Pregenerated sensors for HMGCLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007908Ensembl transcript IDs: ENSMUST00000008052.13, ENSMUST00000117981.3, ENSMUST00000183425.8, ENSMUST00000183979.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTTGCCACCGCCGCCACCACTGCCGCCTGTCAGTGCCCTAGTCTaGAAGAGAGATGAGCAGGGAGCTAGGACTAAGGCAGATCCACAG | + |
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Preference number: 1 (lower is better) Translates to: LLPPPPPLPPVSALV*KRDEQGARTKADPQ Trigger: CTGTGGATCTGCCTTAGTCCTAGCTCCCTGCTCATCTCTCTTTCAGACTAGGGCACTGACAGGCGGCAGTGGTGGCGGCGGTGGCAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR TCA 90 bp | CACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTTaGACAGACGCCTTGTCTTGCCCCATCCACTTCACGGTCTATCCA | + |
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Preference number: 1 (lower is better) Translates to: HHQKGKQWGSFSACS*TDALSCPIHFTVYP Trigger: TGGATAGACCGTGAAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR TCA 90 bp | AGTTGGATGACACTTTGCTGCCTCTGTGTCATCCATATTCCAACCTaGGCCCCCAAGCACAGAACTGCTTTCAGTACTCTAGAAGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: SWMTLCCLCVIHIPT*APKHRTAFSTLEEK Trigger: CTTTTCTTCTAGAGTACTGAAAGCAGTTCTGTGCTTGGGGGCTCAGGTTGGAATATGGATGACACAGAGGCAGCAAAGTGTCATCCAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR CCA 90 bp | TGTAAAACACAGCAAACTGGATGCACAGAACAAACATGGGAGGTATaGTGTGTTTTCAGGATGTGGCTTCTTGCCATTGACCACAGCATC | + |
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Preference number: 1 (lower is better) Translates to: CKTQQTGCTEQTWEV*CVFRMWLLAIDHSI Trigger: GATGCTGTGGTCAATGGCAAGAAGCCACATCCTGAAAACACACCATACCTCCCATGTTTGTTCTGTGCATCCAGTTTGCTGTGTTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR TCA 90 bp | ACAAGTAGTCTGCATAAACACATGTTCTCACAAATATCTCAAAACTaGGCACTCCAGGTCTCTGAGAGGGAAAAATCAACTTCCTCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: TSSLHKHMFSQISQN*ALQVSEREKSTSSE Trigger: TTCTGAGGAAGTTGATTTTTCCCTCTCAGAGACCTGGAGTGCTCAGTTTTGAGATATTTGTGAGAACATGTGTTTATGCAGACTACTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR CAA 90 bp | CCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTaGAACAGACGCCTTGTCTTGCCCCATCCACTTCACGGTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: PPPEGQAVGLILSLQ*NRRLVLPHPLHGLS Trigger: GGATAGACCGTGAAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAACAGACGCCTTGTCTTaGCCCATCCACTTCACGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QALSTTRRASSGAHSQLATDALS*PIHFTV Trigger: GACCGTGAAGTGGATGGGGCAAGACAAGGCGTCTGT...TGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR CAA 90 bp | GCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTaGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AVGLILSLQLNRRLV*PHPLHGLSKHSSSP Trigger: GGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGGAAGAAGTGCACTTTTGCCACCGCCGCCACCACTGCCGCCTGTCAGTGTACCCTGCGGTAAGGTaGCTTGAGGAGGCATTAACA | + |
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Preference number: 2 (lower is better) Translates to: MKEEVHFCHRRHHCRLSVYPAVR*LEEALT Trigger: TGTTAATGCCTCCTCAAGCCACCTTACCGCAGGGTA...CACTGACAGGCGGCAGTGGTGGCGGCGGTGGCAAAAGTGCACTTCTTCCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGGGGCTGGAAGGGCTCTaGTCTTTCTTAAATCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLCPPPEGQAVGLILSLQGLEGL*SFLNHK Trigger: TTTGTGATTTAAGAAAGAGCAGAGCCCTTCCAGCCC...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR-3UTR GCA 90 bp | AAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGGGCTGGAAGGGCTCTaGTCTTTCTTAAATCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: KRAGFVHHQKGKQWGSFSGLEGL*SFLNHK Trigger: TTTGTGATTTAAGAAAGAGCAGAGCCCTTCCAGCCC...TGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTTGGATGACACTTTGCTGCCTCTGTGTCATCCATATTCCAACCTGAGCCAAACATGGGAGGTATaGTGTGTTTTCAGGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PQLDDTLLPLCHPYSNLSQTWEV*CVFRMW Trigger: CCACATCCTGAAAACACACCATACCTCCCATGTTTG...GCTCAGGTTGGAATATGGATGACACAGAGGCAGCAAAGTGTCATCCAACTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTCTAAAAGAACAGTCAATGCTCTTAACCACTGAGCCATATCCCAGGCCTGGGCTGGAAGGGCTCTaGTCTTTCTTAAATCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: CPLKEQSMLLTTEPYPRPGLEGL*SFLNHK Trigger: TTTGTGATTTAAGAAAGAGCAGAGCCCTTCCAGCCC...AGGCCTGGGATATGGCTCAGTGGTTAAGAGCATTGACTGTTCTTTTAGAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR CAA 90 bp | CAGAACAAACATGGGAGGTATGGTGTGTTTTCAGGATGTGGCTTCTaGCCATTGACCACAGCATCTTGGAGCACAATAAAGTCATTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QNKHGRYGVFSGCGF*PLTTASWSTIKSLK Trigger: TTTCAATGACTTTATTGTGCTCCAAGATGCTGTGGTCAATGGCAAGAAGCCACATCCTGAAAACACACCATACCTCCCATGTTTGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR-3UTR GCA 90 bp | AATTATTTCTGCTTGTTGGTTTGTTGGGCTGAGGGATCAAACACAGGTTCTTACGGGCTGGAAGGGCTCTaGTCTTTCTTAAATCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: NYFCLLVCWAEGSNTGSYGLEGL*SFLNHK Trigger: TTTGTGATTTAAGAAAGAGCAGAGCCCTTCCAGCCC...GTAAGAACCTGTGTTTGATCCCTCAGCCCAACAAACCAACAAGCAGAAATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGGATGCTGGAACAAAACCTACAGAAGAAAGGTTACAAGCTGACAAGTTGCACCATACAGGTGCTTaGAATCAAATCTATGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EKDAGTKPTEERLQADKLHHTGA*NQIYVL Trigger: GAGGACATAGATTTGATTCCAAGCACCTGTATGGTG...CAACTTGTCAGCTTGTAACCTTTCTTCTGTAGGTTTTGTTCCAGCATCCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR GCA 72 bp | CAACTTCCTCAGAAAATGAAGGAAGAAGTGCACTTTTaGCACCGCCGCCACCACTGCCGCCTGTCAGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLPQKMKEEVHF*HRRHHCRLSVP Trigger: GGGCACTGACAGGCGGCAGTGGTGGCGGCGGTGGCAAAAGTGCACTTCTTCCTTCATTTTCTGAGGAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR TCA 72 bp | AAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTTaGACAGACGCCTTGTCTTGCCCCATCCACTTCACG | + |
|
Preference number: 3 (lower is better) Translates to: KGKQWGSFSACS*TDALSCPIHFT Trigger: CGTGAAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| 3UTR TCA 72 bp | ACACTTTGCTGCCTCTGTGTCATCCATATTCCAACCTaGGCCCCCAAGCACAGAACTGCTTTCAGTACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TLCCLCVIHIPT*APKHRTAFSTL Trigger: TAGAGTACTGAAAGCAGTTCTGTGCTTGGGGGCTCAGGTTGGAATATGGATGACACAGAGGCAGCAAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR CCA 72 bp | GAACAAACATGGGAGGTATGGTGTGTTTTCAGGATGTaGCTTCTTGCCATTGACCACAGCATCTTGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EQTWEVWCVFRM*LLAIDHSILEH Trigger: GTGCTCCAAGATGCTGTGGTCAATGGCAAGAAGCCACATCCTGAAAACACACCATACCTCCCATGTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR GCA 72 bp | CATCCATATTCCAACCTGAGCCCCCAAGCACAGAACTaGTTTCAGTACTCTAGAAGAAAAGGATGCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HPYSNLSPQAQN*FQYSRRKGCWN Trigger: GTTCCAGCATCCTTTTCTTCTAGAGTACTGAAAGCAGTTCTGTGCTTGGGGGCTCAGGTTGGAATATGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR CCA 72 bp | CAGCAAACTGGATGCACAGAACAAACATGGGAGGTATaGTGTGTTTTCAGGATGTGGCTTCTTGCCATTGAC | + |
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Preference number: 3 (lower is better) Translates to: QQTGCTEQTWEV*CVFRMWLLAID Trigger: GTCAATGGCAAGAAGCCACATCCTGAAAACACACCATACCTCCCATGTTTGTTCTGTGCATCCAGTTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTCTAAAAGAACAGTCAATGCTCTTAACCACTGAGCCATATCCCAGGCCTCACAGTAGTATTTCCTaGGGCCATTTAAAAGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CPLKEQSMLLTTEPYPRPHSSIS*GHLKVN Trigger: GTTTACTTTTAAATGGCCCAAGGAAATACTACTGTG...AGGCCTGGGATATGGCTCAGTGGTTAAGAGCATTGACTGTTCTTTTAGAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR GCA 72 bp | GCACAGAACTGCTTTCAGTACTCTAGAAGAAAAGGATaGTGGAACAAAACCTACAGAAGAAAGGTTACAAGC | + |
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Preference number: 3 (lower is better) Translates to: AQNCFQYSRRKG*WNKTYRRKVTS Trigger: GCTTGTAACCTTTCTTCTGTAGGTTTTGTTCCAGCATCCTTTTCTTCTAGAGTACTGAAAGCAGTTCTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR TCA 72 bp | TGCTGGAACAAAACCTACAGAAGAAAGGTTACAAGCTaGCAAGTTGGAGTCTTCCATGGAAATTTAGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: CWNKTYRRKVTS*QVGVFHGNLGF Trigger: GAAACCTAAATTTCCATGGAAGACTCCAACTTGTCAGCTTGTAACCTTTCTTCTGTAGGTTTTGTTCCAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR TCA 72 bp | CTGCATAAACACATGTTCTCACAAATATCTCAAAACTaGGCACTCCAGGTCTCTGAGAGGGAAAAATCAACT | + |
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Preference number: 3 (lower is better) Translates to: LHKHMFSQISQN*ALQVSEREKST Trigger: AGTTGATTTTTCCCTCTCAGAGACCTGGAGTGCTCAGTTTTGAGATATTTGTGAGAACATGTGTTTATGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR TCA 72 bp | ATGTCCTCTAAAAGAACAGTCAATGCTCTTAACCACTaGGCCATATCCCAGGCCTTGATCTTTAATGTATTA | + |
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Preference number: 3 (lower is better) Translates to: MSSKRTVNALNH*AISQALIFNVL Trigger: TAATACATTAAAGATCAAGGCCTGGGATATGGCTCAGTGGTTAAGAGCATTGACTGTTCTTTTAGAGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR GCA 72 bp | CTACAATTGATTAAATGTAAAACACAGCAAACTGGATaGACAGAACAAACATGGGAGGTATGGTGTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: LQLIKCKTQQTG*TEQTWEVWCVF Trigger: GAAAACACACCATACCTCCCATGTTTGTTCTGTGCATCCAGTTTGCTGTGTTTTACATTTAATCAATTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR CCA 72 bp | AAGAAAGGTTACAAGCTGACAAGTTGGAGTCTTCCATaGAAATTTAGGTTTCTTTGTCAACTCGTATGTTTC | + |
