Pregenerated sensors for HFE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006611Ensembl transcript IDs: ENSMUST00000006787.8, ENSMUST00000091706.14, ENSMUST00000091707.13, ENSMUST00000151243.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGTCAGAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTaGACCCTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: YVRGSGRLVGSGVTT*TLYWLVLCQLDTAG Trigger: TCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTCTGACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR CCA 90 bp | CAACAACAAGCCATATGTCAGAGGAAGCGGGAGACTGGTGGGCAGTaGAGTCACTACTTGCACCCTGTACTGGCTAGTTTTGTGTCAACT | + |
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Preference number: 1 (lower is better) Translates to: QQQAICQRKRETGGQ*SHYLHPVLASFVST Trigger: AGTTGACACAAAACTAGCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTCTGACATATGGCTTGTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR TCA 90 bp | CACACCCTGACCTTTCCCTCTAACTTGGAAAGGATTCCTGATAGCTaGGGACTGGTGAGTATTTGGCAGCTATTTCCCATCTTGTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: HTLTFPSNLERIPDS*GLVSIWQLFPILWV Trigger: GACCCACAAGATGGGAAATAGCTGCCAAATACTCACCAGTCCTCAGCTATCAGGAATCCTTTCCAAGTTAGAGGGAAAGGTCAGGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR TCA 90 bp | GGTGAGTATTTGGCAGCTATTTCCCATCTTGTGGGTCAAACTCACTaGAGAGAAACCCCAGGAGACAAGAAAAGGGCCATCTTCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: GEYLAAISHLVGQTH*RETPGDKKRAIFFL Trigger: GAGAAAGAAGATGGCCCTTTTCTTGTCTCCTGGGGTTTCTCTTCAGTGAGTTTGACCCACAAGATGGGAAATAGCTGCCAAATACTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR TCA 90 bp | ATGAGCAGCAGGACCCCAGCAACTCCAAGAATTCTCCAAGCCAAATaGCAGCTTCCATCCTACTGCCTTAAGATTGACAGATTGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: MSSRTPATPRILQAK*QLPSYCLKIDRLTD Trigger: ATCTGTCAATCTGTCAATCTTAAGGCAGTAGGATGGAAGCTGTCATTTGGCTTGGAGAATTCTTGGAGTTGCTGGGGTCCTGCTGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR TCA 90 bp | AAGCCAAATGACAGCTTCCATCCTACTGCCTTAAGATTGACAGATTaGCAGATTCTCGGCTGCCAGGGCAATCACTTTAAGGTTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: KPNDSFHPTALRLTD*QILGCQGNHFKVLI Trigger: GATCAGAACCTTAAAGTGATTGCCCTGGCAGCCGAGAATCTGTCAATCTGTCAATCTTAAGGCAGTAGGATGGAAGCTGTCATTTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR GCA 90 bp | CCTAAGAATCATGAGACCAGTTCTGGAGGGAGAGGTTGCAACTGGTaGAATCACTACTATTCAGGAACTGAACTTAACTGGAGAAAACAC | + |
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Preference number: 1 (lower is better) Translates to: PKNHETSSGGRGCNW*NHYYSGTELNWRKH Trigger: GTGTTTTCTCCAGTTAAGTTCAGTTCCTGAATAGTAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGAACTGGTCTCATGATTCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR TCA 90 bp | TCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTaGGGCATGTGGGTTTCAAGATGGAATTCATACCACGGAGACGCA | + |
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Preference number: 1 (lower is better) Translates to: SAQIQCSLKKLEPLV*GMWVSRWNSYHGDA Trigger: TGCGTCTCCGTGGTATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR GCA 90 bp | CAGATGTCTATGATATTAACCTTTGAAAACCTCAAGTCACCTTTGTaGAGATATGAACACAGAGCCATTGTTATACACACAAACATCTAC | + |
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Preference number: 1 (lower is better) Translates to: QMSMILTFENLKSPL*RYEHRAIVIHTNIY Trigger: GTAGATGTTTGTGTGTATAACAATGGCTCTGTGTTCATATCTGCACAAAGGTGACTTGAGGTTTTCAAAGGTTAATATCATAGACATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCGGGGAGGGCCCCTTGTaGGTGGGACCATCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: EEAGDWWAVESLLAPCTGGEGPL*VGPSLG Trigger: GCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCC...GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGGTGGGTCAAACTCACTaGAGAGAAACCCCAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGVGQTH*RETPGD Trigger: GTCTCCTGGGGTTTCTCTTCAGTGAGTTTGACCCAC...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTTCCCTCCATGGCTTCTaGATCAGCTCCTGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GGGPLVGGTISGLVVLGSSLHGF*ISSCFL Trigger: CAGAAAGCAGGAGCTGATGCAGAAGCCATGGAGGGA...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGCATTTTCTCCGAGGGTaGTTCCTCAAGTTGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGHFLRG*FLKLHS Trigger: ACTGTGCAACTTGAGGAATCACCCTCGGAGAAAATG...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGCTCAAGTCACCTTTGTaGAGATATGAACACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGLKSPL*RYEHRA Trigger: GGCTCTGTGTTCATATCTGCACAAAGGTGACTTGAG...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTGGAGGATAGTTGAGTaGGTCCTGGATTCTAGGATA | + |
