Pregenerated sensors for HGD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022821Ensembl transcript IDs: ENSMUST00000159787.8, ENSMUST00000160847.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAACACAGATTTATTGAGTAATTTAGGAAGCCATAGGCATTTCTaGATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAG | + |
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Preference number: 1 (lower is better) Translates to: QNTDLLSNLGSHRHF*MHVHKHSEFLDYDK Trigger: CTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTATGGCTTCCTAAATTACTCAATAAATCTGTGTTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| 3UTR TCA 72 bp | CTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTaGGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LISIAVPVASEL*GSQGSYASLFS Trigger: TGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| 3UTR GCA 72 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATaGAAGTCTGTTCTCAATTACAGTAGAGGGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: CSIRAVRISRKL*KSVLNYSRGLQ Trigger: CTGGAGCCCTCTACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACGGCCGTGAGGGGTCATaGCACTGTGCAGGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYGREGS*HCAGCR Trigger: GCGGCAGCCTGCACAGTGCCATGACCCCTCACGGCC...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGTGGACAAGTGAAGGCTaGTCCCGAGAGCTGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSHFNRCPCSIRAVRISRWTSEG*SRELLS Trigger: GCTGAGCAGCTCTCGGGATCAGCCTTCACTTGTCCA...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTGGCCGTGAGGGGTCATaGCACTGTGCAGGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSGREGS*HCAGCR Trigger: GCGGCAGCCTGCACAGTGCCATGACCCCTCACGGCC...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | TGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTGGGGTCATGGCACTGTaGAGGCTGCCGCCCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CMSTNILSFLTMTSELSFGVMAL*RLPPPG Trigger: GCCAGGGGGCGGCAGCCTGCACAGTGCCATGACCCC...AAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGGGGGTCATGGCACTGTaGAGGCTGCCGCCCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSGVMAL*RLPPPG Trigger: GCCAGGGGGCGGCAGCCTGCACAGTGCCATGACCCC...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACCAGGCTGCCGCCCCCTaGCAGGAATCCACCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYQAAAP*QESTLL Trigger: AAGCAAGGTGGATTCCTGCCAGGGGGCGGCAGCCTG...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACTCCTGGAATTGGGGGTaGAGTGGCTCCGGAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYSWNWG*SGSGEA Trigger: AGCCTCTCCGGAGCCACTTCACCCCCAATTCCAGGA...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGCAAAGACATCGACGCTaGATCGCATTCCTCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSHFNRCPCSIRAVRISRQRHRR*IAFLSE Trigger: TTCAGAGAGGAATGCGATTCAGCGTCGATGTCTTTG...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGCAGATTTCATTGGGCTaGAGGGACATCTTGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSHFNRCPCSIRAVRISRQISLG*RDILPN Trigger: GTTTGGCAAGATGTCCCTGCAGCCCAATGAAATCTG...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGCAGGCTGCCGCCCCCTaGCAGGAATCCACCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSQAAAP*QESTLL Trigger: AAGCAAGGTGGATTCCTGCCAGGGGGCGGCAGCCTG...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTCATCCCAGTTGTGAGTaGCATGGCCTTGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSHPSCE*HGLGRW Trigger: CCATCGACCAAGGCCATGTCACTCACAACTGGGATG...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACACTTCATCCCAGTTGTaGGTGACATGGCCTTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYTSSQL*VTWPWS Trigger: CGACCAAGGCCATGTCACTCACAACTGGGATGAAGT...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | TGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAGCCAGCTGTCCTTTaGGCAGGGAACCTGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: CMSTNILSFLTMTSELSFQPAVL*AGNLDS Trigger: GCTGTCCAGGTTCCCTGCCCAAAGGACAGCTGGCTG...AAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159787.8 |
