Pregenerated sensors for HOOK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028572Ensembl transcript IDs: ENSMUST00000030306.14, ENSMUST00000107083.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCAACAAGGGTCATGCAGCCTGCAAGTTTACACCTTCACCCAATaGCTGGCAATGTTCTGGGAAAGCACACTGTTGTCTCCCTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: TQQGSCSLQVYTFTQ*LAMFWESTLLSPLC Trigger: ACACAAGGGAGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGGTGTAAACTTGCAGGCTGCATGACCCTTGTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR TCA 90 bp | TCTCTAGAGCACATGGATATAGTTGCAGGCCAGTTTTGCCATAGCTaGACAACTGTCTTTACTCAGTTGGCCCCAATATTTGATCATACC | + |
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Preference number: 1 (lower is better) Translates to: SLEHMDIVAGQFCHS*TTVFTQLAPIFDHT Trigger: GGTATGATCAAATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACTGGCCTGCAACTATATCCATGTGCTCTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR GCA 90 bp | CTGATCCGCTGTTCAAGGTCATCCTTGAACACACTGTCATTTCTATaGCAGTTCAGGATTATGAGACCCTGTCTCAAAGTGAAACCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LIRCSRSSLNTLSFL*QFRIMRPCLKVKPK Trigger: TTTTGGTTTCACTTTGAGACAGGGTCTCATAATCCTGAACTGGCATAGAAATGACAGTGTGTTCAAGGATGACCTTGAACAGCGGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR TCA 90 bp | AATTTCTTCAAGTTACCAAAAACCAAGATTGTGACTCGCTGCACATaGACTCTCAACAAACTCTCAACAATGATGGAAACGTGGCTACAA | + |
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Preference number: 1 (lower is better) Translates to: NFFKLPKTKIVTRCT*TLNKLSTMMETWLQ Trigger: TTGTAGCCACGTTTCCATCATTGTTGAGAGTTTGTTGAGAGTTCATGTGCAGCGAGTCACAATCTTGGTTTTTGGTAACTTGAAGAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 90 bp | ATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTaGAAATTTCTAATGAGTCACTTTTACAGACAAAGTCACTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: IHSSTCSNWHTTQRS*KFLMSHFYRQSHCN Trigger: GTTGCAGTGACTTTGTCTGTAAAAGTGACTCATTAGAAATTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 90 bp | TTGCAGGCCAGTTTTGCCATAGCTGAACAACTGTCTTTACTCAGTTaGCCCCAATATTTGATCATACCAAATTTGCTTAATACAGGAATT | + |
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Preference number: 1 (lower is better) Translates to: LQASFAIAEQLSLLS*PQYLIIPNLLNTGI Trigger: AATTCCTGTATTAAGCAAATTTGGTATGATCAAATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACTGGCCTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR GCA 90 bp | TTGCAAAGAGAGGAAACTATACACACCAGACTAAGGAATTCACCTTaGACAGTTTTTCTCCACATGTGTAACAGGAAACTTTTCCATAAA | + |
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Preference number: 1 (lower is better) Translates to: LQREETIHTRLRNSP*TVFLHMCNRKLFHK Trigger: TTTATGGAAAAGTTTCCTGTTACACATGTGGAGAAAAACTGTGCAAGGTGAATTCCTTAGTCTGGTGTGTATAGTTTCCTCTCTTTGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 90 bp | TATCCTAATAGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTaGCATACAACTCAGAGAAGCTGCAAATTTCTAATGAGTCACTTT | + |
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Preference number: 1 (lower is better) Translates to: YPNSSVLIHSSTCSN*HTTQRSCKFLMSHF Trigger: AAAGTGACTCATTAGAAATTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACTATTAGGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 90 bp | TGCACATACGTGAACATACACACATACCACGATGCTCACTTTTCCTaGTTTACTGATAACAAGGTTAATTTTTATATGTGCAAGAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: CTYVNIHTYHDAHFS*FTDNKVNFYMCKRR Trigger: TCTCCTCTTGCACATATAAAAATTAACCTTGTTATCAGTAAACCAGGAAAAGTGAGCATCGTGGTATGTGTGTATGTTCACGTATGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR CCA 90 bp | ATAACAAGTCATTTACATTCATTTTTACACAAATTGTCAGTACTCTaGCATAAACCACAGTCACTCCCCACATGCCAGATATACCACTAT | + |
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Preference number: 1 (lower is better) Translates to: ITSHLHSFLHKLSVL*HKPQSLPTCQIYHY Trigger: ATAGTGGTATATCTGGCATGTGGGGAGTGACTGTGGTTTATGCCAGAGTACTGACAATTTGTGTAAAAATGAATGTAAATGACTTGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CAA 90 bp | GCCTGCCAGCTCAATCTGGCTTACTCAGCCACCACCACCCCCTTTTaGTTTATATATTACATATCCCTTCTTTCATGCTATGATGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ACQLNLAYSATTTPF*FIYYISLLSCYDEG Trigger: GCCCTCATCATAGCATGAAAGAAGGGATATGTAATATATAAACAAAAAGGGGGTGGTGGTGGCTGAGTAAGCCAGATTGAGCTGGCAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCGGGGTACAGATATTCTaGGGCACTTCCGTTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SVLIHSSTCSNWHTTQRSGVQIF*GTSVVF Trigger: AAACACAACGGAAGTGCCTCAGAATATCTGTACCCC...GCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR CCA 90 bp | CCTTCACCCAATGACTGGCAATGTTCTGGGAAAGCACACTGTTGTCTCCCTTGTAAAGTGACCCCAAATTaGAAAGTAACACCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PSPNDWQCSGKAHCCLPCKVTPN*KVTPLE Trigger: TTCCAGAGGTGTTACTTTCCAATTTGGGGTCACTTT...ACAAGGGAGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CAA 90 bp | GCTGCTACCAAGCATCTTAACCTTTGTTTTCTATCTGGTAGTTTCTaGGGGTACAGATATTCTGAGGCACTTCCGTTGTGTTTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: AATKHLNLCFLSGSF*GYRYSEALPLCLLC Trigger: GCAAAGCAAACACAACGGAAGTGCCTCAGAATATCTGTACCCCAAGAAACTACCAGATAGAAAACAAAGGTTAAGATGCTTGGTAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CAA 90 bp | GAAAGCAATGCCCACAAGAACACCATGCTCCAAAGCATGTGGCTATaGCAAAGTGTAGCTTGCTTTTCATCAGAAACACAAATGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: ESNAHKNTMLQSMWL*QSVACFSSETQMSV Trigger: AACTGACATTTGTGTTTCTGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTTCTTGTGGGCATTGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR TCA 90 bp | AATAGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGGACCCTGTCTCAAAGTaGAACCAAAATAAGACTAGC | + |
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Preference number: 2 (lower is better) Translates to: NSSVLIHSSTCSNWHTTQDPVSK*NQNKTS Trigger: GCTAGTCTTATTTTGGTTTCACTTTGAGACAGGGTC...CTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR TCA 90 bp | AACACCATGCTCCAAAGCATGTGGCTATTGCAAAGTGTAGCTTGCTTTTCATCAGTTCAAGGTCATCCTTaGACACACTGTCATTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: NTMLQSMWLLQSVACFSSVQGHP*THCHFY Trigger: ATAGAAATGACAGTGTGTTCAAGGATGACCTTGAAC...TGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CAA 90 bp | CAAGAACACCATGCTCCAAAGCATGTGGCTATTGCAAAGTGTAGCTaGCTTTTCATCAGAAACACAAATGTCAGTTTACTTCCTATCCTA | + |
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Preference number: 2 (lower is better) Translates to: QEHHAPKHVAIAKCS*LFIRNTNVSLLPIL Trigger: TAGGATAGGAAGTAAACTGACATTTGTGTTTCTGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR CCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATCCTTCACCCAATGACTaGCAATGTTCTGGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LHKLYKERISPWLQLNFYPSPND*QCSGKA Trigger: TGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGG...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR TCA 90 bp | GAACAACTGTCTTTACTCAGTTGGCCCCAATATTTGATCATACCAAATTTGCTTATCTCTTCCATGAACTaGAAACCAACCTTCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: EQLSLLSWPQYLIIPNLLISSMN*KPTFRA Trigger: TGCTCTGAAGGTTGGTTTTCAGTTCATGGAAGAGAT...AAGCAAATTTGGTATGATCAAATATTGGGGCCAACTGAGTAAAGACAGTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATGTTGGAATATGCATTTaGTTTCCCTCACAGGATGCC | + |
