTG | + |
Preference number: 3 (lower is better) Translates to: LIPLATSSELTCIFFPFLLPAEP*CWPQFL Trigger: CAAAAACTGGGGCCAGCACAATGGCTCAGCAGGAAG...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | TACGATGATGAGGAATATATCCTCAGAACTCTCGACTaGATTGTCAGCCAGAGGGGGAATCTCTTACAGAAC | + |
Preference number: 3 (lower is better) Translates to: YDDEEYILRTLD*IVSQRGNLLQN Trigger: GTTCTGTAAGAGATTCCCCCTCTGGCTGACAATTCAGTCGAGAGTTCTGAGGATATATTCCTCATCATCGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | GGGAAATACTTGAACACAGTTTTGTTAAATCTGAGTTaGGGCGAGGAATGCAGAGCCCAAAGTGGACATCGT | + |
Preference number: 3 (lower is better) Translates to: GKYLNTVLLNLS*GEECRAQSGHR Trigger: ACGATGTCCACTTTGGGCTCTGCATTCCTCGCCTCAACTCAGATTTAACAAAACTGTGTTCAAGTATTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TTAAAACCTTTCAAGCATACTTATTTGTGTGTGCACTaGCATCTGTTGAGTGTGGAGACCAGAGGACAACCC | + |
Preference number: 3 (lower is better) Translates to: LKPFKHTYLCVH*HLLSVETRGQP Trigger: GGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCAGTGCACACACAAATAAGTATGCTTGAAAGGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR TCA 72 bp | TTTCTGCAATACCTGGCACCTCTACCGATTTCCTTTTaGAATCACCTTTCCTCCGTTTTTAGCCGATCTGAT | + |
Preference number: 3 (lower is better) Translates to: FLQYLAPLPISF*NHLSSVFSRSD Trigger: ATCAGATCGGCTAAAAACGGAGGAAAGGTGATTTCAAAAGGAAATCGGTAGAGGTGCCAGGTATTGCAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CCA 72 bp | TATTATATGAGGATAAAAATCCCAAATCCTTGGAACTaGACAGATGGCTTAGCTGGCTGCTCTTGCAAGAGG | + |
Preference number: 3 (lower is better) Translates to: YYMRIKIPNPWN*TDGLAGCSCKR Trigger: CCTCTTGCAAGAGCAGCCAGCTAAGCCATCTGTCCAGTTCCAAGGATTTGGGATTTTTATCCTCATATAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CAA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTATAAGAATGAGTGTTTaGCCTGCCTGCATGTATGTC | + |
Preference number: 3 (lower is better) Translates to: EQGLYFLKAECGRLYFNAIRMSV*PACMYV Trigger: GACATACATGCAGGCAGGCAAAACACTCATTCTTAT...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR-3UTR CAA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTGTTTCCTTCTCTCTTaGGGATTTGCAATAGTGTGT | + |
Preference number: 3 (lower is better) Translates to: IRLPRKQKNELLPFALLYCFLLS*GFAIVC Trigger: ACACACTATTGCAAATCCCAAAGAGAGAAGGAAACA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CAA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGTTCAAGCATACTTATTaGTGTGTGCACTGGCATCTG | + |
Preference number: 3 (lower is better) Translates to: LIPLATSSELTCIFFPFLFKHTY*CVHWHL Trigger: CAGATGCCAGTGCACACACAAATAAGTATGCTTGAA...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CAA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACATTGTGTTAGATGCATaGAATGCATTGAGAATAGCC | + |
Preference number: 3 (lower is better) Translates to: IRLPRKQKNELLPFALLYIVLDA*NALRIA Trigger: GGCTATTCTCAATGCATTCAATGCATCTAACACAAT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CAA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGCTTGAGTCAAAGAAGTaGAGGAAGGTCTGGATAATA | + |
Preference number: 3 (lower is better) Translates to: LIPLATSSELTCIFFPFLLESKK*RKVWII Trigger: TATTATCCAGACCTTCCTCAACTTCTTTGACTCAAG...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 72 bp | TTTATAGACTTGTTTTATAAGAATGAGTGTTTTGCCTaGCTGCATGTATGTCTGTATGGCACATGTGTACCT | + |
Preference number: 3 (lower is better) Translates to: FIDLFYKNECFA*LHVCLYGTCVP Trigger: AGGTACACATGTGCCATACAGACATACATGCAGGCAGGCAAAACACTCATTCTTATAAAACAAGTCTATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR GCA 72 bp | ACGTATATTAGGCAAGTATTATTATACCAGCTGAGCTaGATCCTAGCCCTCACAAATATTTTCACTTTTACC | + |
Preference number: 3 (lower is better) Translates to: TYIRQVLLYQLS*ILALTNIFTFT Trigger: GGTAAAAGTGAAAATATTTGTGAGGGCTAGGATGCAGCTCAGCTGGTATAATAATACTTGCCTAATATACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 72 bp | AACAAATCTCAGTATAGCAACTATTTCTGCAATACCTaGCACCTCTACCGATTTCCTTTTGAAATCACCTTT | + |
Preference number: 3 (lower is better) Translates to: NKSQYSNYFCNT*HLYRFPFEITF Trigger: AAAGGTGATTTCAAAAGGAAATCGGTAGAGGTGCCAGGTATTGCAGAAATAGTTGCTATACTGAGATTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR-3UTR CAA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGACTGCTACTTTCATGTaGCAAATGGAAAAATTCTGG | + |