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| CDS-3UTR CCA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATCCAGGATGTAGCCCCTaGTCTCCTCAAAGACATCGA | + |
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Preference number: 4 (lower is better) Translates to: CSIRAVRISRKLCKSVLNPGCSP*SPQRHR Trigger: TCGATGTCTTTGAGGAGACCAGGGGCTACATCCTGG...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATAACTCCCCACCGAGGTaGGAAGATGACAAAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CSIRAVRISRKLCKSVLNNSPPR*EDDKVS Trigger: GCTGACTTTGTCATCTTCCCACCTCGGTGGGGAGTT...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAACTCCCCACCGAGGTaGGAAGATGACAAAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYNSPPR*EDDKVS Trigger: GCTGACTTTGTCATCTTCCCACCTCGGTGGGGAGTT...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTTGGCAGTCAGCACGGTaGAAATGGAAGGATCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSWQSAR*KWKDPH Trigger: ATGCGGATCCTTCCATTTTCACCGTGCTGACTGCCA...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGGGTAATAAGGAGGTCTaGAGGTTTTATCTGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: SSHFNRCPCSIRAVRISRGNKEV*RFYLQL Trigger: GAGTTGCAGATAAAACCTTCAGACCTCCTTATTACC...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACATCCTGGAATTGGGGGTaGAGTGGCTCCGGAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: IGISECMSTNILSFLTMTSWNWG*SGSGEA Trigger: AGCCTCTCCGGAGCCACTTCACCCCCAATTCCAGGA...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATACAGCGAGGATCCTCTaGAGCACACTCATTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: CSIRAVRISRKLCKSVLNTARIL*STLIPK Trigger: TTTGGGAATGAGTGTGCTTCAGAGGATCCTCGCTGT...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACGCTCGAGTTTGGCCTTaGTGGCCTTTTCAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYARVWP*WPFQSS Trigger: ACTGCTTTGAAAAGGCCAGCAAGGCCAAACTCGAGC...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGAGAAGTTTCCCTTTCTaGGGAACAATCAGGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: SSHFNRCPCSIRAVRISRRSFPF*GTIRKS Trigger: GGATTTCCTGATTGTTCCCCAGAAAGGGAAACTTCT...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTGTCAGCTATCCTCTCTaGCTCGAGTTTGGCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSVSYPL*LEFGLA Trigger: AGCAAGGCCAAACTCGAGCCAGAGAGGATAGCTGAC...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | TGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCATCCCAGTTGTGAGTaGCATGGCCTTGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: CMSTNILSFLTMTSELSFHPSCE*HGLGRW Trigger: CCATCGACCAAGGCCATGTCACTCACAACTGGGATG...AAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATCAAAGACATCGACGCTaGATCGCATTCCTCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: CSIRAVRISRKLCKSVLNQRHRR*IAFLSE Trigger: TTCAGAGAGGAATGCGATTCAGCGTCGATGTCTTTG...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTTGTTCCGTGGACAAGTaGAGGCTGATCCCGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GISECMSTNILSFLTMTSCSVDK*RLIPRA Trigger: AGCTCTCGGGATCAGCCTTCACTTGTCCACGGAACA...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACCAGATTTCATTGGGCTaGAGGGACATCTTGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYQISLG*RDILPN Trigger: GTTTGGCAAGATGTCCCTGCAGCCCAATGAAATCTG...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACCACAGTGTAACCACCTaGCACTCGACGATCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYHSVTT*HSTIFI Trigger: TATGAAGATCGTCGAGTGCCAGGTGGTTACACTGTG...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGGCAAACAGCTTGCCCTaGAATTTATTAATCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: SSHFNRCPCSIRAVRISRANSLP*NLLITV Trigger: CACTGTGATTAATAAATTCCAGGGCAAGCTGTTTGC...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTGATTATTCTGTCCTTTaGGCAGGGAACCTGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSDYSVL*AGNLDS Trigger: GCTGTCCAGGTTCCCTGCCCAAAGGACAGAATAATC...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGACTTCATCCCAGTTGTaGGTGACATGGCCTTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSTSSQL*VTWPWS Trigger: CGACCAAGGCCATGTCACTCACAACTGGGATGAAGT...