Pregenerated sensors for HDX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034551Ensembl transcript IDs: ENSMUST00000038472.7, ENSMUST00000113422.9
Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGAGCTGCTaGTCACCTGCACTAGGGGAGCACATATTCCTCCCTCAAAGCTCA | + |
Preference number: 1 (lower is better) Translates to: RRRRRRRRRRRWRSC*SPALGEHIFLPQSS Trigger: TGAGCTTTGAGGGAGGAATATGTGCTCCCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 90 bp | GAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGAGCTGCTGCTCACCTaGACTAGGGGAGCACATATTCCTCCCTCAAAGCTCAGGATGATG | + |
Preference number: 1 (lower is better) Translates to: EEEEEEEEVEELLLT*TRGAHIPPSKLRMM Trigger: CATCATCCTGAGCTTTGAGGGAGGAATATGTGCTCCCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCTCCTCCTCCTCCTCCTCCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 90 bp | AAACGGAACCTAGGTGTGGTGGGGCACATCTGCCATCCAGGCATTTaGGAAACAAAGGCAGGAACAGCAGGACTCAAAGCCATCCTCAGC | + |
Preference number: 1 (lower is better) Translates to: KRNLGVVGHICHPGI*ETKAGTAGLKAILS Trigger: GCTGAGGATGGCTTTGAGTCCTGCTGTTCCTGCCTTTGTTTCCCAAATGCCTGGATGGCAGATGTGCCCCACCACACCTAGGTTCCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 90 bp | GGTTCCTACTCAAACAAACGGAACCTAGGTGTGGTGGGGCACATCTaGCATCCAGGCATTTGGGAAACAAAGGCAGGAACAGCAGGACTC | + |
Preference number: 1 (lower is better) Translates to: GSYSNKRNLGVVGHI*HPGIWETKAGTAGL Trigger: GAGTCCTGCTGTTCCTGCCTTTGTTTCCCAAATGCCTGGATGGCAGATGTGCCCCACCACACCTAGGTTCCGTTTGTTTGAGTAGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 90 bp | GCAAGGTCTGAAAGACAGAGAACTCAGAACTCAGGAGACACAGACTaGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATGAG | + |
Preference number: 1 (lower is better) Translates to: ARSERQRTQNSGDTD*QDPLAEHMEDRSHE Trigger: CTCATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCCTGAGTTCTGAGTTCTCTGTCTTTCAGACCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | GAAGACAGAAGCCATGAGAATAGTTACAGCAGAGTTGGCAATGGCTaGGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAG | + |
Preference number: 1 (lower is better) Translates to: EDRSHENSYSRVGNG*EQGSHREPEDKHGE Trigger: CTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCATTGCCAACTCTGCTGTAACTATTCTCATGGCTTCTGTCTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | ACTGACATCTTCATCTTCAGAGTCTTCCTCTGCATCCGATTCCTCTaGCTCAGATTCCAACAGCAGCAAGAGCAGCTCAGAGTCCTCCAG | + |
Preference number: 1 (lower is better) Translates to: TDIFIFRVFLCIRFL*LRFQQQQEQLRVLQ Trigger: CTGGAGGACTCTGAGCTGCTCTTGCTGCTGTTGGAATCTGAGTCAGAGGAATCGGATGCAGAGGAAGACTCTGAAGATGAAGATGTCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 90 bp | CAGAGGGAGAGGATTGCTGTCCAGACCTGTTCTGCAAGTGCAGAGTaGTTCTCCAATCTTCCCTCATGTTTATGCAGCTTTGGTGGCAAT | + |
Preference number: 1 (lower is better) Translates to: QRERIAVQTCSASAE*FSNLPSCLCSFGGN Trigger: ATTGCCACCAAAGCTGCATAAACATGAGGGAAGATTGGAGAAGCACTCTGCACTTGCAGAACAGGTCTGGACAGCAATCCTCTCCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | ATGCTTCAGCCATTCTTTCAAGGATGGTTACCCCAAGACAGCCCATaGAATACCCGGTTTGTCATCAATTTCTTCACTTCCATGTCTCGG | + |
Preference number: 1 (lower is better) Translates to: MLQPFFQGWLPQDSP*NTRFVINFFTSMSR Trigger: CCGAGACATGGAAGTGAAGAAATTGATGACAAACCGGGTATTTCATGGGCTGTCTTGGGGTAACCATCCTTGAAAGAATGGCTGAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 90 bp | TGTTCTGCAAGTGCAGAGTGCTTCTCCAATCTTCCCTCATGTTTATaGAGCTTTGGTGGCAATAATCAACTCAAAAGTCCCACAGACTGG | + |
Preference number: 1 (lower is better) Translates to: CSASAECFSNLPSCL*SFGGNNQLKSPTDW Trigger: CCAGTCTGTGGGACTTTTGAGTTGATTATTGCCACCAAAGCTGCATAAACATGAGGGAAGATTGGAGAAGCACTCTGCACTTGCAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | ACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCCCCATCTCCTaGAAGAAGAAGCCCAGACTGCAAGGAATAACCCAGAGTTCTACA | + |
Preference number: 1 (lower is better) Translates to: TEKEISEMVLEIPIS*KKKPRLQGITQSST Trigger: TGTAGAACTCTGGGTTATTCCTTGCAGTCTGGGCTTCTTCTTTCAGGAGATGGGGATTTCCAGGACCATTTCCGATATCTCTTTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | AAAAACTGTCAAGGAACTCAGACCATTGCATACGTGTCACTTGAATaGACCCAAGGCATCTGGTTTATTGGGTCAGCTGCCAGCAGAAAA | + |
Preference number: 1 (lower is better) Translates to: KNCQGTQTIAYVSLE*TQGIWFIGSAASRK Trigger: TTTTCTGCTGGCAGCTGACCCAATAAACCAGATGCCTTGGGTTCATTCAAGTGACACGTATGCAATGGTCTGAGTTCCTTGACAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | GTCATTGTAGTACAGAAACCAGAAGCTGAACAAAGAAATCAGCACTaGCATCTTCATCTTCAGAGTCTTCCTCTGCATCCGATTCCTCTG | + |
Preference number: 1 (lower is better) Translates to: VIVVQKPEAEQRNQH*HLHLQSLPLHPIPL Trigger: CAGAGGAATCGGATGCAGAGGAAGACTCTGAAGATGAAGATGTCAGTGCTGATTTCTTTGTTCAGCTTCTGGTTTCTGTACTACAATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 90 bp | CATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTaGCAAAGGGCATGGCAGAGTGCTGTCTGTCAAGGTAAACACAAC | + |
Preference number: 1 (lower is better) Translates to: HKLVGYFIRALQSIA*QRAWQSAVCQGKHN Trigger: GTTGTGTTTACCTTGACAGACAGCACTCTGCCATGCCCTTTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 90 bp | GGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAAGGGCATaGCAGAGTGCTGTCTGTCAAGGTAAACACAACTTCAAAAAGAAA | + |
Preference number: 1 (lower is better) Translates to: GYFIRALQSIAWQRA*QSAVCQGKHNFKKK Trigger: TTTCTTTTTGAAGTTGTGTTTACCTTGACAGACAGCACTCTGCCATGCCCTTTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | ACAGAAGGATGGATTCAAGGACCAGTCTGTTATTCTGGAAGGACTTaGTTTAATGGAAGAGGACTATCAGTTTATACATATGCACCCCTT | + |
Preference number: 1 (lower is better) Translates to: TEGWIQGPVCYSGRT*FNGRGLSVYTYAPL Trigger: AAGGGGTGCATATGTATAAACTGATAGTCCTCTTCCATTAAATCAAGTCCTTCCAGAATAACAGACTGGTCCTTGAATCCATCCTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 90 bp | TATAGTAGTTTCATGGTTTTCCTATTGAAGTTCTTGGGATTGAACTaGGGCCTTGTGTACATGCTAAGCAAGTGTCCCAGTTTGTTTGTT | + |
