Pregenerated sensors for HK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037012Ensembl transcript IDs: ENSMUST00000072357.14, ENSMUST00000099691.11, ENSMUST00000116238.9, ENSMUST00000130422.8, ENSMUST00000139228.8, ENSMUST00000143179.2, ENSMUST00000149534.2, ENSMUST00000152761.8
Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGGCAGGCTGCGGCGGGTGCAGGGAGGGGGAAGGGAACAGCAGTaGCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: DGRLRRVQGGGREQQ*HVHTRPSGHAPVGR Trigger: CCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTGCACCCGCCGCAGCCTGCCATC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 90 bp | GTGATGCTCCGTTACTGCAGTCCCCTTCCTCCCTCTGCGGCAGAGTaGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: VMLRYCSPLPPSAAE*VPALGLPAELAGWN Trigger: GTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAAGGGGACTGCAGTAACGGAGCATCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR GCA 90 bp | GGTATTCTATGTGATGCTCCGTTACTGCAGTCCCCTTCCTCCCTCTaGGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GILCDAPLLQSPSSL*GRVGAGAGSPSGAC Trigger: GCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAAGGGGACTGCAGTAACGGAGCATCACATAGAATACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 90 bp | GGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTaGGGGGAAGGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GVRQCLLVITHFTRG*GEGGRRLHRWAWKG Trigger: GCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCCTTCCCCCCACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR GCA 90 bp | ACGCCTGCGGTAGACGTGGGTGCCACTACGTTCACGCTTGGGCAATaGATGGCCAGGTCGAACTTGAATCATGCAAAGTGGCAGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TPAVDVGATTFTLGQ*MARSNLNHAKWQGR Trigger: CCTGCCCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCATGCATTGCCCAAGCGTGAACGTAGTGGCACCCACGTCTACCGCAGGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 90 bp | AACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTaGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACA | + |
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Preference number: 1 (lower is better) Translates to: NSSAMFTLALQATPL*AGVRQCLLVITHFT Trigger: TGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 90 bp | ACGCTTGGGCAATGCATGGCCAGGTCGAACTTGAATCATGCAAAGTaGCAGGGCAGGGATGAGGGGTCCAGGCGAGAGATCAGATCATCA | + |
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Preference number: 1 (lower is better) Translates to: TLGQCMARSNLNHAK*QGRDEGSRREIRSS Trigger: TGATGATCTGATCTCTCGCCTGGACCCCTCATCCCTGCCCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCATGCATTGCCCAAGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 90 bp | GAACTCACTCCTCCATTTCCCAAGTGCTGGGACTATAGGCATACCTaGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: ELTPPFPKCWDYRHT*GALKLSPHPGVHKA Trigger: GGCTTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATAGTCCCAGCACTTGGGAAATGGAGGAGTGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR CCA 90 bp | GTAGCCAAGGAGGGACTTGAACTCACTCCTCCATTTCCCAAGTGCTaGGACTATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: VAKEGLELTPPFPKC*DYRHTWGALKLSPH Trigger: GTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATAGTCCCAGCACTTGGGAAATGGAGGAGTGAGTTCAAGTCCCTCCTTGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR GCA 90 bp | TATGTAGCCAAGGAGGGACTTGAACTCACTCCTCCATTTCCCAAGTaGTGGGACTATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: YVAKEGLELTPPFPK*WDYRHTWGALKLSP Trigger: GGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATAGTCCCAGCACTTGGGAAATGGAGGAGTGAGTTCAAGTCCCTCCTTGGCTACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR CCA 90 bp | CACCACCATCACGAGACAAAACAAAATGCAAGACTGTCAATAATGTaGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTGGCATT | + |
|
Preference number: 1 (lower is better) Translates to: HHHHETKQNARLSIM*LGLAPRTDRQLSGI Trigger: AATGCCACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 90 bp | ACTCCGACTTTTGAATCAGTACAAAGTTTACTAGACATACGACAATaGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: TPTFESVQSLLDIRQ*LTKAMGDSSDGVVL Trigger: CAAAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTCAAAAGTCGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR-3UTR CCA 90 bp | TTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGGGAAGGGTGGCGGGCTaGGGGCTGGGAGGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: FTLALQATPLWAGVRQCLGRVAG*GLGGSW Trigger: CCAGGATCCTCCCAGCCCCCAGCCCGCCACCCTTCC...CAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR GCA 90 bp | TTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGTCCCCTTCCTCCCTCTaGGGCAGAGTGGGTGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: FTLALQATPLWAGVRQCLSPSSL*GRVGAG Trigger: GCCGGCACCCACTCTGCCGCAGAGGGAGGAAGGGGA...CAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGCCCTCTGCGGCAGAGTaGGTGCCGGCGCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GEGNSSAMFTLALQATPLPSAAE*VPALGL Trigger: GAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGG...CAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGTCCCCTTCCTCCCTCTaGGGCAGAGTGGGTGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGSPSSL*GRVGAG Trigger: GCCGGCACCCACTCTGCCGCAGAGGGAGGAAGGGGA...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACAGTGGGTGCCGGCGCTaGGTCTCCCAGCGGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: QGGGREQQCHVHTRPSGHSGCRR*VSQRSL Trigger: CAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACT...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTCGCTCTTTCCTGGCTaGACGCCTGCGGTAGACGTG | + |
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Preference number: 2 (lower is better) Translates to: GEGNSSAMFTLALQATPLSLFPG*TPAVDV Trigger: CACGTCTACCGCAGGCGTCCAGCCAGGAAAGAGCGA...CAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATTTGAATCATGCAAAGTaGCAGGGCAGGGATGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDLNHAK*QGRDEG Trigger: CCCCTCATCCCTGCCCTGCCACTTTGCATGATTCAA...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCGGAAGGGTGGCGGGCTaGGGGCTGGGAGGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLGRVAG*GLGGSW Trigger: CCAGGATCCTCCCAGCCCCCAGCCCGCCACCCTTCC...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR GCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTCTGCGGCAGAGTGGGTaGCGGCGCTGGGTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSLRQSG*RRWVSQ Trigger: CTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAG...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGTGATGCTCCGTTACTaGAGTCCCCTTCCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGGGREQQCHVHTRPSGHVMLRY*SPLPPS Trigger: AGAGGGAGGAAGGGGACTGCAGTAACGGAGCATCAC...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTTGGCCAGGTCGAACTTaGATCATGCAAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GHAPVGRSPAVSAGDNTLWPGRT*IMQSGR Trigger: CCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCA...AAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGTGGCCAGGTCGAACTTaGATCATGCAAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGWPGRT*IMQSGR Trigger: CCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCA...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR GCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGGCAGGCTGCGGCGGGTaGAGGGAGGGGGAAGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RWEIPVMALFCGLVLPSKAGCGG*REGEGN Trigger: GTTCCCTTCCCCCTCCCTGCACCCGCCGCAGCCTGC...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAAGGAAGGGTGGCGGGCTaGGGGCTGGGAGGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: YRHTWGALKLSPHPGVHKGRVAG*GLGGSW Trigger: CCAGGATCCTCCCAGCCCCCAGCCCGCCACCCTTCC...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR-3UTR CCA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCCACTTCACACGGGGGTaGGGGGAAGGAGGGAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLHFTRG*GEGGRR Trigger: TCGCCTCCCTCCTTCCCCCCACCCCCGTGTGAAGTG...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTCCCTCTGCGGCAGAGTaGGTGCCGGCGCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVPSAAE*VPALGL Trigger: GAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGG...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR GCA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTCTGCGGCAGAGTGGGTaGCGGCGCTGGGTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TYDNGSLKRWEIPVMALFLRQSG*RRWVSQ Trigger: CTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAG...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAAGCGGAGCTTGCTGGGTaGAACACGGGGGCGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: YRHTWGALKLSPHPGVHKAELAG*NTGAVC Trigger: ACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGC...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR-3UTR GCA 90 bp | CACCACCATCACGAGACAAAACAAAATGCAAGACTGTCAATAATGTGGCTAGGACTGCGGCAGAGTGGGTaGCGGCGCTGGGTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: HHHHETKQNARLSIMWLGLRQSG*RRWVSQ Trigger: CTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAG...TCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGACCCTCTGCGGCAGAGTaGGTGCCGGCGCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGPSAAE*VPALGL Trigger: GAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGG...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR TCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTGGCCAGGTCGAACTTaGATCATGCAAAGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVWPGRT*IMQSGR Trigger: CCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCA...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTGAATCATGCAAAGTaGCAGGGCAGGGATGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVLNHAK*QGRDEG Trigger: CCCCTCATCCCTGCCCTGCCACTTTGCATGATTCAA...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGATCGCTCTTTCCTGGCTaGACGCCTGCGGTAGACGTG | + |
