Pregenerated sensors for HKDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020080Ensembl transcript IDs: ENSMUST00000020277.9
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAGCGCCCTGAGTGGGTGAGATTCCTCCTGGCTCCAGGGCAGTaGGCTCCTCCACACTCAGAGATGCAGGGGCCAATGCCCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TERPEWVRFLLAPGQ*APPHSEMQGPMPWL Trigger: AAGCCAGGGCATTGGCCCCTGCATCTCTGAGTGTGGAGGAGCCCACTGCCCTGGAGCCAGGAGGAATCTCACCCACTCAGGGCGCTCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR GCA 90 bp | CAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATaGTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: QMEVPPSVTAKQAPG*LEYGERKVSQEVVW Trigger: CCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR GCA 90 bp | CTCCAGGGCAGTGGGCTCCTCCACACTCAGAGATGCAGGGGCCAATaGCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LQGSGLLHTQRCRGQ*PGFPGAYKVNMTSE Trigger: CTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCATCTCTGAGTGTGGAGGAGCCCACTGCCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR TCA 90 bp | GTCCTTGAAAGAAATGCAGAAAACAGCGACACCTACTGTGTCACATaGATGATAAACAGTACCTGGGATGGTGTCCCGCCCCATGATACA | + |
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Preference number: 1 (lower is better) Translates to: VLERNAENSDTYCVT*MINSTWDGVPPHDT Trigger: TGTATCATGGGGCGGGACACCATCCCAGGTACTGTTTATCATTCATGTGACACAGTAGGTGTCGCTGTTTTCTGCATTTCTTTCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTCGCTCACAGCTCAAGTaGCTTGCCAAAAGGGGGATC | + |
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Preference number: 2 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSRSQLK*LAKRGI Trigger: GATCCCCCTTTTGGCAAGTCACTTGAGCTGTGAGCG...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCTATGCCAAATGGAGGTaGCACCCAGTGTCACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAYAKWR*HPVSLP Trigger: TGGCAGTGACACTGGGTGGCACCTCCATTTGGCATA...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR-3UTR CCA 90 bp | CCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGAGCCAGGAGGTCGTCTaGTGGTCCCTGGTCATCACC | + |
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Preference number: 2 (lower is better) Translates to: PSLAKICQMEVPPSVTAKSQEVV*WSLVIT Trigger: GGTGATGACCAGGGACCACCAGACGACCTCCTGGCT...CTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTACAGCTCAAGTGACTTaGCAAAAGGGGGATCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSTAQVT*QKGDLW Trigger: CCAAAGATCCCCCTTTTGGCAAGTCACTTGAGCTGT...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTTCTTTGGCTAAAATATaGCAAATGGAGGTGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSSLAKI*QMEVPP Trigger: GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGA...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR CCA 72 bp | GGGGTGACACCCCAGATGCTCACAGAGCGCCCTGAGTaGGTGAGATTCCTCCTGGCTCCAGGGCAGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GVTPQMLTERPE*VRFLLAPGQWA Trigger: AGCCCACTGCCCTGGAGCCAGGAGGAATCTCACCCACTCAGGGCGCTCTGTGAGCATCTGGGGTGTCACCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR CCA 72 bp | CCTGAGTGGGTGAGATTCCTCCTGGCTCCAGGGCAGTaGGCTCCTCCACACTCAGAGATGCAGGGGCCAATG | + |
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Preference number: 3 (lower is better) Translates to: PEWVRFLLAPGQ*APPHSEMQGPM Trigger: CATTGGCCCCTGCATCTCTGAGTGTGGAGGAGCCCACTGCCCTGGAGCCAGGAGGAATCTCACCCACTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR GCA 72 bp | GTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATaGTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: VPPSVTAKQAPG*LEYGERKVSQE Trigger: CTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR GCA 72 bp | AGTGGGCTCCTCCACACTCAGAGATGCAGGGGCCAATaGCCTGGCTTCCCTGGTGCCTATAAAGTCAACATG | + |
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Preference number: 3 (lower is better) Translates to: SGLLHTQRCRGQ*PGFPGAYKVNM Trigger: CATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCATCTCTGAGTGTGGAGGAGCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR GCA 72 bp | TCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTaGCACCCAGTGTCACTGCCAAGCAAGCACCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: SAHLWLKYAKWR*HPVSLPSKHQD Trigger: ATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR TCA 72 bp | AGAAATGCAGAAAACAGCGACACCTACTGTGTCACATaGATGATAAACAGTACCTGGGATGGTGTCCCGCCC | + |
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Preference number: 3 (lower is better) Translates to: RNAENSDTYCVT*MINSTWDGVPP Trigger: GGGCGGGACACCATCCCAGGTACTGTTTATCATTCATGTGACACAGTAGGTGTCGCTGTTTTCTGCATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR-3UTR CAA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACCCAGATCCTTTGATTTaGAAAGTCAGCCCATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: WTIFVYLTVLERNAENSDPDPLI*KVSPSL Trigger: CAAAGATGGGCTGACTTTCAAAATCAAAGGATCTGG...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR TCA 72 bp | TTATTCATGGACAATATTTGTATACCTAACAGTCCTTaGAAGAAATGCAGAAAACAGCGACACCTACTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LFMDNICIPNSP*KKCRKQRHLLC Trigger: ACACAGTAGGTGTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCATGAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | TGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGGGAGCCCCTGCCGGGTaGGGTCGATCAGGATCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CLEYGERKVSQEVVWWSLGAPAG*GRSGSA Trigger: GGCGGATCCTGATCGACCTCACCCGGCAGGGGCTCC...CAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | ACACCCCAGATGCTCACAGAGCGCCCTGAGTGGGTGAGATTCCTCCTGGCTCCAGGTCCGGAGTCGCTCTaGAATCTGCCCTCGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TPQMLTERPEWVRFLLAPGPESL*NLPSEE Trigger: CTCTTCCGAGGGCAGATTTCAGAGCGACTCCGGACC...TGGAGCCAGGAGGAATCTCACCCACTCAGGGCGCTCTGTGAGCATCTGGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGGTCATCACAGCTGTGATCAGAGCTaGTCCCTTCCCGCTGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: VRREEGEPGGRLVVPGHHSCDQS*SLPAAV Trigger: GACGGCAGCGGGAAGGGAGCAGCTCTGATCACAGCT...GTGATGACCAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | GGGCTCCTCCACACTCAGAGATGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTGCTCTCGGGTCAACTaGAACAAAGCCAGCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLLHTQRCRGQCPGFPGACSRVN*NKASTL Trigger: CAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCA...GGCACCAGGGAAGCCAGGGCATTGGCCCCTGCATCTCTGAGTGTGGAGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | ACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGCAGCTGGGCGCCCTTaGGGCCCATGTAGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TQCHCQASTRMLRVRREEAAGRP*GPCSPG Trigger: TCCTGGACTACATGGGCCTCAAGGGCGCCCAGCTGC...TTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | GTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGGTCATCACCCATGTACAGCCCGCTaGTCATCTTCTCGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: VRREEGEPGGRLVVPGHHPCTAR*SSSRTA Trigger: AGCTGTTCGAGAAGATGATCAGCGGGCTGTACATGG...GTGATGACCAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGACGTCCAGGTCCTTGTaGTTCTTCATGGCAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLEYGERKVSQEVVWWSLTSRSL*FFMAVA Trigger: GGCCACTGCCATGAAGAAGCACAAGGACCTGGACGT...CAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCCCATGGCGGCCCCCTTaGTGCTTCCACTCTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAPWRPP*CFHSLT Trigger: TGTCAGAGAGTGGAAGCACCAAGGGGGCCGCCATGG...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | AATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTATCGATCTGCTTGCGCTaGGCCTGTACCCGAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NGGATQCHCQASTRMLRVSICLR*ACTREA Trigger: GGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGA...TACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCGGTGCTTCCACTCTCTaGCAGGAGGAAGCGGACATC | + |
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Preference number: 4 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAGASTL*QEEADI Trigger: GATGTCCGCTTCCTCCTGTCAGAGAGTGGAAGCACC...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | TATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTCACAGTCGGTGGCCTTaGAGCCTTTGGTCCACCCTA | + |
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Preference number: 4 (lower is better) Translates to: YAKWRCHPVSLPSKHQDAHSRWP*SLWSTL Trigger: TAGGGTGGACCAAAGGCTTCAAGGCCACCGACTGTG...AGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGCCCTCTTGGGAGACTTaGACCTTCAAGACCCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: CLEYGERKVSQEVVWWSLPSWET*TFKTRN Trigger: GTTTCGGGTCTTGAAGGTGCAAGTCTCCCAAGAGGG...CAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTTGGCGGCCCCCTTGGTaGTTCCACTCTCTGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSWRPPW*FHSLTG Trigger: TCCTGTCAGAGAGTGGAAGCACCAAGGGGGCCGCCA...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCAGCACCTTGTCGATCTaGTTGCGCTGGGCCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: GQCPGFPGAYKVNMTSEASTLSI*LRWACT Trigger: GGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCT...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGGTCATCACCCGGCTGGGCCATGTGTCGTTCACGATTaGAACAATGTCCAGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EGEPGGRLVVPGHHPAGPCVVHD*NNVQVK Trigger: TTTGACCTGGACATTGTTGCAATCGTGAACGACACA...TGGCCCAGCCGGGTGATGACCAGGGACCACCAGACGACCTCCTGGCTCACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGCCTTGTCATACTGGGTaGGGATGTCATCGATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLEYGERKVSQEVVWWSLPCHTG*GCHRCS Trigger: GCTGCATCGATGACATCCGCACCCAGTATGACAAGG...CAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAGCGGACATCACAGTTTaGGACCAGTCTCCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: GATQCHCQASTRMLRVRRADITV*DQSPHH Trigger: GTGGTGAGGAGACTGGTCCCAAACTGTGATGTCCGC...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | CCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCCACTGCGGTCACCATaGCGGCCCCCTTGGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSLAKICQMEVPPSVTAKPLRSP*RPPWCF Trigger: GAAGCACCAAGGGGGCCGCCATGGTGACCGCAGTGG...CTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | GCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTTGCGCAGAGATTGGCTaGGCGAAAAGAGACGATGGT | + |
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Preference number: 4 (lower is better) Translates to: ASTRMLRVRREEGEPGGRCAEIG*AKRDDG Trigger: ACCATCGTCTCTTTTCGCTCAGCCAATCTCTGCGCA...ACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTGAGAGCAGAGGATTTTaGACCCCCAAACAGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: ASTRMLRVRREEGEPGGRESRGF*TPKQET Trigger: GGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTC...ACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTTACCCGAGAGGCCACTaGGGTCACCATGGCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LKVSPSLAKICQMEVPPSYPRGH*GHHGGP Trigger: GGGGCCGCCATGGTGACCGCAGTGGCCTCTCGGGTA...ACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCCTTGTCGATCTGCTTaGGCTGGGCCTGTACCCGAG | + |