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATCAGGAAATCCCCATCTaGGTTGTAAAAGCACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: CSIRAVRISRKLCKSVLNQEIPI*VVKAPV Trigger: AACAGGTGCTTTTACAACTCAGATGGGGATTTCCTG...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | GCCATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGCATGGCCTTGGTCGATaGACTCAAAGGGTTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: AIGISECMSTNILSFLTMHGLGR*TQRVCE Trigger: CTCACAAACCCTTTGAGTCCATCGACCAAGGCCATG...CATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTAGAAATCTCGAGGATTaGCCAAGCCATTTGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSRNLED*PSHLLR Trigger: TCGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCT...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | GCCATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGCGAGTTTGGCCTTGCTaGCCTTTTCAAAGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: AIGISECMSTNILSFLTMRVWPC*PFQSSL Trigger: CAGACTGCTTTGAAAAGGCCAGCAAGGCCAAACTCG...CATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR TCA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACATGGCAGTCAGCACGGTaGAAATGGAAGGATCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: IGISECMSTNILSFLTMTWQSAR*KWKDPH Trigger: ATGCGGATCCTTCCATTTTCACCGTGCTGACTGCCA...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACGAATCCACCTTGCTTTaGCTCATAGTGACCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYESTLL*LIVTFD Trigger: ATCAAAGGTCACTATGAGGCAAAGCAAGGTGGATTC...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR GCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGGCTCGAGTTTGGCCTTaGTGGCCTTTTCAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSARVWP*WPFQSS Trigger: ACTGCTTTGAAAAGGCCAGCAAGGCCAAACTCGAGC...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTCATGGCCTTGGTCGATaGACTCAAAGGGTTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GISECMSTNILSFLTMTSHGLGR*TQRVCE Trigger: CTCACAAACCCTTTGAGTCCATCGACCAAGGCCATG...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACACCAGGATGTAGCCCCTaGTCTCCTCAAAGACATCGA | + |
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Preference number: 4 (lower is better) Translates to: IGISECMSTNILSFLTMTPGCSP*SPQRHR Trigger: TCGATGTCTTTGAGGAGACCAGGGGCTACATCCTGG...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGCGAGTTTGGCCTTGCTaGCCTTTTCAAAGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSRVWPC*PFQSSL Trigger: CAGACTGCTTTGAAAAGGCCAGCAAGGCCAAACTCG...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAGTCAGCTATCCTCTCTaGCTCGAGTTTGGCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGISECMSTNILSFLTMTVSYPL*LEFGLA Trigger: AGCAAGGCCAAACTCGAGCCAGAGAGGATAGCTGAC...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR GCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACTTACACAGAAAAATGTaGACAGCAAGGCCGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYLHRKM*TARPLL Trigger: TAACAACGGCCTTGCTGTGCACATTTTTCTGTGTAA...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACATCTGAAGGTTTTATCTaGAACTCCCCACCGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGISECMSTNILSFLTMTSEGFI*NSPPRW Trigger: CCACCTCGGTGGGGAGTTGCAGATAAAACCTTCAGA...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATCTTCTCAGACGCTTTTaGAATCTCAAATGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSIRAVRISRKLCKSVLNLLRRF*NLKWFP Trigger: TGGAAACCATTTGAGATTCCAAAAGCGTCTGAGAAG...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTAGCACCTGTTCTCCATaGAGGAGTTACACAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSSTCSP*RSYTEK Trigger: TTTTTCTGTGTAACTCCTCCATGGAGAACAGGTGCT...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACGCAAACAGCTTGCCCTaGAATTTATTAATCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIRAVRISRKLCKSVLNYANSLP*NLLITV Trigger: CACTGTGATTAATAAATTCCAGGGCAAGCTGTTTGC...