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Preference number: 2 (lower is better) Translates to: LHKLYKERISPWLQLNFYVGICI*FPSQDA Trigger: GGCATCCTGTGAGGGAAAGCAAATGCATATTCCAAC...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGCATAAAGTTGGAATATaGATTTGCTTTCCCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLHKVGI*ICFPSQ Trigger: CTGTGAGGGAAAGCAAATGCATATTCCAACTTTATG...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR GCA 90 bp | ATCCATTTTATGCACTCAATCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCGGGCAGCAGTCTCACTaGATAAATTATACAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: IHFMHSIFPSIHLEKSWFGQQSH*INYTRK Trigger: TTTCCTTGTATAATTTATGCAGTGAGACTGCTGCCC...GAACCATGACTTCTCCAAGTGTATTGAAGGGAAGATTGAGTGCATAAAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR GCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATTACAGACAAAGTCACTaGAACAGCAGTTTTCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LHKLYKERISPWLQLNFYYRQSH*NSSFPS Trigger: GCTTGGAAAACTGCTGTTGCAGTGACTTTGTCTGTA...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR TCA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTTTGATATCTCTTCCATaGACTGAAAACCAACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: ICARGDKLPYLRMENLSCLISLP*TENQPS Trigger: TGAAGGTTGGTTTTCAGTTCATGGAAGAGATATCAA...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTAGTTAAGGAGTCATTTTaGTATCTCTTCCATGAACTG | + |
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Preference number: 2 (lower is better) Translates to: THTNEPERIYTLLAGHALVKESF*YLFHEL Trigger: CAGTTCATGGAAGAGATATCAAAATGACTCCTTAAC...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATGCTGATACTGTGCTCTaGTTTCTAAGTAAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LHKLYKERISPWLQLNFYADTVL*FLSKLK Trigger: TTTCAGCTTACTTAGAAAGCAGAGCACAGTATCAGC...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR GCA 90 bp | ATCCATTTTATGCACTCAATCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTTGCAAAGTGTAGCTTaGTTTTCATCAGAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: IHFMHSIFPSIHLEKSWFLQSVA*FSSETQ Trigger: TTGTGTTTCTGATGAAAAGCAAGCTACACTTTGCAA...GAACCATGACTTCTCCAAGTGTATTGAAGGGAAGATTGAGTGCATAAAATGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR TCA 72 bp | GGGTCATGCAGCCTGCAAGTTTACACCTTCACCCAATaGCTGGCAATGTTCTGGGAAAGCACACTGTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: GSCSLQVYTFTQ*LAMFWESTLLS Trigger: AGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGGTGTAAACTTGCAGGCTGCATGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR TCA 72 bp | TTCTTTCATGCTATGATGAGGGCAGAGGTGAGAAGCTaGCCCAACAAGGGTCATGCAGCCTGCAAGTTTACA | + |
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Preference number: 3 (lower is better) Translates to: FFHAMMRAEVRS*PNKGHAACKFT Trigger: TGTAAACTTGCAGGCTGCATGACCCTTGTTGGGTCAGCTTCTCACCTCTGCCCTCATCATAGCATGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 72 bp | ATTCGCTTCATCACACTTCCAACTACTCCAATGTCCTaGCCAGAGACAGAGCTGATACTGTGCTCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: IRFITLPTTPMS*PETELILCSAF Trigger: GAAAGCAGAGCACAGTATCAGCTCTGTCTCTGGGCAGGACATTGGAGTAGTTGGAAGTGTGATGAAGCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR TCA 72 bp | GATGGAAACGTGGCTACAAAGTGTTGGATGTGTGACTaGCTCAAGAGCAAACCACCTGTGGCTACATTAAGC | + |
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Preference number: 3 (lower is better) Translates to: DGNVATKCWMCD*LKSKPPVATLS Trigger: GCTTAATGTAGCCACAGGTGGTTTGCTCTTGAGTCAGTCACACATCCAACACTTTGTAGCCACGTTTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 72 bp | AGATCTGATTTCTACCTGGCTGGGCAGCAGTCTCACTaGATAAATTATACAAGGAAAGAATCTCACCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: RSDFYLAGQQSH*INYTRKESHPG Trigger: ACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAGTGAGACTGCTGCCCAGCCAGGTAGAAATCAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 72 bp | AGCAATGCCCACAAGAACACCATGCTCCAAAGCATGTaGCTATTGCAAAGTGTAGCTTGCTTTTCATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SNAHKNTMLQSM*LLQSVACFSSE Trigger: TTCTGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTTCTTGTGGGCATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 72 bp | TGTTCAAGGTCATCCTTGAACACACTGTCATTTCTATaGCAGTTCAGGATTATGAGACCCTGTCTCAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: CSRSSLNTLSFL*QFRIMRPCLKV Trigger: CACTTTGAGACAGGGTCTCATAATCCTGAACTGGCATAGAAATGACAGTGTGTTCAAGGATGACCTTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR CAA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATTGGGAAAGCACACTGTaGTCTCCCTTGTGTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LHKLYKERISPWLQLNFYWESTL*SPLCLL Trigger: CAGCAGACACAAGGGAGACAACAGTGTGCTTTCCCA...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR TCA 72 bp | AATATAGTTGATTGTGAGGTTGAGAATGCAGCTCGATaGGCAGAGCTTCTGAGTTTGACCCCTAGAACTATA | + |
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Preference number: 3 (lower is better) Translates to: NIVDCEVENAAR*AELLSLTPRTI Trigger: TATAGTTCTAGGGGTCAAACTCAGAAGCTCTGCTCATCGAGCTGCATTCTCAACCTCACAATCAACTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 72 bp | AGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTaGCATACAACTCAGAGAAGCTGCAAATTTCTAATG | + |
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Preference number: 3 (lower is better) Translates to: SSVLIHSSTCSN*HTTQRSCKFLM Trigger: CATTAGAAATTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR CAA 90 bp | ATCCATTTTATGCACTCAATCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCACTAAGGAATTCACCTaGCACAGTTTTTCTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: IHFMHSIFPSIHLEKSWFTKEFT*HSFSPH Trigger: ATGTGGAGAAAAACTGTGCAAGGTGAATTCCTTAGT...GAACCATGACTTCTCCAAGTGTATTGAAGGGAAGATTGAGTGCATAAAATGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 72 bp | ATGCTCCAAAGCATGTGGCTATTGCAAAGTGTAGCTTaGTTTTCATCAGAAACACAAATGTCAGTTTACTTC | + |
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Preference number: 3 (lower is better) Translates to: MLQSMWLLQSVA*FSSETQMSVYF Trigger: GAAGTAAACTGACATTTGTGTTTCTGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 72 bp | AAAATTATACATGATATACTCCTTCTTAGAAAGCAATaGCCACAAGAACACCATGCTCCAAAGCATGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: KIIHDILLLRKQ*PQEHHAPKHVA Trigger: AGCCACATGCTTTGGAGCATGGTGTTCTTGTGGGCATTGCTTTCTAAGAAGGAGTATATCATGTATAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 72 bp | TCCATTTTATGCACTCAATCTTCCCTTCAATACACTTaGAGAAGTCATGGTTCTAGATCTGATTTCTACCTG | + |
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Preference number: 3 (lower is better) Translates to: SILCTQSSLQYT*RSHGSRSDFYL Trigger: CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGATTGAGTGCATAAAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR-3UTR CAA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTACTGTCTTTACTCAGTaGGCCCCAATATTTGATCAT | + |
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Preference number: 3 (lower is better) Translates to: ICARGDKLPYLRMENLSCTVFTQ*APIFDH Trigger: ATGATCAAATATTGGGGCCAACTGAGTAAAGACAGT...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR GCA 72 bp | AGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTaGAAATTTCTAATGAGTCACTTTTACAGACAAAGT | + |