Preference number: 1 (lower is better) Translates to: YSSFMVFLLKFLGLN*GLVYMLSKCPSLFV Trigger: AACAAACAAACTGGGACACTTGCTTAGCATGTACACAAGGCCCCAGTTCAATCCCAAGAACTTCAATAGGAAAACCATGAAACTACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | AGTAGCTGTTTCTGTCTTTGCAGAAATGAGCTCTTGGACATCTTTTaGGGTCTTGATATTAACAATATACAGAACACAGGATGTGACTGG | + |
Preference number: 1 (lower is better) Translates to: SSCFCLCRNELLDIF*GLDINNIQNTGCDW Trigger: CCAGTCACATCCTGTGTTCTGTATATTGTTAATATCAAGACCTCAAAAGATGTCCAAGAGCTCATTTCTGCAAAGACAGAAACAGCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 90 bp | TACAGCAGTCTGAGATTGACAGAAGAGTTCATTATACGATTAAAGTaGTGTTTGTTGTACAGAAGGATGGATTCAAGGACCAGTCTGTTA | + |
Preference number: 1 (lower is better) Translates to: YSSLRLTEEFIIRLK*CLLYRRMDSRTSLL Trigger: TAACAGACTGGTCCTTGAATCCATCCTTCTGTACAACAAACATCACTTTAATCGTATAATGAACTCTTCTGTCAATCTCAGACTGCTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 90 bp | GTTGCTAAGATGTTTGCTCACCTTTTATACACAGATTCACTTCCATaGAGTTTTCTCAAATGTATAAAGCTGAGTGAAGAGAACATGACA | + |
Preference number: 1 (lower is better) Translates to: VAKMFAHLLYTDSLP*SFLKCIKLSEENMT Trigger: TGTCATGTTCTCTTCACTCAGCTTTATACATTTGAGAAAACTCCATGGAAGTGAATCTGTGTATAAAAGGTGAGCAAACATCTTAGCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 90 bp | TGTATTGTAGCCACTATATCTTGTCATTCCTTCACAGCATATGTTTaGTTTAACAATGTGTTTTTCCAGTTGAAGACTGTTTGGGAAACA | + |
Preference number: 1 (lower is better) Translates to: CIVATISCHSFTAYV*FNNVFFQLKTVWET Trigger: TGTTTCCCAAACAGTCTTCAACTGGAAAAACACATTGTTAAAGCAAACATATGCTGTGAAGGAATGACAAGATATAGTGGCTACAATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGGTGGTGGGGCACATCTaGCATCCAGGCATTTGGGAA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREVVGHI*HPGIWE Trigger: TTCCCAAATGCCTGGATGGCAGATGTGCCCCACCAC...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAGTGGTGGGGCACATCTaGCATCCAGGCATTTGGGAA | + |
Preference number: 2 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRVVGHI*HPGIWE Trigger: TTCCCAAATGCCTGGATGGCAGATGTGCCCCACCAC...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCAACAGGTGTCAGAATaGTGCCAAGAGACGCTGGGA | + |
Preference number: 2 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHQQVSE*CQETLG Trigger: TCCCAGCGTCTCTTGGCACCATTCTGACACCTGTTG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCAGGTGTCAGAATGGTaGCAAGAGACGCTGGGAAAA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREQVSEW*QETLGK Trigger: TTTTCCCAGCGTCTCTTGGCACCATTCTGACACCTG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCAGCAGAGTTGGCAATaGCTGAGAACAAGGCTCACA | + |
Preference number: 2 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHQQSWQ*LRTRLT Trigger: TGTGAGCCTTGTTCTCAGCCATTGCCAACTCTGCTG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGTGCCATCCAGGCATTTaGGAAACAAAGGCAGGAACA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVRECHPGI*ETKAGT Trigger: TGTTCCTGCCTTTGTTTCCCAAATGCCTGGATGGCA...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGACAGCAGAGTTGGCAATaGCTGAGAACAAGGCTCACA | + |
Preference number: 2 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRQQSWQ*LRTRLT Trigger: TGTGAGCCTTGTTCTCAGCCATTGCCAACTCTGCTG...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGGCTATATTGGAAATATaGGGCCAGATTGGGCTACAG | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREAILEI*GQIGLQ Trigger: CTGTAGCCCAATCTGGCCTCATATTTCCAATATAGC...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCATTTCTTTGTGTTTTaGAGGCCAGCTTTCCTCAGG | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREHFFVF*RPAFLR Trigger: CCTGAGGAAAGCTGGCCTTCAAAACACAAAGAAATG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAGTCCTAACTAGACTGTaGGGACCCACAGCTTCTATT | + |
Preference number: 2 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRVLTRL*GPTASI Trigger: AATAGAAGCTGTGGGTCCTCACAGTCTAGTTAGGAC...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTAGGTGGAGGAGCTGCTaGTCACCTGCACTAGGGGAG | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSRWRSC*SPALGE Trigger: CTCCCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTAGGAGGTGGAGGAGCTaGTGCTCACCTGCACTAGGG | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSRRWRS*CSPALG Trigger: CCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCTCCT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 90 bp | CAGAGCACATGGAAGACAGAAGCCATGAGAATAGTTACAGCAGAGTaGGCAATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACA | + |
Preference number: 2 (lower is better) Translates to: QSTWKTEAMRIVTAE*AMAENKAHTESQKT Trigger: TGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCATTGCCAACTCTGCTGTAACTATTCTCATGGCTTCTGTCTTCCATGTGCTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAACAGTACAGTTATCTTaGAATGCACACCTGTTAGGC | + |
Preference number: 2 (lower is better) Translates to: MAENKAHTESQKTSMASQTVQLS*NAHLLG Trigger: GCCTAACAGGTGTGCATTTCAAGATAACTGTACTGT...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATACAGTACAGTTATCTTaGAATGCACACCTGTTAGGC | + |
Preference number: 2 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHTVQLS*NAHLLG Trigger: GCCTAACAGGTGTGCATTTCAAGATAACTGTACTGT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCAGTGGTCTTTTCCCTaGATGGAATTTGGTTTGTCA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREQWSFP*MEFGLS Trigger: TGACAAACCAAATTCCATTCAGGGAAAAGACCACTG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGTCCCTGAATGGAATTTaGTTTGTCAGCAAGGACTAC | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVRESLNGI*FVSKDY Trigger: GTAGTCCTTGCTGACAAACCAAATTCCATTCAGGGA...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAATGTGTTTTTCCAGTTaGAGACTGTTTGGGAAACAG | + |
Preference number: 2 (lower is better) Translates to: MAENKAHTESQKTSMASQMCFSS*RLFGKQ Trigger: CTGTTTCCCAAACAGTCTTCAACTGGAAAAACACAT...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAGGCCTCATATGGAAATaGGGTAAACTTTGTGGCAAA | + |