Preference number: 3 (lower is better) Translates to: LIPLATSSELTCIFFPFLTATFM*QMEKFW Trigger: CCAGAATTTTTCCATTTGCAACATGAAAGTAGCAGT...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 72 bp | TACCTTTTATCCCACTATCCACTCTCCTCTCTAAAATaGATTTGCCTTAATAGCCATCGATTACTTTCTTTT | + |
Preference number: 3 (lower is better) Translates to: YLLSHYPLSSLK*ICLNSHRLLSF Trigger: AAAAGAAAGTAATCGATGGCTATTAAGGCAAATCCATTTTAGAGAGGAGAGTGGATAGTGGGATAAAAGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 72 bp | GGGACAGCTACTATGATACTGTTTGAATACTTCTCTTaGCCTAAATATTCGTTAATTAGGCTACCTTTTATC | + |
Preference number: 3 (lower is better) Translates to: GTATMILFEYFS*PKYSLIRLPFI Trigger: GATAAAAGGTAGCCTAATTAACGAATATTTAGGCCAAGAGAAGTATTCAAACAGTATCATAGTAGCTGTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 72 bp | AGGCACGATAAAGAATATAAATTGTGTATCAATTATTaGCAGAAAACCCGATTCTTTACAAAGCCCACACAA | + |
Preference number: 3 (lower is better) Translates to: RHDKEYKLCINY*QKTRFFTKPTQ Trigger: TTGTGTGGGCTTTGTAAAGAATCGGGTTTTCTGCCAATAATTGATACACAATTTATATTCTTTATCGTGCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CCA 72 bp | GAGAATAGTCTTGAGTCAAAGAAGTTGAGGAAGGTCTaGATAATATCCCTAGATTGTCTTAAAACAATAACA | + |
Preference number: 3 (lower is better) Translates to: ENSLESKKLRKV*IISLDCLKTIT Trigger: TGTTATTGTTTTAAGACAATCTAGGGATATTATCCAGACCTTCCTCAACTTCTTTGACTCAAGACTATTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTCCGAATGCTCCCCAATaGGGTTCACGTCAGGAAGGG | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYAPNAPQ*GSRQEG Trigger: CCCTTCCTGACGTGAACCTCATTGGGGAGCATTCGG...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTCATCCTTCCGAGCTCTaGTGCATCCGAATGCTCCCC | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYAHPSEL*CIRMLP Trigger: GGGGAGCATTCGGATGCAGCAGAGCTCGGAAGGATG...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTCTACCTTGCTGTGGCTaGCTGGACATGGCCTGGGTA | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYALPCCG*LDMAWV Trigger: TACCCAGGCCATGTCCAGCCAGCCACAGCAAGGTAG...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | TGGCATCTGTTGAGTGTGGAGACCAGAGGACAACCCTaGGGAGTTGCTGTCCCCTGTCACCTAGGCCCCAGG | + |
Preference number: 4 (lower is better) Translates to: WHLLSVETRGQP*GVAVPCHLGPR Trigger: CCTGGGGCCTAGGTGACAGGGGACAGCAACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTCAGCACAGCCTAGAATaGGCTGCAGCATCCTTCCGA | + |
Preference number: 4 (lower is better) Translates to: PAALVCPGGCLTACLNICQHSLE*AAASFR Trigger: TCGGAAGGATGCTGCAGCTCATTCTAGGCTGTGCTG...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTTCATCCTTTAGAGACTaGGCTTCGTCTGCCAAAGTG | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYASSFRD*ASSAKV Trigger: CACTTTGGCAGACGAAGCTCAGTCTCTAAAGGATGA...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTACTCTTCCTCCAGACTaGCAGTGTTCTGCATGTACA | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYATLPPD*QCSACT Trigger: TGTACATGCAGAACACTGTCAGTCTGGAGGAAGAGT...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTTCTGCTGCATCCGAATaGTCCCCAATGAGGTTCACG | + |
Preference number: 4 (lower is better) Translates to: PAALVCPGGCLTACLNICSAASE*SPMRFT Trigger: CGTGAACCTCATTGGGGAGCATTCGGATGCAGCAGA...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTGAAGAACCTGGGACATaGCAACGCCGTTCGTTAAGT | + |
Preference number: 4 (lower is better) Translates to: PAALVCPGGCLTACLNICEEPGT*QRRSLS Trigger: ACTTAACGAACGGCGTTGTCATGTCCCAGGTTCTTC...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTATGTCTTCTTCCTGCTaGGCTATTGGGATCTTCTAT | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYAMSSSC*AIGIFY Trigger: ATAGAAGATCCCAATAGCCCAGCAGGAAGAAGACAT...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | GACTACACAAGGACTCACAGTGGTCCCCGAGGAGGCTaGCAAGCACAGGAAGAACATGGGCTCTTTCCAGTT | + |
Preference number: 4 (lower is better) Translates to: DYTRTHSGPRGG*QAQEEHGLFPV Trigger: AACTGGAAAGAGCCCATGTTCTTCCTGTGCTTGCAAGCCTCCTCGGGGACCACTGTGAGTCCTTGTGTAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | ACGATTCATGCGTATAATCCAAGAAGACCATGTGTTCATGGCAGCCTGGGTTACGTGAGCTGCCCCTCCTaGGCCTGCACACAACGCAAC | + |
Preference number: 4 (lower is better) Translates to: TIHAYNPRRPCVHGSLGYVSCPS*ACTQRN Trigger: GTTGCGTTGTGTGCAGGCTCAGGAGGGGCAGCTCAC...GTAACCCAGGCTGCCATGAACACATGGTCTTCTTGGATTATACGCATGAATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCATTAACCCTTGAGTGGTaGGCTGCCCCTCCTGAGCCT | + |