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Preference number: 3 (lower is better) Translates to: STCSNWHTTQRS*KFLMSHFYRQS Trigger: ACTTTGTCTGTAAAAGTGACTCATTAGAAATTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR CCA 72 bp | AGTTTTGCCATAGCTGAACAACTGTCTTTACTCAGTTaGCCCCAATATTTGATCATACCAAATTTGCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: SFAIAEQLSLLS*PQYLIIPNLLN Trigger: ATTAAGCAAATTTGGTATGATCAAATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR CCA 72 bp | GTGAACATACACACATACCACGATGCTCACTTTTCCTaGTTTACTGATAACAAGGTTAATTTTTATATGTGC | + |
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Preference number: 3 (lower is better) Translates to: VNIHTYHDAHFS*FTDNKVNFYMC Trigger: GCACATATAAAAATTAACCTTGTTATCAGTAAACCAGGAAAAGTGAGCATCGTGGTATGTGTGTATGTTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| 3UTR GCA 72 bp | AAATTTCTAATGAGTCACTTTTACAGACAAAGTCACTaGAACAGCAGTTTTCCAAGCATTATAGCTTCTACA | + |
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Preference number: 3 (lower is better) Translates to: KFLMSHFYRQSH*NSSFPSIIAST Trigger: TGTAGAAGCTATAATGCTTGGAAAACTGCTGTTGCAGTGACTTTGTCTGTAAAAGTGACTCATTAGAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| 3UTR GCA 72 bp | ACTATTTCCTCTGATGACTTGTGCTTTATAAATGTGTaGAACAAACAGGATCACAGTAAGACTGTATGTATA | + |
|
Preference number: 3 (lower is better) Translates to: TISSDDLCFINV*NKQDHSKTVCI Trigger: TATACATACAGTCTTACTGTGATCCTGTTTGTTGCACACATTTATAAAGCACAAGTCATCAGAGGAAATAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| 3UTR GCA 72 bp | TCCTGGTTTACTGATAACAAGGTTAATTTTTATATGTaGAAGAGGAGACAAACTTCCTTACTTGAGAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SWFTDNKVNFYM*KRRQTSLLENG Trigger: TCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATATAAAAATTAACCTTGTTATCAGTAAACCAGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCACCCAATGACTGGCAATGTTCTGGGAAAGCACACTGTTGTCTCCCTTGTCGGGTGTTGGTGATGTaGCGCTGCTGCGCTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPNDWQCSGKAHCCLPCRVLVM*RCCAKK Trigger: CTTCTTAGCGCAGCAGCGGCACATCACCAACACCCG...ACAAGGGAGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | AGCGTGCAGAGACTGCAGGAAGGACTGATCCGCTGTTCAAGGTCATCCTTGAACGCTGTAGTTCTCCGATaGGCTCTTTGCTCAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVQRLQEGLIRCSRSSLNAVVLR*ALCSTF Trigger: AAAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGC...GTTCAAGGATGACCTTGAACAGCGGATCAGTCCTTCCTGCAGTCTCTGCACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | GCAGAAATGAACCGAATGCCACAAATACAGCTCCAGACACTCCTTAGAGGCAAGTTGGTGATGTGCCGCTaGTGCGCTAAGAAGGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: AEMNRMPQIQLQTLLRGKLVMCR*CAKKER Trigger: ACGTTCCTTCTTAGCGCAGCAGCGGCACATCACCAA...CTTGCCTCTAAGGAGTGTCTGGAGCTGTATTTGTGGCATTCGGTTCATTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCGTGATGTGCCGCTGCTaGGCTAAGAAGGAACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLIHSSTCSNWHTTQRSVMCRC*AKKERA Trigger: TGCACGTTCCTTCTTAGCGCAGCAGCGGCACATCAC...GCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | GCAGAAATGAACCGAATGCCACAAATACAGCTCCAGACACTCCTTAGAGGCAAGTCCCACCGTGTCACTTaGAGGAGAGATCACTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AEMNRMPQIQLQTLLRGKSHRVT*RRDHYF Trigger: GAAATAGTGATCTCTCCTGCAAGTGACACGGTGGGA...CTTGCCTCTAAGGAGTGTCTGGAGCTGTATTTGTGGCATTCGGTTCATTTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | CAGGCCAGTTTTGCCATAGCTGAACAACTGTCTTTACTCAGTTGGCCCCAATATCAGCTCTTCCTTTTCTaGTATGGCCTCCTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QASFAIAEQLSLLSWPQYQLFLF*YGLLKL Trigger: GAGCTTCAGGAGGCCATAGCAGAAAAGGAAGAGCTG...ATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACTGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCTCCAGTTGCTCCTaGAGCTGCTCAATGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLIHSSTCSNWHTTQRSCSSCS*SCSMRS Trigger: TGAACGCATTGAGCAGCTGCAGGAGCAACTGGAGCA...GCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGTTTTGCCATAGCTGAACAACTGTCTTTACTCAGTTGGCCCCAATATGACATCTTGACAAGGTaGGGCAGTCTTGAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QASFAIAEQLSLLSWPQYDILTR*GSLECL Trigger: CAGACATTCAAGACTGCCTCACCTTGTCAAGATGTC...ATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACTGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCCATCCTAGAATTAGCTaGAGCAACCTCCCAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLIHSSTCSNWHTTQRSHPRIS*SNLPSS Trigger: GGAGCTTGGGAGGTTGCTTCAGCTAATTCTAGGATG...GCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTCTCACTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGCTTCTGCTCCAGTTaGTCCTGCAGCTGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QQSHCINYTRKESHPGYSCFCSS*SCSCSM Trigger: CATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCA...GCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAGTGAGACTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGATCTTGCGGTGCTTCTaGTCCAGTTGCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLILRCF*SSCSCS Trigger: GCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGAT...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | GCAGAAATGAACCGAATGCCACAAATACAGCTCCAGACACTCCTTAGAGGCAAGATTCTCAGAGACCAGTaGATTCTTCTCATCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEMNRMPQIQLQTLLRGKILRDQ*ILLILK Trigger: CTTCAGGATGAGAAGAATTCACTGGTCTCTGAGAAT...CTTGCCTCTAAGGAGTGTCTGGAGCTGTATTTGTGGCATTCGGTTCATTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTCTCACTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTCATTCATCTTGCGGTaGTTCTGCTCCAGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQSHCINYTRKESHPGYSSFILR*FCSSCS Trigger: GGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGA...GCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAGTGAGACTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAAAGCTGTTTGACATCTTaGCAAGGTGAGGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKSCLTS*QGEAVL Trigger: CAAGACTGCCTCACCTTGTCAAGATGTCAAACAGCT...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | GCAGAAATGAACCGAATGCCACAAATACAGCTCCAGACACTCCTTAGAGGCAAGGCTTCTTTTCACAGTTaGCTGCACATCCTAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: AEMNRMPQIQLQTLLRGKASFHS*LHILEL Trigger: TAATTCTAGGATGTGCAGTCAACTGTGAAAAGAAGC...CTTGCCTCTAAGGAGTGTCTGGAGCTGTATTTGTGGCATTCGGTTCATTTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | AATAGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGTCTGCTATGGCCTCCTaGAGCTCTTCTAAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSVLIHSSTCSNWHTTQSAMAS*SSSKAL Trigger: AAGGGCTTTAGAAGAGCTTCAGGAGGCCATAGCAGA...CTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CCTTCACCCAATGACTGGCAATGTTCTGGGAAAGCACACTGTTGTCTCCCTTGTGTTAGTTTTTCCATATaGGCTTCCAACTTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPNDWQCSGKAHCCLPCVSFSI*ASNFCF Trigger: AAAGCAGAAGTTGGAAGCTCATATGGAAAAACTAAC...ACAAGGGAGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | TCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCGCTGAAGGTCTTCAATaGGCTCCTGTTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLIHSSTCSNWHTTQRSAEGLQ*APVSSV