Preference number: 2 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRGLIWK*GKLCGK Trigger: TTTGCCACAAAGTTTACCTCATTTCCATATGAGGCC...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGGAGAAAGGACATTTCTaGGCTAGAGGGATTAATAAG | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREEKGHF*ARGINK Trigger: CTTATTAATCCCTCTAGCTCAGAAATGTCCTTTCTC...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATTTGCAAAGAACCACATaGCTTTCAGCTAAAGGACAT | + |
Preference number: 2 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHLQRTT*LSAKGH Trigger: ATGTCCTTTAGCTGAAAGTCATGTGGTTCTTTGCAA...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGAGGAGGTGGAGGAGCTaGTGCTCACCTGCACTAGGG | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKERRWRS*CSPALG Trigger: CCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCTCCT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCAGTGTGCTGCCATTTaGTACCTACTAATAGTAACA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREQCAAI*YLLIVT Trigger: TGTTACTATTAGTAGGTACCAAATGGCAGCACACTG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGGGTCTTTTCCCTGAATaGAATTTGGTTTGTCAGCAA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREGLFPE*NLVCQQ Trigger: TTGCTGACAAACCAAATTCCATTCAGGGAAAAGACC...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATAATATGAGGCCAGATTaGGCTACAGGAAAATTTGTC | + |
Preference number: 2 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHNMRPD*ATGKFV Trigger: GACAAATTTTCCTGTAGCCCAATCTGGCCTCATATT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCATCCTCAGCTATATTaGAAATATGAGGCCAGATTG | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVREHPQLY*KYEARL Trigger: CAATCTGGCCTCATATTTCCAATATAGCTGAGGATG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGACAGTTATCTTGAAATaGACACCTGTTAGGCAATCA | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVRETVILK*TPVRQS Trigger: TGATTGCCTAACAGGTGTGCATTTCAAGATAACTGT...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCTACCAGAAGTTGTTTaGAAAGAACCACATGACTTT | + |
Preference number: 2 (lower is better) Translates to: TQRARRQAWRAKEEAVRELPEVV*KEPHDF Trigger: AAAGTCATGTGGTTCTTTGCAAACAACTTCTGGTAG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTCAGAGGGAGAGGATTaGTGTCCAGACCTGTTCTGC | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSSEGED*CPDLFC Trigger: GCAGAACAGGTCTGGACAGCAATCCTCTCCCTCTGA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGAGCTGCTGCTCACCTaGACTAGGGGAGCACATATT | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYELLLT*TRGAHI Trigger: AATATGTGCTCCCCTAGTGCAGGTGAGCAGCAGCTC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAAGGTGGAGGAGCTGCTaGTCACCTGCACTAGGGGAG | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQRWRSC*SPALGE Trigger: CTCCCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAACAGTTGAAGACTGTTTaGGAAACAGTACAGTTATCT | + |
Preference number: 2 (lower is better) Translates to: MAENKAHTESQKTSMASQQLKTV*ETVQLS Trigger: AGATAACTGTACTGTTTCCCAAACAGTCTTCAACTG...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCTTAGTAATACCATCTaGTATTCCAGAAGGGAAGAT | + |
Preference number: 2 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHLSNTI*YSRRED Trigger: ATCTTCCCTTCTGGAATACCAGATGGTATTACTAAG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTCAGGTGTCAGAATGGTaGCAAGAGACGCTGGGAAAA | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSQVSEW*QETLGK Trigger: TTTTCCCAGCGTCTCTTGGCACCATTCTGACACCTG...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACTCCTCCTCCTCCTCTaGCAGTCAGAGATCTGCCTC | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQLLLLL*QSEICL Trigger: GAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGGAG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 90 bp | AACCAAAATGTGGCATATGAAGCTCTGTGCTTGGAGATGCTCACTTaGCTCGTAGAGAGACCAACAGATGACAGTGTTGAAGTGGTATCA | + |
Preference number: 2 (lower is better) Translates to: NQNVAYEALCLEMLT*LVERPTDDSVEVVS Trigger: TGATACCACTTCAACACTGTCATCTGTTGGTCTCTCTACGAGCAAAGTGAGCATCTCCAAGCACAGAGCTTCATATGCCACATTTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGATCACAGAGAGACTTaGGACCAGAAATGGGTTCCT | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSDHRET*DQKWVP Trigger: AGGAACCCATTTCTGGTCTCAAGTCTCTCTGTGATC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGACCTGTTCTGCAAGTaGAGAGTGCTTCTCCAATCT | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYDLFCK*RVLLQS Trigger: AGATTGGAGAAGCACTCTGCACTTGCAGAACAGGTC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCTCCTCCTCCTCCTCTaGCAGTCAGAGATCTGCCTC | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDLLLLL*QSEICL Trigger: GAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGGAG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACATGAAGCTCTGTGCTTaGAGATGCTCACTTTGCTCG | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYMKLCA*RCSLCS Trigger: CGAGCAAAGTGAGCATCTCCAAGCACAGAGCTTCAT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACCATGTCTCGGAGGTTTaGCTGATGAACTTTGAGAAC | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYHVSEV*LMNFEN Trigger: GTTCTCAAAGTTCATCAGTCAAACCTCCGAGACATG...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGGCGAGGTTAAAGGATaGAATGCTTCAGCCATTCTT | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYGEVKG*NASAIL Trigger: AAGAATGGCTGAAGCATTTCATCCTTTAACCTCGCC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGTGCACACAAGTTGCTaGAAATGGAGTTTGCTGAGA | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSVHTSC*KWSLLR Trigger: TCTCAGCAAACTCCATTTTCAGCAACTTGTGTGCAC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTGTCCAGACCTGTTCTaGAAGTGCAGAGTGCTTCTC | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKECPDLF*KCRVLL Trigger: GAGAAGCACTCTGCACTTGCAGAACAGGTCTGGACA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCGAGCTGCTGCTCACCTaGACTAGGGGAGCACATATT | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIELLLT*TRGAHI Trigger: AATATGTGCTCCCCTAGTGCAGGTGAGCAGCAGCTC...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACAACAGGTGTCAGAATaGTGCCAAGAGACGCTGGGA | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQQQVSE*CQETLG Trigger: TCCCAGCGTCTCTTGGCACCATTCTGACACCTGTTG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTATCGGAAATGGTCCTaGAAATCCCCATCTCCTGAA | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYYRKWS*KSPSPE Trigger: TTCAGGAGATGGGGATTTCCAGGACCATTTCCGATA...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 90 bp | CAAGTGCAGAGTGCTTCTCCAATCTTCCCTCATGTTTATGCAGCTTaGGTGGCAATAATCAACTCAAAAGTCCCACAGACTGGAAAATTA | + |