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Preference number: 2 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGSLFPG*TPAVDV Trigger: CACGTCTACCGCAGGCGTCCAGCCAGGAAAGAGCGA...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR TCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGACAACTCAGTGGCATTaGTACATCCAAATGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: RWEIPVMALFCGLVLPSKTTQWH*YIQMGW Trigger: CCATCCCATTTGGATGTATCAATGCCACTGAGTTGT...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAACGTTGTTTTGTGGGTTaGTTCTTCCTAGCAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: YRHTWGALKLSPHPGVHKRCFVG*FFLARW Trigger: CCATCTTGCTAGGAAGAACCAACCCACAAAACAACG...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| 3UTR-3UTR GCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGAGTGATGCTCCGTTACTaGAGTCCCCTTCCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGVMLRY*SPLPPS Trigger: AGAGGGAGGAAGGGGACTGCAGTAACGGAGCATCAC...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR-3UTR CCA 90 bp | GACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTCTTCCTAGCAAGATaGAGACAAGATGTTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: DNGSLKRWEIPVMALFCGFFLAR*RQDVFP Trigger: GGGGAAAACATCTTGTCTCCATCTTGCTAGGAAGAA...CCCACAAAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 72 bp | CGTTACTGCAGTCCCCTTCCTCCCTCTGCGGCAGAGTaGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: RYCSPLPPSAAE*VPALGLPAELA Trigger: AGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAAGGGGACTGCAGTAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR GCA 72 bp | TGTGATGCTCCGTTACTGCAGTCCCCTTCCTCCCTCTaGGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: CDAPLLQSPSSL*GRVGAGAGSPS Trigger: GCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAAGGGGACTGCAGTAACGGAGCATCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR CCA 72 bp | AGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTaGTCGTCGGTTCTAGAGAGGAGTGCTGGAAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: SGACWVEHGGGV*SSVLERSAGRV Trigger: CACCCTTCCAGCACTCCTCTCTAGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| 3UTR GCA 72 bp | GCGCTCCGGGTGGTATTCTATGTGATGCTCCGTTACTaGAGTCCCCTTCCTCCCTCTGCGGCAGAGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALRVVFYVMLRY*SPLPPSAAEWV Trigger: CACCCACTCTGCCGCAGAGGGAGGAAGGGGACTGCAGTAACGGAGCATCACATAGAATACCACCCGGAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGATGGCCAGGTCGAACTaGAATCATGCAAAGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GEGNSSAMFTLALQATPLMARSN*NHAKWQ Trigger: CTGCCACTTTGCATGATTCAAGTTCGACCTGGCCAT...CAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTATGGCCAGGTCGAACTaGAATCATGCAAAGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKGTAVPCSHSPFRPRPCMARSN*NHAKWQ Trigger: CTGCCACTTTGCATGATTCAAGTTCGACCTGGCCAT...ACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR TCA 72 bp | CGTTCACGCTTGGGCAATGCATGGCCAGGTCGAACTTaGATCATGCAAAGTGGCAGGGCAGGGATGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSRLGNAWPGRT*IMQSGRAGMRG Trigger: ACCCCTCATCCCTGCCCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCATGCATTGCCCAAGCGTGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR CCA 72 bp | CAATGCATGGCCAGGTCGAACTTGAATCATGCAAAGTaGCAGGGCAGGGATGAGGGGTCCAGGCGAGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QCMARSNLNHAK*QGRDEGSRREI Trigger: GATCTCTCGCCTGGACCCCTCATCCCTGCCCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCATGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR CCA 72 bp | CCTCCATTTCCCAAGTGCTGGGACTATAGGCATACCTaGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PPFPKCWDYRHT*GALKLSPHPGV Trigger: GACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATAGTCCCAGCACTTGGGAAATGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCATGGCCAGGTCGAACTaGAATCATGCAAAGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLMARSN*NHAKWQ Trigger: CTGCCACTTTGCATGATTCAAGTTCGACCTGGCCAT...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCACCCAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGGACAACTCAGTGGCATaGATACATCCAAATGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LPTQESIKPLAWLSPYAKDNSVA*IHPNGM Trigger: CATCCCATTTGGATGTATCAATGCCACTGAGTTGTC...CTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTGGGTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCACCATATGCTAAGCCCTTGCCCCCACCCCAAGGAAACACCACTCCGACTATTCCAGTGATGGCGTaGTTTTGTGGGTTGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSPYAKPLPPPQGNTTPTIPVMA*FCGLVL Trigger: AAGAACCAACCCACAAAACAACGCCATCACTGGAAT...AGTCGGAGTGGTGTTTCCTTGGGGTGGGGGCAAGGGCTTAGCATATGGTGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| 3UTR-3UTR CAA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTACTCCACAGATGGGCTaGGAAGGGCCCAGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: TYDNGSLKRWEIPVMALFTPQMG*EGPRRQ Trigger: CTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGT...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR GCA 72 bp | AAGGAGGGACTTGAACTCACTCCTCCATTTCCCAAGTaGTGGGACTATAGGCATACCTGGGGAGCTTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KEGLELTPPFPK*WDYRHTWGALK Trigger: CTTCAAAGCTCCCCAGGTATGCCTATAGTCCCAGCACTTGGGAAATGGAGGAGTGAGTTCAAGTCCCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| 3UTR CCA 72 bp | GAGGGACTTGAACTCACTCCTCCATTTCCCAAGTGCTaGGACTATAGGCATACCTGGGGAGCTTTGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EGLELTPPFPKC*DYRHTWGALKL Trigger: AAGCTTCAAAGCTCCCCAGGTATGCCTATAGTCCCAGCACTTGGGAAATGGAGGAGTGAGTTCAAGTCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| 3UTR CCA 72 bp | TTTGAATCAGTACAAAGTTTACTAGACATACGACAATaGCTCACTAAAGCGATGGGAGATTCCAGTGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: FESVQSLLDIRQ*LTKAMGDSSDG Trigger: GCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGCTGGGCCGCCCGCTTaGACACCACCCCACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: WVPALGLPAELAGWNTGAAGPPA*TPPHTR Trigger: CCGTGTGTGGGGTGGTGTCCAAGCGGGCGGCCCAGC...CGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATGCTGGGCCGCCCGCTTaGACACCACCCCACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDAGPPA*TPPHTR Trigger: CCGTGTGTGGGGTGGTGTCCAAGCGGGCGGCCCAGC...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGAGGGAAACGAGAAGGTaGAGCCCAGAGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRWVSQRSLLGGTRGRCVRETRR*SPEASG Trigger: CCCGGATGCCTCTGGGCTTCACCTTCTCGTTTCCCT...CACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | CGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGATGCCTGGTACCACCTaGGGTCAGGGGAGAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRWVSQRSLLGGTRGRCVMPGTT*GQGRVP Trigger: GGGAACTCTCCCCTGACCGCAGGTGGTACCAGGCAT...CACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATTCCGCAGCCTGGGCGTaGCCTTATTGTCCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDSAAWA*PYCPAG Trigger: GCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGA...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGTGGCAGCCACCAGGTTaGCTGATCGGAAGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: WVPALGLPAELAGWNTGAWQPPG*LIGRRR Trigger: TCGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCA...CGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATCGTCTACGCCAACTGTaGTCCGCAGCCTGGGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDRLRQL*SAAWAC Trigger: GCACGCCCAGGCTGCGGACCACAGTTGGCGTAGACG...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCGCTGGGCCGCCCGCTTaGACACCACCCCACACACGG | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGAGPPA*TPPHTR Trigger: CCGTGTGTGGGGTGGTGTCCAAGCGGGCGGCCCAGC...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCCTGTGGTCCGCAGCCTaGGCGTGCCCTTATTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVLWSAA*ACPYCP Trigger: GGGACAATAAGGGCACGCCCAGGCTGCGGACCACAG...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGCACCCCATTCCATATTaGTGCACATCTGGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVPALGLPAELAGWNTGAHPIPY*CTSGPG Trigger: ACCAGGGCCAGATGTGCATCAATATGGAATGGGGTG...CGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATCCCCACACACGGTCTTaGCCAGGATACTGTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDPHTRS*PGYCRR Trigger: GCGACGACAGTATCCTGGTCAAGACCGTGTGTGGGG...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTCGGCTCCCTTGCCACTaGCACTCTCCGAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSRLPCH*HSPRGG Trigger: TCCTCCTCTCGGAGAGTGGCAGTGGCAAGGGAGCCG...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGTCATCCCCGGTGCCCTaGATGATTTCCAGGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWSSPVP*MISRGM Trigger: CATTCCCCTGGAAATCATGCAGGGCACCGGGGATGA...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCCGGCCCCCTTGCCGCTaGCGTCTTCAGACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGRPPCR*RLQTGG Trigger: TCCTCCTGTCTGAAGACGGCAGCGGCAAGGGGGCCG...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGGCAGGCGGTTCAAGATaGCACCGAGCGTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLALQATPLWAGVRQCLAGGSR*HRAWQP Trigger: TGGCTGCCACGCTCGGTGCCATCTTGAACCGCCTGC...CAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCCGTCTACGCCAACTGTaGTCCGCAGCCTGGGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGRLRQL*SAAWAC Trigger: GCACGCCCAGGCTGCGGACCACAGTTGGCGTAGACG...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCCCACAGCGGTCACCATaGCGGCTCCCTTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGPQRSP*RLPCHC Trigger: GCAGTGGCAAGGGAGCCGCCATGGTGACCGCTGTGG...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGCTTTATTCAGCAGCTTaGCCACATCCGCCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWLYSAA*PHPPLP Trigger: TGGAAGGGGCGGATGTGGTCAAGCTGCTGAATAAAG...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTGATACGCAGTCATCGTaGGACGGCTCCACTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSDTQSS*DGSTPR Trigger: CCTGGGAGTGGAGCCGTCTCACGATGACTGCGTATC...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTTGCCCACGGTGTCGTTaGCCACAGCCACCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSCPRCR*PQPPHP Trigger: TGGATGTGGTGGCTGTGGTCAACGACACCGTGGGCA...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCGGCCCCCTTGCCGCTaGCGTCTTCAGACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGRPPCR*RLQTGG Trigger: TCCTCCTGTCTGAAGACGGCAGCGGCAAGGGGGCCG...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTTGACGGAGGCCGTTaGGTTATAATCCCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLRQSGCRRWVSQRSLLDGGR*VIIPGE Trigger: CTCTCCCGGGATTATAACCCAACGGCCTCCGTCAAG...CAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGCCTCGTGAGCAGCTCTaGAGTAATGCGCCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRWVSQRSLLGGTRGRCVPREQL*SNAPFK Trigger: TTTGAAGGGCGCATTACTCCAGAGCTGCTCACGAGG...CACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGCCTTCCTTATCCCTGTaGGTGTCTTGTGTGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWPSLSL*VSCVHL Trigger: GAGGTGCACACAAGACACCCACAGGGATAAGGAAGG...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGAGATGGCACCGAGCGTaGCAGCCACCAGGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGNSSAMFTLALQATPLRWHRA*QPPGWL Trigger: CAGCCAACCTGGTGGCTGCCACGCTCGGTGCCATCT...CAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCGCAGGCGGTTCAAGATaGCACCGAGCGTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGAGGSR*HRAWQP Trigger: TGGCTGCCACGCTCGGTGCCATCTTGAACCGCCTGC...