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR TCA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTCAGGAAATCCCCATCTaGGTTGTAAAAGCACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GISECMSTNILSFLTMTSQEIPI*VVKAPV Trigger: AACAGGTGCTTTTACAACTCAGATGGGGATTTCCTG...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR TCA 90 bp | TGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAAACTCGGTGTAAATaGGAAGTTTCCCTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CMSTNILSFLTMTSELSFQTRCK*EVSLSG Trigger: CCCAGAAAGGGAAACTTCTCATTTACACCGAGTTTG...AAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR TCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGCAAACTCGGTGTAAATaGGAAGTTTCCCTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSQTRCK*EVSLSG Trigger: CCCAGAAAGGGAAACTTCTCATTTACACCGAGTTTG...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTCTTCTCAGACGCTTTTaGAATCTCAAATGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRAVRISRKLCKSVLNYSLLRRF*NLKWFP Trigger: TGGAAACCATTTGAGATTCCAAAAGCGTCTGAGAAG...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGAGCACCTGTTCTCCATaGAGGAGTTACACAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AIGISECMSTNILSFLTMSTCSP*RSYTEK Trigger: TTTTTCTGTGTAACTCCTCCATGGAGAACAGGTGCT...CATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR TCA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGGGTTTGTGAGAAACTaGAGGAAGAATCCTATACAG | + |
|
Preference number: 4 (lower is better) Translates to: GISECMSTNILSFLTMTSGFVRN*RKNPIQ Trigger: CTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCC...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR TCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGGGTAATAAGGAGGTCTaGAGGTTTTATCTGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSGNKEV*RFYLQL Trigger: GAGTTGCAGATAAAACCTTCAGACCTCCTTATTACC...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR GCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGGAATCCACCTTGCTTTaGCTCATAGTGACCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSESTLL*LIVTFD Trigger: ATCAAAGGTCACTATGAGGCAAAGCAAGGTGGATTC...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CCA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTAGAAGTTTCCCTTTCTaGGGAACAATCAGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GISECMSTNILSFLTMTSRSFPF*GTIRKS Trigger: GGATTTCCTGATTGTTCCCCAGAAAGGGAAACTTCT...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR GCA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGTTACACAGAAAAATGTaGACAGCAAGGCCGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: STNILSFLTMTSELSFQSLHRKM*TARPLL Trigger: TAACAACGGCCTTGCTGTGCACATTTTTCTGTGTAA...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS GCA 90 bp | GGCACTGTGCAGGCTGCCGCCCCCTGGCAGGAATCCACCTTGCTTTaGCTCATAGTGACCTTTGATGAGGCCCATGAACTCACTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTVQAAAPWQESTLL*LIVTFDEAHELTHA Trigger: TGCATGAGTGAGTTCATGGGCCTCATCAAAGGTCACTATGAGGCAAAGCAAGGTGGATTCCTGCCAGGGGGCGGCAGCCTGCACAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS TCA 90 bp | ATACAGCCAGCTTCTCTTATTGGTGTTCCGTGGACAAGTGAAGGCTaGTCCCGAGAGCTGCTCAGCGTAGAGGTTGTAGGGGCAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: IQPASLIGVPWTSEG*SRELLSVEVVGADL Trigger: CAGGTCTGCCCCTACAACCTCTACGCTGAGCAGCTCTCGGGATCAGCCTTCACTTGTCCACGGAACACCAATAAGAGAAGCTGGCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
||
| CDS TCA 90 bp | GAATCCTATACAGCCAGCTTCTCTTATTGGTGTTCCGTGGACAAGTaGAGGCTGATCCCGAGAGCTGCTCAGCGTAGAGGTTGTAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESYTASFSYWCSVDK*RLIPRAAQRRGCRG Trigger: GCCCCTACAACCTCTACGCTGAGCAGCTCTCGGGATCAGCCTTCACTTGTCCACGGAACACCAATAAGAGAAGCTGGCTGTATAGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACGTCGGGCTCCTGGAATaGGGGGTGAAGTGGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SIRAVRISRKLCKSVLNYVGLLE*GVKWLR Trigger: CCGGAGCCACTTCACCCCCAATTCCAGGAGCCCGAC...