Trigger: TACAGAAGAAACAGGAGCTCATTGAAGACCTTCAGC...GCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCCAATGACTGGCAATGTTCTGGGAAAGCACACTGTTGTCTCCCTTGTATTTTGTTTTCATGCTaGAGTCGAATGAACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPNDWQCSGKAHCCLPCILFSC*SRMNTS Trigger: AGAGGTGTTCATTCGACTCCAGCATGAAAACAAAAT...ACAAGGGAGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCCAATGACTGGCAATGTTCTGGGAAAGCACACTGTTGTCTCCCTTGTTCTGCTTTAATTTGCTaGAACTTTCACCTTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PSPNDWQCSGKAHCCLPCSALIC*NFHLQT Trigger: AGTCTGAAGGTGAAAGTTCCAGCAAATTAAAGCAGA...ACAAGGGAGACAACAGTGTGCTTTCCCAGAACATTGCCAGTCATTGGGTGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CCA 90 bp | AATAGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGGTCAGATGCTGCAGCTaGGACCTTAACAGAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSVLIHSSTCSNWHTTQVRCCS*DLNREV Trigger: AACCTCTCTGTTAAGGTCCCAGCTGCAGCATCTGAC...CTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| 3UTR CAA 72 bp | GCCCACAAGAACACCATGCTCCAAAGCATGTGGCTATaGCAAAGTGTAGCTTGCTTTTCATCAGAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: AHKNTMLQSMWL*QSVACFSSETQ Trigger: TTGTGTTTCTGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTTCTTGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGGACATCTTGACAAGGTaGGGCAGTCTTGAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLDILTR*GSLECL Trigger: CAGACATTCAAGACTGCCTCACCTTGTCAAGATGTC...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAATGTATTCCACGGGCATaGTCTCAGCAGCAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKCIPRA*SQQQDF Trigger: AAAATCTTGCTGCTGAGATCATGCCCGTGGAATACA...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGCCGCCAGCTGCTTTCTaGGTAACATTATTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLPPAAF*VTLFLL Trigger: CAGCAGAAATAATGTTACTCAGAAAGCAGCTGGCGG...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAACATCAGCTCCTGAATTaGAGTCATGACCACATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKHQLLN*SHDHML Trigger: CAACATGTGGTCATGACTGCAATTCAGGAGCTGATG...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGAGTTCCTGGCACCTCTaGTTCAGCTCTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLSSWHL*FSSSFS Trigger: AGAAAAGGAAGAGCTGAAGCAGAGGTGCCAGGAACT...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | AGTCATGGTTCTAGATCTGATTTCTACCTGGCTGGGCAGCAGTCTCACTGCATAACGGTAATCATCTTTTaGAGCTTCAAGCCTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHGSRSDFYLAGQQSHCITVIIF*SFKPIV Trigger: AACTATAGGCTTGAAGCTGCAAAAGATGATTACCGT...TATGCAGTGAGACTGCTGCCCAGCCAGGTAGAAATCAGATCTAGAACCATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CCA 90 bp | AACACCATGCTCCAAAGCATGTGGCTATTGCAAAGTGTAGCTTGCTTTTCATCACTTCCTTTTCTGCTATaGCCTCCTGAAGCTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NTMLQSMWLLQSVACFSSLPFLL*PPEALL Trigger: TAGAAGAGCTTCAGGAGGCCATAGCAGAAAAGGAAG...TGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CAGGCCAGTTTTGCCATAGCTGAACAACTGTCTTTACTCAGTTGGCCCCAATATGCACACTCAGTGATTTaGTTTAAATCAGGGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QASFAIAEQLSLLSWPQYAHSVI*FKSGIS Trigger: ACTTATCCCTGATTTAAATCAAATCACTGAGTGTGC...ATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACTGGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR TCA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTACATCCTAGAATTAGCTaGAGCAACCTCCCAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTNEPERIYTLLAGHALHPRIS*SNLPSS Trigger: GGAGCTTGGGAGGTTGCTTCAGCTAATTCTAGGATG...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR TCA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTTCTGCTATGGCCTCCTaGAGCTCTTCTAAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICARGDKLPYLRMENLSCSAMAS*SSSKAL Trigger: AAGGGCTTTAGAAGAGCTTCAGGAGGCCATAGCAGA...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCTCACTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCGAATTCTTCTCATCCTaGAGTGTAGTCACCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QQSHCINYTRKESHPGYSEFFSS*SVVTCI Trigger: TATGCAGGTGACTACACTTCAGGATGAGAAGAATTC...GCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAGTGAGACTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | GAGGAAACTATACACACCAGACTAAGGAATTCACCTTGCACAGTTTTTCTCCACTCAGCTTGGTTTAAGTaGTCTTGCTGTGCTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EETIHTRLRNSPCTVFLHSAWFK*SCCAFE Trigger: CTCAAAAGCACAGCAAGATCACTTAAACCAAGCTGA...GTGGAGAAAAACTGTGCAAGGTGAATTCCTTAGTCTGGTGTGTATAGTTTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCTCACTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTCTTCATCTTTCTTCTaGAGAGCCGCTTCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQSHCINYTRKESHPGYSSSSFF*RAASSS Trigger: TGAACTTGAAGCGGCTCTTCAGAAGAAAGATGAAGA...GCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAGTGAGACTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTGCAGTCTTGAATGTCTaGAGCCAGATGATGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICARGDKLPYLRMENLSCAVLNV*SQMMRL Trigger: CAGCCTCATCATCTGGCTGCAGACATTCAAGACTGC...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR CCA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAAGTGTATCTGCCCTTTTaGATTCAGAGGAAAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKVYLPF*IQRKAL Trigger: CAAAGCTTTCCTCTGAATCCAAAAGGGCAGATACAC...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTAAGCTGTTTGACATCTTaGCAAGGTGAGGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: THTNEPERIYTLLAGHALSCLTS*QGEAVL Trigger: CAAGACTGCCTCACCTTGTCAAGATGTCAAACAGCT...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAAACTATACACACCAGACTAAGGAATTCACCTTGCACAGTTTTTCTCCACGATCTGCACACTCAGTaGTTTGATTTAAATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EETIHTRLRNSPCTVFLHDLHTQ*FDLNQG Trigger: TCCCTGATTTAAATCAAATCACTGAGTGTGCAGATC...GTGGAGAAAAACTGTGCAAGGTGAATTCCTTAGTCTGGTGTGTATAGTTTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | GAGGAAACTATACACACCAGACTAAGGAATTCACCTTGCACAGTTTTTCTCCACAAATCTTGTAGCTTCTaGCGATATACCTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EETIHTRLRNSPCTVFLHKSCSF*RYTSTV Trigger: AACAGTGGAGGTATATCGTCAGAAGCTACAAGATTT...GTGGAGAAAAACTGTGCAAGGTGAATTCCTTAGTCTGGTGTGTATAGTTTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATGCAGTCTTGAATGTCTaGAGCCAGATGATGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHKLYKERISPWLQLNFYAVLNV*SQMMRL Trigger: CAGCCTCATCATCTGGCTGCAGACATTCAAGACTGC...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTTCCCACCGTGTCACTTaGAGGAGAGATCACTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICARGDKLPYLRMENLSCSHRVT*RRDHYF Trigger: GAAATAGTGATCTCTCCTGCAAGTGACACGGTGGGA...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR GCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATCAGCTCTTCCTTTTCTaGTATGGCCTCCTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKLYKERISPWLQLNFYQLFLF*YGLLKL Trigger: GAGCTTCAGGAGGCCATAGCAGAAAAGGAAGAGCTG...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTAAGTTCCTGGCACCTCTaGTTCAGCTCTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THTNEPERIYTLLAGHALSSWHL*FSSSFS Trigger: AGAAAAGGAAGAGCTGAAGCAGAGGTGCCAGGAACT...