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCCTGTGGTCCGCAGCCTaGGCGTGCCCTTATTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGLWSAA*ACPYCP Trigger: GGGACAATAAGGGCACGCCCAGGCTGCGGACCACAG...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCGTCTACGCCAACTGTaGTCCGCAGCCTGGGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGRLRQL*SAAWAC Trigger: GCACGCCCAGGCTGCGGACCACAGTTGGCGTAGACG...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCCACAGCGGTCACCATaGCGGCTCCCTTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGPQRSP*RLPCHC Trigger: GCAGTGGCAAGGGAGCCGCCATGGTGACCGCTGTGG...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTCCACAGCGGTCACCATaGCGGCTCCCTTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGTAVPCSHSPFRPRPCPQRSP*RLPCHC Trigger: GCAGTGGCAAGGGAGCCGCCATGGTGACCGCTGTGG...ACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGAGGATGGCCCGCACCTaGAGCAGCGCTAATCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLALQATPLWAGVRQCLRMART*SSANRS Trigger: TGACCGATTAGCGCTGCTCCAGGTGCGGGCCATCCT...CAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACCCAGCTGCTGAAGGATaGCCCGCACCTGGAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QGGGREQQCHVHTRPSGHPAAEG*PAPGAA Trigger: CGCTGCTCCAGGTGCGGGCCATCCTTCAGCAGCTGG...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLRQSGCRRWVSQRSLRSLSI*ERNLVS Trigger: CGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...CAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTCGTCGGTTCTAGAGAGGAGTGCTGGAAGGGTGGCGGGCTGGGGGCTGGGTCATCCCCGGTGCCCTaGATGATTTCCAGGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VVVGSREECWKGGGLGAGSSPVP*MISRGM Trigger: CATTCCCCTGGAAATCATGCAGGGCACCGGGGATGA...CCCAGCCCCCAGCCCGCCACCCTTCCAGCACTCCTCTCTAGAACCGACGACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGCAATCTAGGCTCGTCTaGTTGCAGGGAAACGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWQSRLV*LQGNEK Trigger: CTTCTCGTTTCCCTGCAAGCAGACGAGCCTAGATTG...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGAGATGGCACCGAGCGTaGCAGCCACCAGGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGRWHRA*QPPGWL Trigger: CAGCCAACCTGGTGGCTGCCACGCTCGGTGCCATCT...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACAGGGAAACGAGAAGGTaGAGCCCAGAGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGGREQQCHVHTRPSGHRETRR*SPEASG Trigger: CCCGGATGCCTCTGGGCTTCACCTTCTCGTTTCCCT...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATCACCCCATTCCATATTaGTGCACATCTGGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDHPIPY*CTSGPG Trigger: ACCAGGGCCAGATGTGCATCAATATGGAATGGGGTG...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGCACGGTACACTTTGGTaGCAGTTCCTTCACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRWVSQRSLLGGTRGRCVHGTLW*QFLHCL Trigger: CAAACAGTGAAGGAACTGTCACCAAAGTGTACCGTG...CACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGCGGCTCCCTTGCCACTaGCACTCTCCGAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVRLPCH*HSPRGG Trigger: TCCTCCTCTCGGAGAGTGGCAGTGGCAAGGGAGCCG...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGCCAGGAAGTCGGAGATaGAGGAGACAATGTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWPGSRR*RRQCDQ Trigger: TTGATCACATTGTCTCCTGCATCTCCGACTTCCTGG...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGTGCACGATGTTCTCTaGGGTGTCGTAGACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVVHDVL*GVVDLR Trigger: TCTGAGGTCTACGACACCCCAGAGAACATCGTGCAC...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTCGTCGGTTCTAGAGAGGAGTGCTGGAAGGGTGGCGGGCTGGGGGCTGGGCCTCGTGAGCAGCTCTaGAGTAATGCGCCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVGSREECWKGGGLGAGPREQL*SNAPFK Trigger: TTTGAAGGGCGCATTACTCCAGAGCTGCTCACGAGG...CCCAGCCCCCAGCCCGCCACCCTTCCAGCACTCCTCTCTAGAACCGACGACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGCAGGCGGTTCAAGATaGCACCGAGCGTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRAGGSR*HRAWQP Trigger: TGGCTGCCACGCTCGGTGCCATCTTGAACCGCCTGC...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGACTGTGGTCCGCAGCCTaGGCGTGCCCTTATTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRLWSAA*ACPYCP Trigger: GGGACAATAAGGGCACGCCCAGGCTGCGGACCACAG...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTCGTCGGTTCTAGAGAGGAGTGCTGGAAGGGTGGCGGGCTGGGGGCTGGGCCGCCGGGAATACTGTaGGTGCATCTTGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVVGSREECWKGGGLGAGPPGIL*VHLVER Trigger: TCTCTCTACAAGATGCACCCACAGTATTCCCGGCGG...CCCAGCCCCCAGCCCGCCACCCTTCCAGCACTCCTCTCTAGAACCGACGACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCTGTTTCCCAGGGTTaGGGGATCCCCGGTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QGGGREQQCHVHTRPSGHAVSQG*GIPGLT Trigger: AGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGC...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGATCCCTTTGTCCACGTaGTCAAGATTCCGCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWIPLST*SRFRNL Trigger: TAGATTGCGGAATCTTGATCACGTGGACAAAGGGAT...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGCATCCTTCAGCTCGGTaGAGTAATATGCCAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRWVSQRSLLGGTRGRCVHPSAR*SNMPVV Trigger: AACTACTGGCATATTACTTCACCGAGCTGAAGGATG...CACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACTGGCTTCCACTGCCGTaGACGATGTTCTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGGGREQQCHVHTRPSGHWLPLP*TMFSGV Trigger: CACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCA...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSKAGFH*RARCSL Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGACCTCCATCAGTGCCTaGTTGCTGAGGCGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGTSISA*LLRRKW Trigger: CCACTTCCGCCTCAGCAAGCAGGCACTGATGGAGGT...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGATAAGAGGCTTTCCTTaGCCATCTTCACCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCGRVGAGAGSPSGACWIRGFP*PSSPGS Trigger: TGATCCTGGTGAAGATGGCCAAGGAAAGCCTCTTAT...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | GGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTTGGCAGCCACCAGGTTaGCTGATCGGAAGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: GHAPVGRSPAVSAGDNTLWQPPG*LIGRRR Trigger: TCGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCA...AAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGAGGATGGCCCGCACCTaGAGCAGCGCTAATCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVRMART*SSANRS Trigger: TGACCGATTAGCGCTGCTCCAGGTGCGGGCCATCCT...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | TGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGAGTTCCTTCACTGTTTaGTGCATGATTCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVPALGLPAELAGWNTGASSFTV*CMILEK Trigger: CTTCTCCAGAATCATGCACCAAACAGTGAAGGAACT...CGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | TTCCTCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGATTTCCTTGGCATTTTaGACGCCTTCCTTATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLRQSGCRRWVSQRSLISLAF*TPSLSL Trigger: CAGGGATAAGGAAGGCGTTCAAAATGCCAAGGAAAT...CAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGCACCCCATTCCATATTaGTGCACATCTGGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGNSSAMFTLALQATPLHPIPY*CTSGPG Trigger: ACCAGGGCCAGATGTGCATCAATATGGAATGGGGTG...CAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACAGATGCCTCGGGTCTTaGGTGGCTCAGAGATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGGGREQQCHVHTRPSGHRCLGS*VAQRSV Trigger: GACAGATCTCTGAGCCACTCAAGACCCGAGGCATCT...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGACCTCCATCAGTGCCTaGTTGCTGAGGCGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: REATPQMGLEGPRRQSKRTSISA*LLRRKW Trigger: CCACTTCCGCCTCAGCAAGCAGGCACTGATGGAGGT...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGCCTCGTGAGCAGCTCTaGAGTAATGCGCCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEGNSSAMFTLALQATPLPREQL*SNAPFK Trigger: TTTGAAGGGCGCATTACTCCAGAGCTGCTCACGAGG...CAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGCGCCTCAGGGTCTTGTaGAACCGCCGGGAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: REATPQMGLEGPRRQSKRRLRVL*NRREYC Trigger: ACAGTATTCCCGGCGGTTCCACAAGACCCTGAGGCG...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| 3UTR CAA 72 bp | GACTGGCTCCACGGACGGACAGACAACTCAGTGGCATaGATACATCCAAATGGGATGGCAGGCTGCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DWLHGRTDNSVA*IHPNGMAGCGG Trigger: CCCGCCGCAGCCTGCCATCCCATTTGGATGTATCAATGCCACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATATTTCCTTGGCATTTTaGACGCCTTCCTTATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDISLAF*TPSLSL Trigger: CAGGGATAAGGAAGGCGTTCAAAATGCCAAGGAAAT...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGCCCTTGCCCTGCCCACGGTGTCGTTaGCCACAGCCACCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QESIKPLAWLSPYAKPLPCPRCR*PQPPHP Trigger: TGGATGTGGTGGCTGTGGTCAACGACACCGTGGGCA...GGGCAAGGGCTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAAGATGCCTCGGGTCTTaGGTGGCTCAGAGATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRRCLGS*VAQRSV Trigger: GACAGATCTCTGAGCCACTCAAGACCCGAGGCATCT...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCACCCAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGCCCCACACACGGTCTTaGCCAGGATACTGTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTQESIKPLAWLSPYAKPHTRS*PGYCRR Trigger: GCGACGACAGTATCCTGGTCAAGACCGTGTGTGGGG...CTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTGGGTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTCACGGTACACTTTGGTaGCAGTTCCTTCACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSHGTLW*QFLHCL Trigger: CAAACAGTGAAGGAACTGTCACCAAAGTGTACCGTG...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTTGTGGGTGTCTTGTGTaGACCTCATATATGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSCGCLV*TSYMPG Trigger: ACCAGGCATATATGAGGTGCACACAAGACACCCACA...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGTCATCCCCGGTGCCCTaGATGATTTCCAGGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: REATPQMGLEGPRRQSKRSSPVP*MISRGM Trigger: CATTCCCCTGGAAATCATGCAGGGCACCGGGGATGA...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGCTTGACGGAGGCCGTTaGGTTATAATCCCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVLDGGR*VIIPGE Trigger: CTCTCCCGGGATTATAACCCAACGGCCTCCGTCAAG...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGGTCAAGATTTCCTTaGCATTTTGAACGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVGSRFP*HFERLP Trigger: AGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCC...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGTCCATGCTGACGTTCTaGCTCTTCTCGTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVSMLTF*LFSWFT Trigger: GGTGAACCACGAGAAGAGTCAGAACGTCAGCATGGA...