Preference number: 4 (lower is better) Translates to: NPETEVPTGNSTYSRNGALTLEW*AAPPEP Trigger: AGGCTCAGGAGGGGCAGCTCACCACTCAAGGGTTAA...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTCTGTCTGAAGATTCCTaGCTTCCCAGAGGCATTAAC | + |
Preference number: 4 (lower is better) Translates to: PAALVCPGGCLTACLNICLSEDS*LPRGIN Trigger: GTTAATGCCTCTGGGAAGCCAGGAATCTTCAGACAG...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTTCAGATAATCTATTTTaGAGCTCTACAACTTGTCTC | + |
Preference number: 4 (lower is better) Translates to: CCPLSPRPQEVSPGKCYASDNLF*SSTTCL Trigger: GAGACAAGTTGTAGAGCTGCAAAATAGATTATCTGA...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTAAGAGCTTGAATTTCTaGTGCTGCTCCTTGATTCTG | + |
Preference number: 4 (lower is better) Translates to: PAALVCPGGCLTACLNICKSLNF*CCSLIL Trigger: CAGAATCAAGGAGCAGCACCAGAAATTCAAGCTCTT...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCATGGCTGGACATGGCCTaGGTAGGATCTTCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: NPETEVPTGNSTYSRNGAWLDMA*VGSSCA Trigger: AGCACAAGAAGATCCTACCCAGGCCATGTCCAGCCA...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | AACATTTTCCACAGAGGGCATCTGACTTCACCTGCCTaGTCCCAACTGGACCCCCACATTTGCATGTTCTTG | + |
Preference number: 4 (lower is better) Translates to: NIFHRGHLTSPA*SQLDPHICMFL Trigger: CAAGAACATGCAAATGTGGGGGTCCAGTTGGGACAAGGCAGGTGAAGTCAGATGCCCTCTGTGGAAAATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | ACTACTTCCTCGGTACTACTGACTGGGCGTAGGGTCTaGATTATCCTAGGTAAAAGGCCTCACTTCCCATCC | + |
Preference number: 4 (lower is better) Translates to: TTSSVLLTGRRV*IILGKRPHFPS Trigger: GGATGGGAAGTGAGGCCTTTTACCTAGGATAATCAAGACCCTACGCCCAGTCAGTAGTACCGAGGAAGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCAGTCATGACGACATGCTaGACAGATTCCTCCATCATC | + |
Preference number: 4 (lower is better) Translates to: NPETEVPTGNSTYSRNGAVMTTC*TDSSII Trigger: GATGATGGAGGAATCTGTTCAGCATGTCGTCATGAC...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTATGGCTCTCTTTTTCTaGAATTCATTGTTGGCTTCA | + |
Preference number: 4 (lower is better) Translates to: PAALVCPGGCLTACLNICMALFF*NSLLAS Trigger: TGAAGCCAACAATGAATTGCAGAAAAAGAGAGCCAT...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTTGCTGCAAGGCTGTCTaGAGATTCCTGGCTTCCCAG | + |
Preference number: 4 (lower is better) Translates to: EQGLYFLKAECGRLYFNACCKAV*RFLASQ Trigger: CTGGGAAGCCAGGAATCTTCAGACAGCCTTGCAGCA...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTCGCGGTCTGGCACGGTaGATCCACATTAAAGGTCTG | + |
Preference number: 4 (lower is better) Translates to: EQGLYFLKAECGRLYFNARGLAR*IHIKGL Trigger: CAGACCTTTAATGTGGATGCACCGTGCCAGACCGCG...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | ACGATTCATGCGTATAATCCAAGAAGACCATGTGTTCATGGCAGCCTGGGTTACCTTCGTCTGCCAAAGTaGTCAGCTCATCGTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: TIHAYNPRRPCVHGSLGYLRLPK*SAHRSA Trigger: AGCAGAACGATGAGCTGACCACTTTGGCAGACGAAG...GTAACCCAGGCTGCCATGAACACATGGTCTTCTTGGATTATACGCATGAATCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACAAGTCCTCCGCGGTCTaGCACGGTGCATCCACATTA | + |
Preference number: 4 (lower is better) Translates to: VKDKVTKDRRERNPHEKHKSSAV*HGASTL Trigger: TAATGTGGATGCACCGTGCCAGACCGCGGAGGACTT...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | ACGATTCATGCGTATAATCCAAGAAGACCATGTGTTCATGGCAGCCTGGGTTACTCTTTCTCTAATGAGTaGAAGAGTCGGTCCCGTTCC | + |
Preference number: 4 (lower is better) Translates to: TIHAYNPRRPCVHGSLGYSFSNE*KSRSRS Trigger: GGAACGGGACCGACTCTTCCACTCATTAGAGAAAGA...GTAACCCAGGCTGCCATGAACACATGGTCTTCTTGGATTATACGCATGAATCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | TTCAAGCATACTTATTTGTGTGTGCACTGGCATCTGTaGAGTGTGGAGACCAGAGGACAACCCTTGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: FKHTYLCVHWHL*SVETRGQPLGV Trigger: AACTCCCAAGGGTTGTCCTCTGGTCTCCACACTCAACAGATGCCAGTGCACACACAAATAAGTATGCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCAATCATCATAATGGCTTaGATGTACTCTTGCTTCTGC | + |
Preference number: 4 (lower is better) Translates to: NPETEVPTGNSTYSRNGAIIIMA*MYSCFC Trigger: GCAGAAGCAAGAGTACATTCAAGCCATTATGATGAT...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGACCTTCCGAGCTCTGCTaGATCCGAATGCTCCCCAAT | + |