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CCA 90 bp | GACGATCTTCATACCAGGCAACGGGAATCAAGAAATCTCGAGGATTaGCCAAGCCATTTGCTCCGATGGGTCCCAGGTCAGGTAACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DDLHTRQRESRNLED*PSHLLRWVPGQVTQ Trigger: TTGAGTTACCTGACCTGGGACCCATCGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCTTGATTCCCGTTGCCTGGTATGAAGATCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 90 bp | AGTGACATGGCCTTGGTCGATGGACTCAAAGGGTTTGTGAGAAACTaGAGGAAGAATCCTATACAGCCAGCTGTCCTTTGGGCAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SDMALVDGLKGFVRN*RKNPIQPAVLWAGN Trigger: GTTCCCTGCCCAAAGGACAGCTGGCTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCCTTTGAGTCCATCGACCAAGGCCATGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159787.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTCATTTCAATCGCTGTCCCTGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGAAATCTCGAGGATaGGCCAAGCCATTTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSHFNRCPCSIRAVRISRKKSRG*AKPFAP Trigger: CGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCTT...CCTTGAGATCCTCACAGCTCTGATGCTACAGGGACAGCGATTGAAATGAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGTCGGGCTCCTGGAATaGGGGGTGAAGTGGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GISECMSTNILSFLTMTSVGLLE*GVKWLR Trigger: CCGGAGCCACTTCACCCCCAATTCCAGGAGCCCGAC...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS GCA 90 bp | ACTCATGCAGTTCCTGTGGTAATAAGGAGGTCTGAAGGTTTTATCTaGAACTCCCCACCGAGGTGGGAAGATGACAAAGTCAGCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: THAVPVVIRRSEGFI*NSPPRWEDDKVSNS Trigger: GCTATTGCTGACTTTGTCATCTTCCCACCTCGGTGGGGAGTTGCAGATAAAACCTTCAGACCTCCTTATTACCACAGGAACTGCATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | TGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTACAGCCAGCTGTCCTTaGGGCAGGGAACCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CMSTNILSFLTMTSELSFTASCP*GREPGQ Trigger: CTGTCCAGGTTCCCTGCCCAAAGGACAGCTGGCTGT...AAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159787.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATAAACAGCTACAGGTCTaGAGTCCCCACTTGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: CSIRAVRISRKLCKSVLNKQLQV*SPHLVT Trigger: GGTCACCAAGTGGGGACTCAAGACCTGTAGCTGTTT...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 90 bp | AGTGACATGGCCTTGGTCGATGGACTCAAAGGGTTTGTGAGAAACTaGAGGAAGAATCCTATACAGCCAGCTTCTCTTATTGGTGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SDMALVDGLKGFVRN*RKNPIQPASLIGVP Trigger: CGGAACACCAATAAGAGAAGCTGGCTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCCTTTGAGTCCATCGACCAAGGCCATGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | AGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACATGACGCAGATTTCATaGGGCTGCAGGGACATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIRAVRISRKLCKSVLNYMTQIS*GCRDIL Trigger: CAAGATGTCCCTGCAGCCCAATGAAATCTGCGTCAT...GTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTGGAGAGACATCCTGTTaGCAAGCAAACAGCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRAVRISRKLCKSVLNYSGETSC*QANSLP Trigger: GGGCAAGCTGTTTGCTTGCAAACAGGATGTCTCTCC...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTTGCCAGGCCACGACATaGAATGGAGAGACATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IRAVRISRKLCKSVLNYSCQATT*NGETSC Trigger: ACAGGATGTCTCTCCATTCAATGTCGTGGCCTGGCA...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTTGGCAGGAATCCACCTaGCTTTGCCTCATAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: IRAVRISRKLCKSVLNYSWQEST*LCLIVT Trigger: GGTCACTATGAGGCAAAGCAAGGTGGATTCCTGCCA...