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGGGAAGGAGACGATCGTaGATACGTGCTGGACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: REATPQMGLEGPRRQSKRGRRRS*IRAGPI Trigger: TATCGGTCCAGCACGTATGCACGATCGTCTCCTTCC...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGGGAAGGAGACGATCGTaGATACGTGCTGGACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVGRRRS*IRAGPI Trigger: TATCGGTCCAGCACGTATGCACGATCGTCTCCTTCC...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTTCCGCAGCCTGGGCGTaGCCTTATTGTCCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSSAAWA*PYCPAG Trigger: GCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGA...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAATCTAGGCTCGTCTaGTTGCAGGGAAACGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGQSRLV*LQGNEK Trigger: CTTCTCGTTTCCCTGCAAGCAGACGAGCCTAGATTG...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTGGGTCAAGATTTCCTTaGCATTTTGAACGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSGSRFP*HFERLP Trigger: AGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCC...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGGGGTCAAGATTTCCTTaGCATTTTGAACGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLALQATPLWAGVRQCLGSRFP*HFERLP Trigger: AGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCC...CAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGCCGCCGGGAATACTGTaGGTGCATCTTGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVPPGIL*VHLVER Trigger: TCTCTCTACAAGATGCACCCACAGTATTCCCGGCGG...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCACCATATGCTAAGCCCTTGCCCCCACCCCAAGGAAACACCACTCCGACTCGCCTCAGGGTCTTGTaGAACCGCCGGGAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPYAKPLPPPQGNTTPTRLRVL*NRREYC Trigger: ACAGTATTCCCGGCGGTTCCACAAGACCCTGAGGCG...AGTCGGAGTGGTGTTTCCTTGGGGTGGGGGCAAGGGCTTAGCATATGGTGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR TCA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCATCCCTTTGTCCACGTaGTCAAGATTCCGCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: REQQCHVHTRPSGHAPVGIPLST*SRFRNL Trigger: TAGATTGCGGAATCTTGATCACGTGGACAAAGGGAT...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAATCCGCAGCCTGGGCGTaGCCTTATTGTCCCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YRHTWGALKLSPHPGVHKSAAWA*PYCPAG Trigger: GCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGA...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CCA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAACCAGCTGCTGAAGGATaGCCCGCACCTGGAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YRHTWGALKLSPHPGVHKPAAEG*PAPGAA Trigger: CGCTGCTCCAGGTGCGGGCCATCCTTCAGCAGCTGG...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| 3UTR CAA 72 bp | ACGTTCACGCTTGGGCAATGCATGGCCAGGTCGAACTaGAATCATGCAAAGTGGCAGGGCAGGGATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFTLGQCMARSN*NHAKWQGRDEG Trigger: CCCCTCATCCCTGCCCTGCCACTTTGCATGATTCAAGTTCGACCTGGCCATGCATTGCCCAAGCGTGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCACCCAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGTCCATGCTGACGTTCTaGCTCTTCTCGTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPTQESIKPLAWLSPYAKSMLTF*LFSWFT Trigger: GGTGAACCACGAGAAGAGTCAGAACGTCAGCATGGA...CTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTGGGTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR TCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTGATACGCAGTCATCGTaGGACGGCTCCACTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSDTQSS*DGSTPR Trigger: CCTGGGAGTGGAGCCGTCTCACGATGACTGCGTATC...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGCACGGTACACTTTGGTaGCAGTTCCTTCACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: REATPQMGLEGPRRQSKRHGTLW*QFLHCL Trigger: CAAACAGTGAAGGAACTGTCACCAAAGTGTACCGTG...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCACTTATCAATCTTTTTaGCTTGGTCATCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVTYQSF*LGHPSA Trigger: AGCTGAAGGATGACCAAGTCAAAAAGATTGATAAGT...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR GCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTATGCCTGGTACCACCTaGGGTCAGGGGAGAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSMPGTT*GQGRVP Trigger: GGGAACTCTCCCCTGACCGCAGGTGGTACCAGGCAT...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTAGGGGGTCGTATTTTTaGTTCAACATCTACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGTAVPCSHSPFRPRPCRGSYF*FNIYSL Trigger: CAGGCTGTAGATGTTGAACCAAAAATACGACCCCCT...ACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGAGGGGGTCGTATTTTTaGTTCAACATCTACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGRGSYF*FNIYSL Trigger: CAGGCTGTAGATGTTGAACCAAAAATACGACCCCCT...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGAGATGGCACCGAGCGTaGCAGCCACCAGGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWEIPVMALFCGLVLPSKRWHRA*QPPGWL Trigger: CAGCCAACCTGGTGGCTGCCACGCTCGGTGCCATCT...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTAGGATGGCCCGCACCTaGAGCAGCGCTAATCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKTVNNVARTGSTDGQTTRMART*SSANRS Trigger: TGACCGATTAGCGCTGCTCCAGGTGCGGGCCATCCT...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTCCAGCTGCTGAAGGATaGCCCGCACCTGGAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVPAAEG*PAPGAA Trigger: CGCTGCTCCAGGTGCGGGCCATCCTTCAGCAGCTGG...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGCCCCACACACGGTCTTaGCCAGGATACTGTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RWEIPVMALFCGLVLPSKPHTRS*PGYCRR Trigger: GCGACGACAGTATCCTGGTCAAGACCGTGTGTGGGG...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTTGGCTTCCACTGCCGTaGACGATGTTCTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKTVNNVARTGSTDGQTTWLPLP*TMFSGV Trigger: CACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCA...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTCGGCTCCCTTGCCACTaGCACTCTCCGAGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVRLPCH*HSPRGG Trigger: TCCTCCTCTCGGAGAGTGGCAGTGGCAAGGGAGCCG...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGAGGGTTTCCTCAATCTaGCGGTGCTGCTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWEIPVMALFCGLVLPSKRVSSI*RCCSAR Trigger: CCTGGCCGAGCAGCACCGGCAGATTGAGGAAACCCT...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTCGGCCCCCTTGCCGCTaGCGTCTTCAGACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYDNGSLKRWEIPVMALFRPPCR*RLQTGG Trigger: TCCTCCTGTCTGAAGACGGCAGCGGCAAGGGGGCCG...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACCATCAGAGAGCCGCATaGCATACAGATACTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGGGREQQCHVHTRPSGHHQRAA*HTDTYQ Trigger: TTGATAAGTATCTGTATGCCATGCGGCTCTCTGATG...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCCTTGACGGAGGCCGTTaGGTTATAATCCCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLLDGGR*VIIPGE Trigger: CTCTCCCGGGATTATAACCCAACGGCCTCCGTCAAG...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTAGTTCCTTCACTGTTTaGTGCATGATTCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKGTAVPCSHSPFRPRPCSSFTV*CMILEK Trigger: CTTCTCCAGAATCATGCACCAAACAGTGAAGGAACT...ACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTAGTTCCTTCACTGTTTaGTGCATGATTCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHAPVGRSPAVSAGDNTLSSFTV*CMILEK Trigger: CTTCTCCAGAATCATGCACCAAACAGTGAAGGAACT...AAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTTCAATCTTTTTGACTTaGTCATCCTTCAGCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHAPVGRSPAVSAGDNTLSIFLT*SSFSSV Trigger: CACCGAGCTGAAGGATGACCAAGTCAAAAAGATTGA...AAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR TCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGGCTGTTTCCCAGGGTTaGGGGATCCCCGGTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RWEIPVMALFCGLVLPSKAVSQG*GIPGLT Trigger: AGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGC...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTTGCCCACGGTGTCGTTaGCCACAGCCACCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVCPRCR*PQPPHP Trigger: TGGATGTGGTGGCTGTGGTCAACGACACCGTGGGCA...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCCGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLRSLSI*ERNLVS Trigger: CGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTAGGGTTTCCTCAATCTaGCGGTGCTGCTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVRVSSI*RCCSAR Trigger: CCTGGCCGAGCAGCACCGGCAGATTGAGGAAACCCT...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGACCTCCATCAGTGCCTaGTTGCTGAGGCGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RWEIPVMALFCGLVLPSKTSISA*LLRRKW Trigger: CCACTTCCGCCTCAGCAAGCAGGCACTGATGGAGGT...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGCCCTTGCCCCCAGGAAGTCGGAGATaGAGGAGACAATGTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QESIKPLAWLSPYAKPLPPGSRR*RRQCDQ Trigger: TTGATCACATTGTCTCCTGCATCTCCGACTTCCTGG...GGGCAAGGGCTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCCCTTCCTTATCCCTGTaGGTGTCTTGTGTGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLPSLSL*VSCVHL Trigger: GAGGTGCACACAAGACACCCACAGGGATAAGGAAGG...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | GACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTGGCAGCCACCAGGTTaGCTGATCGGAAGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: DNGSLKRWEIPVMALFCGWQPPG*LIGRRR Trigger: TCGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCA...CCCACAAAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTTCCATGCTGACGTTCTaGCTCTTCTCGTGGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CKTVNNVARTGSTDGQTTSMLTF*LFSWFT Trigger: GGTGAACCACGAGAAGAGTCAGAACGTCAGCATGGA...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTCTTTATTCAGCAGCTTaGCCACATCCGCCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSLYSAA*PHPPLP Trigger: TGGAAGGGGCGGATGTGGTCAAGCTGCTGAATAAAG...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTGATACGCAGTCATCGTaGGACGGCTCCACTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TYDNGSLKRWEIPVMALFDTQSS*DGSTPR Trigger: CCTGGGAGTGGAGCCGTCTCACGATGACTGCGTATC...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTGTGCACGATGTTCTCTaGGGTGTCGTAGACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSVHDVL*GVVDLR Trigger: TCTGAGGTCTACGACACCCCAGAGAACATCGTGCAC...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTCCGCCGGGAATACTGTaGGTGCATCTTGTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSPPGIL*VHLVER Trigger: TCTCTCTACAAGATGCACCCACAGTATTCCCGGCGG...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | GACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGCCCCATTTCCATCTCTaGCCGCAGCTTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DNGSLKRWEIPVMALFCGPHFHL*PQLLLH Trigger: GTGAAGAAGAAGCTGCGGTCAGAGATGGAAATGGGG...CCCACAAAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTAGATGCCTCGGGTCTTaGGTGGCTCAGAGATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVRCLGS*VAQRSV Trigger: GACAGATCTCTGAGCCACTCAAGACCCGAGGCATCT...