Preference number: 2 (lower is better) Translates to: QVQSASPIFPHVYAA*VAIINSKVPQTGKL Trigger: TAATTTTCCAGTCTGTGGGACTTTTGAGTTGATTATTGCCACCAAAGCTGCATAAACATGAGGGAAGATTGGAGAAGCACTCTGCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACCTGAAATATTTCTGCTaGCAAGGAAGCCATAGAGGT | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYLKYFC*QGSHRG Trigger: ACCTCTATGGCTTCCTTGTCAGCAGAAATATTTCAG...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTCTGAAATATTTCTGCTaGCAAGGAAGCCATAGAGGT | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSLKYFC*QGSHRG Trigger: ACCTCTATGGCTTCCTTGTCAGCAGAAATATTTCAG...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTCAGTGGTCTTTTCCCTaGATGGAATTTGGTTTGTCA | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSQWSFP*MEFGLS Trigger: TGACAAACCAAATTCCATTCAGGGAAAAGACCACTG...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGGATCACAGAGAGACTTaGGACCAGAAATGGGTTCCT | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEDHRET*DQKWVP Trigger: AGGAACCCATTTCTGGTCTCAAGTCTCTCTGTGATC...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCAAGGGAGAGGAGTTaGAAGCATTCTGACCATAAA | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYSRERS*KHSDHK Trigger: TTTATGGTCAGAATGCTTTCAACTCCTCTCCCTTGA...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAGAAATCCCCATCTCCTaGAAGAAGAAGCCCAGACTG | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQEIPIS*KKKPRL Trigger: CAGTCTGGGCTTCTTCTTTCAGGAGATGGGGATTTC...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACAAGATGTCTACAGTGTaGTGCCATTTGGTACCTACT | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYKMSTV*CHLVPT Trigger: AGTAGGTACCAAATGGCAGCACACTGTAGACATCTT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTCTGCAAGTGCAGAGTaGTTCTCCAATCTTCCCTCA | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKESASAE*FSNLPS Trigger: TGAGGGAAGATTGGAGAAGCACTCTGCACTTGCAGA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTGCCATCCAGGCATTTaGGAAACAAAGGCAGGAACA | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKECHPGI*ETKAGT Trigger: TGTTCCTGCCTTTGTTTCCCAAATGCCTGGATGGCA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTGTTGTACAGAAGGATaGATTCAAGGACCAGTCTGT | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSCCTEG*IQGPVC Trigger: ACAGACTGGTCCTTGAATCCATCCTTCTGTACAACA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTTGCAAAGAACCACATaGCTTTCAGCTAAAGGACAT | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSLQRTT*LSAKGH Trigger: ATGTCCTTTAGCTGAAAGTCATGTGGTTCTTTGCAA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGGCTATATTGGAAATATaGGGCCAGATTGGGCTACAG | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEAILEI*GQIGLQ Trigger: CTGTAGCCCAATCTGGCCTCATATTTCCAATATAGC...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAGTCCTAACTAGACTGTaGGGACCCACAGCTTCTATT | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQVLTRL*GPTASI Trigger: AATAGAAGCTGTGGGTCCTCACAGTCTAGTTAGGAC...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATTGCATCCGATTCCTCTaGCTCAGATTCCAACAGCAG | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDCIRFL*LRFQQQ Trigger: CTGCTGTTGGAATCTGAGTCAGAGGAATCGGATGCA...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGCCAAAATGTGGCATATaGAGCTCTGTGCTTGGAGAT | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEPKCGI*SSVLGD Trigger: ATCTCCAAGCACAGAGCTTCATATGCCACATTTTGG...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAGCTGCCAGCAGAAAATaGAAAGTAGTGTGGCACACA | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQAASRK*KVVWHT Trigger: TGTGTGCCACACTACTTTTCATTTTCTGCTGGCAGC...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTTATTGTTGGCTTTGTaGAGGCCTCATATGGAAATG | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSLLLAL*RPHMEM Trigger: CATTTCCATATGAGGCCTGCACAAAGCCAACAATAA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATTCATACCACTGGAGTaGCTCCCCAGAAGACAGATA | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQFIPLE*LPRRQI Trigger: TATCTGTCTTCTGGGGAGGCACTCCAGTGGTATGAA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGCCATAGAGGTTGTGTaGCAACAGTGTAAAATCAAA | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYAIEVV*QQCKIK Trigger: TTTGATTTTACACTGTTGCCACACAACCTCTATGGC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACCATTCTTTCAAGGATaGTTACCCCAAGACAGCCCA | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQPFFQG*LPQDSP Trigger: TGGGCTGTCTTGGGGTAACCATCCTTGAAAGAATGG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR CAA 90 bp | ATATGTTTCCATTATAGTAGTTTCATGGTTTTCCTATTGAAGTTCTaGGGATTGAACTGGGGCCTTGTGTACATGCTAAGCAAGTGTCCC | + |
Preference number: 2 (lower is better) Translates to: ICFHYSSFMVFLLKF*GLNWGLVYMLSKCP Trigger: GGGACACTTGCTTAGCATGTACACAAGGCCCCAGTTCAATCCCAAGAACTTCAATAGGAAAACCATGAAACTACTATAATGGAAACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACTTAATCTAGATGTTTaGGCTTCTGTGGCTCAGTGG | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQLNLDV*ASVAQW Trigger: CCACTGAGCCACAGAAGCTCAAACATCTAGATTAAG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGGAAGTGTCTTAAACTaGAGCAGTTTAAAGAGAAAC | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSGSVLN*SSLKRN Trigger: GTTTCTCTTTAAACTGCTTCAGTTTAAGACACTTCC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGACAGAAACCAGAAGCTaGACAAAGAAATCAGCACTG | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKETETRS*TKKSAL Trigger: CAGTGCTGATTTCTTTGTTCAGCTTCTGGTTTCTGT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTAACTTTGAGAACATCTaGAAAAATATGCCCGTGTCA | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSNFENI*KNMPVS Trigger: TGACACGGGCATATTTTTTCAGATGTTCTCAAAGTT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACATGTATAAAGCTGAGTaGAGAGAACATGACATCATC | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYMYKAE*REHDII Trigger: GATGATGTCATGTTCTCTTCACTCAGCTTTATACAT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGAAGAACTCTGCAACATaGTACTTGATTGCTGTGCTC | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEKNSAT*YLIAVL Trigger: GAGCACAGCAATCAAGTATCATGTTGCAGAGTTCTT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTTATTTTATGGAAAGTaGAGAGACGAAGAACAAGGC | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSLFYGK*RDEEQG Trigger: GCCTTGTTCTTCGTCTCTTCACTTTCCATAAAATAA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTATTCTGGAAGGACTTaGTTTAATGGAAGAGGACTA | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSYSGRT*FNGRGL Trigger: TAGTCCTCTTCCATTAAATCAAGTCCTTCCAGAATA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGCAAATTTGTCTGACTaGTTCAAAATTTGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSANLSD*FKICGT Trigger: TGTGCCACAAATTTTGAAGCAGTCAGACAAATTTGC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCATGTTTGAGCTTCTGTaGCTCAGTGGTCTTTTCCCT | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIMFELL*LSGLFP Trigger: AGGGAAAAGACCACTGAGCCACAGAAGCTCAAACAT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATACATATGCACCCCTTaGAGGATGACTACAATCCAG | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQYICTP*RMTTIQ Trigger: CTGGATTGTAGTCATCCTCCAAGGGGTGCATATGTA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATATGAAGCTCTGTGCTTaGAGATGCTCACTTTGCTCG | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDMKLCA*RCSLCS Trigger: CGAGCAAAGTGAGCATCTCCAAGCACAGAGCTTCAT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAAACAATCAGGCTAAGTaGCTGAACACTCCTCCACAA | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQNNQAK*LNTPPQ Trigger: TTGTGGAGGAGTGTTCAGCCACTTAGCCTGATTGTT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCTTAATCTAGATGTTTaGGCTTCTGTGGCTCAGTGG | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDLNLDV*ASVAQW Trigger: CCACTGAGCCACAGAAGCTCAAACATCTAGATTAAG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATCAAGGGAGAGGAGTTaGAAGCATTCTGACCATAAA | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQSRERS*KHSDHK Trigger: TTTATGGTCAGAATGCTTTCAACTCCTCTCCCTTGA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATTGGGTCTTCCTAAACTaGATGGCGAGGTTAAAGGAT | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDWVFLN*MARLKD Trigger: ATCCTTTAACCTCGCCATTCAGTTTAGGAAGACCCA...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAAGAACTCTGCAACATaGTACTTGATTGCTGTGCTC | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIKNSAT*YLIAVL Trigger: GAGCACAGCAATCAAGTATCATGTTGCAGAGTTCTT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGGAAAATGGAGTTTGCTaGGAGCCAAACAAAAGAACT | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEENGVC*EPNKRT Trigger: AGTTCTTTTGTTTGGCTCTCAGCAAACTCCATTTTC...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACTGTCTTTGCAGAAATaGGCTCTTGGACATCTTTTG | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQLSLQK*ALGHLL Trigger: CAAAAGATGTCCAAGAGCTCATTTCTGCAAAGACAG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTTATTGTTGGCTTTGTaGAGGCCTCATATGGAAATG | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKELLLAL*RPHMEM Trigger: CATTTCCATATGAGGCCTGCACAAAGCCAACAATAA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAAGATGTCTACAGTGTaGTGCCATTTGGTACCTACT | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIKMSTV*CHLVPT Trigger: AGTAGGTACCAAATGGCAGCACACTGTAGACATCTT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACAAAAATTCCAGTGTCTaGCACAGAATCTTTCCTATA | + |
Preference number: 2 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYKNSSV*HRIFPI Trigger: TATAGGAAAGATTCTGTGGCAGACACTGGAATTTTT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATCCCTGAATGGAATTTaGTTTGTCAGCAAGGACTAC | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQSLNGI*FVSKDY Trigger: GTAGTCCTTGCTGACAAACCAAATTCCATTCAGGGA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGAATATGAGGCCAGATTaGGCTACAGGAAAATTTGTC | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKENMRPD*ATGKFV Trigger: GACAAATTTTCCTGTAGCCCAATCTGGCCTCATATT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACTTCCTCAAGGAGTGTaGTCTCAAATTAATCCACGT | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQLPQGV*SQINPR Trigger: ACGTGGATTAATTTGAGACCACACTCCTTGAGGAAG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTTATTAACCAAAATGTaGCATATGAAGCTCTGTGCT | + |
Preference number: 2 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSLLTKM*HMKLCA Trigger: AGCACAGAGCTTCATATGCCACATTTTGGTTAATAA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCATGTGTTTTTCCAGTTaGAGACTGTTTGGGAAACAG | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIMCFSS*RLFGKQ Trigger: CTGTTTCCCAAACAGTCTTCAACTGGAAAAACACAT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGGGAAGTGTCTTAAACTaGAGCAGTTTAAAGAGAAAC | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEGSVLN*SSLKRN Trigger: GTTTCTCTTTAAACTGCTTCAGTTTAAGACACTTCC...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCCCAAAGAAGAAGCGGTaGGAGAGAAAAGATTTCTTT | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIPKKKR*ERKDFF Trigger: AAAGAAATCTTTTCTCTCTCACCGCTTCTTCTTTGG...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAATGTCTACAGTGTGCTaGCATTTGGTACCTACTAAT | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQMSTVC*HLVPTN Trigger: ATTAGTAGGTACCAAATGGCAGCACACTGTAGACAT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGGCAAATTTGTCTGACTaGTTCAAAATTTGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEANLSD*FKICGT Trigger: TGTGCCACAAATTTTGAAGCAGTCAGACAAATTTGC...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCCAGTGTGCTGCCATTTaGTACCTACTAATAGTAACA | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIQCAAI*YLLIVT Trigger: TGTTACTATTAGTAGGTACCAAATGGCAGCACACTG...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCGCCATAGAGGTTGTGTaGCAACAGTGTAAAATCAAA | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIAIEVV*QQCKIK Trigger: TTTGATTTTACACTGTTGCCACACAACCTCTATGGC...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCCATCCTCAGCTATATTaGAAATATGAGGCCAGATTG | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIHPQLY*KYEARL Trigger: CAATCTGGCCTCATATTTCCAATATAGCTGAGGATG...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 90 bp | AGGACTCAAAGCCATCCTCAGCTATATTGGAAATATGAGGCCAGATaGGGCTACAGGAAAATTTGTCTTAATCCTCCATATAATAAAATA | + |