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Preference number: 4 (lower is better) Translates to: WLKYAKWRCHPVSLPSKHPCRSA*AGPVPE Trigger: CTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGG...GTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTCGCACACCCAGGAGTTaGTCTCGGGTCAACTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSRTPRS*SRVNWN Trigger: GTTCCAGTTGACCCGAGAGCAACTCCTGGGTGTGCG...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTTCCTCCCCAGTGCCCTaGATGATCTCCAGAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSSSPVP*MISRGM Trigger: CATCCCTCTGGAGATCATGCAGGGCACTGGGGAGGA...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | AATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTAAGTCGCTCTGAAATCTaGCCTCGGAAGAGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NGGATQCHCQASTRMLRVSRSEI*PRKRSP Trigger: GGGGCTCCTCTTCCGAGGGCAGATTTCAGAGCGACT...TACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGACCTCCTTCAGCTTGGTaGAGTAAAACGCCACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GATQCHCQASTRMLRVRRPPSAW*SKTPPS Trigger: ACTTGGTGGCGTTTTACTTCACCAAGCTGAAGGAGG...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCAATGTCACATCACACTaGGGGGCCAGCTCTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: GQCPGFPGAYKVNMTSEANVTSH*GASSFT Trigger: GGTGAAAGAGCTGGCCCCTCAGTGTGATGTGACATT...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCGAAAAGAGACGATGGTaGACACGTGCTGGACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAEKRRW*TRAGQR Trigger: TCGCTGTCCAGCACGTGTGCACCATCGTCTCTTTTC...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGATGCGGATGTCATCGATaGAGCCATTGTCACCAAACC | + |
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Preference number: 4 (lower is better) Translates to: GATQCHCQASTRMLRVRRCGCHR*SHCHQT Trigger: GGTTTGGTGACAATGGCTGCATCGATGACATCCGCA...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACTACTGTCTTCGCACGTaGTGTCCAGGCCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: WLKYAKWRCHPVSLPSKHYCLRT*CPGPAA Trigger: AGCAGCTGGGCCTGGACAGCACGTGCGAAGACAGTA...GTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAGGATCTCTCGAGTGTTaGCCAGGCCTTCTTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GATQCHCQASTRMLRVRRGSLEC*PGLLYS Trigger: TGAGTAAAGAAGGCCTGGCCAACACTCGAGAGATCC...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTAAGTGCTGGAGGCCTTaGTCTTCTCTCCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YAKWRCHPVSLPSKHQDAKCWRP*SSLLFS Trigger: GGAGAAGAGGAGAGAAGACCAAGGCCTCCAGCACTT...AGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | AGAGGTAGCATAAGGCCTGAAAGGGACACTCCAGCAACCCAAGACCTGATACTATCCGAGAGCCGCATGTaGTACAGGAACCTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGSIRPERDTPATQDLILSESRM*YRNLST Trigger: GGTGGACAGGTTCCTGTATCACATGCGGCTCTCGGA...TAGTATCAGGTCTTGGGTTGCTGGAGTGTCCCTTTCAGGCCTTATGCTACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCCGCCCCACTCCGTGTTaGCGCACATCCGGCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPRPTPC*RTSGLR Trigger: ACGAAGGCCGGATGTGCGTCAACACGGAGTGGGGCG...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCGGTCTTCATGAAATCTaGCAGGCAGTCGGCTACGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAGLHEI*QAVGYV Trigger: TACGTAGCCGACTGCCTGGCAGATTTCATGAAGACC...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACTCCATGGCAGCCACGTaGTGTGTTTCGATCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WLKYAKWRCHPVSLPSKHSMAAT*CVSILP Trigger: GGGCAAGATCGAAACACAGCACGTGGCTGCCATGGA...GTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGATCCACCTTCTTGATCTaGTCCTCCTTCAGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CQASTRMLRVRREEGEPGSTFLI*SSFSLV Trigger: CACCAAGCTGAAGGAGGACCAGATCAAGAAGGTGGA...TCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCGCCGACTTCACAGTTaGGATCATCATAAGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTRMLRVRREEGEPGGRRRLHS*DHHKHK Trigger: CTTGTGCTTATGATGATCCCAACTGTGAAGTCGGCG...ACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | ACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAACGGTAGCCAGAGAGTaGGTCTTTTTCTTCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQCHCQASTRMLRVRREETVARE*VFFFSP Trigger: CGGGCTGAAGAAAAAGACCCACTCTCTGGCTACCGT...TTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACACGGTGACCTTGAAGTaGTGGAGGCCTTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLKYAKWRCHPVSLPSKHTVTLK*WRPWSS Trigger: AGAAGACCAAGGCCTCCAGCACTTCAAGGTCACCGT...GTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTGATTTCATTGGGCATTaGGTAGAACTGGCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASTRMLRVRREEGEPGGRDFIGH*VELALH Trigger: ATGGAGAGCCAGTTCTACCCAATGCCCAATGAAATC...ACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAAGCCCAAAGGCAGCTaGGCGCCCTTGAGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPKPKGS*APLRPM Trigger: CATGGGCCTCAAGGGCGCCCAGCTGCCTTTGGGCTT...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGATTTTTGGTCTTCATaGAATCTGCCAGGCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSDFWSS*NLPGSR Trigger: CCGACTGCCTGGCAGATTTCATGAAGACCAAAAATC...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACAGCCAATCTCACACCTaGGATCTTCATAGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLKYAKWRCHPVSLPSKHSQSHT*DLHSHR Trigger: CCTGTGGCTATGAAGATCCCAGGTGTGAGATTGGCT...GTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCTCCTCTTCTCCACGATaGCAGCCATGCCGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPSSSPR*QPCRHH Trigger: GTGGTGCCGGCATGGCTGCCATCGTGGAGAAGAGGA...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTCGGTCACTTTCAATCTaGGACAGGAATTTGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YAKWRCHPVSLPSKHQDARSLSI*DRNLVS Trigger: TGAAACCAAATTCCTGTCCCAGATTGAAAGTGACCG...AGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | TTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTTGCCATTCCCACGGGTaGTTTCATTGGGCATTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKVSPSLAKICQMEVPPSCHSHG*FHWALG Trigger: ACCCAATGCCCAATGAAATCACCCGTGGGAATGGCA...ACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | AGAGGTAGCATAAGGCCTGAAAGGGACACTCCAGCAACCCAAGACCTGATACTAGTTGCTTCCTGTCCCTaGAATCAAGCCAATCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGSIRPERDTPATQDLILVASCP*NQANLT Trigger: TGTGAGATTGGCTTGATTGCAGGGACAGGAAGCAAC...TAGTATCAGGTCTTGGGTTGCTGGAGTGTCCCTTTCAGGCCTTATGCTACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACCGGAAGAGGAGCCCCTaGCGGGTGAGGTCGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTIFVYLTVLERNAENSDRKRSP*RVRSIR Trigger: CCTGATCGACCTCACCCGGCAGGGGCTCCTCTTCCG...