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR GCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATAGTTGCTCCTGCAGCTaGTCAATGCGTTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHKLYKERISPWLQLNFYSCSCS*SMRSFS Trigger: GGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACT...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | AACACCATGCTCCAAAGCATGTGGCTATTGCAAAGTGTAGCTTGCTTTTCATCAAGTTGTAGCTGTACGTaGAAATATTTCTTTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: NTMLQSMWLLQSVACFSSSCSCT*KYFFAT Trigger: GGTTGCAAAGAAATATTTTCACGTACAGCTACAACT...TGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATGGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAAATATACCTCCACTGTTaGCTCCAGTTTATTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKIYLHC*LQFICF Trigger: AAAGCAAATAAACTGGAGTCAACAGTGGAGGTATAT...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | ATCCATTTTATGCACTCAATCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCACCAGGCAGAAACAATaGGTTTTTCCTCATAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IHFMHSIFPSIHLEKSWFTRQKQ*VFPHNP Trigger: GGGATTATGAGGAAAAACTCATTGTTTCTGCCTGGT...GAACCATGACTTCTCCAAGTGTATTGAAGGGAAGATTGAGTGCATAAAATGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGTTGATGAAGAACTTGTaGCATGGTCACTCCATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLLMKNL*HGHSIS Trigger: ACTAATGGAGTGACCATGGCACAAGTTCTTCATCAA...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTTACAGAGAACTCTTCTaGACTCAGGTTTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICARGDKLPYLRMENLSCYRELF*TQVSLS Trigger: GGACAGAGAAACCTGAGTGCAGAAGAGTTCTCTGTA...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR CCA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTACTTCCTTTTCTGCTATaGCCTCCTGAAGCTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: THTNEPERIYTLLAGHALLPFLL*PPEALL Trigger: TAGAAGAGCTTCAGGAGGCCATAGCAGAAAAGGAAG...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTTGTTTTCTATCTGGTAGTTTCTTGGGGTACAGATATTCTGAGGCACTTTCTTGTAATGACTTCTaGAGGTCCTCAATTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLCFLSGSFLGYRYSEALSCNDF*RSSICC Trigger: GCAGCAAATTGAGGACCTCCAGAAGTCATTACAAGA...AAGTGCCTCAGAATATCTGTACCCCAAGAAACTACCAGATAGAAAACAAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CCA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAAATTCTGACTTATATCTaGCTGAAGGTCTTCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKILTYI*LKVFNE Trigger: CTCATTGAAGACCTTCAGCCAGATATAAGTCAGAAT...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGGCACACTCAGTGATTTaGTTTAAATCAGGGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLAHSVI*FKSGIS Trigger: ACTTATCCCTGATTTAAATCAAATCACTGAGTGTGC...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | GAGGAAACTATACACACCAGACTAAGGAATTCACCTTGCACAGTTTTTCTCCACAAGATTTCACCTGTTTaGGGAGGTCATTTAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EETIHTRLRNSPCTVFLHKISPV*GGHLNL Trigger: AAGATTTAAATGACCTCCGCAAACAGGTGAAATCTT...GTGGAGAAAAACTGTGCAAGGTGAATTCCTTAGTCTGGTGTGTATAGTTTCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR GCA 90 bp | AACCTTTGTTTTCTATCTGGTAGTTTCTTGGGGTACAGATATTCTGAGGCACTTAGCATTTTGTTTTCATaGTGGAGTCGAATGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: NLCFLSGSFLGYRYSEALSILFS*WSRMNT Trigger: GGTGTTCATTCGACTCCAGCATGAAAACAAAATGCT...AAGTGCCTCAGAATATCTGTACCCCAAGAAACTACCAGATAGAAAACAAAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| 3UTR CAA 72 bp | CATGCTCCAAAGCATGTGGCTATTGCAAAGTGTAGCTaGCTTTTCATCAGAAACACAAATGTCAGTTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: HAPKHVAIAKCS*LFIRNTNVSLL Trigger: AAGTAAACTGACATTTGTGTTTCTGATGAAAAGCAAGCTACACTTTGCAATAGCCACATGCTTTGGAGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | AACCTTTGTTTTCTATCTGGTAGTTTCTTGGGGTACAGATATTCTGAGGCACTTTTAACCAAGATTCGCTaGACCAAGCTACATCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFLSGSFLGYRYSEALLTKIR*TKLHQF Trigger: AAATTGATGTAGCTTGGTTCAGCGAATCTTGGTTAA...AAGTGCCTCAGAATATCTGTACCCCAAGAAACTACCAGATAGAAAACAAAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR TCA 90 bp | ATAGCTGAACAACTGTCTTTACTCAGTTGGCCCCAATATTTGATCATACCAAATGATCTGCACACTCAGTaGTTTGATTTAAATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IAEQLSLLSWPQYLIIPNDLHTQ*FDLNQG Trigger: TCCCTGATTTAAATCAAATCACTGAGTGTGCAGATC...ATTTGGTATGATCAAATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCTGAACAACTGTCTTTACTCAGTTGGCCCCAATATTTGATCATACCAAATGCTTCTTTTCACAGTTaGCTGCACATCCTAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: IAEQLSLLSWPQYLIIPNASFHS*LHILEL Trigger: TAATTCTAGGATGTGCAGTCAACTGTGAAAAGAAGC...ATTTGGTATGATCAAATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR GCA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTATTGATGAAGAACTTGTaGCATGGTCACTCCATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: THTNEPERIYTLLAGHALLMKNL*HGHSIS Trigger: ACTAATGGAGTGACCATGGCACAAGTTCTTCATCAA...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR GCA 90 bp | ATCCATTTTATGCACTCAATCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCACTTCTGCTTTAATTTaGTGGAACTTTCACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHFMHSIFPSIHLEKSWFTSALI*WNFHLQ Trigger: CTGAAGGTGAAAGTTCCAGCAAATTAAAGCAGAAGT...GAACCATGACTTCTCCAAGTGTATTGAAGGGAAGATTGAGTGCATAAAATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CCA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATAAAGAGCCATCCAACTaGTCAAGCTTTTCATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHKLYKERISPWLQLNFYKEPSN*SSFSFI Trigger: GATGAATGAAAAGCTTGACCAGTTGGATGGCTCTTT...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| 3UTR CAA 72 bp | TGTATAACAAGTCATTTACATTCATTTTTACACAAATaGTCAGTACTCTGGCATAAACCACAGTCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CITSHLHSFLHK*SVLWHKPQSLP Trigger: GGGGAGTGACTGTGGTTTATGCCAGAGTACTGACAATTTGTGTAAAAATGAATGTAAATGACTTGTTATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | GCAGCTGGGACCTTAACAGAGAGGTTTCTTCGGGTGTTGGTGATGTaGCGCTGCTGCGCTAAGAAGGAACGTGCAGGAGCAGCCGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: AAGTLTERFLRVLVM*RCCAKKERAGAAAT Trigger: CGTTGCGGCTGCTCCTGCACGTTCCTTCTTAGCGCAGCAGCGGCACATCACCAACACCCGAAGAAACCTCTCTGTTAAGGTCCCAGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | GGGACCTTAACAGAGAGGTTTCTTCGGGTGTTGGTGATGTGCCGCTaGTGCGCTAAGAAGGAACGTGCAGGAGCAGCCGCAACGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTLTERFLRVLVMCR*CAKKERAGAAATLS Trigger: AGACAGCGTTGCGGCTGCTCCTGCACGTTCCTTCTTAGCGCAGCAGCGGCACATCACCAACACCCGAAGAAACCTCTCTGTTAAGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CAA 90 bp | AGCGTGCAGAGACTGCAGGAAGGACTGATCCGCTGTTCAAGGTCATCCTTGAACTGTGCCCGAGCTGCGTaGGCCTTCTTCAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVQRLQEGLIRCSRSSLNCARAA*AFFSSS Trigger: AGAAGAGCTGAAGAAGGCCAACGCAGCTCGGGCACA...GTTCAAGGATGACCTTGAACAGCGGATCAGTCCTTCCTGCAGTCTCTGCACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | TGCTCGGTTTCCAGCTCATTCATCTTGCGGTGCTTCTGCTCCAGTTaGTCCTGCAGCTGCTCAATGCGTTCATTCTCCGTCCCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSSFILRCFCSS*SCSCSMRSFSVPSC Trigger: GCAAGAAGGGACGGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGAAACCGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | GTTTCCAGCTCATTCATCTTGCGGTGCTTCTGCTCCAGTTGCTCCTaGAGCTGCTCAATGCGTTCATTCTCCGTCCCTTCTTGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSFILRCFCSSCS*SCSMRSFSVPSCCR