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Preference number: 2 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGWRIVE*VLDSRI Trigger: TATCCTAGAATCCAGGACCCACTCAACTATCCTCCA...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTTGGAGGATAGTTGAGTaGGTCCTGGATTCTAGGATA | + |
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Preference number: 2 (lower is better) Translates to: GGGPLVGGTISGLVVLGSWRIVE*VLDSRI Trigger: TATCCTAGAATCCAGGACCCACTCAACTATCCTCCA...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCAAGAACATCCCTCCATaGCTTCTGCATCAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: EEAGDWWAVESLLAPCTGKNIPP*LLHQLL Trigger: CAGGAGCTGATGCAGAAGCCATGGAGGGATGTTCTT...GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTAACACCTTAAGAAAGTaGACAGAGAAAGCTAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GGGPLVGGTISGLVVLGSNTLRK*TEKAKS Trigger: GCTCTTAGCTTTCTCTGTTCACTTTCTTAAGGTGTT...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGTATAAGAGAGCAGGCTaGGCAAGCCAGGAGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LGGSEHVPSGWREEPTHMYKRAG*ASQEKQ Trigger: TTGCTTCTCCTGGCTTGCTCAGCCTGCTCTCTTATA...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCCTCAAGTCACCTTTGTaGAGATATGAACACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: EEAGDWWAVESLLAPCTGLKSPL*RYEHRA Trigger: GGCTCTGTGTTCATATCTGCACAAAGGTGACTTGAG...GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGCTTGAGTTCCAGTCCTaGCTTCCTTTGGTAATGAAC | + |
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Preference number: 2 (lower is better) Translates to: LGGSEHVPSGWREEPTHMLEFQS*LPLVMN Trigger: GTTCATTACCAAAGGAAGTCAGGACTGGAACTCAAG...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCCTTTCCTCTCCAACTTaGTTCTTGGTCATGATGTTT | + |
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Preference number: 2 (lower is better) Translates to: EEAGDWWAVESLLAPCTGLSSPT*FLVMMF Trigger: AAACATCATGACCAAGAAGCAAGTTGGAGAGGAAAG...GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGGGGAGAGGTTGCAACTaGTGCAATCACTACTATTCA | + |
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Preference number: 2 (lower is better) Translates to: LGGSEHVPSGWREEPTHMGRGCN*CNHYYS Trigger: TGAATAGTAGTGATTGCACCAGTTGCAACCTCTCCC...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCCTAAGAATCATGAGACCAGTTCTGGAGGGAGAGGTTGCAACTGGTGCACTCCAAGTCTTTGGCTaGGTTTTCTCTCTTCCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SSLRIMRPVLEGEVATGALQVFG*VFSLPW Trigger: CCACGGAAGAGAGAAAACTCAGCCAAAGACTTGGAG...TGCACCAGTTGCAACCTCTCCCTCCAGAACTGGTCTCATGATTCTTAGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGATCACTTTAAGGTTCTaGTCCAGAGGCATCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LGGSEHVPSGWREEPTHMITLRF*SRGISF Trigger: AAAGCTGATGCCTCTGGATCAGAACCTTAAAGTGAT...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGATACACACACAAACATaGAAGCACAGGCTTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: LGGSEHVPSGWREEPTHMIHTQT*KHRLDL Trigger: AAGGTCAAGCCTGTGCTTGCATGTTTGTGTGTGTAT...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCCAACTTCTTCAGATGTaGAAACGAATCATGTATCCA | + |
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Preference number: 2 (lower is better) Translates to: EEAGDWWAVESLLAPCTGQLLQM*KRIMYP Trigger: TGGATACATGATTCGTTTCCACATCTGAAGAAGTTG...GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGAGAGTTTTCACCTTTTaGATCTACAGAGAAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: LGGSEHVPSGWREEPTHMRVFTF*IYREGT Trigger: TGTTCCTTCTCTGTAGATGCAAAAGGTGAAAACTCT...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTGAGGGAGGAAGTGAGCATGTaGCATCCGGGTGGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLSSNSVFIKEIGAIGLREEVSM*HPGGER Trigger: CCTCTCTCCACCCGGATGGCACATGCTCACTTCCTC...CCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR CAA 90 bp | CTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCTAGTTTaGTGTCAACTTGACACAGCTGGAGTTATTACAGAGAAAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LVGSGVTTCTLYWLV*CQLDTAGVITEKGT Trigger: AGTTCCTTTCTCTGTAATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | CATATATATAACACTCCAATGGCAGAGAAGTCAGGGCATGGTGACAGAGGAGTCTCTGGAGGGAGAGGTTaGAACTGGTGCAATCACTAC | + |
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Preference number: 2 (lower is better) Translates to: HIYNTPMAEKSGHGDRGVSGGRG*NWCNHY Trigger: GTAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGA...GACTCCTCTGTCACCATGCCCTGACTTCTCTGCCATTGGAGTGTTATATATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTGAGGGAGACTGGTGGGCAGTaGAGTCACTACTTGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: GLSSNSVFIKEIGAIGLRETGGQ*SHYLHP Trigger: AGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTC...CCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAATTGGAGCCATTGGTCTGAGGCATGTGGGTTTCAAGATGGAATTCATAGAAGCGGGAGACTGGTaGGCAGTGGAGTCACTACTT | + |