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGCGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RWEIPVMALFCGLVLPSKRSLSI*ERNLVS Trigger: CGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTGGCTTCCACTGCCGTaGACGATGTTCTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TYDNGSLKRWEIPVMALFWLPLP*TMFSGV Trigger: CACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCA...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTTCTTCCTTTTCTCCATaGAGTCTCCGAGGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSSSFSP*SLRGIQ Trigger: CTGAATGCCTCGGAGACTTCATGGAGAAAAGGAAGA...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR TCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTCTTTATTCAGCAGCTTaGCCACATCCGCCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVLYSAA*PHPPLP Trigger: TGGAAGGGGCGGATGTGGTCAAGCTGCTGAATAAAG...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTCCCCATTTCCATCTCTaGCCGCAGCTTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVPHFHL*PQLLLH Trigger: GTGAAGAAGAAGCTGCGGTCAGAGATGGAAATGGGG...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR GCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGGAAGGAGACGATCGTaGATACGTGCTGGACCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVGRRRS*IRAGPI Trigger: TATCGGTCCAGCACGTATGCACGATCGTCTCCTTCC...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | GACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGCAATCTAGGCTCGTCTaGTTGCAGGGAAACGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DNGSLKRWEIPVMALFCGQSRLV*LQGNEK Trigger: CTTCTCGTTTCCCTGCAAGCAGACGAGCCTAGATTG...CCCACAAAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTGCACGATGTTCTCTaGGGTGTCGTAGACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVVHDVL*GVVDLR Trigger: TCTGAGGTCTACGACACCCCAGAGAACATCGTGCAC...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | CACCACCATCACGAGACAAAACAAAATGCAAGACTGTCAATAATGTGGCTAGGAGCTGTTTCCCAGGGTTaGGGGATCCCCGGTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: HHHHETKQNARLSIMWLGAVSQG*GIPGLT Trigger: AGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGC...TCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGAAGGGAAACGAGAAGGTaGAGCCCAGAGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGRETRR*SPEASG Trigger: CCCGGATGCCTCTGGGCTTCACCTTCTCGTTTCCCT...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYDNGSLKRWEIPVMALFKAGFH*RARCSL Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGAAGGGTTTCCTCAATCTaGCGGTGCTGCTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGRVSSI*RCCSAR Trigger: CCTGGCCGAGCAGCACCGGCAGATTGAGGAAACCCT...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | CACCACCATCACGAGACAAAACAAAATGCAAGACTGTCAATAATGTGGCTAGGACGCCTCAGGGTCTTGTaGAACCGCCGGGAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HHHHETKQNARLSIMWLGRLRVL*NRREYC Trigger: ACAGTATTCCCGGCGGTTCCACAAGACCCTGAGGCG...TCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTTCTTCCTTTTCTCCATaGAGTCTCCGAGGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVSSFSP*SLRGIQ Trigger: CTGAATGCCTCGGAGACTTCATGGAGAAAAGGAAGA...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTATTTCCTTGGCATTTTaGACGCCTTCCTTATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CKTVNNVARTGSTDGQTTISLAF*TPSLSV Trigger: AACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAAT...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| CDS-3UTR CCA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTCATCAGAGAGCCGCATaGCATACAGATACTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSHQRAA*HTDTYQ Trigger: TTGATAAGTATCTGTATGCCATGCGGCTCTCTGATG...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAACATCAGAGAGCCGCATaGCATACAGATACTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: YRHTWGALKLSPHPGVHKHQRAA*HTDTYQ Trigger: TTGATAAGTATCTGTATGCCATGCGGCTCTCTGATG...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| CDS-3UTR CCA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTATAAGAGGCTTTCCTTaGCCATCTTCACCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVIRGFP*PSSPGS Trigger: TGATCCTGGTGAAGATGGCCAAGGAAAGCCTCTTAT...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CCA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTATAAGAGGCTTTCCTTaGCCATCTTCACCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVIRGFP*PSSPGS Trigger: TGATCCTGGTGAAGATGGCCAAGGAAAGCCTCTTAT...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGACCCCATTTCCATCTCTaGCCGCAGCTTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGPHFHL*PQLLLH Trigger: GTGAAGAAGAAGCTGCGGTCAGAGATGGAAATGGGG...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | CACCACCATCACGAGACAAAACAAAATGCAAGACTGTCAATAATGTGGCTAGGACCAGGAAGTCGGAGATaGAGGAGACAATGTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HHHHETKQNARLSIMWLGPGSRR*RRQCDQ Trigger: TTGATCACATTGTCTCCTGCATCTCCGACTTCCTGG...TCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR GCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGATGTGGGTGTCTTGTGTaGACCTCATATATGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGCGCLV*TSYMPG Trigger: ACCAGGCATATATGAGGTGCACACAAGACACCCACA...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
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| CDS-3UTR TCA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGAATCCCTTTGTCCACGTaGTCAAGATTCCGCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGIPLST*SRFRNL Trigger: TAGATTGCGGAATCTTGATCACGTGGACAAAGGGAT...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGAGGCGCCTCAGGGTCTaGTGGAACCGCCGGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SLCGRVGAGAGSPSGACWRRLRV*WNRREY Trigger: GTATTCCCGGCGGTTCCACAAGACCCTGAGGCGCCT...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | GTGGTCGTCGGTTCTAGAGAGGAGTGCTGGAAGGGTGGCGGGCTGGGGGCTGGGATAAGGGCGGCCCCCTaGCCGCTGCCGTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VVVGSREECWKGGGLGAGIRAAP*PLPSSD Trigger: GTCTGAAGACGGCAGCGGCAAGGGGGCCGCCCTTAT...CCCAGCCCCCAGCCCGCCACCCTTCCAGCACTCCTCTCTAGAACCGACGACCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGCTTTATTCAGCAGCTaGACCACATCCGCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLCGRVGAGAGSPSGACWALFSS*TTSAPS Trigger: GGAAGGGGCGGATGTGGTCAAGCTGCTGAATAAAGC...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGACACAGTCGGTGGCTTaGAATCCCTTTGTCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: WVPALGLPAELAGWNTGATQSVA*NPFVHV Trigger: CACGTGGACAAAGGGATTCAAAGCCACCGACTGTGT...CGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS CCA 90 bp | TCCGCAGCCTGGGCGTGCCCTTATTGTCCCGCAGGCGGTTCAAGATaGCACCGAGCGTGGCAGCCACCAGGTTGGCTGATCGGAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SAAWACPYCPAGGSR*HRAWQPPGWLIGRR Trigger: TCTCCTTCCGATCAGCCAACCTGGTGGCTGCCACGCTCGGTGCCATCTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS-3UTR CAA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATGCCGACTTCACACTGTaGGTCATCGTAGCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDADFTL*VIVAAG Trigger: ACCTGCGGCTACGATGACCAACAGTGTGAAGTCGGC...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGACACAGTCGGTGGCTTaGAATCCCTTTGTCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCGRVGAGAGSPSGACWTQSVA*NPFVHV Trigger: CACGTGGACAAAGGGATTCAAAGCCACCGACTGTGT...CCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGAAGATGCCTCGGGTCTaGAGTGGCTCAGAGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRWVSQRSLLGGTRGRCVKMPRV*SGSEIC Trigger: ACAGATCTCTGAGCCACTCAAGACCCGAGGCATCTT...CACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATACCCCACACACGGTCTaGACCAGGATACTGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDTPHTV*TRILSS Trigger: CGACGACAGTATCCTGGTCAAGACCGTGTGTGGGGT...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGGGGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGTGGCAGCCACCAGGTaGGCTGATCGGAAGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: QGGGREQQCHVHTRPSGHVAATR*ADRKET Trigger: CGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCAC...GTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCCCCTCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTCGTCGGTTCTAGAGAGGAGTGCTGGAAGGGTGGCGGGCTGGGGGCTGGGTCTAGGCTCGTCTGCTaGCAGGGAAACGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVVGSREECWKGGGLGAGSRLVC*QGNEKV Trigger: CACCTTCTCGTTTCCCTGCAAGCAGACGAGCCTAGA...CCCAGCCCCCAGCCCGCCACCCTTCCAGCACTCCTCTCTAGAACCGACGACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTGTGCCCACGGTGTCGTaGACCACAGCCACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: GHAPVGRSPAVSAGDNTLVPTVS*TTATTS Trigger: GGATGTGGTGGCTGTGGTCAACGACACCGTGGGCAC...AAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTGCTTTATTCAGCAGCTaGACCACATCCGCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSALFSS*TTSAPS Trigger: GGAAGGGGCGGATGTGGTCAAGCTGCTGAATAAAGC...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS CCA 90 bp | AGCTTCTTCTTCACCTCCATCAGTGCCTGCTTGCTGAGGCGGAAGTaGGACAGGGTTTCCTCAATCTGCCGGTGCTGCTCGGCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SFFFTSISACLLRRK*DRVSSICRCCSARR Trigger: CCGCCTGGCCGAGCAGCACCGGCAGATTGAGGAAACCCTGTCCCACTTCCGCCTCAGCAAGCAGGCACTGATGGAGGTGAAGAAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS-3UTR CAA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCGCTTTATTCAGCAGCTaGACCACATCCGCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: REQQCHVHTRPSGHAPVGALFSS*TTSAPS Trigger: GGAAGGGGCGGATGTGGTCAAGCTGCTGAATAAAGC...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGAGCTGTTTCCCAGGGTaGAGGGATCCCCGGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGSCFPG*RDPRSN Trigger: GTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCT...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCGCACCCCATTCCATATaGATGCACATCTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: REQQCHVHTRPSGHAPVGAPHSI*MHIWPW Trigger: CCAGGGCCAGATGTGCATCAATATGGAATGGGGTGC...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGACCCCACACACGGTCTaGACCAGGATACTGTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGTPHTV*TRILSS Trigger: CGACGACAGTATCCTGGTCAAGACCGTGTGTGGGGT...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCAGGACACGGTACACTTaGGTGACAGTTCCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVRTRYT*VTVPSL Trigger: CAGTGAAGGAACTGTCACCAAAGTGTACCGTGTCCT...