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTATCTTGCCCTTTGTATaGAGAGCAGAGGATTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSILPFV*RAEDFA Trigger: TGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGAT...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTAGCGAAAAGAGACGATaGTGCACACGTGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVSPSLAKICQMEVPPSSEKRR*CTRAGQ Trigger: CTGTCCAGCACGTGTGCACCATCGTCTCTTTTCGCT...ACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCACCTGTCCACCTTCTTaGTCTGGTCCTCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPTCPPS*SGPPSA Trigger: AGCTGAAGGAGGACCAGATCAAGAAGGTGGACAGGT...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCTCAAGACCCGAAACTTaGATCCTCCGAGATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPSRPET*ILRDPG Trigger: CCCTGGATCTCGGAGGATCCAAGTTTCGGGTCTTGA...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGGGAAAAGAAAAGGTaGAGCCCAGAGGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPREKKR*SPEAAS Trigger: AGAAGCTGCCTCTGGGCTTCACCTTTTCTTTTCCCT...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCCCCGCTGCCGTCTTCTaGCAACATAAATGTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPPAAVF*QHKCHI Trigger: GATGTGACATTTATGTTGTCAGAAGACGGCAGCGGG...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACTCGAGTCAGGATGGTTaGCAGAGCCGCTGCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WTIFVYLTVLERNAENSDSSQDG*QSRCAE Trigger: CTCTGCGCAGCGGCTCTGGCAACCATCCTGACTCGA...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| 3UTR CAA 72 bp | GGGCCAGATCCTTTGATTTTGAAAGTCAGCCCATCTTaGGCTAAAATATGCCAAATGGAGGTGCCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPDPLILKVSPS*AKICQMEVPPS Trigger: ACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAATCAAAGGATCTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR GCA 90 bp | ATTTTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCACTTTCCTTTCTCTGTaGCATCCGGCATCCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKVSPSLAKICQMEVPPTFLSL*HPASHR Trigger: TCTATGGGATGCCGGATGGCACAGAGAAAGGAAAGT...GGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACCAGAGGCAGTGGGGTTaGTGTCCTTCCCCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WTIFVYLTVLERNAENSDQRQWG*CPSPSL Trigger: AAGGCTTGGGGAAGGACACCAACCCCACTGCCTCTG...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CCA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACGTGACCTTGAAGTGCTaGAGGCCTTGGTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WTIFVYLTVLERNAENSDVTLKC*RPWSSL Trigger: GAGAGAAGACCAAGGCCTCCAGCACTTCAAGGTCAC...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR TCA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACAACTGGCTCTCCATCTaGACATTTTGCTGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTIFVYLTVLERNAENSDNWLSI*TFCWPS Trigger: AGAGGGCCAGCAAAATGTTCAGATGGAGAGCCAGTT...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | GCTGGAGGCCTTGGTCTTCTCTCCTCTTCTCCACGATGGCAGCCATaGCGGCACCACACATCTGGGCGGCCCTCCGAGACACAGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGGLGLLSSSPRWQP*RHHTSGRPSETQPH Trigger: GTGGGGCTGTGTCTCGGAGGGCCGCCCAGATGTGTGGTGCCGGCATGGCTGCCATCGTGGAGAAGAGGAGAGAAGACCAAGGCCTCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | GCTCTCGGGTCAACTGGAACAAAGCCAGCACCTTGTCGATCTGCTTaGGCTGGGCCTGTACCCGAGAGGCCACTGCGGTCACCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGSTGTKPAPCRSA*AGPVPERPLRSPWR Trigger: CCGCCATGGTGACCGCAGTGGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 90 bp | GCAGTGGGGTTGGTGTCCTTCCCCAAGCCTTTCTCCATCTCGGCCTaGAAGCGGGCCATGATGTCCACCAGGGTCTCATCCGAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AVGLVSFPKPFSISA*KRAMMSTRVSSESR Trigger: GCGGCTCTCGGATGAGACCCTGGTGGACATCATGGCCCGCTTCCAGGCCGAGATGGAGAAAGGCTTGGGGAAGGACACCAACCCCACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGACCGCCCCACTCCGTGTaGACGCACATCCGGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GATQCHCQASTRMLRVRRPPHSV*THIRPS Trigger: CGAAGGCCGGATGTGCGTCAACACGGAGTGGGGCGG...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | TCCTTCACCACAATACTGTCTTCGCACGTGCTGTCCAGGCCCAGCTaGTGCAGGATCCTCCTGACCTGCAGGAGGGCCAGCCGGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFTTILSSHVLSRPS*CRILLTCRRASRSL Trigger: AAGTGACCGGCTGGCCCTCCTGCAGGTCAGGAGGATCCTGCAGCAGCTGGGCCTGGACAGCACGTGCGAAGACAGTATTGTGGTGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 90 bp | AAGCCAGGATGTCCACGTCCAGGTCCTTGTGCTTCTTCATGGCAGTaGCCAGGCGGTTCACCACGTCTGTGTCCTGAACTCCCCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPGCPRPGPCASSWQ*PGGSPRLCPELPGP Trigger: AGGCCCGGGGAGTTCAGGACACAGACGTGGTGAACCGCCTGGCCACTGCCATGAAGAAGCACAAGGACCTGGACGTGGACATCCTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 90 bp | GCCCGCATCTTGTCCCGCACACCCAGGAGTTGCTCTCGGGTCAACTaGAACAAAGCCAGCACCTTGTCGATCTGCTTGCGCTGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARILSRTPRSCSRVN*NKASTLSICLRWAC Trigger: ACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCAACTCCTGGGTGTGCGGGACAAGATGCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | GGGCTCCTCCACACTCAGAGATGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCGGCTGCTGTAACCTCTaGGCTACAGCTGTGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLLHTQRCRGQCPGFPGAGCCNL*ATAVIR Trigger: TCTGATCACAGCTGTAGCCAAGAGGTTACAGCAGCC...GGCACCAGGGAAGCCAGGGCATTGGCCCCTGCATCTCTGAGTGTGGAGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | AGTTGCTCTCGGGTCAACTGGAACAAAGCCAGCACCTTGTCGATCTaGTTGCGCTGGGCCTGTACCCGAGAGGCCACTGCGGTCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SCSRVNWNKASTLSI*LRWACTREATAVTM Trigger: CATGGTGACCGCAGTGGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 90 bp | TGCGGAGCCGGGCCAGCTTCTTGTTCTCTCGGAGTCGAGTCAGGATaGTTGCCAGAGCCGCTGCGCAGAGATTGGCTGAGCGAAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CGAGPASCSLGVESG*LPEPLRRDWLSEKR Trigger: TCTCTTTTCGCTCAGCCAATCTCTGCGCAGCGGCTCTGGCAACCATCCTGACTCGACTCCGAGAGAACAAGAAGCTGGCCCGGCTCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CCA 90 bp | TGCTTGCCGGCGTTCAGGGAGCCCTCATCCACCTCCTTGTCATACTaGGTGCGGATGTCATCGATGCAGCCATTGTCACCAAACCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CLPAFREPSSTSLSY*VRMSSMQPLSPNPP Trigger: GGGCGGGTTTGGTGACAATGGCTGCATCGATGACATCCGCACCCAGTATGACAAGGAGGTGGATGAGGGCTCCCTGAACGCCGGCAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGGTCATCACCCGGCTGGGCCAATTTTGCTGGCCCTCTaGGGAGACTTGCACCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: EGEPGGRLVVPGHHPAGPILLAL*GDLHLQ Trigger: TTGAAGGTGCAAGTCTCCCAAGAGGGCCAGCAAAAT...TGGCCCAGCCGGGTGATGACCAGGGACCACCAGACGACCTCCTGGCTCACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCACCATGGCGGCCCCCTaGGTGCTTCCACTCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQCPGFPGAYKVNMTSEATMAAP*VLPLSD Trigger: GTCAGAGAGTGGAAGCACCAAGGGGGCCGCCATGGT...