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Preference number: 2 (lower is better) Translates to: KEIGAIGLRHVGFKMEFIEAGDW*AVESLL Trigger: AAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTC...TATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTGAGGTATAAGAGAGCAGGCTaGGCAAGCCAGGAGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GLSSNSVFIKEIGAIGLRYKRAG*ASQEKQ Trigger: TTGCTTCTCCTGGCTTGCTCAGCCTGCTCTCTTATA...CCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR TCA 90 bp | CATATATATAACACTCCAATGGCAGAGAAGTCAGGGCATGGTGACAGAGGAGTCAACACCTTAAGAAAGTaGACAGAGAAAGCTAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: HIYNTPMAEKSGHGDRGVNTLRK*TEKAKS Trigger: GCTCTTAGCTTTCTCTGTTCACTTTCTTAAGGTGTT...GACTCCTCTGTCACCATGCCCTGACTTCTCTGCCATTGGAGTGTTATATATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAATTGGAGCCATTGGTCTGAGGCATGTGGGTTTCAAGATGGAATTCATAAGTGGAGTCACTACTTaGACCCTGTACTGGCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: KEIGAIGLRHVGFKMEFISGVTT*TLYWLV Trigger: AACTAGCCAGTACAGGGTGCAAGTAGTGACTCCACT...TATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTGAGGCTTCCTCAGAACAAGTaGAAGCCACACTTCATTATG | + |
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Preference number: 2 (lower is better) Translates to: GLSSNSVFIKEIGAIGLRLPQNK*KPHFIM Trigger: CATAATGAAGTGTGGCTTGCACTTGTTCTGAGGAAG...CCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGAGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTGAGGATACACACACAAACATaGAAGCACAGGCTTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: GLSSNSVFIKEIGAIGLRIHTQT*KHRLDL Trigger: AAGGTCAAGCCTGTGCTTGCATGTTTGTGTGTGTAT...CCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGAGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCCAAGAAGCAGCCTAAGAATCATGAGACCAGTTCTGGAGGGAGAGGTTGGAACTGAACTTAACTaGAGAAAACACCTTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MLPRSSLRIMRPVLEGEVGTELN*RKHLKK Trigger: TTTCTTAAGGTGTTTTCTCCAGTTAAGTTCAGTTCC...AACCTCTCCCTCCAGAACTGGTCTCATGATTCTTAGGCTGCTTCTTGGAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR CAA 90 bp | CTGTCTTTCTGTATCTCTGGTGAGTGGTTAGAGAGTTTTCACCTTTaGCATCTACAGAGAAGGAACATGGGTGCAGATAATAATTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LSFCISGEWLESFHL*HLQRRNMGADNNFH Trigger: GTGGAAATTATTATCTGCACCCATGTTCCTTCTCTGTAGATGCAAAAGGTGAAAACTCTCTAACCACTCACCAGAGATACAGAAAGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAATTGGAGCCATTGGTCTGAGGCATGTGGGTTTCAAGATGGAATTCATACTATTTCCCATCTTGTaGGTCAAACTCACTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KEIGAIGLRHVGFKMEFILFPIL*VKLTEE Trigger: CTCTTCAGTGAGTTTGACCCACAAGATGGGAAATAG...TATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR CAA 90 bp | TTGAAAACCTCAAGTCACCTTTGTGCAGATATGAACACAGAGCCATaGTTATACACACAAACATCTACATTTTCTCCGAGGGTGATTCCT | + |
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Preference number: 2 (lower is better) Translates to: LKTSSHLCADMNTEP*LYTQTSTFSPRVIP Trigger: AGGAATCACCCTCGGAGAAAATGTAGATGTTTGTGTGTATAACAATGGCTCTGTGTTCATATCTGCACAAAGGTGACTTGAGGTTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CCA 90 bp | CAACAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCTCCAACTTGCTTCTTTACAGAGAAGGAACATaGGTGCAGATAATAATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QQYGSVSRINPFLSNLLLYREGT*VQIIIS Trigger: GGAAATTATTATCTGCACCCATGTTCCTTCTCTGTA...AAGAAGCAAGTTGGAGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTGCCCCCTCCAAGTCTTaGGCTGAGTTTTCTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GGGPLVGGTISGLVVLGSAPSKS*AEFSLF Trigger: GAAGAGAGAAAACTCAGCCAAAGACTTGGAGGGGGC...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | CACGGAGACGCAGGCAAATGTGTGTTTAGGAGGAAGTaGGCATGTGCCATCCGGGTGGAGAGAGGAGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HGDAGKCVFRRK*ACAIRVERGAH Trigger: GTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAAACACACATTTGCCTGCGTCTCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGCAGCTATTTCCCATCTaGTGGGTCAAACTCACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGQLFPI*WVKLTE Trigger: TTCAGTGAGTTTGACCCACAAGATGGGAAATAGCTG...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTCCTTTCCTCTCCAACTaGCTTCTTGGTCATGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: GGGPLVGGTISGLVVLGSPFLSN*LLGHDV Trigger: AACATCATGACCAAGAAGCAAGTTGGAGAGGAAAGG...