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGGTAATTTCTTGTCCTaGATCTTCCTTTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WVPALGLPAELAGWNTGAGNFLS*IFLFSM Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAATTACC...CGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGGCCGACTTCACACTGTaGGTCATCGTAGCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: REATPQMGLEGPRRQSKRADFTL*VIVAAG Trigger: ACCTGCGGCTACGATGACCAACAGTGTGAAGTCGGC...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAAGCTGTTTCCCAGGGTaGAGGGATCCCCGGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRSCFPG*RDPRSN Trigger: GTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCT...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACCCAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGGTGGCAGCCACCAGGTaGGCTGATCGGAAGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LPTQESIKPLAWLSPYAKVAATR*ADRKET Trigger: CGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCAC...CTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTGGGTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGCCCTTGCCCGTGCCCACGGTGTCGTaGACCACAGCCACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QESIKPLAWLSPYAKPLPVPTVS*TTATTS Trigger: GGATGTGGTGGCTGTGGTCAACGACACCGTGGGCAC...GGGCAAGGGCTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| CDS-3UTR CAA 90 bp | TTCCTCCCTCTGCGGCAGAGTGGGTGCCGGCGCTGGGTCTCCCAGCGGAGCTTGTATTCGTCCACCACTTaGTCGAAGTCTGTTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLPLRQSGCRRWVSQRSLYSSTT*SKSVLM Trigger: CATCAGAACAGACTTCGACAAAGTGGTGGACGAATA...CAAGCTCCGCTGGGAGACCCAGCGCCGGCACCCACTCTGCCGCAGAGGGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS TCA 90 bp | TTGACCAGGATACTGTCGTCGCACGTGCTGTTTAGACCCAGCTGCTaGAGGATGGCCCGCACCTGGAGCAGCGCTAATCGGTCACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LTRILSSHVLFRPSC*RMARTWSSANRSLS Trigger: CGAGAGTGACCGATTAGCGCTGCTCCAGGTGCGGGCCATCCTTCAGCAGCTGGGTCTAAACAGCACGTGCGACGACAGTATCCTGGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCCCCACGGGTAATTTCTaGTCCTTGATCTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVPTGNF*SLIFLF Trigger: GAAAAGGAAGATCAAGGACAAGAAATTACCCGTGGG...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGGCACCCCATTCCATATaGATGCACATCTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: REATPQMGLEGPRRQSKRAPHSI*MHIWPW Trigger: CCAGGGCCAGATGTGCATCAATATGGAATGGGGTGC...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCAAGAGGAAGCCTTTCTaGGTGAAGTCAATCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVKRKPF*VKSIRM Trigger: CATCCTGATTGACTTCACCAAGAAAGGCTTCCTCTT...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTCTCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCCAGTTCCTTCACTGTTaGGTGCATGATTCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVSQRSLLGGTRGRCVVVQFLHC*VHDSGE Trigger: TTCTCCAGAATCATGCACCAAACAGTGAAGGAACTG...GACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGAGACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS TCA 90 bp | GCACCCGCAGGATTCGAAAGGAAGACCCGCCGAGATCCAGTGCAATaGAATCCCCCTTTTCTGAGCCGTCCGGAATGGACCGGACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: APAGFERKTRRDPVQ*NPPFLSRPEWTGQR Trigger: CCTTTGTCCGGTCCATTCCGGACGGCTCAGAAAAGGGGGATTTCATTGCACTGGATCTCGGCGGGTCTTCCTTTCGAATCCTGCGGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAAGCCCCTAGCGTGGCTGCCGACTTCACACTGTaGGTCATCGTAGCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GALKLSPHPGVHKAPSVAADFTL*VIVAAG Trigger: ACCTGCGGCTACGATGACCAACAGTGTGAAGTCGGC...AGCCACGCTAGGGGCTTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| CDS-3UTR CAA 90 bp | AGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGCAATAAGAGGCTTTCCTaGGCCATCTTCACCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: REQQCHVHTRPSGHAPVGNKRLS*AIFTRI Trigger: GATCCTGGTGAAGATGGCCAAGGAAAGCCTCTTATT...GCCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGATCCCTGTGGGTGTCTaGTGTGCACCTCATATATGC | + |
|
Preference number: 5 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGIPVGV*CAPHIC Trigger: GCATATATGAGGTGCACACAAGACACCCACAGGGAT...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCCTGGGCGTGCCCTTATaGTCCCGCAGGCGGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLLGVPL*SRRRFK Trigger: CTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAG...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TCCCAGCGGAGCTTGCTGGGTGGAACACGGGGGCGGTGTGTGGTCGTCGGTTCTAAGAGGAAGCCTTTCTaGGTGAAGTCAATCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQRSLLGGTRGRCVVVGSKRKPF*VKSIRM Trigger: CATCCTGATTGACTTCACCAAGAAAGGCTTCCTCTT...AGAACCGACGACCACACACCGCCCCCGTGTTCCACCCAGCAAGCTCCGCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTATAAGGGCGGCCCCCTaGCCGCTGCCGTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CKTVNNVARTGSTDGQTTIRAAP*PLPSSD Trigger: GTCTGAAGACGGCAGCGGCAAGGGGGCCGCCCTTAT...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | CGCCCTTCAGGCCACGCCCCTGTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATATCAATCTTTTTGACTaGGTCATCCTTCAGCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSGHAPVGRSPAVSAGDINLFD*VILQLG Trigger: ACCGAGCTGAAGGATGACCAAGTCAAAAAGATTGAT...ATCACCAGCAGACACTGCCGGACTCCTGCCCACAGGGGCGTGGCCTGAAGGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
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| CDS-3UTR CAA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTAGGCGCCTCAGGGTCTaGTGGAACCGCCGGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSRRLRV*WNRREY Trigger: GTATTCCCGGCGGTTCCACAAGACCCTGAGGCGCCT...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAAGGACACGGTACACTTaGGTGACAGTTCCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRRTRYT*VTVPSL Trigger: CAGTGAAGGAACTGTCACCAAAGTGTACCGTGTCCT...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | GTGGGCAGGAGTCCGGCAGTGTCTGCTGGTGATAACACACTTCACACGGGGGTGAGGACACGGTACACTTaGGTGACAGTTCCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRSPAVSAGDNTLHTGVRTRYT*VTVPSL Trigger: CAGTGAAGGAACTGTCACCAAAGTGTACCGTGTCCT...CACCCCCGTGTGAAGTGTGTTATCACCAGCAGACACTGCCGGACTCCTGCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS GCA 90 bp | AACGCCTTCCTTATCCCTGTGGGTGTCTTGTGTGCACCTCATATATaGCTGGTACCACCTGCGGTCAGGGGAGAGTTCCCATCCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NAFLIPVGVLCAPHI*LVPPAVRGEFPSRF Trigger: GAAACGGGATGGGAACTCTCCCCTGACCGCAGGTGGTACCAGGCATATATGAGGTGCACACAAGACACCCACAGGGATAAGGAAGGCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGGCTCGTCTATTTTGGATaGTCGGCACGGGAAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: REATPQMGLEGPRRQSKRLVYFG*SAREGK Trigger: TTTTCCTTCCCGTGCCGACAATCCAAAATAGACGAG...CCTCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS-3UTR CAA 90 bp | AAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGGTATTCGTCCACCACTTaGTCGAAGTCTGTTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KGTAVPCSHSPFRPRPCGYSSTT*SKSVLM Trigger: CATCAGAACAGACTTCGACAAAGTGGTGGACGAATA...CCCACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCACCATATGCTAAGCCCTTGCCCCCACCCCAAGGAAACACCACTCCGACTAAGATGCCTCGGGTCTaGAGTGGCTCAGAGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPYAKPLPPPQGNTTPTKMPRV*SGSEIC Trigger: ACAGATCTCTGAGCCACTCAAGACCCGAGGCATCTT...AGTCGGAGTGGTGTTTCCTTGGGGTGGGGGCAAGGGCTTAGCATATGGTGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTCAGTTCCTTCACTGTTaGGTGCATGATTCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GKGTAVPCSHSPFRPRPCQFLHC*VHDSGE Trigger: TTCTCCAGAATCATGCACCAAACAGTGAAGGAACTG...ACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
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| CDS CCA 90 bp | CCTTCCTTATCCCTGTGGGTGTCTTGTGTGCACCTCATATATGCCTaGTACCACCTGCGGTCAGGGGAGAGTTCCCATCCCGTTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSLSLWVSCVHLIYA*YHLRSGESSHPVSM Trigger: CATTGAAACGGGATGGGAACTCTCCCCTGACCGCAGGTGGTACCAGGCATATATGAGGTGCACACAAGACACCCACAGGGATAAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAGATTTCCTTGGCATTTaGAACGCCTTCCTTATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRDFLGI*NAFLIP Trigger: AGGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATC...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTGGCAGCCACCAGGTaGGCTGATCGGAAGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVVAATR*ADRKET Trigger: CGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCAC...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTCTGGGCGTGCCCTTATaGTCCCGCAGGCGGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVLGVPL*SRRRFK Trigger: CTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAG...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTCTGGGCGTGCCCTTATaGTCCCGCAGGCGGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVLGVPL*SRRRFK Trigger: CTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAG...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAGGCGACTCCACAGATGGGCTTGGAAGGGCCCAGAAGACAGTCCAAGAAAGAGGAAGCCTTTCTaGGTGAAGTCAATCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GGRRLHRWAWKGPEDSPRKRKPF*VKSIRM Trigger: CATCCTGATTGACTTCACCAAGAAAGGCTTCCTCTT...TCTTGGACTGTCTTCTGGGCCCTTCCAAGCCCATCTGTGGAGTCGCCTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS CCA 90 bp | GACGTGATCAAAAAGCTGGCTTCCACTGCCGTGCACGATGTTCTCTaGGGTGTCGTAGACCTCAGACTCCATGCTGACGTTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DVIKKLASTAVHDVL*GVVDLRLHADVLTL Trigger: AAGAGTCAGAACGTCAGCATGGAGTCTGAGGTCTACGACACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTTTTGATCACGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
||
| CDS CCA 90 bp | TCCTCCGAGATCCAAGGCCAGGAAGTCACCATGCTCAGTCCCATCTaGGATGCTCCGAACATAAGAAGGCAGCATTTTGACCGTAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSEIQGQEVTMLSPI*DAPNIRRQHFDRSS Trigger: AGAGCTACGGTCAAAATGCTGCCTTCTTATGTTCGGAGCATCCCAGATGGGACTGAGCATGGTGACTTCCTGGCCTTGGATCTCGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CCA 90 bp | AGTCATCGTGAGACGGCTCCACTCCCAGGCGGGTCAAGATTTCCTTaGCATTTTGAACGCCTTCCTTATCCGTTTCAATGGCGGCTACGT | + |
|