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 90 bp | GGCGTTTGGGGTACTGAGGGTGTGTTTTGTAGAGAGTTCCATCCATaGCCACTGTGGTGCGGAGCCGGGCCAGCTTCTTGTTCTCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVWGTEGVFCREFHP*PLWCGAGPASCSLG Trigger: TCCGAGAGAACAAGAAGCTGGCCCGGCTCCGCACCACAGTGGGCATGGATGGAACTCTCTACAAAACACACCCTCAGTACCCCAAACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | CCGTACTCTAGTTCAGCCCGCATCTTGTCCCGCACACCCAGGAGTTaGTCTCGGGTCAACTGGAACAAAGCCAGCACCTTGTCGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PYSSSARILSRTPRS*SRVNWNKASTLSIC Trigger: GCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCAACTCCTGGGTGTGCGGGACAAGATGCGGGCTGAACTAGAGTACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | ACACCCCAGATGCTCACAGAGCGCCCTGAGTGGGTGAGATTCCTCCTGGCTCCATTCAAGACCCGAAACTaGGATCCTCCGAGATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPQMLTERPEWVRFLLAPFKTRN*DPPRSR Trigger: CCTGGATCTCGGAGGATCCAAGTTTCGGGTCTTGAA...TGGAGCCAGGAGGAATCTCACCCACTCAGGGCGCTCTGTGAGCATCTGGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGGTCATCACAGGATCTCTCGAGTGTaGGCCAGGCCTTCTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: VRREEGEPGGRLVVPGHHRISRV*ARPSLL Trigger: GAGTAAAGAAGGCCTGGCCAACACTCGAGAGATCCT...GTGATGACCAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGTCGTCTGGTGGTCCCTGAACAAAGCCAGCACCTaGTCGATCTGCTTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLEYGERKVSQEVVWWSLNKAST*SICLRW Trigger: CCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTT...CAGGGACCACCAGACGACCTCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS TCA 90 bp | TGGCCAGGCGGTTCACCACGTCTGTGTCCTGAACTCCCCGGGCCTTaGACTTCTTGGTCCACGAAAGCAGAACACCCTCCTCCAACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WPGGSPRLCPELPGP*TSWSTKAEHPPPTY Trigger: ATAAGTTGGAGGAGGGTGTTCTGCTTTCGTGGACCAAGAAGTTCAAGGCCCGGGGAGTTCAGGACACAGACGTGGTGAACCGCCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS TCA 90 bp | TGCTTCTTCATGGCAGTGGCCAGGCGGTTCACCACGTCTGTGTCCTaGACTCCCCGGGCCTTGAACTTCTTGGTCCACGAAAGCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: CFFMAVARRFTTSVS*TPRALNFLVHESRT Trigger: TGTTCTGCTTTCGTGGACCAAGAAGTTCAAGGCCCGGGGAGTTCAGGACACAGACGTGGTGAACCGCCTGGCCACTGCCATGAAGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 90 bp | ACAGTGTCGTTAACCAAAGCCAGGATGTCCACGTCCAGGTCCTTGTaGTTCTTCATGGCAGTGGCCAGGCGGTTCACCACGTCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVSLTKARMSTSRSL*FFMAVARRFTTSVS Trigger: GGACACAGACGTGGTGAACCGCCTGGCCACTGCCATGAAGAAGCACAAGGACCTGGACGTGGACATCCTGGCTTTGGTTAACGACACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 90 bp | ACTGAGGGTGTGTTTTGTAGAGAGTTCCATCCATGCCCACTGTGGTaGGGAGCCGGGCCAGCTTCTTGTTCTCTCGGAGTCGAGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TEGVFCREFHPCPLW*GAGPASCSLGVESG Trigger: TCCTGACTCGACTCCGAGAGAACAAGAAGCTGGCCCGGCTCCGCACCACAGTGGGCATGGATGGAACTCTCTACAAAACACACCCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGATCCACGTCCAGGTCCTaGTGCTTCTTCATGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GATQCHCQASTRMLRVRRSTSRS*CFFMAV Trigger: CACTGCCATGAAGAAGCACAAGGACCTGGACGTGGA...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAAGTCTCCTCACCACCTaGTGTAGGCGTTTGGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GATQCHCQASTRMLRVRRSLLTT*CRRLGY Trigger: GTACCCCAAACGCCTACACAAGGTGGTGAGGAGACT...TCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | TATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTCATCGATGCAGCCATaGTCACCAAACCCGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YAKWRCHPVSLPSKHQDASSMQP*SPNPPH Trigger: GTGGGGCGGGTTTGGTGACAATGGCTGCATCGATGA...AGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGCAAGCACCAGGATGCTTAGAGTACGGAGAGAGGAAGGTGAGCCAGGAGGAGAGCAGAGGATTTaGCACCCCCAAACAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CQASTRMLRVRREEGEPGGEQRI*HPQTGD Trigger: GTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCC...TCCTGGCTCACCTTCCTCTCTCCGTACTCTAAGCATCCTGGTGCTTGCTTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCGTGGCCTTGAAGCCTTaGGTCCACCCTACTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAVALKP*VHPTRV Trigger: GACTCTAGTAGGGTGGACCAAAGGCTTCAAGGCCAC...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | AATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTAAGCGGACATCACAGTTaGGGACCAGTCTCCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NGGATQCHCQASTRMLRVSGHHS*GPVSSP Trigger: TGGTGAGGAGACTGGTCCCAAACTGTGATGTCCGCT...TACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGTAGCATAAGGCCTGAAAGGGACACTCCAGCAACCCAAGACCTGATACTAACCTTGTCGATCTGCTaGCGCTGGGCCTGTACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RGSIRPERDTPATQDLILTLSIC*RWACTR Trigger: TCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGT...TAGTATCAGGTCTTGGGTTGCTGGAGTGTCCCTTTCAGGCCTTATGCTACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCGGGATGGCGAAGATCTaGTTGTACATGCGCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQCPGFPGAYKVNMTSEAGMAKI*LYMRTD Trigger: GTCTGTGCGCATGTACAACAAGATCTTCGCCATCCC...GGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 90 bp | TTTGCTGGCCCTCTTGGGAGACTTGCACCTTCAAGACCCGAAACTTaGATCCTCCGAGATCCAGGGAAAGGAATTCCCCGTTTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FAGPLGRLAPSRPET*ILRDPGKGIPRFLS Trigger: GCTCAGAAAACGGGGAATTCCTTTCCCTGGATCTCGGAGGATCCAAGTTTCGGGTCTTGAAGGTGCAAGTCTCCCAAGAGGGCCAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | AGAGGTAGCATAAGGCCTGAAAGGGACACTCCAGCAACCCAAGACCTGATACTATCACAGTCGGTGGCCTaGAAGCCTTTGGTCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSIRPERDTPATQDLILSQSVA*KPLVHP Trigger: AGGGTGGACCAAAGGCTTCAAGGCCACCGACTGTGA...TAGTATCAGGTCTTGGGTTGCTGGAGTGTCCCTTTCAGGCCTTATGCTACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS TCA 90 bp | GGCAGTCGGCTACGTAGTCAAAAAGCTCCGTGCCATTCCCACGGGTaGTTTCATTGGGCATTGGGTAGAACTGGCTCTCCATCTGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GSRLRSQKAPCHSHG*FHWALGRTGSPSEH Trigger: ATGTTCAGATGGAGAGCCAGTTCTACCCAATGCCCAATGAAATCACCCGTGGGAATGGCACGGAGCTTTTTGACTACGTAGCCGACTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | CCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGGAAGTGCTGGAGGCCTaGGTCTTCTCTCCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLAKICQMEVPPSVTAKEVLEA*VFSPLL Trigger: GAGAAGAGGAGAGAAGACCAAGGCCTCCAGCACTTC...CTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 90 bp | ATCTCCATGGCAGCCACGTGCTGTGTTTCGATCTTGCCCTTTGTATaGAGAGCAGAGGATTTTGCACCCCCAAACAGGAGACCAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISMAATCCVSILPFV*RAEDFAPPNRRPTL Trigger: CAAAGTTGGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGGGGCCAATGCCCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTAACTCGTTTCTCCTCTaGATGGCTTCTCTGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CRGQCPGFPGAYKVNMTSNSFLL*MASLSM Trigger: CATGCTCAGAGAAGCCATCAAGAGGAGAAACGAGTT...ACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGGGCATTGGCCCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTAAGTGCGGGTGCAGCTaGTACAGTGTGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LKVSPSLAKICQMEVPPSKCGCS*YSVPST Trigger: CGTGGATGGCACACTGTACAAGCTGCACCCGCACTT...ACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | CTTCTTTACTCATCTCCATGGCAGCCACGTGCTGTGTTTCGATCTTaGCCTTTGTATGGAGAGCAGAGGATTTTGCACCCCCAAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLYSSPWQPRAVFRS*PLYGEQRILHPQTG Trigger: TCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGATGAGTAAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | AATGGAGGTGCCACCCAGTGTCACTGCCAAGCAAGCACCAGGATGCTTAGAGTAAACAGGAGACCAACTTaGGCCATCTTCAGCAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: NGGATQCHCQASTRMLRVNRRPT*AIFSKI Trigger: TATCTTGCTGAAGATGGCCAAAGTTGGTCTCCTGTT...TACTCTAAGCATCCTGGTGCTTGCTTGGCAGTGACACTGGGTGGCACCTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | CAGAGGCAGCTTCTTATGTGTCAGATTTTTGGTCTTCATGAAATCTaGCAGGCAGTCGGCTACGTAGTCAAAAAGCTCCGTGCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QRQLLMCQIFGLHEI*QAVGYVVKKLRAIP Trigger: GGGAATGGCACGGAGCTTTTTGACTACGTAGCCGACTGCCTGGCAGATTTCATGAAGACCAAAAATCTGACACATAAGAAGCTGCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 90 bp | GTGCTGTGTTTCGATCTTGCCCTTTGTATGGAGAGCAGAGGATTTTaGACCCCCAAACAGGAGACCAACTTTGGCCATCTTCAGCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLCFDLALCMESRGF*TPKQETNFGHLQQD Trigger: ATCTTGCTGAAGATGGCCAAAGTTGGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | CCTGGCTTCCCTGGTGCCTATAAAGTCAACATGACAAGTGAGGCCATGTTAACCTGCTGTGTTTCGATCTaGCCCTTTGTATGGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFPGAYKVNMTSEAMLTCCVSI*PFVWRA Trigger: TGCTCTCCATACAAAGGGCAAGATCGAAACACAGCA...GGTTAACATGGCCTCACTTGTCATGTTGACTTTATAGGCACCAGGGAAGCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | CCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTGTCACTGCCAAGTTTCGATCTTGCCCTTaGTATGGAGAGCAGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: PSLAKICQMEVPPSVTAKFRSCP*YGEQRI Trigger: AATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAA...CTTGGCAGTGACACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | TTGAAAGTCAGCCCATCTTTGGCTAAAATATGCCAAATGGAGGTGCCACCCAGTATGGCGAAGATCTTGTaGTACATGCGCACAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKVSPSLAKICQMEVPPSMAKIL*YMRTDL Trigger: GAGGTCTGTGCGCATGTACAACAAGATCTTCGCCAT...ACTGGGTGGCACCTCCATTTGGCATATTTTAGCCAAAGATGGGCTGACTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS-3UTR CAA 90 bp | TGGACAATATTTGTATACCTAACAGTCCTTGAAAGAAATGCAGAAAACAGCGACACAGAGGCAGTGGGGTaGGTGTCCTTCCCCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WTIFVYLTVLERNAENSDTEAVG*VSFPKP Trigger: AGGCTTGGGGAAGGACACCAACCCCACTGCCTCTGT...GTCGCTGTTTTCTGCATTTCTTTCAAGGACTGTTAGGTATACAAATATTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | AGAGTTCCATCCATGCCCACTGTGGTGCGGAGCCGGGCCAGCTTCTaGTTCTCTCGGAGTCGAGTCAGGATGGTTGCCAGAGCCGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVPSMPTVVRSRASF*FSRSRVRMVARAAA Trigger: CGCAGCGGCTCTGGCAACCATCCTGACTCGACTCCGAGAGAACAAGAAGCTGGCCCGGCTCCGCACCACAGTGGGCATGGATGGAACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | TGCTCTCGGGTCAACTGGAACAAAGCCAGCACCTTGTCGATCTGCTaGCGCTGGGCCTGTACCCGAGAGGCCACTGCGGTCACCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSRVNWNKASTLSIC*RWACTREATAVTMA Trigger: CGCCATGGTGACCGCAGTGGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 72 bp | CGGGTCAACTGGAACAAAGCCAGCACCTTGTCGATCTaGTTGCGCTGGGCCTGTACCCGAGAGGCCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVNWNKASTLSI*LRWACTREATA Trigger: CGCAGTGGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 72 bp | CTTGGTCTTCTCTCCTCTTCTCCACGATGGCAGCCATaGCGGCACCACACATCTGGGCGGCCCTCCGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGLLSSSPRWQP*RHHTSGRPSET Trigger: TGTCTCGGAGGGCCGCCCAGATGTGTGGTGCCGGCATGGCTGCCATCGTGGAGAAGAGGAGAGAAGACCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | GGGCCAGCTTCTTGTTCTCTCGGAGTCGAGTCAGGATaGTTGCCAGAGCCGCTGCGCAGAGATTGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPASCSLGVESG*LPEPLRRDWLS Trigger: GCTCAGCCAATCTCTGCGCAGCGGCTCTGGCAACCATCCTGACTCGACTCCGAGAGAACAAGAAGCTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | TGGAACAAAGCCAGCACCTTGTCGATCTGCTTGCGCTaGGCCTGTACCCGAGAGGCCACTGCGGTCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: WNKASTLSICLR*ACTREATAVTM Trigger: CATGGTGACCGCAGTGGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CAA 72 bp | TCCATGCCCACTGTGGTGCGGAGCCGGGCCAGCTTCTaGTTCTCTCGGAGTCGAGTCAGGATGGTTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SMPTVVRSRASF*FSRSRVRMVAR Trigger: TCTGGCAACCATCCTGACTCGACTCCGAGAGAACAAGAAGCTGGCCCGGCTCCGCACCACAGTGGGCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CAA 90 bp | GGAGCCGGGCCAGCTTCTTGTTCTCTCGGAGTCGAGTCAGGATGGTaGCCAGAGCCGCTGCGCAGAGATTGGCTGAGCGAAAAGAGACGA | + |