Trigger: CCTACAGCAAGAAGGGACGGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | CTCAACCTTTGCTCGGTTTCCAGCTCATTCATCTTGCGGTGCTTCTaGTCCAGTTGCTCCTGCAGCTGCTCAATGCGTTCATTCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNLCSVSSSFILRCF*SSCSCSCSMRSFSV Trigger: GACGGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGAAACCGAGCAAAGGTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | TCTGGAGGTCCTCAATTTGCTGCTGTAGTTCTCCGATGCGCTCTTTaGTCAACCTTTGCTCGGTTTCCAGCTCATTCATCTTGCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGPQFAAVVLRCAL*STFARFPAHSSCGA Trigger: AGCACCGCAAGATGAATGAGCTGGAAACCGAGCAAAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGAGGACCTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS CCA 90 bp | CCTGAACCTGGCGCTTATAGGTCTCTAACTGTGCCCGAGCTGCGTTaGCCTTCTTCAGCTCTTCTTCCAAGCTCACAGTGTTATGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PEPGAYRSLTVPELR*PSSALLPSSQCYAY Trigger: ATATGCATAACACTGTGAGCTTGGAAGAAGAGCTGAAGAAGGCCAACGCAGCTCGGGCACAGTTAGAGACCTATAAGCGCCAGGTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | TCAATTTGCTGCTGTAGTTCTCCGATGCGCTCTTTGCTCAACCTTTaGTCGGTTTCCAGCTCATTCATCTTGCGGTGCTTCTGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SICCCSSPMRSLLNL*SVSSSFILRCFCSS Trigger: ACTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGAAACCGAGCAAAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CAA 90 bp | AGCGTGCAGAGACTGCAGGAAGGACTGATCCGCTGTTCAAGGTCATCCTTGAACATTCAGAGGAAAGCTTaGTGTGAAGGTCCTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SVQRLQEGLIRCSRSSLNIQRKA*CEGPEP Trigger: AGGTTCAGGACCTTCACACAAAGCTTTCCTCTGAAT...GTTCAAGGATGACCTTGAACAGCGGATCAGTCCTTCCTGCAGTCTCTGCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS TCA 90 bp | TGCCATGGTCACTCCATTAGTCAGCTGTTTGACATCTTGACAAGGTaGGGCAGTCTTGAATGTCTGCAGCCAGATGATGAGGCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CHGHSISQLFDILTR*GSLECLQPDDEAVT Trigger: TGTGACAGCCTCATCATCTGGCTGCAGACATTCAAGACTGCCTCACCTTGTCAAGATGTCAAACAGCTGACTAATGGAGTGACCATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
||
| CDS TCA 90 bp | CAAGCACTAGCACCACTCACCAGCCGAGACTCCATGCCCAATTTCTaGAACGCCAGGCTCTTGTTATACCAGGCAGAAACAATGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QALAPLTSRDSMPNF*NARLLLYQAETMSF Trigger: AAAACTCATTGTTTCTGCCTGGTATAACAAGAGCCTGGCGTTTCAGAAATTGGGCATGGAGTCTCGGCTGGTGAGTGGTGCTAGTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | AGTTGCTCCTGCAGCTGCTCAATGCGTTCATTCTCCGTCCCTTCTTaGTGTAGGCGAAGCATTTTGTTTTCATGCTGGAGTCGAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCSCSCSMRSFSVPS*CRRSILFSCWSRMN Trigger: GTTCATTCGACTCCAGCATGAAAACAAAATGCTTCGCCTACAGCAAGAAGGGACGGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS GCA 90 bp | GACTTAGAGCCCTGTTCTTGTAATGACTTCTGGAGGTCCTCAATTTaGTGCTGTAGTTCTCCGATGCGCTCTTTGCTCAACCTTTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DLEPCSCNDFWRSSI*CCSSPMRSLLNLCS Trigger: CGAGCAAAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGAGGACCTCCAGAAGTCATTACAAGAACAGGGCTCTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CAA 90 bp | AGCGTGCAGAGACTGCAGGAAGGACTGATCCGCTGTTCAAGGTCATCCTTGAACAGTGTATCTGCCCTTTaGGATTCAGAGGAAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVQRLQEGLIRCSRSSLNSVSAL*DSEESF Trigger: AAAGCTTTCCTCTGAATCCAAAAGGGCAGATACACT...GTTCAAGGATGACCTTGAACAGCGGATCAGTCCTTCCTGCAGTCTCTGCACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS TCA 90 bp | AGAACTTGTGCCATGGTCACTCCATTAGTCAGCTGTTTGACATCTTaGCAAGGTGAGGCAGTCTTGAATGTCTGCAGCCAGATGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTCAMVTPLVSCLTS*QGEAVLNVCSQMMR Trigger: CCTCATCATCTGGCTGCAGACATTCAAGACTGCCTCACCTTGTCAAGATGTCAAACAGCTGACTAATGGAGTGACCATGGCACAAGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
||
| CDS GCA 90 bp | TTAGAGCCCTGTTCTTGTAATGACTTCTGGAGGTCCTCAATTTGCTaGTGTAGTTCTCCGATGCGCTCTTTGCTCAACCTTTGCTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEPCSCNDFWRSSIC*CSSPMRSLLNLCSV Trigger: AACCGAGCAAAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGAGGACCTCCAGAAGTCATTACAAGAACAGGGCTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS CCA 90 bp | TTCTCCGTCCCTTCTTGCTGTAGGCGAAGCATTTTGTTTTCATGCTaGAGTCGAATGAACACCTCTCTGTATTCCACGGGCATGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVPSCCRRSILFSC*SRMNTSLYSTGMIS Trigger: TGAGATCATGCCCGTGGAATACAGAGAGGTGTTCATTCGACTCCAGCATGAAAACAAAATGCTTCGCCTACAGCAAGAAGGGACGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS CCA 90 bp | GAACTTTCACCTTCAGACTTAGAGCCCTGTTCTTGTAATGACTTCTaGAGGTCCTCAATTTGCTGCTGTAGTTCTCCGATGCGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELSPSDLEPCSCNDF*RSSICCCSSPMRSL Trigger: CAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGAGGACCTCCAGAAGTCATTACAAGAACAGGGCTCTAAGTCTGAAGGTGAAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CAA 90 bp | AGCGTGCAGAGACTGCAGGAAGGACTGATCCGCTGTTCAAGGTCATCCTTGAACTTGCAACCATTGTATTaGGATCATCAAAAGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVQRLQEGLIRCSRSSLNLQPLY*DHQKSH Trigger: ATGGCTCTTTTGATGATCCAAATACAATGGTTGCAA...GTTCAAGGATGACCTTGAACAGCGGATCAGTCCTTCCTGCAGTCTCTGCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS TCA 90 bp | TGTTCTTGCTTCTTTTCACAGTTGACTGCACATCCTAGAATTAGCTaGAGCAACCTCCCAAGCTCCACAGGATCTGCACACTCAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: CSCFFSQLTAHPRIS*SNLPSSTGSAHSVI Trigger: AATCACTGAGTGTGCAGATCCTGTGGAGCTTGGGAGGTTGCTTCAGCTAATTCTAGGATGTGCAGTCAACTGTGAAAAGAAGCAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
||
| CDS GCA 90 bp | TATTTACAGAGAACTCTTCTGCACTCAGGTTTCTCTGTCCATACCTaGATATCCAGTTCCTGGCACCTCTGCTTCAGCTCTTCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLQRTLLHSGFSVHT*ISSSWHLCFSSSFS Trigger: AGAAAAGGAAGAGCTGAAGCAGAGGTGCCAGGAACTGGATATGCAGGTATGGACAGAGAAACCTGAGTGCAGAAGAGTTCTCTGTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCTTCAATACACTTGGAGAAGTCATGGTTCTAGATCTGATTTCTACCTGCAAGGTGAGGCAGTCTaGAATGTCTGCAGCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSLQYTWRSHGSRSDFYLQGEAV*NVCSQM Trigger: CATCTGGCTGCAGACATTCAAGACTGCCTCACCTTG...CAGGTAGAAATCAGATCTAGAACCATGACTTCTCCAAGTGTATTGAAGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS CCA 90 bp | TTTCTTCAAGCCTCTTCATTTCAAATGCTAGTGTATCTGCCCTTTTaGATTCAGAGGAAAGCTTTGTGTGAAGGTCCTGAACCTGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLQASSFQMLVYLPF*IQRKALCEGPEPGA Trigger: AGCGCCAGGTTCAGGACCTTCACACAAAGCTTTCCTCTGAATCCAAAAGGGCAGATACACTAGCATTTGAAATGAAGAGGCTTGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CAA 90 bp | AGTCATGGTTCTAGATCTGATTTCTACCTGGCTGGGCAGCAGTCTCACTGCATACCAAGCTACATCAATTaGATGAAGAACTTGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHGSRSDFYLAGQQSHCIPSYIN*MKNLCH Trigger: ATGGCACAAGTTCTTCATCAAATTGATGTAGCTTGG...TATGCAGTGAGACTGCTGCCCAGCCAGGTAGAAATCAGATCTAGAACCATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
||