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Preference number: 3 (lower is better) Translates to: KKGYKLTSWSLP*KFRFLCQLVCF Trigger: GAAACATACGAGTTGACAAAGAAACCTAAATTTCCATGGAAGACTCCAACTTGTCAGCTTGTAACCTTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| 3UTR GCA 72 bp | ACTGGATTTACAAATACTATTGAATCACCATACAGGTaGTTGGAATCAAATCTATGTCCTCTAAAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: TGFTNTIESPYR*LESNLCPLKEQ Trigger: CTGTTCTTTTAGAGGACATAGATTTGATTCCAAGCACCTGTATGGTGATTCAATAGTATTTGTAAATCCAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCCAGCGCCCCTGCCACTaGGTCTCCGCTCCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: AGFVHHQKGKQWGSFSACQRPCH*VSAPEM Trigger: CATCTCTGGAGCGGAGACTCAGTGGCAGGGGCGCTG...GCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATGAAGCTGCTGGTAGTTaGGGCAGTGCTTCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AVGLILSLQLNRRLVLPHEAAGS*GSASQQ Trigger: CTGCTGCGAAGCACTGCCTCAACTACCAGCAGCTTC...ATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR TCA 90 bp | GGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCACTGAAGCTGCTGGTAGTTaGGGCAGTGCTTCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GAHSQLAVEQTPCLAPSTEAAGS*GSASQQ Trigger: CTGCTGCGAAGCACTGCCTCAACTACCAGCAGCTTC...AGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR TCA 90 bp | AAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGAAGCTGCTGGTAGTTaGGGCAGTGCTTCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KRAGFVHHQKGKQWGSFSEAAGS*GSASQQ Trigger: CTGCTGCGAAGCACTGCCTCAACTACCAGCAGCTTC...TGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR CCA 90 bp | AGAGCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATCACGTACCCTCGCACTaGGATGTCCATGTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RANEQALSTTRRASSGAHHVPSH*DVHVSC Trigger: GCAAGACACATGGACATCCCAGTGCGAGGGTACGTG...ATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
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| CDS-3UTR CCA 90 bp | CGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTAAACTGCTATCTCCGTaGCTCCAGCAGCAACCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RAGFVHHQKGKQWGSFSAKLLSP*LQQQPV Trigger: CACAGGTTGCTGCTGGAGCCACGGAGATAGCAGTTT...AGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117981.3 |
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| 3UTR CAA 72 bp | CCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTaGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: PPEGQAVGLILS*QLNRRLVLPHP Trigger: TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR TCA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGATTCAAGGCGAGCGTTaGAGGAGGCTTGTGCGACTT | + |
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Preference number: 4 (lower is better) Translates to: RLCPPPEGQAVGLILSLQIQGER*RRLVRL Trigger: AAGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAAT...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR CCA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCGCATCACTTCAGCATaGTCAGCCATCTGTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: ANEQALSTTRRASSGAHSRITSA*SAICGT Trigger: GGTACCACAGATGGCTGACCATGCTGAAGTGATGCG...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
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| CDS-3UTR CCA 90 bp | GCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAAACTGCTATCTCCGTaGCTCCAGCAGCAACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: AGFVHHQKGKQWGSFSACKLLSP*LQQQQH Trigger: ATGCTGTTGCTGCTGGAGCCACGGAGATAGCAGTTT...GCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
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| CDS-3UTR CCA 90 bp | GCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCACGTACCCTCGCACTaGGATGTCCATGTGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGAHSQLAVEQTPCLAHVPSH*DVHVSC Trigger: GCAAGACACATGGACATCCCAGTGCGAGGGTACGTG...GGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
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| CDS-3UTR CCA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTTCCAGCAGCAACCTGTaGTACCCATCTGGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ANEQALSTTRRASSGAHSSSSNL*YPSGRH Trigger: GTGTCTTCCAGATGGGTACCACAGGTTGCTGCTGGA...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117981.3 |
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| 3UTR CAA 72 bp | TCAACTTCCTCAGAAAATGAAGGAAGAAGTGCACTTTaGCCACCGCCGCCACCACTGCCGCCTGTCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: STSSENEGRSAL*PPPPPLPPVSA Trigger: GGCACTGACAGGCGGCAGTGGTGGCGGCGGTGGCAAAAGTGCACTTCTTCCTTCATTTTCTGAGGAAGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTGAAGCTGCTGGTAGTTaGGGCAGTGCTTCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPHPLHGLSKHSSSPSSFEAAGS*GSASQQ Trigger: CTGCTGCGAAGCACTGCCTCAACTACCAGCAGCTTC...AAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS-3UTR TCA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTATGTGTCATGGCAATaGACAGCAAGAGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLCPPPEGQAVGLILSLQYVSWQ*TARAPG Trigger: TCCAGGGGCTCTTGCTGTTCATTGCCATGACACATA...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATATTCAAGGCGAGCGTTaGAGGAGGCTTGTGCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: AVGLILSLQLNRRLVLPHIQGER*RRLVRL Trigger: AAGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAAT...ATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTATGGTCAGCCATCTGTaGTACCCATCTGGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ANEQALSTTRRASSGAHSMVSHL*YPSGRH Trigger: GTGTCTTCCAGATGGGTACCACAGATGGCTGACCAT...