Preference number: 2 (lower is better) Translates to: RTQSHPQLYWKYEAR*GYRKICLNPPYNKI Trigger: TATTTTATTATATGGAGGATTAAGACAAATTTTCCTGTAGCCCAATCTGGCCTCATATTTCCAATATAGCTGAGGATGGCTTTGAGTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 90 bp | TTCAAGGAACAGTACTACACCATCCTTCGCTTAGAGACAAACAAATaGAGAAATGTTGCTAAGATGTTTGCTCACCTTTTATACACAGAT | + |
Preference number: 2 (lower is better) Translates to: FKEQYYTILRLETNK*RNVAKMFAHLLYTD Trigger: ATCTGTGTATAAAAGGTGAGCAAACATCTTAGCAACATTTCTCAATTTGTTTGTCTCTAAGCGAAGGATGGTGTAGTACTGTTCCTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 90 bp | CTTGATTTAATGGAAGAGGACTATCAGTTTATACATATGCACCCCTaGGAGGATGACTACAATCCAGAACATGTTCTTAATGTTTTCAAG | + |
Preference number: 2 (lower is better) Translates to: LDLMEEDYQFIHMHP*EDDYNPEHVLNVFK Trigger: CTTGAAAACATTAAGAACATGTTCTGGATTGTAGTCATCCTCCAAGGGGTGCATATGTATAAACTGATAGTCCTCTTCCATTAAATCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAAGGACATGATTAGCTaGCTACTGAAATATTTCTGC | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEIKDMIS*LLKYFC Trigger: GCAGAAATATTTCAGTAGTCAGCTAATCATGTCCTT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAATGTATAAAGCTGAGTaGAGAGAACATGACATCATC | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQMYKAE*REHDII Trigger: GATGATGTCATGTTCTCTTCACTCAGCTTTATACAT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATTTAGCTTCACTGAATaGGGAAGGTACCTTCTTTTT | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQFSFTE*GRYLLF Trigger: AAAAAGAAGGTACCTTCCTCATTCAGTGAAGCTAAA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCACAGTTATCTTGAAATaGACACCTGTTAGGCAATCA | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEITVILK*TPVRQS Trigger: TGATTGCCTAACAGGTGTGCATTTCAAGATAACTGT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCCTACCAGAAGTTGTTTaGAAAGAACCACATGACTTT | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEILPEVV*KEPHDF Trigger: AAAGTCATGTGGTTCTTTGCAAACAACTTCTGGTAG...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAACATGATACTTGATTaGTGTGCTCAACAAAAGACC | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEINMILD*CAQQKT Trigger: GGTCTTTTGTTGAGCACAGCAATCAAGTATCATGTT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTGGATCCTTATTTTATaGAAAGTGAAGAGACGAAGA | + |
Preference number: 2 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEWILIL*KVKRRR Trigger: TCTTCGTCTCTTCACTTTCCATAAAATAAGGATCCA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATATTTCCTTTGGGACTaGCTATATAACACCACCATT | + |
Preference number: 2 (lower is better) Translates to: GHKLVGYFIRALQSIAWQYFLWD*LYNTTI Trigger: AATGGTGGTGTTATATAGCCAGTCCCAAAGGAAATA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATAAGGACATGATTAGCTaGCTACTGAAATATTTCTGC | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDKDMIS*LLKYFC Trigger: GCAGAAATATTTCAGTAGTCAGCTAATCATGTCCTT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATAACTTTGAGAACATCTaGAAAAATATGCCCGTGTCA | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDNFENI*KNMPVS Trigger: TGACACGGGCATATTTTTTCAGATGTTCTCAAAGTT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCAGTTGAAGACTGTTTaGGAAACAGTACAGTTATCT | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDQLKTV*ETVQLS Trigger: AGATAACTGTACTGTTTCCCAAACAGTCTTCAACTG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAATCAATGCAATCTTTaGACTCCTGTGAAACATTCT | + |
Preference number: 2 (lower is better) Translates to: VGIEKNTEKEISEMVLEINQCNL*TPVKHS Trigger: AGAATGTTTCACAGGAGTCCAAAGATTGCATTGATT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATAAAAGTCCCACAGACTaGAAAATTAATCCTCAAGAG | + |
Preference number: 2 (lower is better) Translates to: QEQIVDKNILVYRRIIWDKSPTD*KINPQE Trigger: CTCTTGAGGATTAATTTTCCAGTCTGTGGGACTTTT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 72 bp | GAGGAGGAGGAGGAGGTGGAGGAGCTGCTGCTCACCTaGACTAGGGGAGCACATATTCCTCCCTCAAAGCTC | + |
Preference number: 3 (lower is better) Translates to: EEEEEVEELLLT*TRGAHIPPSKL Trigger: GAGCTTTGAGGGAGGAATATGTGCTCCCCTAGTGCAGGTGAGCAGCAGCTCCTCCACCTCCTCCTCCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | CTAGGTGTGGTGGGGCACATCTGCCATCCAGGCATTTaGGAAACAAAGGCAGGAACAGCAGGACTCAAAGCC | + |
Preference number: 3 (lower is better) Translates to: LGVVGHICHPGI*ETKAGTAGLKA Trigger: GGCTTTGAGTCCTGCTGTTCCTGCCTTTGTTTCCCAAATGCCTGGATGGCAGATGTGCCCCACCACACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 72 bp | TCAAACAAACGGAACCTAGGTGTGGTGGGGCACATCTaGCATCCAGGCATTTGGGAAACAAAGGCAGGAACA | + |
Preference number: 3 (lower is better) Translates to: SNKRNLGVVGHI*HPGIWETKAGT Trigger: TGTTCCTGCCTTTGTTTCCCAAATGCCTGGATGGCAGATGTGCCCCACCACACCTAGGTTCCGTTTGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | GATGACAACAGGTGTCAGAATGGTGCCAAGAGACGCTaGGAAAAGCCTAGCAGATGCCCTGAACATTCTAGA | + |
Preference number: 3 (lower is better) Translates to: DDNRCQNGAKRR*EKPSRCPEHSR Trigger: TCTAGAATGTTCAGGGCATCTGCTAGGCTTTTCCCAGCGTCTCTTGGCACCATTCTGACACCTGTTGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGACAGTGTGCTGCCATTaGGTACCTACTAATAGTAAC | + |
Preference number: 3 (lower is better) Translates to: TQRARRQAWRAKEEAVRETVCCH*VPTNSN Trigger: GTTACTATTAGTAGGTACCAAATGGCAGCACACTGT...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAAGGACTACCAGAAGTaGTTTGCAAAGAACCACATG | + |