Preference number: 5 (lower is better) Translates to: SHRETAPLPGGSRFP*HFERLPYPFQWRLR Trigger: ACGTAGCCGCCATTGAAACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCCGCCTGGGAGTGGAGCCGTCTCACGATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGAACAGCAGTGCCATGTTCACACTCGCCCTTCAGGCCACGCCCCTGTGGTAATTTCTTGTCCTaGATCTTCCTTTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GKGTAVPCSHSPFRPRPCGNFLS*IFLFSM Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAATTACC...ACAGGGGCGTGGCCTGAAGGGCGAGTGTGAACATGGCACTGCTGTTCCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACCCAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGAATAAGAGGCTTTCCTaGGCCATCTTCACCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPTQESIKPLAWLSPYAKNKRLS*AIFTRI Trigger: GATCCTGGTGAAGATGGCCAAGGAAAGCCTCTTATT...CTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTGGGTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CAA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTAGGCGCCTCAGGGTCTaGTGGAACCGCCGGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: TYDNGSLKRWEIPVMALFRRLRV*WNRREY Trigger: GTATTCCCGGCGGTTCCACAAGACCCTGAGGCGCCT...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | ACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTGTGCCCACGGTGTCGTaGACCACAGCCACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: TYDNGSLKRWEIPVMALFVPTVS*TTATTS Trigger: GGATGTGGTGGCTGTGGTCAACGACACCGTGGGCAC...AAACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTAGCTGTTTCCCAGGGTaGAGGGATCCCCGGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVSCFPG*RDPRSN Trigger: GTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCT...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGGCACCCCATTCCATATaGATGCACATCTGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWEIPVMALFCGLVLPSKAPHSI*MHIWPW Trigger: CCAGGGCCAGATGTGCATCAATATGGAATGGGGTGC...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTAAGATGCCTCGGGTCTaGAGTGGCTCAGAGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CKTVNNVARTGSTDGQTTKMPRV*SGSEIC Trigger: ACAGATCTCTGAGCCACTCAAGACCCGAGGCATCTT...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS TCA 90 bp | TGTACATGCCGCTCACCATCTTCTCGAACAGCTGTTTCCCAGGGTTaGGGGATCCCCGGTCTAACTCTCTGTCAAACTCTGTTCGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: CTCRSPSSRTAVSQG*GIPGLTLCQTLFEC Trigger: ACATTCGAACAGAGTTTGACAGAGAGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCTGTTCGAGAAGATGGTGAGCGGCATGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS-3UTR CAA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTTCTAGGCTCGTCTGCTaGCAGGGAAACGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVSRLVC*QGNEKV Trigger: CACCTTCTCGTTTCCCTGCAAGCAGACGAGCCTAGA...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS TCA 90 bp | TCCTCTCTCCTTTTTACAGCATCCCTCAGTAAAGTGGCTACATCGTaGCCCACACAGTCGGTGGCTTTGAATCCCTTTGTCCACGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SSLLFTASLSKVATS*PTQSVALNPFVHVI Trigger: GATCACGTGGACAAAGGGATTCAAAGCCACCGACTGTGTGGGTCACGATGTAGCCACTTTACTGAGGGATGCTGTAAAAAGGAGAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS-3UTR CAA 90 bp | AGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTCTCGTCTATTTTGGATaGTCGGCACGGGAAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLSIMWLGLAPRTDRQLSLVYFG*SAREGK Trigger: TTTTCCTTCCCGTGCCGACAATCCAAAATAGACGAG...ACTGAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTGTTACACAGTCGGTGGCTTaGAATCCCTTTGTCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: DIRQWLTKAMGDSSDGVVTQSVA*NPFVHV Trigger: CACGTGGACAAAGGGATTCAAAGCCACCGACTGTGT...AACAACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCTATTCGTCCACCACTTaGTCGAAGTCTGTTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ARLSIMWLGLAPRTDRQLYSSTT*SKSVLM Trigger: CATCAGAACAGACTTCGACAAAGTGGTGGACGAATA...GAGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS TCA 90 bp | CACTGTTTAGAGAATATTCGTCCACCACTTTGTCGAAGTCTGTTCTaGTGTCGTCCAGACAGCCGTTGTCACCAAAGGCACCCCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HCLENIRPPLCRSLF*CRPDSRCHQRHPIP Trigger: TGGAATGGGGTGCCTTTGGTGACAACGGCTGTCTGGACGACATCAGAACAGACTTCGACAAAGTGGTGGACGAATATTCTCTAAACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS-3UTR CAA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGAATAAGAGGCTTTCCTaGGCCATCTTCACCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RWEIPVMALFCGLVLPSKNKRLS*AIFTRI Trigger: GATCCTGGTGAAGATGGCCAAGGAAAGCCTCTTATT...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTGATTTCCTTGGCATTTaGAACGCCTTCCTTATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CKTVNNVARTGSTDGQTTDFLGI*NAFLIP Trigger: AGGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATC...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TGCAAGACTGTCAATAATGTGGCTAGGACTGGCTCCACGGACGGACAGACAACTCAGTTCCTTCACTGTTaGGTGCATGATTCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CKTVNNVARTGSTDGQTTQFLHC*VHDSGE Trigger: TTCTCCAGAATCATGCACCAAACAGTGAAGGAACTG...AGTTGTCTGTCCGTCCGTGGAGCCAGTCCTAGCCACATTATTGACAGTCTTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCCATAAAGCCCCTAGCGTGGCTGTCACCATATGCTAAGCCCTTGCCCTACTTATCAATCTTTTaGACTTGGTCATCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QESIKPLAWLSPYAKPLPYLSIF*TWSSFS Trigger: GCTGAAGGATGACCAAGTCAAAAAGATTGATAAGTA...GGGCAAGGGCTTAGCATATGGTGACAGCCACGCTAGGGGCTTTATGGACTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CAA 90 bp | CGATGGGAGATTCCAGTGATGGCGTTGTTTTGTGGGTTGGTTCTTCCTAGCAAGCCCACGGGTAATTTCTaGTCCTTGATCTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RWEIPVMALFCGLVLPSKPTGNF*SLIFLF Trigger: GAAAAGGAAGATCAAGGACAAGAAATTACCCGTGGG...CTTGCTAGGAAGAACCAACCCACAAAACAACGCCATCACTGGAATCTCCCATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CTAGACATACGACAATGGCTCACTAAAGCGATGGGAGATTCCAGTGATGGCGTTCTCGTCTATTTTGGATaGTCGGCACGGGAAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDIRQWLTKAMGDSSDGVLVYFG*SAREGK Trigger: TTTTCCTTCCCGTGCCGACAATCCAAAATAGACGAG...AACGCCATCACTGGAATCTCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS TCA 90 bp | CCGTTGGGTTATAATCCCGGGAGAGGCCATTCTTCATCTCTTTCTTaGAGCGTGTCAGGATATCTATCAGAATTTCATCAGAGAGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGYNPGRGHSSSLS*SVSGYLSEFHQRAA Trigger: TGCGGCTCTCTGATGAAATTCTGATAGATATCCTGACACGCTTCAAGAAAGAGATGAAGAATGGCCTCTCCCGGGATTATAACCCAACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
||
| CDS-3UTR CAA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGATCTAGGCTCGTCTGCTaGCAGGGAAACGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGSRLVC*QGNEKV Trigger: CACCTTCTCGTTTCCCTGCAAGCAGACGAGCCTAGA...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | TATAGGCATACCTGGGGAGCTTTGAAGCTTTCTCCCCACCCAGGAGTCCATAAAGGTAATTTCTTGTCCTaGATCTTCCTTTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: YRHTWGALKLSPHPGVHKGNFLS*IFLFSM Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAATTACC...TTTATGGACTCCTGGGTGGGGAGAAAGCTTCAAAGCTCCCCAGGTATGCCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS-3UTR CAA 90 bp | GAATCAGTACAAAGTTTACTAGACATACGACAATGGCTCACTAAAGCGATGGGAATCCCTGTGGGTGTCTaGTGTGCACCTCATATATGC | + |
|
Preference number: 5 (lower is better) Translates to: ESVQSLLDIRQWLTKAMGIPVGV*CAPHIC Trigger: GCATATATGAGGTGCACACAAGACACCCACAGGGAT...TCCCATCGCTTTAGTGAGCCATTGTCGTATGTCTAGTAAACTTTGTACTGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS-3UTR CAA 90 bp | CACCACCATCACGAGACAAAACAAAATGCAAGACTGTCAATAATGTGGCTAGGAGATTTCCTTGGCATTTaGAACGCCTTCCTTATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HHHHETKQNARLSIMWLGDFLGI*NAFLIR Trigger: ACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATC...TCCTAGCCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099691.11 |
||
| CDS CAA 90 bp | GAACCGTCTACGCCAACTGTGGTCCGCAGCCTGGGCGTGCCCTTATaGTCCCGCAGGCGGTTCAAGATGGCACCGAGCGTGGCAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: EPSTPTVVRSLGVPL*SRRRFKMAPSVAAT Trigger: GGTGGCTGCCACGCTCGGTGCCATCTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGACCACAGTTGGCGTAGACGGTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CAA 72 bp | ACGCCAACTGTGGTCCGCAGCCTGGGCGTGCCCTTATaGTCCCGCAGGCGGTTCAAGATGGCACCGAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPTVVRSLGVPL*SRRRFKMAPSV Trigger: CACGCTCGGTGCCATCTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGACCACAGTTGGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CCA 72 bp | TGGGCGTGCCCTTATTGTCCCGCAGGCGGTTCAAGATaGCACCGAGCGTGGCAGCCACCAGGTTGGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: WACPYCPAGGSR*HRAWQPPGWLI Trigger: GATCAGCCAACCTGGTGGCTGCCACGCTCGGTGCCATCTTGAACCGCCTGCGGGACAATAAGGGCACGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CAA 72 bp | CGGACGTCCGAGTCAGGCACCAGGCGCCTCAGGGTCTaGTGGAACCGCCGGGAATACTGTGGGTGCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTSESGTRRLRV*WNRREYCGCIL Trigger: CAAGATGCACCCACAGTATTCCCGGCGGTTCCACAAGACCCTGAGGCGCCTGGTGCCTGACTCGGACGTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS GCA 72 bp | GGCACAGGGCTAGTCTCCCCAGCCTGTCCTGGACCATaGAGCATCCTAGAGAGAAGTGGTGCTCCCCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GTGLVSPACPGP*SILERSGAPHP Trigger: GGGATGGGGAGCACCACTTCTCTCTAGGATGCTGCATGGTCCAGGACAGGCTGGGGAGACTAGCCCTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149534.2 |
||
| CDS CCA 72 bp | AGAGAGAACCGTCTACGCCAACTGTGGTCCGCAGCCTaGGCGTGCCCTTATTGTCCCGCAGGCGGTTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RENRLRQLWSAA*ACPYCPAGGSR Trigger: TCTTGAACCGCCTGCGGGACAATAAGGGCACGCCCAGGCTGCGGACCACAGTTGGCGTAGACGGTTCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CCA 72 bp | CCTTTCCGGCACAGGGCTAGTCTCCCCAGCCTGTCCTaGACCATGCAGCATCCTAGAGAGAAGTGGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PFRHRASLPSLS*TMQHPREKWCS Trigger: GGAGCACCACTTCTCTCTAGGATGCTGCATGGTCCAGGACAGGCTGGGGAGACTAGCCCTGTGCCGGAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149534.2 |
||
| CDS CAA 72 bp | CGGTTCAAGATGGCACCGAGCGTGGCAGCCACCAGGTaGGCTGATCGGAAGGAGACGATCGTGCATACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RFKMAPSVAATR*ADRKETIVHTC Trigger: GCACGTATGCACGATCGTCTCCTTCCGATCAGCCAACCTGGTGGCTGCCACGCTCGGTGCCATCTTGAACCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS TCA 72 bp | ATACTGTCGTCGCACGTGCTGTTTAGACCCAGCTGCTaGAGGATGGCCCGCACCTGGAGCAGCGCTAATCGG | + |
|
Preference number: 6 (lower is better) Translates to: ILSSHVLFRPSC*RMARTWSSANR Trigger: CCGATTAGCGCTGCTCCAGGTGCGGGCCATCCTTCAGCAGCTGGGTCTAAACAGCACGTGCGACGACAGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CCA 72 bp | TTCACCTCCATCAGTGCCTGCTTGCTGAGGCGGAAGTaGGACAGGGTTTCCTCAATCTGCCGGTGCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: FTSISACLLRRK*DRVSSICRCCS Trigger: CGAGCAGCACCGGCAGATTGAGGAAACCCTGTCCCACTTCCGCCTCAGCAAGCAGGCACTGATGGAGGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CAA 72 bp | CCCGTTTCAATGGCGGCTACGTCGCTAGTGGTGAACTaGCCCCTCGTGAGCAGCTCTGGAGTAATGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVSMAATSLVVN*PLVSSSGVMRP Trigger: AGGGCGCATTACTCCAGAGCTGCTCACGAGGGGCAAGTTCACCACTAGCGACGTAGCCGCCATTGAAACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
||