Preference number: 4 (lower is better) Translates to: PFTEGNPPNIKDRANNSRPSELC*IRMLPN Trigger: ATTGGGGAGCATTCGGATGCAGCAGAGCTCGGAAGG...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACCAGCCTAGAATGAGCTaGAGCATCCTTCCGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: VKDKVTKDRRERNPHEKHQPRMS*SILPSS Trigger: AGAGCTCGGAAGGATGCTGCAGCTCATTCTAGGCTG...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCATCTGCAATTCATTGTTaGCTTCATGCAGCTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: NPETEVPTGNSTYSRNGASAIHC*LHAASL Trigger: TAGAGAAGCTGCATGAAGCCAACAATGAATTGCAGA...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCATCCTGCAAAGATTTTTaGAGTTCTTCTACTTGTGAC | + |
Preference number: 4 (lower is better) Translates to: NPETEVPTGNSTYSRNGASCKDF*SSSTCD Trigger: GTCACAAGTAGAAGAACTGCAAAAATCTTTGCAGGA...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | AGGGAAATACTTGAACACAGTTTTGTTAAATCTGAGTaGAGGCGAGGAATGCAGAGCCCAAAGTGGACATCG | + |
Preference number: 4 (lower is better) Translates to: REILEHSFVKSE*RRGMQSPKWTS Trigger: CGATGTCCACTTTGGGCTCTGCATTCCTCGCCTCAACTCAGATTTAACAAAACTGTGTTCAAGTATTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTTGGCTGCTTCTAGTCTaGATGTTTCTTCTTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: EQGLYFLKAECGRLYFNAWLLLV*MFLLAA Trigger: AGCTGCAAGAAGAAACATTCAGACTAGAAGCAGCCA...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTATGTACTCTTGCTTCTaGTCACAGTTCACAGCACAG | + |
Preference number: 4 (lower is better) Translates to: EQGLYFLKAECGRLYFNAMYSCF*SQFTAQ Trigger: CTGTGCTGTGAACTGTGAGCAGAAGCAAGAGTACAT...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | ACGATTCATGCGTATAATCCAAGAAGACCATGTGTTCATGGCAGCCTGGGTTACAGCTTGAATTTCTGGTaGTGCTCCTTGATTCTGTTT | + |
Preference number: 4 (lower is better) Translates to: TIHAYNPRRPCVHGSLGYSLNFW*CSLILF Trigger: AAACAGAATCAAGGAGCAGCACCAGAAATTCAAGCT...GTAACCCAGGCTGCCATGAACACATGGTCTTCTTGGATTATACGCATGAATCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACGGTAGGATCTTCTTGTaGTGGTTGCTTGTCTTTGCC | + |
Preference number: 4 (lower is better) Translates to: VKDKVTKDRRERNPHEKHGRIFL*WLLVFA Trigger: GGCAAAGACAAGCAACCAGCACAAGAAGATCCTACC...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | AGGCAGAGGCAGGAGAATAGTCTTGAGTCAAAGAAGTaGAGGAAGGTCTGGATAATATCCCTAGATTGTCTT | + |
Preference number: 4 (lower is better) Translates to: RQRQENSLESKK*RKVWIISLDCL Trigger: AAGACAATCTAGGGATATTATCCAGACCTTCCTCAACTTCTTTGACTCAAGACTATTCTCCTGCCTCTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CAA 72 bp | CTCTGCATGCCTGGGGATTGTCTTTTACTCACTCGCTaGTTCTTCTCACGGCATTTAATTCTTTCACATTTG | + |
Preference number: 4 (lower is better) Translates to: LCMPGDCLLLTR*FFSRHLILSHL Trigger: CAAATGTGAAAGAATTAAATGCCGTGAGAAGAACAAGCGAGTGAGTAAAAGACAATCCCCAGGCATGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
3UTR CAA 72 bp | ATGATGAGGAATATATCCTCAGAACTCTCGACTGAATaGTCAGCCAGAGGGGGAATCTCTTACAGAACAAAG | + |
Preference number: 4 (lower is better) Translates to: MMRNISSELSTE*SARGGISYRTK Trigger: CTTTGTTCTGTAAGAGATTCCCCCTCTGGCTGACAATTCAGTCGAGAGTTCTGAGGATATATTCCTCATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACTCTGGTGCTGCTCCTTaGTTCTGTTTAGGGTCTAAT | + |
Preference number: 4 (lower is better) Translates to: VKDKVTKDRRERNPHEKHSGAAP*FCLGSN Trigger: ATTAGACCCTAAACAGAATCAAGGAGCAGCACCAGA...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTGCAGTGCTGCAACCTaGATATCCAATTCATGGCAT | + |
Preference number: 4 (lower is better) Translates to: IRLPRKQKNELLPFALLYCSAAT*ISNSWH Trigger: ATGCCATGAATTGGATATGCAGGTTGCAGCACTGCA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
CDS-3UTR CCA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACCCTTGTTTCTTCCAATaGAAAGCCATCCTAGGCACA | + |
Preference number: 4 (lower is better) Translates to: VKDKVTKDRRERNPHEKHPCFFQ*KAILGT Trigger: TGTGCCTAGGATGGCTTTCCATTGGAAGAAACAAGG...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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3UTR CAA 72 bp | TCTGTACTGAGTTACAGTAACGACCCCGTGACTTGTTaGGAAATTGACAATAATGTTCTGATTCTGCTGCCT | + |
Preference number: 4 (lower is better) Translates to: SVLSYSNDPVTC*EIDNNVLILLP Trigger: AGGCAGCAGAATCAGAACATTATTGTCAATTTCCAAACAAGTCACGGGGTCGTTACTGTAACTCAGTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGAACAGGATCTATCTTCTaGAGAACCTGGGACATGACA | + |
Preference number: 4 (lower is better) Translates to: PFTEGNPPNIKDRANNSRTGSIF*RTWDMT Trigger: TGTCATGTCCCAGGTTCTTCAGAAGATAGATCCTGT...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
CDS-3UTR TCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGACTTGAATGGCTGTCATaGCGACATGCTGAACAGATT | + |