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | ACAGTGGAGCAAGTGTGCCCCCTCCAAGTCTTTGGCTaGGTTTTCTCTCTTCCGTGGTTCAGCAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TVEQVCPLQVFG*VFSLPWFSRLQ Trigger: CTGCAGCCTGCTGAACCACGGAAGAGAGAAAACTCAGCCAAAGACTTGGAGGGGGCACACTTGCTCCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR CCA 72 bp | ACAACAAGCCATATGTCAGAGGAAGCGGGAGACTGGTaGGCAGTGGAGTCACTACTTGCACCCTGTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TTSHMSEEAGDW*AVESLLAPCTG Trigger: GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTCTGACATATGGCTTGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR CCA 72 bp | GTGTGTTTAGGAGGAAGTGAGCATGTGCCATCCGGGTaGAGAGAGGAGCCCACACACATGTGCATACACGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCLGGSEHVPSG*REEPTHMCIHV Trigger: CACGTGTATGCACATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAAACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR GCA 72 bp | GGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTaGACCCTGTACTGGCTAGTTTTGTGTCAACTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSGRLVGSGVTT*TLYWLVLCQLD Trigger: GTCAAGTTGACACAAAACTAGCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR CCA 72 bp | GCCATATGTCAGAGGAAGCGGGAGACTGGTGGGCAGTaGAGTCACTACTTGCACCCTGTACTGGCTAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AICQRKRETGGQ*SHYLHPVLASF Trigger: AAAACTAGCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTCTGACATATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATTACAGAGAAAGGAACTAAGGGGGAGGGCCCCTaGTGGGTGGGACCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLVLCQLDTAGVITEKGTKGEGP*WVGPSL Trigger: CAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTT...AGTTCCTTTCTCTGTAATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR GCA 72 bp | CAAAGAACATCCCTCCATGGCTTCTGCATCAGCTCCTaGTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: QRTSLHGFCISS*FLTCLSSSPDF Trigger: GAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATGCAGAAGCCATGGAGGGATGTTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR GCA 72 bp | GAAGCAAACCAGCAAAGAACATCCCTCCATGGCTTCTaGATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EANQQRTSLHGF*ISSCFLTCLSS Trigger: GGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATGCAGAAGCCATGGAGGGATGTTCTTTGCTGGTTTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGCATGCAAGCACAGGCTaGACCTTTTTAACATTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LGGSEHVPSGWREEPTHMHASTG*TFLTLD Trigger: ATCTAATGTTAAAAAGGTCAAGCCTGTGCTTGCATG...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | TGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTaGGCAAGCCAGGAGAAGCAAACCAGCAAAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: WAGSLGFYKRAG*ASQEKQTSKEH Trigger: ATGTTCTTTGCTGGTTTGCTTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATATATAACACTCCAATGGCAGAGAAGTCAGGGCATGGTGACAGAGGAGTCGCCCCCTCCAAGTCTTaGGCTGAGTTTTCTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HIYNTPMAEKSGHGDRGVAPSKS*AEFSLF Trigger: GAAGAGAGAAAACTCAGCCAAAGACTTGGAGGGGGC...GACTCCTCTGTCACCATGCCCTGACTTCTCTGCCATTGGAGTGTTATATATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | CAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTaGCTTCCTTTGGTAATGAACAACAGTATGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLLLSDLLEFQS*LPLVMNNSMEV Trigger: CACTTCCATACTGTTGTTCATTACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | GACAGCTTCCATCCTACTGCCTTAAGATTGACAGATTaGCAGATTCTCGGCTGCCAGGGCAATCACTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DSFHPTALRLTD*QILGCQGNHFK Trigger: CTTAAAGTGATTGCCCTGGCAGCCGAGAATCTGTCAATCTGTCAATCTTAAGGCAGTAGGATGGAAGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR GCA 72 bp | CATGAGACCAGTTCTGGAGGGAGAGGTTGCAACTGGTaGAATCACTACTATTCAGGAACTGAACTTAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HETSSGGRGCNW*NHYYSGTELNW Trigger: CCAGTTAAGTTCAGTTCCTGAATAGTAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGAACTGGTCTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | ACCTTTCCCTCTAACTTGGAAAGGATTCCTGATAGCTaGGGACTGGTGAGTATTTGGCAGCTATTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: TFPSNLERIPDS*GLVSIWQLFPI Trigger: GATGGGAAATAGCTGCCAAATACTCACCAGTCCTCAGCTATCAGGAATCCTTTCCAAGTTAGAGGGAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR GCA 72 bp | CCTAAGAATCATGAGACCAGTTCTGGAGGGAGAGGTTaGAACTGGTGCAATCACTACTATTCAGGAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PKNHETSSGGRG*NWCNHYYSGTE Trigger: TTCAGTTCCTGAATAGTAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGAACTGGTCTCATGATTCTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATTACAGAGAAAGGAACTTTCTGGAGGGAGAGGTaGCAACTGGTGCAATCACTA | + |
|
Preference number: 3 (lower is better) Translates to: WLVLCQLDTAGVITEKGTFWRER*QLVQSL Trigger: TAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGAA...AGTTCCTTTCTCTGTAATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAATTGGAGCCATTGGTCTGAGGCATGTGGGTTTCAAGATGGAATTCATATTCTGGAGGGAGAGGTaGCAACTGGTGCAATCACTA | + |
|