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGCCAACATCATCTTCATaGTGCCTGGAGTACCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RLCPPPEGQAVGLILSLQPTSSS*CLEYQL Trigger: GAGTTGGTACTCCAGGCAGCATGAAGATGATGTTGG...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATCATCTTCATGCTGCCTaGAGTACCAACTCCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: RANEQALSTTRRASSGAHHLHAA*STNSNR Trigger: ACGATTGGAGTTGGTACTCCAGGCAGCATGAAGATG...ATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCATCTTCATGCTGCCTaGAGTACCAACTCCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ANEQALSTTRRASSGAHSHLHAA*STNSNR Trigger: ACGATTGGAGTTGGTACTCCAGGCAGCATGAAGATG...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR TCA 90 bp | CGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTCTTGCTAAAAGATTCTaGAGCAGCACCAAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGFVHHQKGKQWGSFSALAKRF*SSTKNC Trigger: GCAGTTTTTGGTGCTGCTTCAGAATCTTTTAGCAAG...AGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCGAGCTGATGACCTCCTaGAACCTTCCCATACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGAHSQLAVEQTPCLAELMTS*NLPILS Trigger: AGAAAGTATGGGAAGGTTTCAGGAGGTCATCAGCTC...GGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
||
| CDS-3UTR TCA 90 bp | TGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTTATTCAAGGCGAGCGTTaGAGGAGGCTTGTGCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: CPIHFTVYPSIAPLPALFIQGER*RRLVRL Trigger: AAGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAAT...AAAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | CGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTGTTGAAGGAGGCTTGTaGGACTTTAGAGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGFVHHQKGKQWGSFSAVEGGL*DFRVCS Trigger: ACTACAAACTCTAAAGTCGCACAAGCCTCCTTCAAC...AGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCCTGCAATCCATCCCTTaGTCCAACTTCGACTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGFVHHQKGKQWGSFSACLQSIP*SNFDYF Trigger: AAAATAGTCGAAGTTGGACCAAGGGATGGATTGCAG...GCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCACATCTTCATGCTGCCTaGAGTACCAACTCCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLILSLQLNRRLVLPHPHLHAA*STNSNR Trigger: ACGATTGGAGTTGGTACTCCAGGCAGCATGAAGATG...TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGCTTGCTAAAAGATTCTaGAGCAGCACCAAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLCPPPEGQAVGLILSLQLAKRF*SSTKNC Trigger: GCAGTTTTTGGTGCTGCTTCAGAATCTTTTAGCAAG...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTTATGTGTCATGGCAATaGACAGCAAGAGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPHPLHGLSKHSSSPSSFYVSWQ*TARAPG Trigger: TCCAGGGGCTCTTGCTGTTCATTGCCATGACACATA...AAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTGTTGAAGGAGGCTTGTaGGACTTTAGAGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANEQALSTTRRASSGAHSVEGGL*DFRVCS Trigger: ACTACAAACTCTAAAGTCGCACAAGCCTCCTTCAAC...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCAATTAATCCCCATCTGTaGTACCCATCTGGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLILSLQLNRRLVLPHPINPHL*YPSGRH Trigger: GTGTCTTCCAGATGGGTACCACAGATGGGGATTAAT...TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183425.8 |
||
| 3UTR CAA 72 bp | CTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTaGCCCCATCCACTTCACGGTCTATCCAAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LILSLQLNRRLV*PHPLHGLSKHS Trigger: GCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR TCA 90 bp | CGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTACATTAATCCCCATCTaGAGAGCTGTTAGGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGFVHHQKGKQWGSFSATLIPI*RAVRIF Trigger: AAATATCCTAACAGCTCTTCAGATGGGGATTAATGT...AGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGGCCACACACTCTGCATTGTGTCGAGGCTCATAAACCACTAACAATGTGTATTCAAGGCGAGCGTTaGAGGAGGCTTGTGCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPHTLHCVEAHKPLTMCIQGER*RRLVRL Trigger: AAGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAAT...ACACATTGTTAGTGGTTTATGAGCCTCGACACAATGCAGAGTGTGTGGCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATATAACCTTTTCATTCTaGAATCCATCCCTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RANEQALSTTRRASSGAHITFSF*NPSLGP Trigger: TGGACCAAGGGATGGATTGCAGAATGAAAAGGTTAT...ATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAATAACCTTTTCATTCTaGAATCCATCCCTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QALSTTRRASSGAHSQLAITFSF*NPSLGP Trigger: TGGACCAAGGGATGGATTGCAGAATGAAAAGGTTAT...TGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCACTGCAATCCATCCCTTaGTCCAACTTCGACTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGAHSQLAVEQTPCLAPLQSIP*SNFDYF Trigger: AAAATAGTCGAAGTTGGACCAAGGGATGGATTGCAG...TGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | AAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCACTGCAATCCATCCCTTaGTCCAACTTCGACTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRAGFVHHQKGKQWGSFSLQSIP*SNFDYF Trigger: AAAATAGTCGAAGTTGGACCAAGGGATGGATTGCAG...TGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| 3UTR CAA 72 bp | GATGAGCAGGGAGCTAGGACTAAGGCAGATCCACAGTaGGATGACACTTTGCTGCCTCTGTGTCATCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: DEQGARTKADPQ*DDTLLPLCHPY Trigger: ATATGGATGACACAGAGGCAGCAAAGTGTCATCCAACTGTGGATCTGCCTTAGTCCTAGCTCCCTGCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGTTGGATGACACTTTGCTGCCTCTGTGTCATCCATATTCCAACCTGAGCGAGCTGATGACCTCCTaGAACCTTCCCATACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLDDTLLPLCHPYSNLSELMTS*NLPILS Trigger: AGAAAGTATGGGAAGGTTTCAGGAGGTCATCAGCTC...GCTCAGGTTGGAATATGGATGACACAGAGGCAGCAAAGTGTCATCCAACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| CDS-3UTR TCA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTACATTAATCCCCATCTaGAGAGCTGTTAGGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: ANEQALSTTRRASSGAHSTLIPI*RAVRIF Trigger: AAATATCCTAACAGCTCTTCAGATGGGGATTAATGT...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCACTATAACCTTTTCATTCTaGAATCCATCCCTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAHSQLAVEQTPCLAPSTITFSF*NPSLGP Trigger: TGGACCAAGGGATGGATTGCAGAATGAAAAGGTTAT...AGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTGTAGTTTTGTTCACTaGCTTGCAAATAAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RLCPPPEGQAVGLILSLQCSFVH*LANKLT Trigger: GGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACA...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATACCATACAATCTCTTTaGAACTTCTGTGACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGLILSLQLNRRLVLPHTIQSL*NFCDFL Trigger: CAGAAAGTCACAGAAGTTTCAAAGAGATTGTATGGT...ATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
||
| CDS-3UTR TCA 90 bp | GTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCAACCATACAATCTCTTTaGAACTTCTGTGACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLILSLQLNRRLVLPHPTIQSL*NFCDFL Trigger: CAGAAAGTCACAGAAGTTTCAAAGAGATTGTATGGT...TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCACATTAATCCCCATCTaGAGAGCTGTTAGGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGAHSQLAVEQTPCLATLIPI*RAVRIF Trigger: AAATATCCTAACAGCTCTTCAGATGGGGATTAATGT...GGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCATGTAGTTTTGTTCACTaGCTTGCAAATAAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGLILSLQLNRRLVLPHPCSFVH*LANKLT Trigger: GGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACA...TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTGTTGAAGGAGGCTTGTaGGACTTTAGAGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPHPLHGLSKHSSSPSSFVEGGL*DFRVCS Trigger: ACTACAAACTCTAAAGTCGCACAAGCCTCCTTCAAC...AAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | AAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCATGGAAGACACAAAGCTaGTTACTTCTATTACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KRAGFVHHQKGKQWGSFSWKTQS*LLLLQT Trigger: TGTCTGTAATAGAAGTAACCAGCTTTGTGTCTTCCA...TGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCTAAAAGAACAGTCAATGCTCTTAACCACTGAGCCATATCCCAGGCCTAGGATAGCGAACTCCTaGATACTGACGAATGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CPLKEQSMLLTTEPYPRPRIANS*ILTNAS Trigger: CGAGGCATTCGTCAGTATCCAGGAGTTCGCTATCCT...AGGCCTGGGATATGGCTCAGTGGTTAAGAGCATTGACTGTTCTTTTAGAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| CDS-3UTR GCA 90 bp | TTGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTATAACCTTTTCATTCTaGAATCCATCCCTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHPLHGLSKHSSSPSSFITFSF*NPSLGP Trigger: TGGACCAAGGGATGGATTGCAGAATGAAAAGGTTAT...AAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| 3UTR CAA 72 bp | AATATAATGATTTCTGTAAGAGCAAACGAGCAGGCTTaGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NIMISVRANEQA*STTRRASSGAH Trigger: ATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGCTCTTACAGAAATCATTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CCA 90 bp | AGGTATGGTGTGTTTTCAGGATGTGGCTTCTTGCCATTGACCACAGCATCTTGGCTGCAATCCATCCCTTaGTCCAACTTCGACTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYGVFSGCGFLPLTTASWLQSIP*SNFDYF Trigger: AAAATAGTCGAAGTTGGACCAAGGGATGGATTGCAG...CCAAGATGCTGTGGTCAATGGCAAGAAGCCACATCCTGAAAACACACCATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGGATGCTGGAACAAAACCTACAGAAGAAAGGTTACAAGCTGACAAGTTGTATGTGTCATGGCAATaGACAGCAAGAGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKDAGTKPTEERLQADKLYVSWQ*TARAPG Trigger: TCCAGGGGCTCTTGCTGTTCATTGCCATGACACATA...CAACTTGTCAGCTTGTAACCTTTCTTCTGTAGGTTTTGTTCCAGCATCCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| 3UTR CAA 72 bp | AGGTATGGTGTGTTTTCAGGATGTGGCTTCTTGCCATaGACCACAGCATCTTGGAGCACAATAAAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RYGVFSGCGFLP*TTASWSTIKSL Trigger: CAATGACTTTATTGTGCTCCAAGATGCTGTGGTCAATGGCAAGAAGCCACATCCTGAAAACACACCATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| 3UTR CAA 72 bp | TTCAGGATGTGGCTTCTTGCCATTGACCACAGCATCTaGGAGCACAATAAAGTCATTGAAATAGTTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRMWLLAIDHSI*EHNKVIEIVNR Trigger: TCTGTTAACTATTTCAATGACTTTATTGTGCTCCAAGATGCTGTGGTCAATGGCAAGAAGCCACATCCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR GCA 90 bp | AAACTTTGGCTCTTGGTCCACAACTTAACAAACTTGGCAAATGGAGAGTTAGGATGTAGTTTTGTTCACTaGCTTGCAAATAAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLWLLVHNLTNLANGELGCSFVH*LANKLT Trigger: GGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACA...TCCTAACTCTCCATTTGCCAAGTTTGTTAAGTTGTGGACCAAGAGCCAAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR GCA 90 bp | AATTATTTCTGCTTGTTGGTTTGTTGGGCTGAGGGATCAAACACAGGTTCTTACTGTAGTTTTGTTCACTaGCTTGCAAATAAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NYFCLLVCWAEGSNTGSYCSFVH*LANKLT Trigger: GGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACA...GTAAGAACCTGTGTTTGATCCCTCAGCCCAACAAACCAACAAGCAGAAATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| 3UTR CAA 72 bp | TCTGAGGTTTCTATTTGCACTGTCTTTGAAAGAACTTaGAGCTTCATTTCAAGACAAAAATGCTGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSICTVFERT*SFISRQKCWSL Trigger: CAGTGACCAGCATTTTTGTCTTGAAATGAAGCTCAAAGTTCTTTCAAAGACAGTGCAAATAGAAACCTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| 3UTR CAA 72 bp | GGATTTACAAATACTATTGAATCACCATACAGGTGCTaGGAATCAAATCTATGTCCTCTAAAAGAACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFTNTIESPYRC*ESNLCPLKEQS Trigger: TGACTGTTCTTTTAGAGGACATAGATTTGATTCCAAGCACCTGTATGGTGATTCAATAGTATTTGTAAATCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCCATTCAAGGCGAGCGTaGAAGGAGGCTTGTGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: AGFVHHQKGKQWGSFSACHSRRA*KEACAT Trigger: AGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAATG...GCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCTCCCAGAAGCACCTTTaGCATAAGGGCAGCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGFVHHQKGKQWGSFSACSQKHL*HKGSHL Trigger: TAGGTGGCTGCCCTTATGCAAAAGGTGCTTCTGGGA...GCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGCATTCAAGGCGAGCGTaGAAGGAGGCTTGTGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: RLCPPPEGQAVGLILSLQHSRRA*KEACAT Trigger: AGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAATG...CTGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCACATTCAAGGCGAGCGTaGAAGGAGGCTTGTGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: QALSTTRRASSGAHSQLAHSRRA*KEACAT Trigger: AGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAATG...TGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCATCCCAGAAGCACCTTTaGCATAAGGGCAGCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: QALSTTRRASSGAHSQLASQKHL*HKGSHL Trigger: TAGGTGGCTGCCCTTATGCAAAAGGTGCTTCTGGGA...TGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAAGATCCACACCTGTATaGAGCCCCATGCCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QALSTTRRASSGAHSQLARSTPV*SPMPLS Trigger: GCTCAATGGCATGGGGCTCAATACAGGTGTGGATCT...TGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCTCCCAGAAGCACCTTTaGCATAAGGGCAGCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: ASSGAHSQLAVEQTPCLASQKHL*HKGSHL Trigger: TAGGTGGCTGCCCTTATGCAAAAGGTGCTTCTGGGA...GGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | AAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAAGATCCACACCTGTATaGAGCCCCATGCCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRAGFVHHQKGKQWGSFSRSTPV*SPMPLS Trigger: GCTCAATGGCATGGGGCTCAATACAGGTGTGGATCT...TGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCAAGATCCACACCTGTATaGAGCCCCATGCCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGLILSLQLNRRLVLPHPRSTPV*SPMPLS Trigger: GCTCAATGGCATGGGGCTCAATACAGGTGTGGATCT...TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCAGCGTTGAAGGAGGCTaGTGCGACTTTAGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGFVHHQKGKQWGSFSACSVEGG*CDFRVC Trigger: ACAAACTCTAAAGTCGCACAAGCCTCCTTCAACGCT...GCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGGAAGAAGTGCACTTTTGCCACCGCCGCCACCACTGCCGCCTGTCAGTGAGCGTTGAAGGAGGCTaGTGCGACTTTAGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: MKEEVHFCHRRHHCRLSVSVEGG*CDFRVC Trigger: ACAAACTCTAAAGTCGCACAAGCCTCCTTCAACGCT...CACTGACAGGCGGCAGTGGTGGCGGCGGTGGCAAAAGTGCACTTCTTCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTTCATTCAAGGCGAGCGTaGAAGGAGGCTTGTGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: CPIHFTVYPSIAPLPALFHSRRA*KEACAT Trigger: AGTCGCACAAGCCTCCTTCAACGCTCGCCTTGAATG...AAAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGCTTGCATCTGCAATCCATCCCTaGGTCCAACTTCGACTATTT | + |
|