Preference number: 4 (lower is better) Translates to: PFTEGNPPNIKDRANNSRLEWLS*RHAEQI Trigger: AATCTGTTCAGCATGTCGTCATGACAGCCATTCAAG...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTTACTCATTAGCTCTTaGATGGCTGTCATGACGACA | + |
Preference number: 4 (lower is better) Translates to: IRLPRKQKNELLPFALLYLLISS*MAVMTT Trigger: TGTCGTCATGACAGCCATTCAAGAGCTAATGAGTAA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
||
CDS-3UTR TCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGAACTTCTAGAAGTCTCTaGTTCACAAGCCTGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: PFTEGNPPNIKDRANNSRTSRSL*FTSLFS Trigger: GGAGAACAGGCTTGTGAATCAGAGACTTCTAGAAGT...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CCA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTAACGCAACTCTTCAATaGTTTCCTTCAGAGAATCTC | + |
Preference number: 4 (lower is better) Translates to: EQGLYFLKAECGRLYFNANATLQ*FPSENL Trigger: GAGATTCTCTGAAGGAAACCATTGAAGAGTTGCGTT...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACAATTCATGGCATCTTTaGGCAATTTCCTCCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: IRLPRKQKNELLPFALLYNSWHL*AISSFA Trigger: AGCAAAGGAGGAAATTGCTCAAAGATGCCATGAATT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTCTCCAGCTCATTCTTaGGTAGATTTGCATCATCTA | + |
Preference number: 4 (lower is better) Translates to: IRLPRKQKNELLPFALLYSPAHS*VDLHHL Trigger: TAGATGATGCAAATCTACGCAAGAATGAGCTGGAGA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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3UTR CAA 72 bp | ATTCCTTTATTATATGAGGATAAAAATCCCAAATCCTaGGAACTGGACAGATGGCTTAGCTGGCTGCTCTTG | + |
Preference number: 4 (lower is better) Translates to: IPLLYEDKNPKS*ELDRWLSWLLL Trigger: CAAGAGCAGCCAGCTAAGCCATCTGTCCAGTTCCAAGGATTTGGGATTTTTATCCTCATATAATAAAGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTCATCTAGAAGGCTCTaGAATAAGGCAATTTTCTCA | + |
Preference number: 4 (lower is better) Translates to: IRLPRKQKNELLPFALLYSSRRL*NKAIFS Trigger: TGAGAAAATTGCCTTATTGCAGAGCCTTCTAGATGA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGATCATTGTTGGCTTCATaGAGCTTCTCTAGATGTTCT | + |
Preference number: 4 (lower is better) Translates to: PFTEGNPPNIKDRANNSRSLLAS*SFSRCS Trigger: AGAACATCTAGAGAAGCTGCATGAAGCCAACAATGA...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR TCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGTCTGCTTTTGAACCTTaGTCCTGCAAAGATTTTTGC | + |
Preference number: 4 (lower is better) Translates to: LIPLATSSELTCIFFPFLSAFEP*SCKDFC Trigger: GCAAAAATCTTTGCAGGATCAAGGTTCAAAAGCAGA...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACTTCCGTAAAGCCTCTTaGAATTCTTCAATTCTTAAG | + |
Preference number: 4 (lower is better) Translates to: IRLPRKQKNELLPFALLYFRKAS*NSSILK Trigger: CTTAAGAATTGAAGAATTGCAAGAGGCTTTACGGAA...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR GCA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGTTGAATTTCTGGTGCTaGTCCTTGATTCTGTTTAGG | + |
Preference number: 4 (lower is better) Translates to: LIPLATSSELTCIFFPFLLNFWC*SLILFR Trigger: CCTAAACAGAATCAAGGAGCAGCACCAGAAATTCAA...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS CCA 90 bp | AGAACCTGGGACATGACAACGCCGTTCGTTAAGTCCTCCGCGGTCTaGCACGGTGCATCCACATTAAAGGTCTGGATCCAAGTGAGCAGG | + |
Preference number: 5 (lower is better) Translates to: RTWDMTTPFVKSSAV*HGASTLKVWIQVSR Trigger: CCTGCTCACTTGGATCCAGACCTTTAATGTGGATGCACCGTGCCAGACCGCGGAGGACTTAACGAACGGCGTTGTCATGTCCCAGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | TGCTGTCCCCTGTCACCTAGGCCCCAGGAAGTGAGCCCAGGCAAGTGCTACGCTGTCTCCAGCTCATTCTaGCGTAGATTTGCATCATCT | + |
Preference number: 5 (lower is better) Translates to: CCPLSPRPQEVSPGKCYAVSSSF*RRFASS Trigger: AGATGATGCAAATCTACGCAAGAATGAGCTGGAGAC...AGCGTAGCACTTGCCTGGGCTCACTTCCTGGGGCCTAGGTGACAGGGGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 90 bp | GAATGTACTCTTGCTTCTGCTCACAGTTCACAGCACAGCCTAGAATaGGCTGCAGCATCCTTCCGAGCTCTGCTGCATCCGAATGCTCCC | + |
Preference number: 5 (lower is better) Translates to: ECTLASAHSSQHSLE*AAASFRALLHPNAP Trigger: GGGAGCATTCGGATGCAGCAGAGCTCGGAAGGATGCTGCAGCTCATTCTAGGCTGTGCTGTGAACTGTGAGCAGAAGCAAGAGTACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTACTACTTTTCTCCTCTaGCAGTGCTGCAACCTGCAT | + |
Preference number: 5 (lower is better) Translates to: PAALVCPGGCLTACLNICTTFLL*QCCNLH Trigger: ATGCAGGTTGCAGCACTGCAAGAGGAGAAAAGTAGT...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTCAATTCATGGCATCTTaGAGCAATTTCCTCCTTTGC | + |