|
Preference number: 6 (lower is better) Translates to: GAGPASCSLGVESGW*PEPLRRDWLSEKRR Trigger: TCGTCTCTTTTCGCTCAGCCAATCTCTGCGCAGCGGCTCTGGCAACCATCCTGACTCGACTCCGAGAGAACAAGAAGCTGGCCCGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 72 bp | TCAACTGGAACAAAGCCAGCACCTTGTCGATCTGCTTaGGCTGGGCCTGTACCCGAGAGGCCACTGCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: STGTKPAPCRSA*AGPVPERPLRS Trigger: TGACCGCAGTGGCCTCTCGGGTACAGGCCCAGCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CCA 72 bp | CCAGGATGTCCACGTCCAGGTCCTTGTGCTTCTTCATaGCAGTGGCCAGGCGGTTCACCACGTCTGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGCPRPGPCASS*QWPGGSPRLCP Trigger: AGGACACAGACGTGGTGAACCGCCTGGCCACTGCCATGAAGAAGCACAAGGACCTGGACGTGGACATCCTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CCA 72 bp | TCCACGCCCACGGTGACCTTGAAGTGCTGGAGGCCTTaGTCTTCTCTCCTCTTCTCCACGATGGCAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: STPTVTLKCWRP*SSLLFSTMAAM Trigger: CATGGCTGCCATCGTGGAGAAGAGGAGAGAAGACCAAGGCCTCCAGCACTTCAAGGTCACCGTGGGCGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CAA 90 bp | CCCACAGTGTCGTTAACCAAAGCCAGGATGTCCACGTCCAGGTCCTaGTGCTTCTTCATGGCAGTGGCCAGGCGGTTCACCACGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTVSLTKARMSTSRS*CFFMAVARRFTTSV Trigger: CACAGACGTGGTGAACCGCCTGGCCACTGCCATGAAGAAGCACAAGGACCTGGACGTGGACATCCTGGCTTTGGTTAACGACACTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 72 bp | AGTTCAGCCCGCATCTTGTCCCGCACACCCAGGAGTTaGTCTCGGGTCAACTGGAACAAAGCCAGCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSARILSRTPRS*SRVNWNKASTL Trigger: CAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCAACTCCTGGGTGTGCGGGACAAGATGCGGGCTGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS GCA 72 bp | CCACCTCCTTGTCATACTGGGTGCGGATGTCATCGATaGAGCCATTGTCACCAAACCCGCCCCACTCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPPCHTGCGCHR*SHCHQTRPTPC Trigger: ACACGGAGTGGGGCGGGTTTGGTGACAATGGCTGCATCGATGACATCCGCACCCAGTATGACAAGGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CCA 72 bp | TTGTCCCGCACACCCAGGAGTTGCTCTCGGGTCAACTaGAACAAAGCCAGCACCTTGTCGATCTGCTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSRTPRSCSRVN*NKASTLSICLR Trigger: GCGCAAGCAGATCGACAAGGTGCTGGCTTTGTTCCAGTTGACCCGAGAGCAACTCCTGGGTGTGCGGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CCA 72 bp | AGTGTGCCATCCACGCCCACGGTGACCTTGAAGTGCTaGAGGCCTTGGTCTTCTCTCCTCTTCTCCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: SVPSTPTVTLKC*RPWSSLLFSTM Trigger: CATCGTGGAGAAGAGGAGAGAAGACCAAGGCCTCCAGCACTTCAAGGTCACCGTGGGCGTGGATGGCACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
||
| CDS CAA 72 bp | CCAGCTTCTTGTTCTCTCGGAGTCGAGTCAGGATGGTaGCCAGAGCCGCTGCGCAGAGATTGGCTGAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PASCSLGVESGW*PEPLRRDWLSE Trigger: TTCGCTCAGCCAATCTCTGCGCAGCGGCTCTGGCAACCATCCTGACTCGACTCCGAGAGAACAAGAAGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | TTAACCAAAGCCAGGATGTCCACGTCCAGGTCCTTGTaGTTCTTCATGGCAGTGGCCAGGCGGTTCACCACG | + |
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Preference number: 6 (lower is better) Translates to: LTKARMSTSRSL*FFMAVARRFTT Trigger: CGTGGTGAACCGCCTGGCCACTGCCATGAAGAAGCACAAGGACCTGGACGTGGACATCCTGGCTTTGGTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | GTGTTTTGTAGAGAGTTCCATCCATGCCCACTGTGGTaGGGAGCCGGGCCAGCTTCTTGTTCTCTCGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VFCREFHPCPLW*GAGPASCSLGV Trigger: GACTCCGAGAGAACAAGAAGCTGGCCCGGCTCCGCACCACAGTGGGCATGGATGGAACTCTCTACAAAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | GGTACTGAGGGTGTGTTTTGTAGAGAGTTCCATCCATaGCCACTGTGGTGCGGAGCCGGGCCAGCTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GTEGVFCREFHP*PLWCGAGPASC Trigger: ACAAGAAGCTGGCCCGGCTCCGCACCACAGTGGGCATGGATGGAACTCTCTACAAAACACACCCTCAGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | GCTCCAGGCCCAAATCCACCAGGATCTCTCGAGTGTTaGCCAGGCCTTCTTTACTCATCTCCATGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: APGPNPPGSLEC*PGLLYSSPWQP Trigger: TGGCTGCCATGGAGATGAGTAAAGAAGGCCTGGCCAACACTCGAGAGATCCTGGTGGATTTGGGCCTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | GCGTTCAGGGAGCCCTCATCCACCTCCTTGTCATACTaGGTGCGGATGTCATCGATGCAGCCATTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: AFREPSSTSLSY*VRMSSMQPLSP Trigger: TGGTGACAATGGCTGCATCGATGACATCCGCACCCAGTATGACAAGGAGGTGGATGAGGGCTCCCTGAACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | TTGTCATACTGGGTGCGGATGTCATCGATGCAGCCATaGTCACCAAACCCGCCCCACTCCGTGTTGACGCAC | + |
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Preference number: 6 (lower is better) Translates to: LSYWVRMSSMQP*SPNPPHSVLTH Trigger: GTGCGTCAACACGGAGTGGGGCGGGTTTGGTGACAATGGCTGCATCGATGACATCCGCACCCAGTATGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | CCCTCTTGGGAGACTTGCACCTTCAAGACCCGAAACTaGGATCCTCCGAGATCCAGGGAAAGGAATTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PSWETCTFKTRN*DPPRSRERNSP Trigger: CGGGGAATTCCTTTCCCTGGATCTCGGAGGATCCAAGTTTCGGGTCTTGAAGGTGCAAGTCTCCCAAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | TTTTTCTTCAGCCCGTACTCTAGTTCAGCCCGCATCTaGTCCCGCACACCCAGGAGTTGCTCTCGGGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FFFSPYSSSARI*SRTPRSCSRVN Trigger: GTTGACCCGAGAGCAACTCCTGGGTGTGCGGGACAAGATGCGGGCTGAACTAGAGTACGGGCTGAAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | GAGTGGGTCTTTTTCTTCAGCCCGTACTCTAGTTCAGCCCGCATCTaGTCCCGCACACCCAGGAGTTGCTCTCGGGTCAACTGGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: EWVFFFSPYSSSARI*SRTPRSCSRVNWNK Trigger: TTTGTTCCAGTTGACCCGAGAGCAACTCCTGGGTGTGCGGGACAAGATGCGGGCTGAACTAGAGTACGGGCTGAAGAAAAAGACCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | CCTCTTGGGAGACTTGCACCTTCAAGACCCGAAACTTaGATCCTCCGAGATCCAGGGAAAGGAATTCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: PLGRLAPSRPET*ILRDPGKGIPR Trigger: ACGGGGAATTCCTTTCCCTGGATCTCGGAGGATCCAAGTTTCGGGTCTTGAAGGTGCAAGTCTCCCAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | TCATCTCCATGGCAGCCACGTGCTGTGTTTCGATCTTaGCCTTTGTATGGAGAGCAGAGGATTTTGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: SSPWQPRAVFRS*PLYGEQRILHP Trigger: GGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | GCCAGGCCTTCTTTACTCATCTCCATGGCAGCCACGTaGTGTGTTTCGATCTTGCCCTTTGTATGGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ARPSLLISMAAT*CVSILPFVWRA Trigger: TGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGATGAGTAAAGAAGGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | GCAGCCACGTGCTGTGTTTCGATCTTGCCCTTTGTATaGAGAGCAGAGGATTTTGCACCCCCAAACAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: AATCCVSILPFV*RAEDFAPPNRR Trigger: TCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | CTCCATCTGAACATTTTGCTGGCCCTCTTGGGAGACTaGCACCTTCAAGACCCGAAACTTGGATCCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LHLNILLALLGD*HLQDPKLGSSE Trigger: CTCGGAGGATCCAAGTTTCGGGTCTTGAAGGTGCAAGTCTCCCAAGAGGGCCAGCAAAATGTTCAGATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | GGGCATTGGGTAGAACTGGCTCTCCATCTGAACATTTaGCTGGCCCTCTTGGGAGACTTGCACCTTCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GHWVELALHLNI*LALLGDLHLQD Trigger: GTCTTGAAGGTGCAAGTCTCCCAAGAGGGCCAGCAAAATGTTCAGATGGAGAGCCAGTTCTACCCAATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | CTCATCTCCATGGCAGCCACGTGCTGTGTTTCGATCTaGCCCTTTGTATGGAGAGCAGAGGATTTTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: LISMAATCCVSI*PFVWRAEDFAP Trigger: GGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | TACTCATCTCCATGGCAGCCACGTGCTGTGTTTCGATCTTGCCCTTaGTATGGAGAGCAGAGGATTTTGCACCCCCAAACAGGAGACCAA | + |
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Preference number: 6 (lower is better) Translates to: YSSPWQPRAVFRSCP*YGEQRILHPQTGDQ Trigger: TTGGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGATGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | CCTTCTTTACTCATCTCCATGGCAGCCACGTGCTGTGTTTCGATCTaGCCCTTTGTATGGAGAGCAGAGGATTTTGCACCCCCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: PSLLISMAATCCVSI*PFVWRAEDFAPPNR Trigger: CCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACGTGGCTGCCATGGAGATGAGTAAAGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS TCA 72 bp | CTACGTAGTCAAAAAGCTCCGTGCCATTCCCACGGGTaGTTTCATTGGGCATTGGGTAGAACTGGCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LRSQKAPCHSHG*FHWALGRTGSP Trigger: TGGAGAGCCAGTTCTACCCAATGCCCAATGAAATCACCCGTGGGAATGGCACGGAGCTTTTTGACTACGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | CTCCGTGCCATTCCCACGGGTGATTTCATTGGGCATTaGGTAGAACTGGCTCTCCATCTGAACATTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRAIPTGDFIGH*VELALHLNILL Trigger: CAGCAAAATGTTCAGATGGAGAGCCAGTTCTACCCAATGCCCAATGAAATCACCCGTGGGAATGGCACGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CCA 72 bp | TTGGGACCAGTCTCCTCACCACCTTGTGTAGGCGTTTaGGGTACTGAGGGTGTGTTTTGTAGAGAGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LGPVSSPPCVGV*GTEGVFCREFH Trigger: ATGGAACTCTCTACAAAACACACCCTCAGTACCCCAAACGCCTACACAAGGTGGTGAGGAGACTGGTCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | CGTGCTGTGTTTCGATCTTGCCCTTTGTATGGAGAGCAGAGGATTTaGCACCCCCAAACAGGAGACCAACTTTGGCCATCTTCAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RAVFRSCPLYGEQRI*HPQTGDQLWPSSAR Trigger: TCTTGCTGAAGATGGCCAAAGTTGGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAACACAGCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 90 bp | GATTTCATTGGGCATTGGGTAGAACTGGCTCTCCATCTGAACATTTaGCTGGCCCTCTTGGGAGACTTGCACCTTCAAGACCCGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: DFIGHWVELALHLNI*LALLGDLHLQDPKL Trigger: AAGTTTCGGGTCTTGAAGGTGCAAGTCTCCCAAGAGGGCCAGCAAAATGTTCAGATGGAGAGCCAGTTCTACCCAATGCCCAATGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | TTCGATCTTGCCCTTTGTATGGAGAGCAGAGGATTTTaGACCCCCAAACAGGAGACCAACTTTGGCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: FDLALCMESRGF*TPKQETNFGHL Trigger: AAGATGGCCAAAGTTGGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS CAA 72 bp | TTTCGATCTTGCCCTTTGTATGGAGAGCAGAGGATTTaGCACCCCCAAACAGGAGACCAACTTTGGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: FRSCPLYGEQRI*HPQTGDQLWPS Trigger: AGATGGCCAAAGTTGGTCTCCTGTTTGGGGGTGCAAAATCCTCTGCTCTCCATACAAAGGGCAAGATCGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS TCA 72 bp | GAGGCAGCTTCTTATGTGTCAGATTTTTGGTCTTCATaGAATCTGCCAGGCAGTCGGCTACGTAGTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: EAASYVSDFWSS*NLPGSRLRSQK Trigger: TTTTTGACTACGTAGCCGACTGCCTGGCAGATTTCATGAAGACCAAAAATCTGACACATAAGAAGCTGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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| CDS GCA 72 bp | CTTCTTATGTGTCAGATTTTTGGTCTTCATGAAATCTaGCAGGCAGTCGGCTACGTAGTCAAAAAGCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: LLMCQIFGLHEI*QAVGYVVKKLR Trigger: ACGGAGCTTTTTGACTACGTAGCCGACTGCCTGGCAGATTTCATGAAGACCAAAAATCTGACACATAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020277.9 |
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