Preference number: 5 (lower is better) Translates to: QALSTTRRASSGAHSQLASAIHP*VQLRLF Trigger: AAATAGTCGAAGTTGGACCAAGGGATGGATTGCAGA...TGCAAGCTGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCACTAGCGTTGAAGGAGGCTaGTGCGACTTTAGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GAHSQLAVEQTPCLAPSTSVEGG*CDFRVC Trigger: ACAAACTCTAAAGTCGCACAAGCCTCCTTCAACGCT...AGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GCAAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTTTGAGCCCCATGCCATaGAGCATATATATCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ANEQALSTTRRASSGAHSLSPMP*SIYIKS Trigger: GGATTTGATATATATGCTCAATGGCATGGGGCTCAA...AGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCATACAGACAAGCCAGTTaGGGAAAGTTGATTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLILSLQLNRRLVLPHPYRQAS*GKLIDE Trigger: CTCATCAATCAACTTTCCCAAACTGGCTTGTCTGTA...TGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATTACAGACAAGCCAGTTaGGGAAAGTTGATTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVGLILSLQLNRRLVLPHYRQAS*GKLIDE Trigger: CTCATCAATCAACTTTCCCAAACTGGCTTGTCTGTA...ATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | AAACGAGCAGGCTTTGTCCACCACCAGAAGGGCAAGCAGTGGGGCTCATTCTCAGTTTTGTTCACTGCCTaGCAAATAAACTCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRAGFVHHQKGKQWGSFSVLFTA*QINSPA Trigger: AGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAAC...TGAGAATGAGCCCCACTGCTTGCCCTTCTGGTGGTGGACAAAGCCTGCTCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTAGCGTTGAAGGAGGCTaGTGCGACTTTAGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPHPLHGLSKHSSSPSSFSVEGG*CDFRVC Trigger: ACAAACTCTAAAGTCGCACAAGCCTCCTTCAACGCT...AAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGGGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATACCATACAATCTCTTaGAAACCTGTGGTACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSGAHSQLAVEQTPCLAPYHTIS*KPVVPI Trigger: GATGGGTACCACAGGTTTCAAAGAGATTGTATGGTA...TGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCCCACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183979.8 |
||
| CDS CCA 90 bp | CTGAAAACCCTGAAGATTAGGTGTAAGGACAGGATAGCGAACTCCTaGATACTGACGAATGCCTCGCATCACTTCAGCATGGTCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKTLKIRCKDRIANS*ILTNASHHFSMVSH Trigger: ATGGCTGACCATGCTGAAGTGATGCGAGGCATTCGTCAGTATCCAGGAGTTCGCTATCCTGTCCTTACACCTAATCTTCAGGGTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| CDS-3UTR CAA 90 bp | TGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTTTCTGCAATCCATCCCTaGGTCCAACTTCGACTATTT | + |
|
Preference number: 5 (lower is better) Translates to: CPIHFTVYPSIAPLPALFSAIHP*VQLRLF Trigger: AAATAGTCGAAGTTGGACCAAGGGATGGATTGCAGA...AAAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCACTTGTTTTGTTCACTGCCTaGCAAATAAACTCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLILSLQLNRRLVLPHPLVLFTA*QINSPA Trigger: AGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAAC...AAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCCCATCCACTTCACGGTCTATCCAAGCATAGCTCCTCTCCCAGCTCTTTTTTGAGCCCCATGCCATaGAGCATATATATCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LPHPLHGLSKHSSSPSSFLSPMP*SIYIKS Trigger: GGATTTGATATATATGCTCAATGGCATGGGGCTCAA...AAAAGAGCTGGGAGAGGAGCTATGCTTGGATAGACCGTGAAGTGGATGGGGCAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCATTCTCAGCTTGCAGTTGAACAGACGCCTTGTCTTGCCCCATCCACTTGCCAGTTTGGGAAAGTaGATTGATGAGTTCAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLILSLQLNRRLVLPHPLASLGK*IDEFNF Trigger: AAAATTGAACTCATCAATCAACTTTCCCAAACTGGC...AAGTGGATGGGGCAAGACAAGGCGTCTGTTCAACTGCAAGCTGAGAATGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGTTGGATGACACTTTGCTGCCTCTGTGTCATCCATATTCCAACCTGAGCTTGAGCCCCATGCCATaGAGCATATATATCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PQLDDTLLPLCHPYSNLSLSPMP*SIYIKS Trigger: GGATTTGATATATATGCTCAATGGCATGGGGCTCAA...GCTCAGGTTGGAATATGGATGACACAGAGGCAGCAAAGTGTCATCCAACTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCTCTAAAAGAACAGTCAATGCTCTTAACCACTGAGCCATATCCCAGGCCTTCTGCAATCCATCCCTaGGTCCAACTTCGACTATTT | + |
|
Preference number: 5 (lower is better) Translates to: CPLKEQSMLLTTEPYPRPSAIHP*VQLRLF Trigger: AAATAGTCGAAGTTGGACCAAGGGATGGATTGCAGA...AGGCCTGGGATATGGCTCAGTGGTTAAGAGCATTGACTGTTCTTTTAGAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS GCA 90 bp | GTTGAAGGAGGCTTGTGCGACTTTAGAGTTTGTAGTTTTGTTCACTaGCTTGCAAATAAACTCACCAGCTTCCATCACCTTGTAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VEGGLCDFRVCSFVH*LANKLTSFHHLVEI Trigger: GATCTCTACAAGGTGATGGAAGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACAAACTCTAAAGTCGCACAAGCCTCCTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS CCA 90 bp | AGGGATTTCTTTCATGACACTTTCCAACATCATCTTCATGCTGCCTaGAGTACCAACTCCAATCGTGTCGCCCAAAGATATTTCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDFFHDTFQHHLHAA*STNSNRVAQRYFIA Trigger: TGCTATGAAATATCTTTGGGCGACACGATTGGAGTTGGTACTCCAGGCAGCATGAAGATGATGTTGGAAAGTGTCATGAAAGAAATCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183979.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCCACACACTCTGCATTGTGTCGAGGCTCATAAACCACTAACAATGTGTGCCAGTTTGGGAAAGTaGATTGATGAGTTCAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPHTLHCVEAHKPLTMCASLGK*IDEFNF Trigger: AAAATTGAACTCATCAATCAACTTTCCCAAACTGGC...ACACATTGTTAGTGGTTTATGAGCCTCGACACAATGCAGAGTGTGTGGCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGATGCTGGAACAAAACCTACAGAAGAAAGGTTACAAGCTGACAAGTTGTACAGACAAGCCAGTTaGGGAAAGTTGATTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: EKDAGTKPTEERLQADKLYRQAS*GKLIDE Trigger: CTCATCAATCAACTTTCCCAAACTGGCTTGTCTGTA...CAACTTGTCAGCTTGTAACCTTTCTTCTGTAGGTTTTGTTCCAGCATCCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS-3UTR CAA 90 bp | AATTATTTCTGCTTGTTGGTTTGTTGGGCTGAGGGATCAAACACAGGTTCTTACGTTTTGTTCACTGCCTaGCAAATAAACTCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NYFCLLVCWAEGSNTGSYVLFTA*QINSPA Trigger: AGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAAC...GTAAGAACCTGTGTTTGATCCCTCAGCCCAACAAACCAACAAGCAGAAATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000183425.8 |