| CDS-3UTR CAA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAACTCTTTGCTCAACCTTaGCTCGGTTTCCAGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKLFAQP*LGFQLI Trigger: AATGAGCTGGAAACCGAGCAAAGGTTGAGCAAAGAG...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 90 bp | CCAAGATTCGCTGAACCAAGCTACATCAATTTGATGAAGAACTTGTaGCATGGTCACTCCATTAGTCAGCTGTTTGACATCTTGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRFAEPSYINLMKNL*HGHSISQLFDILTR Trigger: CCTTGTCAAGATGTCAAACAGCTGACTAATGGAGTGACCATGGCACAAGTTCTTCATCAAATTGATGTAGCTTGGTTCAGCGAATCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS-3UTR CAA 90 bp | ATATGTGCAAGAGGAGACAAACTTCCTTACTTGAGAATGGAAAACCTTTCATGTCAAGGTGAGGCAGTCTaGAATGTCTGCAGCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ICARGDKLPYLRMENLSCQGEAV*NVCSQM Trigger: CATCTGGCTGCAGACATTCAAGACTGCCTCACCTTG...ACATGAAAGGTTTTCCATTCTCAAGTAAGGAAGTTTGTCTCCTCTTGCACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| CDS-3UTR CAA 90 bp | CAGGCCAGTTTTGCCATAGCTGAACAACTGTCTTTACTCAGTTGGCCCCAATATAATTTGATGAAGAACTaGTGCCATGGTCACTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QASFAIAEQLSLLSWPQYNLMKN*CHGHSI Trigger: AATGGAGTGACCATGGCACAAGTTCTTCATCAAATT...ATATTGGGGCCAACTGAGTAAAGACAGTTGTTCAGCTATGGCAAAACTGGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| CDS-3UTR CAA 90 bp | AGTCATGGTTCTAGATCTGATTTCTACCTGGCTGGGCAGCAGTCTCACTGCATAAACTTCTGCTTTAATTaGCTGGAACTTTCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHGSRSDFYLAGQQSHCINFCFN*LELSPS Trigger: TGAAGGTGAAAGTTCCAGCAAATTAAAGCAGAAGTT...TATGCAGTGAGACTGCTGCCCAGCCAGGTAGAAATCAGATCTAGAACCATGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | GCAGAAATGAACCGAATGCCACAAATACAGCTCCAGACACTCCTTAGAGGCAAGAAGTTCACTGATCTTTaGGGCATTCTGACTTATATC | + |
|
Preference number: 5 (lower is better) Translates to: AEMNRMPQIQLQTLLRGKKFTDL*GILTYI Trigger: GATATAAGTCAGAATGCCCAAAAGATCAGTGAACTT...CTTGCCTCTAAGGAGTGTCTGGAGCTGTATTTGTGGCATTCGGTTCATTTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | TCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCAATTTGATGAAGAACTaGTGCCATGGTCACTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SVLIHSSTCSNWHTTQRSNLMKN*CHGHSI Trigger: AATGGAGTGACCATGGCACAAGTTCTTCATCAAATT...GCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAACACGGTAATCATCTTTaGCAGCTTCAAGCCTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKHGNHL*QLQAYS Trigger: ACTATAGGCTTGAAGCTGCAAAAGATGATTACCGTG...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAATGCTTCTTTTCACAGTaGACTGCACATCCTAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKCFFSQ*TAHPRI Trigger: AATTCTAGGATGTGCAGTCAACTGTGAAAAGAAGCA...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAATGTATCTCTCCTCCATaGCTTTCATGTCTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKCISPP*LSCLHL Trigger: AAGATGAAGACATGAAAGCAATGGAGGAGAGATACA...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | CTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAGAAGCTGCAAACTGAAATTCAATCAGTaGCTTTTCAAGTTCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LIHSSTCSNWHTTQRSCKLKFNQ*LFKFLT Trigger: TGTGAGGAACTTGAAAAGCAACTGATTGAATTTCAG...TTTGCAGCTTCTCTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | AATAGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGGATATACCTCCACTGTaGACTCCAGTTTATTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSSVLIHSSTCSNWHTTQDIPPL*TPVYLL Trigger: AAGCAAATAAACTGGAGTCAACAGTGGAGGTATATC...CTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 90 bp | AAAGATTTCACCTGTTTGCGGAGGTCATTTAAATCTTGTAGCTTCTaGCGATATACCTCCACTGTTGACTCCAGTTTATTTGCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KDFTCLRRSFKSCSF*RYTSTVDSSLFALS Trigger: AGACAAAGCAAATAAACTGGAGTCAACAGTGGAGGTATATCGTCAGAAGCTACAAGATTTAAATGACCTCCGCAAACAGGTGAAATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 90 bp | CCAATTTCTGAAACGCCAGGCTCTTGTTATACCAGGCAGAAACAATaGGTTTTTCCTCATAATCCCTCAATTTTGCTACTTTACATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PISETPGSCYTRQKQ*VFPHNPSILLLYIH Trigger: GTGAATGTAAAGTAGCAAAATTGAGGGATTATGAGGAAAAACTCATTGTTTCTGCCTGGTATAACAAGAGCCTGGCGTTTCAGAAATTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | AATAGTTCAGTCCTCATTCACAGCAGTACATGTTCAAACTGGCATACAACTCAGAAAGATTTCACCTGTTaGCGGAGGTCATTTAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NSSVLIHSSTCSNWHTTQKDFTC*RRSFKS Trigger: AGATTTAAATGACCTCCGCAAACAGGTGAAATCTTT...CTGAGTTGTATGCCAGTTTGAACATGTACTGCTGTGAATGAGGACTGAACTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS-3UTR CAA 90 bp | ACACATACAAATGAACCAGAGAGAATATACACTCTATTAGCAGGTCACGCATTATGCTTCTTTTCACAGTaGACTGCACATCCTAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: THTNEPERIYTLLAGHALCFFSQ*TAHPRI Trigger: AATTCTAGGATGTGCAGTCAACTGTGAAAAGAAGCA...TAATGCGTGACCTGCTAATAGAGTGTATATTCTCTCTGGTTCATTTGTATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| CDS-3UTR CAA 90 bp | CTGCATAAATTATACAAGGAAAGAATCTCACCCTGGTTACAGCTGAATTTCTATTCCAGTTTATTTGCTTaGTCTGACGTAGCCCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHKLYKERISPWLQLNFYSSLFA*SDVALR Trigger: TCTTAGGGCTACGTCAGACAAAGCAAATAAACTGGA...ATAGAAATTCAGCTGTAACCAGGGTGAGATTCTTTCCTTGTATAATTTATGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 90 bp | TATGCATATACATCATATTTGTCTCCTGTAAAGATTTCACCTGTTTaGGGAGGTCATTTAAATCTTGTAGCTTCTGACGATATACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YAYTSYLSPVKISPV*GGHLNLVASDDIPP Trigger: TGGAGGTATATCGTCAGAAGCTACAAGATTTAAATGACCTCCGCAAACAGGTGAAATCTTTACAGGAGACAAATATGATGTATATGCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 90 bp | TGCTGCGCTAAGAAGGAACGTGCAGGAGCAGCCGCAACGCTGTCTTaGCAAGCACTAGCACCACTCACCAGCCGAGACTCCATGCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: CCAKKERAGAAATLS*QALAPLTSRDSMPN Trigger: ATTGGGCATGGAGTCTCGGCTGGTGAGTGGTGCTAGTGCTTGCAAAGACAGCGTTGCGGCTGCTCCTGCACGTTCCTTCTTAGCGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | ACAGAGAGGTTTCTTCGGGTGTTGGTGATGTGCCGCTaGTGCGCTAAGAAGGAACGTGCAGGAGCAGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TERFLRVLVMCR*CAKKERAGAAA Trigger: TGCGGCTGCTCCTGCACGTTCCTTCTTAGCGCAGCAGCGGCACATCACCAACACCCGAAGAAACCTCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 90 bp | TCAGATGCTGCAGCTGGGACCTTAACAGAGAGGTTTCTTCGGGTGTaGGTGATGTGCCGCTGCTGCGCTAAGAAGGAACGTGCAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SDAAAGTLTERFLRV*VMCRCCAKKERAGA Trigger: TGCTCCTGCACGTTCCTTCTTAGCGCAGCAGCGGCACATCACCAACACCCGAAGAAACCTCTCTGTTAAGGTCCCAGCTGCAGCATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | TCCAGCTCATTCATCTTGCGGTGCTTCTGCTCCAGTTaGTCCTGCAGCTGCTCAATGCGTTCATTCTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFILRCFCSS*SCSCSMRSFSV Trigger: GACGGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | ACCTTAACAGAGAGGTTTCTTCGGGTGTTGGTGATGTaGCGCTGCTGCGCTAAGAAGGAACGTGCAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLTERFLRVLVM*RCCAKKERAGA Trigger: TGCTCCTGCACGTTCCTTCTTAGCGCAGCAGCGGCACATCACCAACACCCGAAGAAACCTCTCTGTTAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | TCATTCATCTTGCGGTGCTTCTGCTCCAGTTGCTCCTaGAGCTGCTCAATGCGTTCATTCTCCGTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFILRCFCSSCS*SCSMRSFSVPS Trigger: AGAAGGGACGGAGAATGAACGCATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | AACCTTTGCTCGGTTTCCAGCTCATTCATCTTGCGGTaGTTCTGCTCCAGTTGCTCCTGCAGCTGCTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: NLCSVSSSFILR*FCSSCSCSCSM Trigger: CATTGAGCAGCTGCAGGAGCAACTGGAGCAGAAGCACCGCAAGATGAATGAGCTGGAAACCGAGCAAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | TGCTGTAGTTCTCCGATGCGCTCTTTGCTCAACCTTTaGTCGGTTTCCAGCTCATTCATCTTGCGGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CCSSPMRSLLNL*SVSSSFILRCF Trigger: GAAGCACCGCAAGATGAATGAGCTGGAAACCGAGCAAAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 72 bp | GCCATGGTCACTCCATTAGTCAGCTGTTTGACATCTTaGCAAGGTGAGGCAGTCTTGAATGTCTGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AMVTPLVSCLTS*QGEAVLNVCSQ Trigger: CTGGCTGCAGACATTCAAGACTGCCTCACCTTGTCAAGATGTCAAACAGCTGACTAATGGAGTGACCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS GCA 72 bp | AGAACTCTTCTGCACTCAGGTTTCTCTGTCCATACCTaGATATCCAGTTCCTGGCACCTCTGCTTCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RTLLHSGFSVHT*ISSSWHLCFSS Trigger: AGAGCTGAAGCAGAGGTGCCAGGAACTGGATATGCAGGTATGGACAGAGAAACCTGAGTGCAGAAGAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107083.2 |