Preference number: 3 (lower is better) Translates to: MAENKAHTESQKTSMASQKDYQK*FAKNHM Trigger: CATGTGGTTCTTTGCAAACAACTTCTGGTAGTCCTT...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATTTCCCTGAATGGAATTaGGTTTGTCAGCAAGGACTA | + |
Preference number: 3 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHFPEWN*VCQQGL Trigger: TAGTCCTTGCTGACAAACCAAATTCCATTCAGGGAA...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATACAGGAGACATTTCTTaGTGTTTTGAAGGCCAGCTT | + |
Preference number: 3 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHTGDIS*CFEGQL Trigger: AAGCTGGCCTTCAAAACACAAAGAAATGTCTCCTGT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | AGCCATGAGAATAGTTACAGCAGAGTTGGCAATGGCTaGGAACAAGGCTCACACAGAGAGCCAGAAGACAAG | + |
Preference number: 3 (lower is better) Translates to: SHENSYSRVGNG*EQGSHREPEDK Trigger: CTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCATTGCCAACTCTGCTGTAACTATTCTCATGGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | CAAGGAACTCAGACCATTGCATACGTGTCACTTGAATaGACCCAAGGCATCTGGTTTATTGGGTCAGCTGCC | + |
Preference number: 3 (lower is better) Translates to: QGTQTIAYVSLE*TQGIWFIGSAA Trigger: GGCAGCTGACCCAATAAACCAGATGCCTTGGGTTCATTCAAGTGACACGTATGCAATGGTCTGAGTTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAACAGTACAGTTATCTaGAAATGCACACCTGTTAGG | + |
Preference number: 3 (lower is better) Translates to: MAENKAHTESQKTSMASQNSTVI*KCTPVR Trigger: CCTAACAGGTGTGCATTTCAAGATAACTGTACTGTT...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGTGTAGCCACTATATCTaGTCATTCCTTCACAGCATA | + |
Preference number: 3 (lower is better) Translates to: TQRARRQAWRAKEEAVRECSHYI*SFLHSI Trigger: TATGCTGTGAAGGAATGACAAGATATAGTGGCTACA...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAATTTTTGACATTATTGTaGGCTTTGTGCAGGCCTCAT | + |
Preference number: 3 (lower is better) Translates to: MAENKAHTESQKTSMASQFLTLL*ALCRPH Trigger: ATGAGGCCTGCACAAAGCCAACAATAATGTCAAAAA...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAACATTTCTTTGTGTTTaGAAGGCCAGCTTTCCTCAG | + |
Preference number: 3 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRTFLCV*KASFPQ Trigger: CTGAGGAAAGCTGGCCTTCAAAACACAAAGAAATGT...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGTCAGAGGGAGAGGATaGCTGTCCAGACCTGTTCTG | + |
Preference number: 3 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSVRGRG*LSRPVL Trigger: CAGAACAGGTCTGGACAGCAATCCTCTCCCTCTGAC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAAACAGTACAGTTATCTaGAAATGCACACCTGTTAGG | + |
Preference number: 3 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRNSTVI*KCTPVR Trigger: CCTAACAGGTGTGCATTTCAAGATAACTGTACTGTT...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | CTGTCAAGGAACTCAGACCATTGCATACGTGTCACTTaGATGAACCCAAGGCATCTGGTTTATTGGGTCAGC | + |
Preference number: 3 (lower is better) Translates to: LSRNSDHCIRVT*MNPRHLVYWVS Trigger: GCTGACCCAATAAACCAGATGCCTTGGGTTCATTCAAGTGACACGTATGCAATGGTCTGAGTTCCTTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 72 bp | AGGATTGCTGTCCAGACCTGTTCTGCAAGTGCAGAGTaGTTCTCCAATCTTCCCTCATGTTTATGCAGCTTT | + |
Preference number: 3 (lower is better) Translates to: RIAVQTCSASAE*FSNLPSCLCSF Trigger: AAAGCTGCATAAACATGAGGGAAGATTGGAGAAGCACTCTGCACTTGCAGAACAGGTCTGGACAGCAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | GTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTaGCAAAGGGCATGGCAGAGTGCTGTCTGTCAAGGT | + |
Preference number: 3 (lower is better) Translates to: VGYFIRALQSIA*QRAWQSAVCQG Trigger: ACCTTGACAGACAGCACTCTGCCATGCCCTTTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTAGATCACAGAGAGACTaGAGACCAGAAATGGGTTCC | + |
Preference number: 3 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSRSQRD*RPEMGS Trigger: GGAACCCATTTCTGGTCTCAAGTCTCTCTGTGATCT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | CCATTCTTTCAAGGATGGTTACCCCAAGACAGCCCATaGAATACCCGGTTTGTCATCAATTTCTTCACTTCC | + |
Preference number: 3 (lower is better) Translates to: PFFQGWLPQDSP*NTRFVINFFTS Trigger: GGAAGTGAAGAAATTGATGACAAACCGGGTATTTCATGGGCTGTCTTGGGGTAACCATCCTTGAAAGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | AGGAACAGCAGGACTCAAAGCCATCCTCAGCTATATTaGAAATATGAGGCCAGATTGGGCTACAGGAAAATT | + |
Preference number: 3 (lower is better) Translates to: RNSRTQSHPQLY*KYEARLGYRKI Trigger: AATTTTCCTGTAGCCCAATCTGGCCTCATATTTCCAATATAGCTGAGGATGGCTTTGAGTCCTGCTGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | TTCATGGTTTTCCTATTGAAGTTCTTGGGATTGAACTaGGGCCTTGTGTACATGCTAAGCAAGTGTCCCAGT | + |
Preference number: 3 (lower is better) Translates to: FMVFLLKFLGLN*GLVYMLSKCPS Trigger: ACTGGGACACTTGCTTAGCATGTACACAAGGCCCCAGTTCAATCCCAAGAACTTCAATAGGAAAACCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | ATTAGAGCATTACAAAGCATAGCTTGGCAAAGGGCATaGCAGAGTGCTGTCTGTCAAGGTAAACACAACTTC | + |
Preference number: 3 (lower is better) Translates to: IRALQSIAWQRA*QSAVCQGKHNF Trigger: GAAGTTGTGTTTACCTTGACAGACAGCACTCTGCCATGCCCTTTGCCAAGCTATGCTTTGTAATGCTCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACATAGTTACAGCAGAGTaGGCAATGGCTGAGAACAAG | + |
Preference number: 3 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYIVTAE*AMAENK Trigger: CTTGTTCTCAGCCATTGCCAACTCTGCTGTAACTAT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACCAACAGATGACAGTGTaGAAGTGGTATCAGCTTCCT | + |
Preference number: 3 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYQQMTV*KWYQLP Trigger: AGGAAGCTGATACCACTTCAACACTGTCATCTGTTG...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACACAGGAGACATTTCTTaGTGTTTTGAAGGCCAGCTT | + |
Preference number: 3 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYTGDIS*CFEGQL Trigger: AAGCTGGCCTTCAAAACACAAAGAAATGTCTCCTGT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGAATGTGCACACAAGTaGCTGAAAATGGAGTTTGCT | + |