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | GCCATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGCTCTCTGGCTCGAGTTaGGCCTTGCTGGCCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIGISECMSTNILSFLTMLSGSS*ALLAFS Trigger: TGAAAAGGCCAGCAAGGCCAAACTCGAGCCAGAGAG...CATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CCA 90 bp | AGCAAACAGCTTGCCCTGGAATTTATTAATCACAGTGTAACCACCTaGCACTCGACGATCTTCATACCAGGCAACGGGAATCAAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SKQLALEFINHSVTT*HSTIFIPGNGNQEI Trigger: GATTTCTTGATTCCCGTTGCCTGGTATGAAGATCGTCGAGTGCCAGGTGGTTACACTGTGATTAATAAATTCCAGGGCAAGCTGTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | GCCATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGGTCTTGAGTCCCCACTaGGTGACCGCCAAACTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: AIGISECMSTNILSFLTMVLSPH*VTAKLK Trigger: CTTAAGTTTGGCGGTCACCAAGTGGGGACTCAAGAC...CATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGTGCCAGGCCACGACATaGAATGGAGAGACATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: STNILSFLTMTSELSFQSCQATT*NGETSC Trigger: ACAGGATGTCTCTCCATTCAATGTCGTGGCCTGGCA...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTTGGCAGGAATCCACCTaGCTTTGCCTCATAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GISECMSTNILSFLTMTSWQEST*LCLIVT Trigger: GGTCACTATGAGGCAAAGCAAGGTGGATTCCTGCCA...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACACTCTCTGGCTCGAGTTaGGCCTTGCTGGCCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGISECMSTNILSFLTMTLSGSS*ALLAFS Trigger: TGAAAAGGCCAGCAAGGCCAAACTCGAGCCAGAGAG...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | TCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTCAATCGAAACAGCTACAGGTCTaGAGTCCCCACTTGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: STNILSFLTMTSELSFQSKQLQV*SPHLVT Trigger: GGTCACCAAGTGGGGACTCAAGACCTGTAGCTGTTT...CGATTGAAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | TGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTGAGCTCTCATTTGGATTATTCTGTCCTTaGGGCAGGGAACCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CMSTNILSFLTMTSELSFGLFCP*GREPGQ Trigger: CTGTCCAGGTTCCCTGCCCAAAGGACAGAATAATCC...AAATGAGAGCTCACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTCTTCTCAGACGCTTTaGGAATCTCAAATGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSIRAVRISRKLCKSVLNSSQTL*ESQMVS Trigger: GGAAACCATTTGAGATTCCAAAAGCGTCTGAGAAGA...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTATGACGCAGATTTCATaGGGCTGCAGGGACATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GISECMSTNILSFLTMTSMTQIS*GCRDIL Trigger: CAAGATGTCCCTGCAGCCCAATGAAATCTGCGTCAT...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAAGAAATCTCGAGGATaGGCCAAGCCATTTGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: IGISECMSTNILSFLTMTKKSRG*AKPFAP Trigger: CGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCTT...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | TGTAGCATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTTGCAAGCAAACAGCTaGCCCTGGAATTTATTAATC | + |
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Preference number: 5 (lower is better) Translates to: CSIRAVRISRKLCKSVLNLQANS*PWNLLI Trigger: GATTAATAAATTCCAGGGCAAGCTGTTTGCTTGCAA...ATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGATGCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | ATAGGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGCCAGCTTCTCTTATaGGTGTTCCGTGGACAAGTG | + |
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Preference number: 5 (lower is better) Translates to: IGISECMSTNILSFLTMTSQLLL*VFRGQV Trigger: CACTTGTCCACGGAACACCAATAAGAGAAGCTGGCT...TGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAGCTGTGAGGATCTCAAGGAAGCTATGCAAGTCTGTTCTCAATTACAGTTTGCAAGCAAACAGCTaGCCCTGGAATTTATTAATC | + |
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Preference number: 5 (lower is better) Translates to: IRAVRISRKLCKSVLNYSLQANS*PWNLLI Trigger: GATTAATAAATTCCAGGGCAAGCTGTTTGCTTGCAA...ACTGTAATTGAGAACAGACTTGCATAGCTTCCTTGAGATCCTCACAGCTCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS-3UTR CAA 90 bp | GGCATTTCTGAATGCATGTCCACAAACATTCTGAGTTTCTTGACTATGACAAGTTCTTCTCAGACGCTTTaGGAATCTCAAATGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: GISECMSTNILSFLTMTSSSQTL*ESQMVS Trigger: GGAAACCATTTGAGATTCCAAAAGCGTCTGAGAAGA...ACTTGTCATAGTCAAGAAACTCAGAATGTTTGTGGACATGCATTCAGAAATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 72 bp | GTGCCGTCAGCTATCCTCTCTGGCTCGAGTTTGGCCTaGCTGGCCTTTTCAAAGCAGTCTGCATCGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VPSAILSGSSLA*LAFSKQSASGP Trigger: CGGCCCCGATGCAGACTGCTTTGAAAAGGCCAGCAAGGCCAAACTCGAGCCAGAGAGGATAGCTGACGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS GCA 72 bp | CAGGCTGCCGCCCCCTGGCAGGAATCCACCTTGCTTTaGCTCATAGTGACCTTTGATGAGGCCCATGAACTC | + |