Preference number: 3 (lower is better) Translates to: KEIGAIGLRHVGFKMEFIFWRER*QLVQSL Trigger: TAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGAA...TATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | CACAGCTGGAGTTATTACAGAGAAAGGAACTTCAGTTaGGGAAATGCCTCCATGAGATCCAACTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSWSYYRERNFS*GNASMRSNCKA Trigger: TGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAGTTCCTTTCTCTGTAATAACTCCAGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR CCA 72 bp | AATCATGAGACCAGTTCTGGAGGGAGAGGTTGCAACTaGTGCAATCACTACTATTCAGGAACTGAACTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: NHETSSGGRGCN*CNHYYSGTELN Trigger: GTTAAGTTCAGTTCCTGAATAGTAGTGATTGCACCAGTTGCAACCTCTCCCTCCAGAACTGGTCTCATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | AAAATTCTGGCTCAAGTATGTGTGAGCATCCCCGGATaGAGGTTCACAACTTCTTCAGATGTGGAAACGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KILAQVCVSIPG*RFTTSSDVETN Trigger: ATTCGTTTCCACATCTGAAGAAGTTGTGAACCTTCATCCGGGGATGCTCACACATACTTGAGCCAGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | TACTTGCACCCTGTACTGGCTAGTTTTGTGTCAACTTaGCACAGCTGGAGTTATTACAGAGAAAGGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: YLHPVLASFVST*HSWSYYRERNF Trigger: GAAGTTCCTTTCTCTGTAATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAGGGTGCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCTCCAACTTGCTTCTTGAGAGTTTTCACCTTTaGCATCTACAGAGAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QQYGSVSRINPFLSNLLLESFHL*HLQRRN Trigger: GTTCCTTCTCTGTAGATGCAAAAGGTGAAAACTCTC...AAGAAGCAAGTTGGAGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAAATTGGAGCCATTGGTCTGAGGCATGTGGGTTTCAAGATGGAATTCATAAACCTCAAGTCACCTTaGTGCAGATATGAACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KEIGAIGLRHVGFKMEFINLKSP*CRYEHR Trigger: TCTGTGTTCATATCTGCACAAAGGTGACTTGAGGTT...TATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATTACAGAGAAAGGAACTGAGAGTTTTCACCTTTaGCATCTACAGAGAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WLVLCQLDTAGVITEKGTESFHL*HLQRRN Trigger: GTTCCTTCTCTGTAGATGCAAAAGGTGAAAACTCTC...AGTTCCTTTCTCTGTAATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATTACAGAGAAAGGAACTGAGCAGAGTATATTATaGAGCACTTCCTCAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: WLVLCQLDTAGVITEKGTEQSIL*STSSEQ Trigger: TTGTTCTGAGGAAGTGCTCAATAATATACTCTGCTC...AGTTCCTTTCTCTGTAATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | ACAACATACAAGCTGCTAGTGGTTCTTGTCATTCATTaGGGAAATGATGGAACTACGTTTATCTATTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TTYKLLVVLVIH*GNDGTTFIYFQ Trigger: TTGGAAATAGATAAACGTAGTTCCATCATTTCCTCAATGAATGACAAGAACCACTAGCAGCTTGTATGTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR TCA 72 bp | CAAGCTGCTAGTGGTTCTTGTCATTCATTGAGGAAATaGTGGAACTACGTTTATCTATTTCCAAAAATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QAASGSCHSLRK*WNYVYLFPKMN Trigger: ATTCATTTTTGGAAATAGATAAACGTAGTTCCATCATTTCCTCAATGAATGACAAGAACCACTAGCAGCTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTCAGCCACAGCTGGCTTaGGGTTTGCTCCAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGPLVGGTISGLVVLGSQPQLA*GLLQDP Trigger: TGGATCTTGGAGCAAACCTCAAGCCAGCTGTGGCTG...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGCGGGAGACTGGTGGGCAGTGGAGTCACTACTTGCACCCTGTACTGGCCACCCTTTCAGGCTCTaGCTCAGATGCAGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEAGDWWAVESLLAPCTGHPFRL*LRCSHS Trigger: GCTGTGGCTGCATCTGAGTCAGAGCCTGAAAGGGTG...GCCAGTACAGGGTGCAAGTAGTGACTCCACTGCCCACCAGTCTCCCGCTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR GCA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGGTACTGTTGTCTTCATaGACCTCACAGCCTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGVLLSS*TSQPRT Trigger: GGTCCTAGGCTGTGAGGTGCATGAAGACAACAGTAC...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGGCTCCACTTGACAGGTaGACCTTGTCTCGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGGSEHVPSGWREEPTHMAPLDR*TLSRPQ Trigger: CTGGGGACGAGACAAGGTTCACCTGTCAAGTGGAGC...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGCCGATAATCATGGCCTaGGATTGCAAGGGCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGGSEHVPSGWREEPTHMPIIMA*DCKGSQ Trigger: TTGGGAGCCCTTGCAATCTCAGGCCATGATTATCGG...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR CCA 90 bp | ATGCTTCCAAGAAGCAGCCTAAGAATCATGAGACCAGTTCTGGAGGGAGAGGTTCGTCCCATTCCACCTTaGTGGCCCAGGCCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLPRSSLRIMRPVLEGEVRPIPP*WPRPLA Trigger: AGCCAGGGGCCTGGGCCACCAAGGTGGAATGGGACG...AACCTCTCCCTCCAGAACTGGTCTCATGATTCTTAGGCTGCTTCTTGGAAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| 3UTR CAA 72 bp | GTCCTACAGTGGAGCAAGTGTGCCCCCTCCAAGTCTTaGGCTGAGTTTTCTCTCTTCCGTGGTTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLQWSKCAPSKS*AEFSLFRGSAG Trigger: GCCTGCTGAACCACGGAAGAGAGAAAACTCAGCCAAAGACTTGGAGGGGGCACACTTGCTCCACTGTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| CDS-3UTR TCA 90 bp | CTACAGTGGAGCAAGTGTGCCCCCTCCAAGTCTTTGGCTGAGTTTTCTCTCTTCAAGAAGTCCAGAGCCTaGCACCTTAGAGAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQWSKCAPSKSLAEFSLFKKSRA*HLREVP Trigger: GGGGACCTCTCTAAGGTGTCAGGCTCTGGACTTCTT...GAAGAGAGAAAACTCAGCCAAAGACTTGGAGGGGGCACACTTGCTCCACTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGGAAGTGAGCATGTGCCATCCGGGTGGAGAGAGGAGCCCACACACATGGCTCTGAGGCACCCATaGAGAGGTATCTTAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGGSEHVPSGWREEPTHMALRHP*RGILEN Trigger: ATTCTCTAAGATACCTCTTCATGGGTGCCTCAGAGC...CATGTGTGTGGGCTCCTCTCTCCACCCGGATGGCACATGCTCACTTCCTCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR CCA 90 bp | CAACAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCTCCAACTTGCTTCTTCCCATTCCACCTTGGTaGCCCAGGCCCCTGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QQYGSVSRINPFLSNLLLPIPPW*PRPLAR Trigger: CCGAGCCAGGGGCCTGGGCCACCAAGGTGGAATGGG...AAGAAGCAAGTTGGAGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR CCA 90 bp | CTACAGTGGAGCAAGTGTGCCCCCTCCAAGTCTTTGGCTGAGTTTTCTCTCTTCTCCAGTTTAGTGTCTTaGGGCAGAATTCCAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQWSKCAPSKSLAEFSLFSSLVS*GRIPGD Trigger: ATCACCTGGAATTCTGCCCCAAGACACTAAACTGGA...GAAGAGAGAAAACTCAGCCAAAGACTTGGAGGGGGCACACTTGCTCCACTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
||
| CDS-3UTR CCA 90 bp | GGTCTCAGCTCAAATTCAGTGTTCATTAAAGAAATTGGAGCCATTGGTCTGAGGAGACATAGCCACCCATaGTTCCTCCTGAAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSSNSVFIKEIGAIGLRRHSHP*FLLKPS Trigger: GGAAGGCTTCAGGAGGAACCATGGGTGGCTATGTCT...CCTCAGACCAATGGCTCCAATTTCTTTAATGAACACTGAATTTGAGCTGAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATTGGAGCCATTGGTCTGAGGCATGTGGGTTTCAAGATGGAATTCATAAGACATAGCCACCCATaGTTCCTCCTGAAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEIGAIGLRHVGFKMEFIRHSHP*FLLKPS Trigger: GGAAGGCTTCAGGAGGAACCATGGGTGGCTATGTCT...TATGAATTCCATCTTGAAACCCACATGCCTCAGACCAATGGCTCCAATTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR CAA 72 bp | ACATTTTCTCCGAGGGTGATTCCTCAAGTTGCACAGTaGTGTAGCCTTCATGGCTTTATTGATGATCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSPRVIPQVAQ*CSLHGFIDDPY Trigger: ATATGGATCATCAATAAAGCCATGAAGGCTACACAACTGTGCAACTTGAGGAATCACCCTCGGAGAAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
||
| 3UTR CAA 72 bp | TGTATCTCTGGTGAGTGGTTAGAGAGTTTTCACCTTTaGCATCTACAGAGAAGGAACATGGGTGCAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CISGEWLESFHL*HLQRRNMGADN Trigger: ATTATCTGCACCCATGTTCCTTCTCTGTAGATGCAAAAGGTGAAAACTCTCTAACCACTCACCAGAGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR CAA 72 bp | CTCAAGTTGCACAGTTGTGTAGCCTTCATGGCTTTATaGATGATCCATATATATAACACTCCAATGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKLHSCVAFMAL*MIHIYNTPMAE Trigger: CTCTGCCATTGGAGTGTTATATATATGGATCATCAATAAAGCCATGAAGGCTACACAACTGTGCAACTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| 3UTR CAA 72 bp | GCTTACCAAATCATGTGTTTATTAGTTGCACACACTTaGAGGAGAGTCATACAGAGACAACATACAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AYQIMCLLVAHT*RRVIQRQHTSC Trigger: GCAGCTTGTATGTTGTCTCTGTATGACTCTCCTCAAAGTGTGTGCAACTAATAAACACATGATTTGGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000151243.2 |
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| CDS GCA 90 bp | TGGGACTCGGACACCACTCCCAACTTCGTGAGCGGTGGCAGTGCCTaGGGGGCCACGGACCACAGCAGTAGCAGCAGCAGCAGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WDSDTTPNFVSGGSA*GATDHSSSSSSSSG Trigger: GCCGCTGCTGCTGCTGCTGCTACTGCTGTGGTCCGTGGCCCCGCAGGCACTGCCACCGCTCACGAAGTTGGGAGTGGTGTCCGAGTCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091707.13 |
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| CDS GCA 90 bp | CAGTGGCGAGTCACTTTCACCAAAGTAGGCAGCGGTGGCAGTGCCTaGGGGGCCACGGACCACAGCAGTAGCAGCAGCAGCAGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QWRVTFTKVGSGGSA*GATDHSSSSSSSSG Trigger: GCCGCTGCTGCTGCTGCTGCTACTGCTGTGGTCCGTGGCCCCGCAGGCACTGCCACCGCTGCCTACTTTGGTGAAAGTGACTCGCCACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006787.8 |
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| CDS TCA 90 bp | GTCCCACCCTTTCAGGCTCTGACTCAGATGCAGCCACAGCTGGCTTaGGGTTTGCTCCAAGATCCACGGGGCCCTGGGCTCAGCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPPFQALTQMQPQLA*GLLQDPRGPGLSTA Trigger: CGCCGTGCTGAGCCCAGGGCCCCGTGGATCTTGGAGCAAACCTCAAGCCAGCTGTGGCTGCATCTGAGTCAGAGCCTGAAAGGGTGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CCA 90 bp | TCAGCTGCTCGGGGCAGTCCTTCTCCAGGTAGTCCCTGTTCTGTTTaGCACGGATCTTGTGCTCGTCCCATTCCACCTTGGTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAARGSPSPGSPCSV*HGSCARPIPPWWPR Trigger: CCTGGGCCACCAAGGTGGAATGGGACGAGCACAAGATCCGTGCCAAACAGAACAGGGACTACCTGGAGAAGGACTGCCCCGAGCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGAAGCCGCTGGTACTGTaGTCTTCATGCACCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGRAPCGWDHLWAGSLGKPLVL*SSCTSQ Trigger: CTGTGAGGTGCATGAAGACAACAGTACCAGCGGCTT...CCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCCTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CCA 90 bp | TGGTGGCCCAGGCCCCTGGCTCGGCTGCGCTCCAGTTTAGTGTCTTaGGGCAGAATTCCAGGTGATCTTGCCCGTCATAACCATATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WWPRPLARLRSSLVS*GRIPGDLARHNHIS Trigger: GGAGATATGGTTATGACGGGCAAGATCACCTGGAATTCTGCCCCAAGACACTAAACTGGAGCGCAGCCGAGCCAGGGGCCTGGGCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CCA 90 bp | GCAGCCACAGCTGGCTTGAGGTTTGCTCCAAGATCCACGGGGCCCTaGGCTCAGCACGGCGACTCTCATGATTGTAGGACACAAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AATAGLRFAPRSTGP*AQHGDSHDCRTQRA Trigger: AGCTCTTTGTGTCCTACAATCATGAGAGTCGCCGTGCTGAGCCCAGGGCCCCGTGGATCTTGGAGCAAACCTCAAGCCAGCTGTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTTTTGGCATCCAGTGGTaGGTTGTCCTTCAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GGGPLVGGTISGLVVLGSFGIQW*VVLQPP Trigger: AGGTGGTTGAAGGACAACCAACCACTGGATGCCAAA...AGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS TCA 90 bp | TTCAACCACCTCATAGTGATGTTCTGGGGGAAGAAGTCCAGAGCCTaGCACCTTAGAGAGGTCCCCGTAGAGGCCCAGTGGCGAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FNHLIVMFWGKKSRA*HLREVPVEAQWRVT Trigger: AGTGACTCGCCACTGGGCCTCTACGGGGACCTCTCTAAGGTGTCAGGCTCTGGACTTCTTCCCCCAGAACATCACTATGAGGTGGTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS-3UTR CAA 90 bp | CAACAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCTCCAACTTGCTTCTTTCGTCCCATTCCACCTaGGTGGCCCAGGCCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QQYGSVSRINPFLSNLLLSSHST*VAQAPG Trigger: GCCAGGGGCCTGGGCCACCAAGGTGGAATGGGACGA...AAGAAGCAAGTTGGAGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CCA 90 bp | TTAGGTAGCACCTTCTCGGGGTTGACATCTTTGGCATCCAGTGGTTaGTTGTCCTTCAACCACCTCATAGTGATGTTCTGGGGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSTFSGLTSLASSG*LSFNHLIVMFWGKK Trigger: CTTCTTCCCCCAGAACATCACTATGAGGTGGTTGAAGGACAACCAACCACTGGATGCCAAAGATGTCAACCCCGAGAAGGTGCTACCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS TCA 72 bp | GCAGGATGTGGGACTCGGACACCACTCCCAACTTCGTaGGCGGTGGCAGTGCCTGCGGGGCCACGGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: AGCGTRTPLPTS*AVAVPAGPRTT Trigger: TGTGGTCCGTGGCCCCGCAGGCACTGCCACCGCTCACGAAGTTGGGAGTGGTGTCCGAGTCCCACATCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091707.13 |
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| CDS GCA 72 bp | GACACCACTCCCAACTTCGTGAGCGGTGGCAGTGCCTaGGGGGCCACGGACCACAGCAGTAGCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DTTPNFVSGGSA*GATDHSSSSSS Trigger: GCTGCTGCTGCTACTGCTGTGGTCCGTGGCCCCGCAGGCACTGCCACCGCTCACGAAGTTGGGAGTGGTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091707.13 |
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| CDS CCA 72 bp | GTTTGGCACGGATCTTGTGCTCGTCCCATTCCACCTTaGTGGCCCAGGCCCCTGGCTCGGCTGCGCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VWHGSCARPIPP*WPRPLARLRSS Trigger: ACTGGAGCGCAGCCGAGCCAGGGGCCTGGGCCACCAAGGTGGAATGGGACGAGCACAAGATCCGTGCCAAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 72 bp | TGTTTGGCACGGATCTTGTGCTCGTCCCATTCCACCTaGGTGGCCCAGGCCCCTGGCTCGGCTGCGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CLARILCSSHST*VAQAPGSAALQ Trigger: CTGGAGCGCAGCCGAGCCAGGGGCCTGGGCCACCAAGGTGGAATGGGACGAGCACAAGATCCGTGCCAAACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS GCA 72 bp | GTCACTTTCACCAAAGTAGGCAGCGGTGGCAGTGCCTaGGGGGCCACGGACCACAGCAGTAGCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTFTKVGSGGSA*GATDHSSSSSS Trigger: GCTGCTGCTGCTACTGCTGTGGTCCGTGGCCCCGCAGGCACTGCCACCGCTGCCTACTTTGGTGAAAGTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006787.8 |
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| CDS CCA 72 bp | TGGCACGGATCTTGTGCTCGTCCCATTCCACCTTGGTaGCCCAGGCCCCTGGCTCGGCTGCGCTCCAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: WHGSCARPIPPW*PRPLARLRSSL Trigger: TAAACTGGAGCGCAGCCGAGCCAGGGGCCTGGGCCACCAAGGTGGAATGGGACGAGCACAAGATCCGTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 90 bp | AGTCCCACCCTTTCAGGCTCTGACTCAGATGCAGCCACAGCTGGCTaGAGGTTTGCTCCAAGATCCACGGGGCCCTGGGCTCAGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPTLSGSDSDAATAG*RFAPRSTGPWAQHG Trigger: GCCGTGCTGAGCCCAGGGCCCCGTGGATCTTGGAGCAAACCTCAAGCCAGCTGTGGCTGCATCTGAGTCAGAGCCTGAAAGGGTGGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CAA 90 bp | TCCCTGTTCTGTTTGGCACGGATCTTGTGCTCGTCCCATTCCACCTaGGTGGCCCAGGCCCCTGGCTCGGCTGCGCTCCAGTTTAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLFCLARILCSSHST*VAQAPGSAALQFSV Trigger: GACACTAAACTGGAGCGCAGCCGAGCCAGGGGCCTGGGCCACCAAGGTGGAATGGGACGAGCACAAGATCCGTGCCAAACAGAACAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 90 bp | CCCCGTAGAGGCCCAGTGGCGAGTCACTTTCACCAAAGTAGGCACTaGCTGTCCCAGAACGCCTCTCCCCAGCTCCAGGAGCCGTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRRGPVASHFHQSRH*LSQNASPQLQEPFQ Trigger: CTGAAACGGCTCCTGGAGCTGGGGAGAGGCGTTCTGGGACAGCAAGTGCCTACTTTGGTGAAAGTGACTCGCCACTGGGCCTCTACGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS GCA 72 bp | GCCCAGTGGCGAGTCACTTTCACCAAAGTAGGCACTTaGTGTCCCAGAACGCCTCTCCCCAGCTCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQWRVTFTKVGT*CPRTPLPSSRS Trigger: GCTCCTGGAGCTGGGGAGAGGCGTTCTGGGACAGCAAGTGCCTACTTTGGTGAAAGTGACTCGCCACTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS GCA 72 bp | AGGTATCTTAGAGAATGTGAACGCGGTGGCAGTGCCTaGGGGGCCACGGACCACAGCAGTAGCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RYLRECERGGSA*GATDHSSSSSS Trigger: GCTGCTGCTGCTACTGCTGTGGTCCGTGGCCCCGCAGGCACTGCCACCGCGTTCACATTCTCTAAGATACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS TCA 72 bp | TTTCAGGCTCTGACTCAGATGCAGCCACAGCTGGCTTaGGGTTTGCTCCAAGATCCACGGGGCCCTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FQALTQMQPQLA*GLLQDPRGPGL Trigger: GAGCCCAGGGCCCCGTGGATCTTGGAGCAAACCTCAAGCCAGCTGTGGCTGCATCTGAGTCAGAGCCTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CCA 72 bp | GCTGGCTTGAGGTTTGCTCCAAGATCCACGGGGCCCTaGGCTCAGCACGGCGACTCTCATGATTGTAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: AGLRFAPRSTGP*AQHGDSHDCRT Trigger: TGTCCTACAATCATGAGAGTCGCCGTGCTGAGCCCAGGGCCCCGTGGATCTTGGAGCAAACCTCAAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CCA 72 bp | AGGCCCCTGGCTCGGCTGCGCTCCAGTTTAGTGTCTTaGGGCAGAATTCCAGGTGATCTTGCCCGTCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: RPLARLRSSLVS*GRIPGDLARHN Trigger: GTTATGACGGGCAAGATCACCTGGAATTCTGCCCCAAGACACTAAACTGGAGCGCAGCCGAGCCAGGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CCA 72 bp | CGGGGCAGTCCTTCTCCAGGTAGTCCCTGTTCTGTTTaGCACGGATCTTGTGCTCGTCCCATTCCACCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGSPSPGSPCSV*HGSCARPIPPW Trigger: CCAAGGTGGAATGGGACGAGCACAAGATCCGTGCCAAACAGAACAGGGACTACCTGGAGAAGGACTGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 90 bp | ACAGACGGTGACTCCACTGATGATTCCGATAATCATGGCCTGAGATaGCAAGGGCTCCCAAGAGGCAGTGAGAGGCTGGTCCAGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TDGDSTDDSDNHGLR*QGLPRGSERLVQAW Trigger: CCAGGCCTGGACCAGCCTCTCACTGCCTCTTGGGAGCCCTTGCAATCTCAGGCCATGATTATCGGAATCATCAGTGGAGTCACCGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS TCA 72 bp | CTCATAGTGATGTTCTGGGGGAAGAAGTCCAGAGCCTaGCACCTTAGAGAGGTCCCCGTAGAGGCCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LIVMFWGKKSRA*HLREVPVEAQW Trigger: CCACTGGGCCTCTACGGGGACCTCTCTAAGGTGTCAGGCTCTGGACTTCTTCCCCCAGAACATCACTATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS TCA 72 bp | ACAAAGGCAGCCCGAGGTCTGGCTCTGAGGCACCCATaGAGAGGTATCTTAGAGAATGTGAACGCGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TKAARGLALRHP*RGILENVNAVA Trigger: TGCCACCGCGTTCACATTCTCTAAGATACCTCTTCATGGGTGCCTCAGAGCCAGACCTCGGGCTGCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091706.14 |
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| CDS CAA 72 bp | GACTCCACTGATGATTCCGATAATCATGGCCTGAGATaGCAAGGGCTCCCAAGAGGCAGTGAGAGGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DSTDDSDNHGLR*QGLPRGSERLV Trigger: GACCAGCCTCTCACTGCCTCTTGGGAGCCCTTGCAATCTCAGGCCATGATTATCGGAATCATCAGTGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 90 bp | GGTAGCACCTTCTCGGGGTTGACATCTTTGGCATCCAGTGGTTGGTaGTCCTTCAACCACCTCATAGTGATGTTCTGGGGGAAGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSTFSGLTSLASSGW*SFNHLIVMFWGKKS Trigger: GGACTTCTTCCCCCAGAACATCACTATGAGGTGGTTGAAGGACAACCAACCACTGGATGCCAAAGATGTCAACCCCGAGAAGGTGCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 72 bp | TTCTCGGGGTTGACATCTTTGGCATCCAGTGGTTGGTaGTCCTTCAACCACCTCATAGTGATGTTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSGLTSLASSGW*SFNHLIVMFWG Trigger: CCCCCAGAACATCACTATGAGGTGGTTGAAGGACAACCAACCACTGGATGCCAAAGATGTCAACCCCGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CCA 72 bp | ACCTTCTCGGGGTTGACATCTTTGGCATCCAGTGGTTaGTTGTCCTTCAACCACCTCATAGTGATGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TFSGLTSLASSG*LSFNHLIVMFW Trigger: CCAGAACATCACTATGAGGTGGTTGAAGGACAACCAACCACTGGATGCCAAAGATGTCAACCCCGAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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| CDS CAA 72 bp | CACCTTCTCGGGGTTGACATCTTTGGCATCCAGTGGTaGGTTGTCCTTCAACCACCTCATAGTGATGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLLGVDIFGIQW*VVLQPPHSDVL Trigger: CAGAACATCACTATGAGGTGGTTGAAGGACAACCAACCACTGGATGCCAAAGATGTCAACCCCGAGAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006787.8 ENSMUST00000091706.14 ENSMUST00000091707.13 |
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