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| CDS GCA 72 bp | TGCAGCTGCTCAATGCGTTCATTCTCCGTCCCTTCTTaGTGTAGGCGAAGCATTTTGTTTTCATGCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: CSCSMRSFSVPS*CRRSILFSCWS Trigger: ACTCCAGCATGAAAACAAAATGCTTCGCCTACAGCAAGAAGGGACGGAGAATGAACGCATTGAGCAGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | CCCTGTTCTTGTAATGACTTCTGGAGGTCCTCAATTTaGTGCTGTAGTTCTCCGATGCGCTCTTTGCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PCSCNDFWRSSI*CCSSPMRSLLN Trigger: GTTGAGCAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGAGGACCTCCAGAAGTCATTACAAGAACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CCA 72 bp | CCTTCTTGCTGTAGGCGAAGCATTTTGTTTTCATGCTaGAGTCGAATGAACACCTCTCTGTATTCCACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSCCRRSILFSC*SRMNTSLYSTG Trigger: GCCCGTGGAATACAGAGAGGTGTTCATTCGACTCCAGCATGAAAACAAAATGCTTCGCCTACAGCAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 72 bp | ATGCATCAGCTTGGTTTAAGTGATCTTGCTGTGCTTTaGAGCACCGCAGCTCCTCATTCGTCTCCTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: MHQLGLSDLAVL*STAAPHSSPSE Trigger: CTCTGAAGGAGACGAATGAGGAGCTGCGGTGCTCAAAAGCACAGCAAGATCACTTAAACCAAGCTGATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 90 bp | TCAATGCGTTCATTCTCCGTCCCTTCTTGCTGTAGGCGAAGCATTTaGTTTTCATGCTGGAGTCGAATGAACACCTCTCTGTATTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SMRSFSVPSCCRRSI*FSCWSRMNTSLYST Trigger: CGTGGAATACAGAGAGGTGTTCATTCGACTCCAGCATGAAAACAAAATGCTTCGCCTACAGCAAGAAGGGACGGAGAATGAACGCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 72 bp | TTCTTTTCACAGTTGACTGCACATCCTAGAATTAGCTaGAGCAACCTCCCAAGCTCCACAGGATCTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: FFSQLTAHPRIS*SNLPSSTGSAH Trigger: GTGTGCAGATCCTGTGGAGCTTGGGAGGTTGCTTCAGCTAATTCTAGGATGTGCAGTCAACTGTGAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS CAA 72 bp | TCATTCTCCGTCCCTTCTTGCTGTAGGCGAAGCATTTaGTTTTCATGCTGGAGTCGAATGAACACCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SFSVPSCCRRSI*FSCWSRMNTSL Trigger: CAGAGAGGTGTTCATTCGACTCCAGCATGAAAACAAAATGCTTCGCCTACAGCAAGAAGGGACGGAGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS GCA 72 bp | TGTTCTTGTAATGACTTCTGGAGGTCCTCAATTTGCTaGTGTAGTTCTCCGATGCGCTCTTTGCTCAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSCNDFWRSSIC*CSSPMRSLLNL Trigger: AAGGTTGAGCAAAGAGCGCATCGGAGAACTACAGCAGCAAATTGAGGACCTCCAGAAGTCATTACAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 72 bp | CTCTCCTCCATTGCTTTCATGTCTTCATCTTTCTTCTaGAGAGCCGCTTCAAGTTCACTGATCTTTTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSIAFMSSSFF*RAASSSLIFWA Trigger: TGCCCAAAAGATCAGTGAACTTGAAGCGGCTCTTCAGAAGAAAGATGAAGACATGAAAGCAATGGAGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 90 bp | AGCAAGGCTCGTCAGCTCATCATTCCTGTGCTGAAATTCAATCAGTaGCTTTTCAAGTTCCTCACAGTGAACACGGTAATCATCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SKARQLIIPVLKFNQ*LFKFLTVNTVIIFC Trigger: GCAAAAGATGATTACCGTGTTCACTGTGAGGAACTTGAAAAGCAACTGATTGAATTTCAGCACAGGAATGATGAGCTGACGAGCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 72 bp | CTCCCAAGCTCCACAGGATCTGCACACTCAGTGATTTaGTTTAAATCAGGGATAAGTTCTTCAGAAATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPSSTGSAHSVI*FKSGISSSEIC Trigger: GCAGATTTCTGAAGAACTTATCCCTGATTTAAATCAAATCACTGAGTGTGCAGATCCTGTGGAGCTTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS GCA 72 bp | GCTGAACCAAGCTACATCAATTTGATGAAGAACTTGTaGCATGGTCACTCCATTAGTCAGCTGTTTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: AEPSYINLMKNL*HGHSISQLFDI Trigger: GATGTCAAACAGCTGACTAATGGAGTGACCATGGCACAAGTTCTTCATCAAATTGATGTAGCTTGGTTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS CCA 72 bp | GCCTCTTCATTTCAAATGCTAGTGTATCTGCCCTTTTaGATTCAGAGGAAAGCTTTGTGTGAAGGTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASSFQMLVYLPF*IQRKALCEGPE Trigger: TTCAGGACCTTCACACAAAGCTTTCCTCTGAATCCAAAAGGGCAGATACACTAGCATTTGAAATGAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 72 bp | TTCGCTGAACCAAGCTACATCAATTTGATGAAGAACTaGTGCCATGGTCACTCCATTAGTCAGCTGTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FAEPSYINLMKN*CHGHSISQLFD Trigger: GTCAAACAGCTGACTAATGGAGTGACCATGGCACAAGTTCTTCATCAAATTGATGTAGCTTGGTTCAGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS CAA 90 bp | ATTCCATGGAGGACCTTCTTCAGGTTACTAGCCTTTATTCTCCAGTaGTCTCCAACATCATCTTTAATTCGGCTTAACCAAGATTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IPWRTFFRLLAFILQ*SPTSSLIRLNQDSL Trigger: CAGCGAATCTTGGTTAAGCCGAATTAAAGATGATGTTGGAGACAACTGGAGAATAAAGGCTAGTAACCTGAAGAAGGTCCTCCATGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030306.14 ENSMUST00000107083.2 |
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| CDS TCA 72 bp | CTTCATCTTTCTTCTGAAGAGCCGCTTCAAGTTCACTaGTCTTTTGGGCATTCTGACTTATATCTGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LHLSSEEPLQVH*SFGHSDLYLAE Trigger: TTCAGCCAGATATAAGTCAGAATGCCCAAAAGATCAGTGAACTTGAAGCGGCTCTTCAGAAGAAAGATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 72 bp | CGATATACCTCCACTGTTGACTCCAGTTTATTTGCTTaGTCTGACGTAGCCCTAAGAACATCTATCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RYTSTVDSSLFA*SDVALRTSISS Trigger: AGATGAGATAGATGTTCTTAGGGCTACGTCAGACAAAGCAAATAAACTGGAGTCAACAGTGGAGGTATATCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 72 bp | ACCTGTTTGCGGAGGTCATTTAAATCTTGTAGCTTCTaGCGATATACCTCCACTGTTGACTCCAGTTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: TCLRRSFKSCSF*RYTSTVDSSLF Trigger: AAATAAACTGGAGTCAACAGTGGAGGTATATCGTCAGAAGCTACAAGATTTAAATGACCTCCGCAAACAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS TCA 72 bp | GAAACGCCAGGCTCTTGTTATACCAGGCAGAAACAATaGGTTTTTCCTCATAATCCCTCAATTTTGCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ETPGSCYTRQKQ*VFPHNPSILLL Trigger: AAGTAGCAAAATTGAGGGATTATGAGGAAAAACTCATTGTTTCTGCCTGGTATAACAAGAGCCTGGCGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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| CDS CAA 72 bp | TTTCAAGTTCCTCACAGTGAACACGGTAATCATCTTTaGCAGCTTCAAGCCTATAGTTTTCTTCTTGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: FQVPHSEHGNHL*QLQAYSFLLVI Trigger: AATTACAAGAAGAAAACTATAGGCTTGAAGCTGCAAAAGATGATTACCGTGTTCACTGTGAGGAACTTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030306.14 |
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