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Preference number: 6 (lower is better) Translates to: QAAAPWQESTLL*LIVTFDEAHEL Trigger: GAGTTCATGGGCCTCATCAAAGGTCACTATGAGGCAAAGCAAGGTGGATTCCTGCCAGGGGGCGGCAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS GCA 72 bp | TGCCGTCAGCTATCCTCTCTGGCTCGAGTTTGGCCTTaGTGGCCTTTTCAAAGCAGTCTGCATCGGGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: CRQLSSLARVWP*WPFQSSLHRGR Trigger: ACGGCCCCGATGCAGACTGCTTTGAAAAGGCCAGCAAGGCCAAACTCGAGCCAGAGAGGATAGCTGACGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 72 bp | ACTGTGCAGGCTGCCGCCCCCTGGCAGGAATCCACCTaGCTTTGCCTCATAGTGACCTTTGATGAGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: TVQAAAPWQEST*LCLIVTFDEAH Trigger: ATGGGCCTCATCAAAGGTCACTATGAGGCAAAGCAAGGTGGATTCCTGCCAGGGGGCGGCAGCCTGCACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 72 bp | GCTTCTCTTATTGGTGTTCCGTGGACAAGTGAAGGCTaGTCCCGAGAGCTGCTCAGCGTAGAGGTTGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: ASLIGVPWTSEG*SRELLSVEVVG Trigger: CCCTACAACCTCTACGCTGAGCAGCTCTCGGGATCAGCCTTCACTTGTCCACGGAACACCAATAAGAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS TCA 72 bp | ACAGCCAGCTTCTCTTATTGGTGTTCCGTGGACAAGTaGAGGCTGATCCCGAGAGCTGCTCAGCGTAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TASFSYWCSVDK*RLIPRAAQRRG Trigger: ACCTCTACGCTGAGCAGCTCTCGGGATCAGCCTTCACTTGTCCACGGAACACCAATAAGAGAAGCTGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS CCA 72 bp | CATACCAGGCAACGGGAATCAAGAAATCTCGAGGATTaGCCAAGCCATTTGCTCCGATGGGTCCCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HTRQRESRNLED*PSHLLRWVPGQ Trigger: CTGACCTGGGACCCATCGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCTTGATTCCCGTTGCCTGGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 72 bp | ACAAAGTCAGCAATAGCCACCCCAGGTCGGAGGGATTaGGCAGTCAGCACGGTGAAAATGGAAGGATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: TKSAIATPGRRD*AVSTVKMEGSA Trigger: TGCGGATCCTTCCATTTTCACCGTGCTGACTGCCAAATCCCTCCGACCTGGGGTGGCTATTGCTGACTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 90 bp | GGGAAGATGACAAAGTCAGCAATAGCCACCCCAGGTCGGAGGGATTaGGCAGTCAGCACGGTGAAAATGGAAGGATCCGCATGGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GKMTKSAIATPGRRD*AVSTVKMEGSAWSK Trigger: CTTTGACCATGCGGATCCTTCCATTTTCACCGTGCTGACTGCCAAATCCCTCCGACCTGGGGTGGCTATTGCTGACTTTGTCATCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 72 bp | TCATACCAGGCAACGGGAATCAAGAAATCTCGAGGATaGGCCAAGCCATTTGCTCCGATGGGTCCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SYQATGIKKSRG*AKPFAPMGPRS Trigger: TGACCTGGGACCCATCGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCTTGATTCCCGTTGCCTGGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 90 bp | CGACGATCTTCATACCAGGCAACGGGAATCAAGAAATCTCGAGGATaGGCCAAGCCATTTGCTCCGATGGGTCCCAGGTCAGGTAACTCA | + |
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Preference number: 6 (lower is better) Translates to: RRSSYQATGIKKSRG*AKPFAPMGPRSGNS Trigger: TGAGTTACCTGACCTGGGACCCATCGGAGCAAATGGCTTGGCCAATCCTCGAGATTTCTTGATTCCCGTTGCCTGGTATGAAGATCGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 72 bp | TCCTCAAAGACATCGACGCTGAATCGCATTCCTCTCTaGATGACGCAGATTTCATTGGGCTGCAGGGACATC | + |
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Preference number: 6 (lower is better) Translates to: SSKTSTLNRIPL*MTQISLGCRDI Trigger: GATGTCCCTGCAGCCCAATGAAATCTGCGTCATTCAGAGAGGAATGCGATTCAGCGTCGATGTCTTTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 72 bp | ACTCACTCATGCAGTTCCTGTGGTAATAAGGAGGTCTaGAGGTTTTATCTGCAACTCCCCACCGAGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: THSCSSCGNKEV*RFYLQLPTEVG Trigger: TCCCACCTCGGTGGGGAGTTGCAGATAAAACCTTCAGACCTCCTTATTACCACAGGAACTGCATGAGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 72 bp | TCCTTTGGGCAGGGAACCTGGACAGCGAGGATCCTCTaGAGCACACTCATTCCCAAATCCAGAAATGTACTT | + |