Preference number: 5 (lower is better) Translates to: PAALVCPGGCLTACLNICQFMAS*SNFLLC Trigger: GCAAAGGAGGAAATTGCTCAAAGATGCCATGAATTG...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTAGAGTCATTCCCATATaGTACCAGGCACTAACAATG | + |
Preference number: 5 (lower is better) Translates to: PAALVCPGGCLTACLNICRVIPI*YQALTM Trigger: CATTGTTAGTGCCTGGTACAATATGGGAATGACTCT...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 90 bp | TATCGTCGAAATATACAGGATCTATCTTCTGAAGAACCTGGGACATaGCAACGCCGTTCGTTAAGTCCTCCGCGGTCTGGCACGGTGCAT | + |
Preference number: 5 (lower is better) Translates to: YRRNIQDLSSEEPGT*QRRSLSPPRSGTVH Trigger: ATGCACCGTGCCAGACCGCGGAGGACTTAACGAACGGCGTTGTCATGTCCCAGGTTCTTCAGAAGATAGATCCTGTATATTTCGACGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | CCTGCTGCTTTGGTCTGCCCAGGCGGATGCCTCACAGCCTGCTTGAACATTTGTTTGATTTTTAAGAGCTaGAATTTCTGGTGCTGCTCC | + |
Preference number: 5 (lower is better) Translates to: PAALVCPGGCLTACLNICLIFKS*NFWCCS Trigger: GGAGCAGCACCAGAAATTCAAGCTCTTAAAAATCAA...ACAAATGTTCAAGCAGGCTGTGAGGCATCCGCCTGGGCAGACCAAAGCAGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | AATCCTGAGACTGAGGTGCCAACAGGAAACAGCACGTACAGCAGAAATGGAGCATCTTGTGCTGGTTGCTaGTCTTTGCCTAGCCAGAAA | + |
Preference number: 5 (lower is better) Translates to: NPETEVPTGNSTYSRNGASCAGC*SLPSQK Trigger: TTTCTGGCTAGGCAAAGACAAGCAACCAGCACAAGA...TGCTCCATTTCTGCTGTACGTGCTGTTTCCTGTTGGCACCTCAGTCTCAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 90 bp | TTATCAGAAGAGTGTCTGAGAACGTCTATTTCATCCTTTAGAGACTaGGCTTCGTCTGCCAAAGTGGTCAGCTCATCGTTCTGCTGCCGA | + |
Preference number: 5 (lower is better) Translates to: LSEECLRTSISSFRD*ASSAKVVSSSFCCR Trigger: TCGGCAGCAGAACGATGAGCTGACCACTTTGGCAGACGAAGCTCAGTCTCTAAAGGATGAAATAGACGTTCTCAGACACTCTTCTGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS CCA 90 bp | GAACGTCTATTTCATCCTTTAGAGACTGAGCTTCGTCTGCCAAAGTaGTCAGCTCATCGTTCTGCTGCCGAAGCTCAGAGATTTCCTTTT | + |
Preference number: 5 (lower is better) Translates to: ERLFHPLETELRLPK*SAHRSAAEAQRFPF Trigger: AAAAGGAAATCTCTGAGCTTCGGCAGCAGAACGATGAGCTGACCACTTTGGCAGACGAAGCTCAGTCTCTAAAGGATGAAATAGACGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 90 bp | GCGGCATTAGCTTTTCTTAACTCTTCCTCCAGACTGACAGTGTTCTaGATGTACATCGTATTCTTTTCTTCCAAGAGCTTAACCTGCCGC | + |
Preference number: 5 (lower is better) Translates to: AALAFLNSSSRLTVF*MYIVFFSSKSLTCR Trigger: GCGGCAGGTTAAGCTCTTGGAAGAAAAGAATACGATGTACATGCAGAACACTGTCAGTCTGGAGGAAGAGTTAAGAAAAGCTAATGCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037182.14 ENSMUST00000147613.3 |
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CDS-3UTR CAA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACCTTCCTGCTGGGCTATaGGGATCTTCTATAGAATCA | + |
Preference number: 5 (lower is better) Translates to: IRLPRKQKNELLPFALLYLPAGL*GSSIES Trigger: TGATTCTATAGAAGATCCCAATAGCCCAGCAGGAAG...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTCTGAATCTTCTGCTTTaGAACCTTGATCCTGCAAAG | + |
Preference number: 5 (lower is better) Translates to: EQGLYFLKAECGRLYFNALNLLL*NLDPAK Trigger: CTTTGCAGGATCAAGGTTCAAAAGCAGAAGATTCAG...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 90 bp | TTGTTAAATCTTGGCTCGAGATCTTCAATAATGGCTCTCTTTTTCTaGAATTCATTGTTGGCTTCATGCAGCTTCTCTCTGTTCTCCGTC | + |
Preference number: 5 (lower is better) Translates to: LLNLGSRSSIMALFF*NSLLASCSFSLFSV Trigger: GACGGAGAACAGAGAGAAGCTGCATGAAGCCAACAATGAATTGCAGAAAAAGAGAGCCATTATTGAAGATCTCGAGCCAAGATTTAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147613.3 |
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CDS-3UTR CAA 90 bp | GAACAAGGTCTCTATTTCCTTAAAGCTGAATGTGGACGTCTCTACTTCAACGCTCATCATCATAATGGCTaGAATGTACTCTTGCTTCTG | + |
Preference number: 5 (lower is better) Translates to: EQGLYFLKAECGRLYFNAHHHNG*NVLLLL Trigger: CAGAAGCAAGAGTACATTCAAGCCATTATGATGATG...AGCGTTGAAGTAGAGACGTCCACATTCAGCTTTAAGGAAATAGAGACCTTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGATCTACAACTTGTCTCTaGTATGTCTCAAGCTGTCCC | + |
Preference number: 5 (lower is better) Translates to: PFTEGNPPNIKDRANNSRSTTCL*YVSSCP Trigger: GGGACAGCTTGAGACATACAAGAGACAAGTTGTAGA...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACTTGCAGCTCTACAACTaGTCTCTTGTATGTCTCAAG | + |