||
| CDS TCA 72 bp | AGATGCTTCCTGCGCCGCATCCAGCGCCCCTGCCACTaGGTCTCCGCTCCAGAGATGTTCGCGGAGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RCFLRRIQRPCH*VSAPEMFAEKL Trigger: CAGCTTCTCCGCGAACATCTCTGGAGCGGAGACTCAGTGGCAGGGGCGCTGGATGCGGCGCAGGAAGCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS CCA 72 bp | TGGGCAGCCCAGGGCGCAGGACACGTACCCTCGCACTaGGATGTCCATGTGTCTTGCAGAGCTGATGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: WAAQGAGHVPSH*DVHVSCRADDL Trigger: GAGGTCATCAGCTCTGCAAGACACATGGACATCCCAGTGCGAGGGTACGTGTCCTGCGCCCTGGGCTGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
||
| CDS TCA 72 bp | CGCTCCAGAGATGTTCGCGGAGAAGCTGCTGGTAGTTaGGGCAGTGCTTCGCAGCAGATGGTAGATTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRDVRGEAAGS*GSASQQMVDSP Trigger: TGGGGAATCTACCATCTGCTGCGAAGCACTGCCTCAACTACCAGCAGCTTCTCCGCGAACATCTCTGGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS CCA 72 bp | AATGCCTCGCATCACTTCAGCATGGTCAGCCATCTGTaGTACCCATCTGGAAGACACAAAGCTGGTTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: NASHHFSMVSHL*YPSGRHKAGYF Trigger: GAAGTAACCAGCTTTGTGTCTTCCAGATGGGTACCACAGATGGCTGACCATGCTGAAGTGATGCGAGGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| CDS CAA 72 bp | TCAAATCCTCAGTGGCTACATTCCCAGAAGCACCTTTaGCATAAGGGCAGCCACCTAATCCGGATACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SNPQWLHSQKHL*HKGSHLIRIQQ Trigger: CTGCTGTATCCGGATTAGGTGGCTGCCCTTATGCAAAAGGTGCTTCTGGGAATGTAGCCACTGAGGATTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
||
| CDS CCA 72 bp | CTGAAGATTAGGTGTAAGGACAGGATAGCGAACTCCTaGATACTGACGAATGCCTCGCATCACTTCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LKIRCKDRIANS*ILTNASHHFSM Trigger: CATGCTGAAGTGATGCGAGGCATTCGTCAGTATCCAGGAGTTCGCTATCCTGTCCTTACACCTAATCTTCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008052.13 |
||
| CDS CAA 90 bp | GCATATATATCAAATCCTCAGTGGCTACATTCCCAGAAGCACCTTTaGCATAAGGGCAGCCACCTAATCCGGATACAGCAGAATCCACCA | + |
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Preference number: 6 (lower is better) Translates to: AYISNPQWLHSQKHL*HKGSHLIRIQQNPP Trigger: TGGTGGATTCTGCTGTATCCGGATTAGGTGGCTGCCCTTATGCAAAAGGTGCTTCTGGGAATGTAGCCACTGAGGATTTGATATATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS CAA 90 bp | AGGCGAGCGTTGAAGGAGGCTTGTGCGACTTTAGAGTTTGTAGTTTaGTTCACTGCCTTGCAAATAAACTCACCAGCTTCCATCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RRALKEACATLEFVV*FTALQINSPASITL Trigger: CAAGGTGATGGAAGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACAAACTCTAAAGTCGCACAAGCCTCCTTCAACGCTCGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS GCA 72 bp | GGCTTGTGCGACTTTAGAGTTTGTAGTTTTGTTCACTaGCTTGCAAATAAACTCACCAGCTTCCATCACCTT | + |
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Preference number: 6 (lower is better) Translates to: GLCDFRVCSFVH*LANKLTSFHHL Trigger: AAGGTGATGGAAGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACAAACTCTAAAGTCGCACAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS CAA 72 bp | TTGAAGGAGGCTTGTGCGACTTTAGAGTTTGTAGTTTaGTTCACTGCCTTGCAAATAAACTCACCAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LKEACATLEFVV*FTALQINSPAS Trigger: GGAAGCTGGTGAGTTTATTTGCAAGGCAGTGAACAAAACTACAAACTCTAAAGTCGCACAAGCCTCCTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS TCA 72 bp | AATGGAGCAGTTAATATTCTTCTTGCTAAAAGATTCTaGAGCAGCACCAAAAACTGCTATCTCCGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NGAVNILLAKRF*SSTKNCYLRGS Trigger: GGAGCCACGGAGATAGCAGTTTTTGGTGCTGCTTCAGAATCTTTTAGCAAGAAGAATATTAACTGCTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 |
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| CDS CAA 90 bp | CACAAAGCTGGTTACTTCTATTACAGACAAGCCAGTTTGGGAAAGTaGATTGATGAGTTCAATTTTTATGTCTGTGGGAACTATAACCTT | + |
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Preference number: 6 (lower is better) Translates to: HKAGYFYYRQASLGK*IDEFNFYVCGNYNL Trigger: AAGGTTATAGTTCCCACAGACATAAAAATTGAACTCATCAATCAACTTTCCCAAACTGGCTTGTCTGTAATAGAAGTAACCAGCTTTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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| CDS CAA 72 bp | CACAAAGCTGGTTACTTCTATTACAGACAAGCCAGTTaGGGAAAGTTGATTGATGAGTTCAATTTTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: HKAGYFYYRQAS*GKLIDEFNFYV Trigger: GACATAAAAATTGAACTCATCAATCAACTTTCCCAAACTGGCTTGTCTGTAATAGAAGTAACCAGCTTTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000008052.13 ENSMUST00000117981.3 ENSMUST00000183425.8 ENSMUST00000183979.8 |
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