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Preference number: 6 (lower is better) Translates to: SFGQGTWTARIL*STLIPKSRNVL Trigger: AAGTACATTTCTGGATTTGGGAATGAGTGTGCTTCAGAGGATCCTCGCTGTCCAGGTTCCCTGCCCAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS TCA 72 bp | GCCTTGGTCGATGGACTCAAAGGGTTTGTGAGAAACTaGAGGAAGAATCCTATACAGCCAGCTGTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: ALVDGLKGFVRN*RKNPIQPAVLW Trigger: CCAAAGGACAGCTGGCTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCCTTTGAGTCCATCGACCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159787.8 |
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| CDS TCA 72 bp | GTGACATGGCCTTGGTCGATGGACTCAAAGGGTTTGTaGGAAACTGAAGGAAGAATCCTATACAGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VTWPWSMDSKGL*ETEGRILYSQL Trigger: CAGCTGGCTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCCTTTGAGTCCATCGACCAAGGCCATGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159787.8 |
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| CDS GCA 72 bp | GTTCCTGTGGTAATAAGGAGGTCTGAAGGTTTTATCTaGAACTCCCCACCGAGGTGGGAAGATGACAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VPVVIRRSEGFI*NSPPRWEDDKV Trigger: GACTTTGTCATCTTCCCACCTCGGTGGGGAGTTGCAGATAAAACCTTCAGACCTCCTTATTACCACAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 72 bp | GTGACATGGCCTTGGTCGATGGACTCAAAGGGTTTGTaGGAAACTGAAGGAAGAATCCTATACAGCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VTWPWSMDSKGL*ETEGRILYSQL Trigger: AAGCTGGCTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCCTTTGAGTCCATCGACCAAGGCCATGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS GCA 72 bp | CACCTGTTCTCCATGGAGGAGTTACACAGAAAAATGTaGACAGCAAGGCCGTTGTTAGACTTGATGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLFSMEELHRKM*TARPLLDLMSP Trigger: AGGAGACATCAAGTCTAACAACGGCCTTGCTGTGCACATTTTTCTGTGTAACTCCTCCATGGAGAACAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CCA 72 bp | CTTGCCCTGGAATTTATTAATCACAGTGTAACCACCTaGCACTCGACGATCTTCATACCAGGCAACGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LALEFINHSVTT*HSTIFIPGNGN Trigger: ATTCCCGTTGCCTGGTATGAAGATCGTCGAGTGCCAGGTGGTTACACTGTGATTAATAAATTCCAGGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 72 bp | GAGGAGTTACACAGAAAAATGTGCACAGCAAGGCCGTaGTTAGACTTGATGTCTCCTGCTCCACATAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: EELHRKMCTARP*LDLMSPAPHKV Trigger: CACCTTATGTGGAGCAGGAGACATCAAGTCTAACAACGGCCTTGCTGTGCACATTTTTCTGTGTAACTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS CAA 90 bp | TTCTCCATGGAGGAGTTACACAGAAAAATGTGCACAGCAAGGCCGTaGTTAGACTTGATGTCTCCTGCTCCACATAAGGTGTACAAACCA | + |
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Preference number: 6 (lower is better) Translates to: FSMEELHRKMCTARP*LDLMSPAPHKVYKP Trigger: TGGTTTGTACACCTTATGTGGAGCAGGAGACATCAAGTCTAACAACGGCCTTGCTGTGCACATTTTTCTGTGTAACTCCTCCATGGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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| CDS TCA 72 bp | GCCTTGGTCGATGGACTCAAAGGGTTTGTGAGAAACTaGAGGAAGAATCCTATACAGCCAGCTTCTCTTATT | + |
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Preference number: 6 (lower is better) Translates to: ALVDGLKGFVRN*RKNPIQPASLI Trigger: AATAAGAGAAGCTGGCTGTATAGGATTCTTCCTTCAGTTTCTCACAAACCCTTTGAGTCCATCGACCAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160847.2 |
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| CDS CAA 72 bp | TTCTCATCCAAACAGCTACAGGTCTTGAGTCCCCACTaGGTGACCGCCAAACTTAAGGAAGATTCAAACATA | + |
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Preference number: 6 (lower is better) Translates to: FSSKQLQVLSPH*VTAKLKEDSNI Trigger: TATGTTTGAATCTTCCTTAAGTTTGGCGGTCACCAAGTGGGGACTCAAGACCTGTAGCTGTTTGGATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159787.8 ENSMUST00000160847.2 |
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