| CDS TCA 72 bp | ATCGTGCATACGTGCTGGACCGATACGCAGTCATCGTaGGACGGCTCCACTCCCAGGCGGGTCAAGATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVHTCWTDTQSS*DGSTPRRVKIS Trigger: GGAAATCTTGACCCGCCTGGGAGTGGAGCCGTCTCACGATGACTGCGTATCGGTCCAGCACGTATGCACGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CCA 72 bp | GCGCCTCAGGGTCTTGTGGAACCGCCGGGAATACTGTaGGTGCATCTTGTAGAGAGAACCGTCTACGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: APQGLVEPPGIL*VHLVERTVYAN Trigger: GTTGGCGTAGACGGTTCTCTCTACAAGATGCACCCACAGTATTCCCGGCGGTTCCACAAGACCCTGAGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
||
| CDS CAA 72 bp | TCCGTTTCAATGGCGGCTACGTCGCTAGTGGTGAACTaGCCCCTCGTGAGCAGCTCTGGAGTAATGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSMAATSLVVN*PLVSSSGVMRP Trigger: AGGGCGCATTACTCCAGAGCTGCTCACGAGGGGCAAGTTCACCACTAGCGACGTAGCCGCCATTGAAACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
||
| CDS TCA 72 bp | GGATTCGAAAGGAAGACCCGCCGAGATCCAGTGCAATaGAATCCCCCTTTTCTGAGCCGTCCGGAATGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GFERKTRRDPVQ*NPPFLSRPEWT Trigger: GGTCCATTCCGGACGGCTCAGAAAAGGGGGATTTCATTGCACTGGATCTCGGCGGGTCTTCCTTTCGAATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
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| CDS CCA 72 bp | CCGGACAAAGGTTGGCAGCATCTTGACGGAGGCCGTTaGGTTATAATCCCGGGAGAGGCCATTCTTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: PDKGWQHLDGGR*VIIPGEAILHL Trigger: GAGATGAAGAATGGCCTCTCCCGGGATTATAACCCAACGGCCTCCGTCAAGATGCTGCCAACCTTTGTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
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| CDS CCA 72 bp | GAGACGGCTCCACTCCCAGGCGGGTCAAGATTTCCTTaGCATTTTGAACGCCTTCCTTATCCCTGTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ETAPLPGGSRFP*HFERLPYPCGC Trigger: ACACCCACAGGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCCGCCTGGGAGTGGAGCCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
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| CDS CAA 90 bp | AGTTCCCATCCCGTTTCAATGGCGGCTACGTCGCTAGTGGTGAACTaGCCCCTCGTGAGCAGCTCTGGAGTAATGCGCCCTTCAAATAAG | + |
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Preference number: 6 (lower is better) Translates to: SSHPVSMAATSLVVN*PLVSSSGVMRPSNK Trigger: CTTATTTGAAGGGCGCATTACTCCAGAGCTGCTCACGAGGGGCAAGTTCACCACTAGCGACGTAGCCGCCATTGAAACGGGATGGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072357.14 ENSMUST00000116238.9 |
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| CDS CAA 90 bp | GTGAGACGGCTCCACTCCCAGGCGGGTCAAGATTTCCTTGGCATTTaGAACGCCTTCCTTATCCGTTTCAATGGCGGCTACGTCGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: VRRLHSQAGQDFLGI*NAFLIRFNGGYVAS Trigger: ACTAGCGACGTAGCCGCCATTGAAACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCCGCCTGGGAGTGGAGCCGTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
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| CDS TCA 72 bp | CGCTCACCATCTTCTCGAACAGCTGTTTCCCAGGGTTaGGGGATCCCCGGTCTAACTCTCTGTCAAACTCTG | + |
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Preference number: 6 (lower is better) Translates to: RSPSSRTAVSQG*GIPGLTLCQTL Trigger: CAGAGTTTGACAGAGAGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCTGTTCGAGAAGATGGTGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS CCA 72 bp | AAAAAGCTGGCTTCCACTGCCGTGCACGATGTTCTCTaGGGTGTCGTAGACCTCAGACTCCATGCTGACGTT | + |
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Preference number: 6 (lower is better) Translates to: KKLASTAVHDVL*GVVDLRLHADV Trigger: AACGTCAGCATGGAGTCTGAGGTCTACGACACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
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| CDS CAA 72 bp | TGTCCACGTGATCAGTACGGCCTCGTCTATTTTGGATaGTCGGCACGGGAAGGAAAACGTGAATCCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: CPRDQYGLVYFG*SAREGKRESHG Trigger: CCCGTGGGATTCACGTTTTCCTTCCCGTGCCGACAATCCAAAATAGACGAGGCCGTACTGATCACGTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000143179.2 ENSMUST00000152761.8 |
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| CDS CAA 72 bp | CCGCTCACCATCTTCTCGAACAGCTGTTTCCCAGGGTaGAGGGATCCCCGGTCTAACTCTCTGTCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: PLTIFSNSCFPG*RDPRSNSLSNS Trigger: AGAGTTTGACAGAGAGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCTGTTCGAGAAGATGGTGAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS CAA 90 bp | TTATTCAGCAGCTTGACCACATCCGCCCCTTCCACGCCACTGGCTTaGAACCGCTTTGTCCACGTGATCAGTACGGCCTCGTCTATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFSSLTTSAPSTPLA*NRFVHVISTASSIL Trigger: CAAAATAGACGAGGCCGTACTGATCACGTGGACAAAGCGGTTCAAAGCCAGTGGCGTGGAAGGGGCGGATGTGGTCAAGCTGCTGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
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| CDS CAA 90 bp | CCTTCCTTATCCGTTTCAATGGCGGCTACGTCGCTAGTGGTGAACTaGCCCCTCGTGAGCAGCTCTGGAGTAATGCGCCCTTCAAATAAG | + |
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Preference number: 6 (lower is better) Translates to: PSLSVSMAATSLVVN*PLVSSSGVMRPSNK Trigger: CTTATTTGAAGGGCGCATTACTCCAGAGCTGCTCACGAGGGGCAAGTTCACCACTAGCGACGTAGCCGCCATTGAAACGGATAAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
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| CDS TCA 72 bp | TCCACTCCCAGGCGGGTCAAGATTTCCTTGGCATTTTaGACGCCTTCCTTATCCGTTTCAATGGCGGCTACG | + |
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Preference number: 6 (lower is better) Translates to: STPRRVKISLAF*TPSLSVSMAAT Trigger: CGTAGCCGCCATTGAAACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCCGCCTGGGAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
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| CDS CCA 72 bp | GAGACGGCTCCACTCCCAGGCGGGTCAAGATTTCCTTaGCATTTTGAACGCCTTCCTTATCCGTTTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: ETAPLPGGSRFP*HFERLPYPFQW Trigger: CCATTGAAACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCCGCCTGGGAGTGGAGCCGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
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| CDS CAA 72 bp | CTCCACTCCCAGGCGGGTCAAGATTTCCTTGGCATTTaGAACGCCTTCCTTATCCGTTTCAATGGCGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LHSQAGQDFLGI*NAFLIRFNGGY Trigger: GTAGCCGCCATTGAAACGGATAAGGAAGGCGTTCAAAATGCCAAGGAAATCTTGACCCGCCTGGGAGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099691.11 ENSMUST00000130422.8 |
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| CDS CAA 90 bp | CGGCACGGGAAGGAAAACGTGAATCCCACGGGTAATTTCTTGTCCTaGATCTTCCTTTTCTCCATGAAGTCTCCGAGGCATTCAGCGACG | + |
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Preference number: 6 (lower is better) Translates to: RHGKENVNPTGNFLS*IFLFSMKSPRHSAT Trigger: CGTCGCTGAATGCCTCGGAGACTTCATGGAGAAAAGGAAGATCAAGGACAAGAAATTACCCGTGGGATTCACGTTTTCCTTCCCGTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000143179.2 ENSMUST00000152761.8 |
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| CDS CAA 90 bp | ATGTACATGCCGCTCACCATCTTCTCGAACAGCTGTTTCCCAGGGTaGAGGGATCCCCGGTCTAACTCTCTGTCAAACTCTGTTCGAATG | + |
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Preference number: 6 (lower is better) Translates to: MYMPLTIFSNSCFPG*RDPRSNSLSNSVRM Trigger: CATTCGAACAGAGTTTGACAGAGAGTTAGACCGGGGATCCCTCAACCCTGGGAAACAGCTGTTCGAGAAGATGGTGAGCGGCATGTACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS CCA 72 bp | ATCCAAGGCCAGGAAGTCACCATGCTCAGTCCCATCTaGGATGCTCCGAACATAAGAAGGCAGCATTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: IQGQEVTMLSPI*DAPNIRRQHFD Trigger: GTCAAAATGCTGCCTTCTTATGTTCGGAGCATCCCAGATGGGACTGAGCATGGTGACTTCCTGGCCTTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS TCA 72 bp | GAGAATATTCGTCCACCACTTTGTCGAAGTCTGTTCTaGTGTCGTCCAGACAGCCGTTGTCACCAAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ENIRPPLCRSLF*CRPDSRCHQRH Trigger: GTGCCTTTGGTGACAACGGCTGTCTGGACGACATCAGAACAGACTTCGACAAAGTGGTGGACGAATATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS CAA 90 bp | GATTGTCGGCACGGGAAGGAAAACGTGAATCCCACGGGTAATTTCTaGTCCTTGATCTTCCTTTTCTCCATGAAGTCTCCGAGGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: DCRHGKENVNPTGNF*SLIFLFSMKSPRHS Trigger: TGAATGCCTCGGAGACTTCATGGAGAAAAGGAAGATCAAGGACAAGAAATTACCCGTGGGATTCACGTTTTCCTTCCCGTGCCGACAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000143179.2 ENSMUST00000152761.8 |
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| CDS CAA 72 bp | CACGGGAAGGAAAACGTGAATCCCACGGGTAATTTCTaGTCCTTGATCTTCCTTTTCTCCATGAAGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: HGKENVNPTGNF*SLIFLFSMKSP Trigger: CGGAGACTTCATGGAGAAAAGGAAGATCAAGGACAAGAAATTACCCGTGGGATTCACGTTTTCCTTCCCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000143179.2 ENSMUST00000152761.8 |
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| CDS CAA 72 bp | TGTTTCCCACTGTTTAGAGAATATTCGTCCACCACTTaGTCGAAGTCTGTTCTGATGTCGTCCAGACAGCCG | + |
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Preference number: 6 (lower is better) Translates to: CFPLFREYSSTT*SKSVLMSSRQP Trigger: CGGCTGTCTGGACGACATCAGAACAGACTTCGACAAAGTGGTGGACGAATATTCTCTAAACAGTGGGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS CAA 90 bp | TCAAACCTTTGTTTCCCACTGTTTAGAGAATATTCGTCCACCACTTaGTCGAAGTCTGTTCTGATGTCGTCCAGACAGCCGTTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: SNLCFPLFREYSSTT*SKSVLMSSRQPLSP Trigger: TGGTGACAACGGCTGTCTGGACGACATCAGAACAGACTTCGACAAAGTGGTGGACGAATATTCTCTAAACAGTGGGAAACAAAGGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 |
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| CDS CCA 72 bp | TCAGGATATCTATCAGAATTTCATCAGAGAGCCGCATaGCATACAGATACTTATCAATCCTGGCCTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGYLSEFHQRAA*HTDTYQSWPPR Trigger: CCTGGGAGGCCAGGATTGATAAGTATCTGTATGCCATGCGGCTCTCTGATGAAATTCTGATAGATATCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130422.8 |
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| CDS TCA 72 bp | TATAATCCCGGGAGAGGCCATTCTTCATCTCTTTCTTaGAGCGTGTCAGGATATCTATCAGAATTTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: YNPGRGHSSSLS*SVSGYLSEFHQ Trigger: CTGATGAAATTCTGATAGATATCCTGACACGCTTCAAGAAAGAGATGAAGAATGGCCTCTCCCGGGATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000072357.14 ENSMUST00000099691.11 ENSMUST00000116238.9 ENSMUST00000130422.8 ENSMUST00000139228.8 ENSMUST00000152761.8 |
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| CDS CCA 72 bp | TCAGGATATCTATCAGAATTTCATCAGAGAGCCGCATaGCATACAGATACTTATCAATCTGATCCCAACGCA | + |
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Preference number: 6 (lower is better) Translates to: SGYLSEFHQRAA*HTDTYQSDPNA Trigger: TGCGTTGGGATCAGATTGATAAGTATCTGTATGCCATGCGGCTCTCTGATGAAATTCTGATAGATATCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152761.8 |
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