Preference number: 5 (lower is better) Translates to: VKDKVTKDRRERNPHEKHLQLYN*SLVCLK Trigger: CTTGAGACATACAAGAGACAAGTTGTAGAGCTGCAA...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACATTCTTAAGGAGCTGTaGTTAAATCTTGGCTCGAGA | + |
Preference number: 5 (lower is better) Translates to: IRLPRKQKNELLPFALLYILKEL*LNLGSR Trigger: TCTCGAGCCAAGATTTAACAACAGCTCCTTAAGAAT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | CCATTTACTGAAGGAAATCCACCAAACATTAAAGACAGAGCAAACAACAGCAGAGTCCCGTTCCTGCAGTaGATTTTTAAGAGCTTGAAT | + |
Preference number: 5 (lower is better) Translates to: PFTEGNPPNIKDRANNSRVPFLQ*IFKSLN Trigger: ATTCAAGCTCTTAAAAATCAACTGCAGGAACGGGAC...TCTGCTGTTGTTTGCTCTGTCTTTAATGTTTGGTGGATTTCCTTCAGTAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | GTAAAGGACAAAGTAACCAAAGATAGGAGAGAGAGGAATCCTCATGAGAAACACGAGACAAGTTTCATATaGTACCAGGCACTAACAATG | + |
Preference number: 5 (lower is better) Translates to: VKDKVTKDRRERNPHEKHETSFI*YQALTM Trigger: CATTGTTAGTGCCTGGTACAATATGAAACTTGTCTC...GTGTTTCTCATGAGGATTCCTCTCTCTCCTATCTTTGGTTACTTTGTCCTTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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CDS GCA 90 bp | AAATCTAACTTATCTGCTTTCTTTGATTCGTCAGATAATCTATTTTaGAGCTCTACAACTTGTCTCTTGTATGTCTCAAGCTGTCCCCGG | + |
Preference number: 5 (lower is better) Translates to: KSNLSAFFDSSDNLF*SSTTCLLYVSSCPR Trigger: CCGGGGACAGCTTGAGACATACAAGAGACAAGTTGTAGAGCTGCAAAATAGATTATCTGACGAATCAAAGAAAGCAGATAAGTTAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037182.14 ENSMUST00000147613.3 |
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CDS-3UTR CAA 90 bp | ATTAGGCTCCCGAGAAAACAAAAGAATGAACTCCTACCATTTGCTCTTCTGTACATCTTTAACCTCCAATaGTCTCCTACTTCAGTTTTG | + |
Preference number: 5 (lower is better) Translates to: IRLPRKQKNELLPFALLYIFNLQ*SPTSVL Trigger: CAAAACTGAAGTAGGAGACAATTGGAGGTTAAAGAT...GTACAGAAGAGCAAATGGTAGGAGTTCATTCTTTTGTTTTCTCGGGAGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGTTCTGCAATTCATTGTaGGCTTCATGCAGCTTCTCT | + |
Preference number: 5 (lower is better) Translates to: LIPLATSSELTCIFFPFLFCNSL*ASCSFS Trigger: AGAGAAGCTGCATGAAGCCAACAATGAATTGCAGAA...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 90 bp | TTGTTAAATCTTGGCTCGAGATCTTCAATAATGGCTCTCTTTTTCTaGAATTCATTGTTGGCTTCATGCAGCTTCTCTAGATGTTCTTCA | + |
Preference number: 5 (lower is better) Translates to: LLNLGSRSSIMALFF*NSLLASCSFSRCSS Trigger: TGAAGAACATCTAGAGAAGCTGCATGAAGCCAACAATGAATTGCAGAAAAAGAGAGCCATTATTGAAGATCTCGAGCCAAGATTTAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 90 bp | TCTTCCATTTGCTTCATTTCTTCTTCTTTCTTCCGTAAAGCCTCTTaGAATTCTTCAATTCTTAAGGAGCTGTTGTTAAATCTTGGCTCG | + |
Preference number: 5 (lower is better) Translates to: SSICFISSSFFRKAS*NSSILKELLLNLGS Trigger: CGAGCCAAGATTTAACAACAGCTCCTTAAGAATTGAAGAATTGCAAGAGGCTTTACGGAAGAAAGAAGAAGAAATGAAGCAAATGGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS-3UTR CAA 90 bp | TTAATCCCTTTAGCAACTTCTAGTGAGCTGACCTGTATTTTCTTTCCTTTTCTGGTACGGATAACACTCTaGGCCTTCTCTAAGTATTTT | + |
Preference number: 5 (lower is better) Translates to: LIPLATSSELTCIFFPFLVRITL*AFSKYF Trigger: AAAATACTTAGAGAAGGCCAAGAGTGTTATCCGTAC...CAGAAAAGGAAAGAAAATACAGGTCAGCTCACTAGAAGTTGCTAAAGGGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 72 bp | TTCTGCTCACAGTTCACAGCACAGCCTAGAATGAGCTaGAGCATCCTTCCGAGCTCTGCTGCATCCGAATGC | + |
Preference number: 6 (lower is better) Translates to: FCSQFTAQPRMS*SILPSSAASEC Trigger: GCATTCGGATGCAGCAGAGCTCGGAAGGATGCTGCAGCTCATTCTAGGCTGTGCTGTGAACTGTGAGCAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 72 bp | AATATACAGGATCTATCTTCTGAAGAACCTGGGACATaGCAACGCCGTTCGTTAAGTCCTCCGCGGTCTGGC | + |
Preference number: 6 (lower is better) Translates to: NIQDLSSEEPGT*QRRSLSPPRSG Trigger: GCCAGACCGCGGAGGACTTAACGAACGGCGTTGTCATGTCCCAGGTTCTTCAGAAGATAGATCCTGTATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 72 bp | GCTTCGTCTGCCAAAGTGGTCAGCTCATCGTTCTGCTaGCGAAGCTCAGAGATTTCCTTTTCTAACTCCTCA | + |
Preference number: 6 (lower is better) Translates to: ASSAKVVSSSFC*RSSEISFSNSS Trigger: TGAGGAGTTAGAAAAGGAAATCTCTGAGCTTCGGCAGCAGAACGATGAGCTGACCACTTTGGCAGACGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 72 bp | GAGTGTCTGAGAACGTCTATTTCATCCTTTAGAGACTaGGCTTCGTCTGCCAAAGTGGTCAGCTCATCGTTC | + |
Preference number: 6 (lower is better) Translates to: ECLRTSISSFRD*ASSAKVVSSSF Trigger: GAACGATGAGCTGACCACTTTGGCAGACGAAGCTCAGTCTCTAAAGGATGAAATAGACGTTCTCAGACACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 72 bp | ATGGCTCTCTTTTTCTGCAATTCATTGTTGGCTTCATaGAGCTTCTCTCTGTTCTCCGTCTCCAGCTCATTC | + |
Preference number: 6 (lower is better) Translates to: MALFFCNSLLAS*SFSLFSVSSSF Trigger: GAATGAGCTGGAGACGGAGAACAGAGAGAAGCTGCATGAAGCCAACAATGAATTGCAGAAAAAGAGAGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147613.3 |
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CDS CAA 72 bp | GAGTCGGTCCCGTTCCTGCAGTTGATTTTTAAGAGCTaGAATTTCTGGTGCTGCTCCTTGATTCTGTTTAGG | + |
Preference number: 6 (lower is better) Translates to: ESVPFLQLIFKS*NFWCCSLILFR Trigger: CCTAAACAGAATCAAGGAGCAGCACCAGAAATTCAAGCTCTTAAAAATCAACTGCAGGAACGGGACCGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 72 bp | AGTTCTTCTACTTGTGACTGTACTTCTAGAAGTCTCTaGTTCACAAGCCTGTTCTCCGTCTCCAGCTCATTC | + |
Preference number: 6 (lower is better) Translates to: SSSTCDCTSRSL*FTSLFSVSSSF Trigger: GAATGAGCTGGAGACGGAGAACAGGCTTGTGAATCAGAGACTTCTAGAAGTACAGTCACAAGTAGAAGAACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 72 bp | ATGTACATCGTATTCTTTTCTTCCAAGAGCTTAACCTaGCGCCTCAAATCTCCAAGGTCTTCCAGCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: MYIVFFSSKSLT*RLKSPRSSSFF Trigger: GAAGAAGCTGGAAGACCTTGGAGATTTGAGGCGGCAGGTTAAGCTCTTGGAAGAAAAGAATACGATGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037182.14 ENSMUST00000147613.3 |
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CDS CAA 72 bp | GACATGCTGAACAGATTCCTCCATCATCATAATGGCTaGAATGTACTCTTGCTTCTGCTCACAGTTCACAGC | + |
Preference number: 6 (lower is better) Translates to: DMLNRFLHHHNG*NVLLLLLTVHS Trigger: GCTGTGAACTGTGAGCAGAAGCAAGAGTACATTCAAGCCATTATGATGATGGAGGAATCTGTTCAGCATGTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 72 bp | AGCCAATTATCGTCGAAATATACAGGATCTATCTTCTaGAGAACCTGGGACATGACAACGCCGTTCGTTAAG | + |
Preference number: 6 (lower is better) Translates to: SQLSSKYTGSIF*RTWDMTTPFVK Trigger: CTTAACGAACGGCGTTGTCATGTCCCAGGTTCTTCAGAAGATAGATCCTGTATATTTCGACGATAATTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS TCA 72 bp | CTTCACTTCAGGGCAGGCTGGTATTCTCAAACAAACTaGGACAAGTTTCATATTGTACCAGGCACTAACAAT | + |
Preference number: 6 (lower is better) Translates to: LHFRAGWYSQTN*DKFHIVPGTNN Trigger: ATTGTTAGTGCCTGGTACAATATGAAACTTGTCTCAGTTTGTTTGAGAATACCAGCCTGCCCTGAAGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211683.2 |
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CDS CAA 90 bp | CTTGGCTCGAGATCTTCAATAATGGCTCTCTTTTTCTGCAATTCATaGTTGGCTTCATGCAGCTTCTCTAGATGTTCTTCAAGCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: LGSRSSIMALFFCNS*LASCSFSRCSSSFF Trigger: AAAGAAGCTTGAAGAACATCTAGAGAAGCTGCATGAAGCCAACAATGAATTGCAGAAAAAGAGAGCCATTATTGAAGATCTCGAGCCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |
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CDS GCA 72 bp | GCTTTTCTTAACTCTTCCTCCAGACTGACAGTGTTCTaGATGTACATCGTATTCTTTTCTTCCAAGAGCTTA | + |
Preference number: 6 (lower is better) Translates to: AFLNSSSRLTVF*MYIVFFSSKSL Trigger: TAAGCTCTTGGAAGAAAAGAATACGATGTACATGCAGAACACTGTCAGTCTGGAGGAAGAGTTAAGAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037182.14 ENSMUST00000147613.3 |
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CDS GCA 72 bp | TCATTCTTGCGTAGATTTGCATCATCTAGAAGGCTCTaGAATAAGGCAATTTTCTCATTGTCTGAATCCTCT | + |
Preference number: 6 (lower is better) Translates to: SFLRRFASSRRL*NKAIFSLSESS Trigger: AGAGGATTCAGACAATGAGAAAATTGCCTTATTGCAGAGCCTTCTAGATGATGCAAATCTACGCAAGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037182.14 ENSMUST00000147613.3 |
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CDS GCA 72 bp | TTATCTGCTTTCTTTGATTCGTCAGATAATCTATTTTaGAGCTCTACAACTTGTCTCTTGTATGTCTCAAGC | + |
Preference number: 6 (lower is better) Translates to: LSAFFDSSDNLF*SSTTCLLYVSS Trigger: GCTTGAGACATACAAGAGACAAGTTGTAGAGCTGCAAAATAGATTATCTGACGAATCAAAGAAAGCAGATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037182.14 ENSMUST00000147613.3 |
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CDS CAA 72 bp | CTGATCTTTAACCTCCAATTGTCTCCTACTTCAGTTTaGATTCTGTTTAGCCAATTATCGTCGAAATATACA | + |
Preference number: 6 (lower is better) Translates to: LIFNLQLSPTSV*ILFSQLSSKYT Trigger: TGTATATTTCGACGATAATTGGCTAAACAGAATCAAAACTGAAGTAGGAGACAATTGGAGGTTAAAGATCAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037182.14 |