Preference number: 3 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYECAHK*LKMEFA Trigger: AGCAAACTCCATTTTCAGCAACTTGTGTGCACATTC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | TCACAAAGGGGAATCAATGCAATCTTTGGACTCCTGTaGAACATTCTACAGCAGTCTGAGATTGACAGAAGA | + |
Preference number: 3 (lower is better) Translates to: SQRGINAIFGLL*NILQQSEIDRR Trigger: TCTTCTGTCAATCTCAGACTGCTGTAGAATGTTTCACAGGAGTCCAAAGATTGCATTGATTCCCCTTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAAGATCACAGAGAGACTaGAGACCAGAAATGGGTTCC | + |
Preference number: 3 (lower is better) Translates to: GHKLVGYFIRALQSIAWQRSQRD*RPEMGS Trigger: GGAACCCATTTCTGGTCTCAAGTCTCTCTGTGATCT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGAATCAATGCAATCTTaGGACTCCTGTGAAACATTC | + |
Preference number: 3 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSESMQS*DSCETF Trigger: GAATGTTTCACAGGAGTCCAAAGATTGCATTGATTC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCTATGAAGCTCTGTGCTaGGAGATGCTCACTTTGCTC | + |
Preference number: 3 (lower is better) Translates to: VGIEKNTEKEISEMVLEIYEALC*EMLTLL Trigger: GAGCAAAGTGAGCATCTCCAAGCACAGAGCTTCATA...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATTGAAGTTCTTGGGATaGAACTGGGGCCTTGTGTAC | + |
Preference number: 3 (lower is better) Translates to: GHKLVGYFIRALQSIAWQLKFLG*NWGLVY Trigger: GTACACAAGGCCCCAGTTCAATCCCAAGAACTTCAA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGACATTATTGTTGGCTTaGTGCAGGCCTCATATGGAA | + |
Preference number: 3 (lower is better) Translates to: RNNPEFYTGKTYIEEEKETLLLA*CRPHME Trigger: TTCCATATGAGGCCTGCACAAAGCCAACAATAATGT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAATACATATGCACCCCTaGGAGGATGACTACAATCCA | + |
Preference number: 3 (lower is better) Translates to: GHKLVGYFIRALQSIAWQIHMHP*EDDYNP Trigger: TGGATTGTAGTCATCCTCCAAGGGGTGCATATGTAT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATTTGGAGATGCTCACTTaGCTCGTAGAGAGACCAACA | + |
Preference number: 3 (lower is better) Translates to: QEQIVDKNILVYRRIIWDLEMLT*LVERPT Trigger: TGTTGGTCTCTCTACGAGCAAAGTGAGCATCTCCAA...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | ATATGCCCGTGTCATTGTAGTACAGAAACCAGAAGCTaGACAAAGAAATCAGCACTGACATCTTCATCTTCA | + |
Preference number: 3 (lower is better) Translates to: ICPCHCSTETRS*TKKSALTSSSS Trigger: TGAAGATGAAGATGTCAGTGCTGATTTCTTTGTTCAGCTTCTGGTTTCTGTACTACAATGACACGGGCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 72 bp | AATTTGGTTTGTCAGCAAGGACTACCAGAAGTTGTTTaGAAAGAACCACATGACTTTCAGCTAAAGGACATG | + |
Preference number: 3 (lower is better) Translates to: NLVCQQGLPEVV*KEPHDFQLKDM Trigger: CATGTCCTTTAGCTGAAAGTCATGTGGTTCTTTGCAAACAACTTCTGGTAGTCCTTGCTGACAAACCAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR GCA 72 bp | TCTCAAATTAATCCACGTGTCACAAAGGGGAATCAATaGAATCTTTGGACTCCTGTGAAACATTCTACAGCA | + |
Preference number: 3 (lower is better) Translates to: SQINPRVTKGNQ*NLWTPVKHSTA Trigger: TGCTGTAGAATGTTTCACAGGAGTCCAAAGATTGCATTGATTCCCCTTTGTGACACGTGGATTAATTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | GCCATCCTCAGCTATATTGGAAATATGAGGCCAGATTaGGCTACAGGAAAATTTGTCTTAATCCTCCATATA | + |
Preference number: 3 (lower is better) Translates to: AILSYIGNMRPD*ATGKFVLILHI Trigger: TATATGGAGGATTAAGACAAATTTTCCTGTAGCCCAATCTGGCCTCATATTTCCAATATAGCTGAGGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CCA 72 bp | TGGAAGAGGACTATCAGTTTATACATATGCACCCCTTaGAGGATGACTACAATCCAGAACATGTTCTTAATG | + |
Preference number: 3 (lower is better) Translates to: WKRTISLYICTP*RMTTIQNMFLM Trigger: CATTAAGAACATGTTCTGGATTGTAGTCATCCTCCAAGGGGTGCATATGTATAAACTGATAGTCCTCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CAA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTTTTTGACATTATTGTaGGCTTTGTGCAGGCCTCAT | + |
Preference number: 3 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEFLTLL*ALCRPH Trigger: ATGAGGCCTGCACAAAGCCAACAATAATGTCAAAAA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAACAGTGTGCTGCCATTaGGTACCTACTAATAGTAAC | + |
Preference number: 3 (lower is better) Translates to: GHKLVGYFIRALQSIAWQTVCCH*VPTNSN Trigger: GTTACTATTAGTAGGTACCAAATGGCAGCACACTGT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAAAGGACTACCAGAAGTaGTTTGCAAAGAACCACATG | + |
Preference number: 3 (lower is better) Translates to: GHKLVGYFIRALQSIAWQKDYQK*FAKNHM Trigger: CATGTGGTTCTTTGCAAACAACTTCTGGTAGTCCTT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCTTCCCTGAATGGAATTaGGTTTGTCAGCAAGGACTA | + |
Preference number: 3 (lower is better) Translates to: VGIEKNTEKEISEMVLEIFPEWN*VCQQGL Trigger: TAGTCCTTGCTGACAAACCAAATTCCATTCAGGGAA...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGAAATATGAGGCCAGATaGGGCTACAGGAAAATTTGT | + |
Preference number: 3 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEKYEAR*GYRKIC Trigger: ACAAATTTTCCTGTAGCCCAATCTGGCCTCATATTT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CAA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCACATTTCTTTGTGTTTaGAAGGCCAGCTTTCCTCAG | + |
Preference number: 3 (lower is better) Translates to: VGIEKNTEKEISEMVLEITFLCV*KASFPQ Trigger: CTGAGGAAAGCTGGCCTTCAAAACACAAAGAAATGT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATATAGTTACAGCAGAGTaGGCAATGGCTGAGAACAAG | + |
Preference number: 3 (lower is better) Translates to: QEQIVDKNILVYRRIIWDIVTAE*AMAENK Trigger: CTTGTTCTCAGCCATTGCCAACTCTGCTGTAACTAT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
3UTR-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATACATTATTGTTGGCTTaGTGCAGGCCTCATATGGAA | + |
Preference number: 3 (lower is better) Translates to: QEQIVDKNILVYRRIIWDTLLLA*CRPHME Trigger: TTCCATATGAGGCCTGCACAAAGCCAACAATAATGT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACATCTAGTAGGATTTTaGTCAAGATCTTCTTCCAGG | + |
Preference number: 3 (lower is better) Translates to: GHKLVGYFIRALQSIAWQHLVGF*SRSSSR Trigger: CCTGGAAGAAGATCTTGACAAAAATCCTACTAGATG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCCATCTAGTAGGATTTTaGTCAAGATCTTCTTCCAGG | + |
Preference number: 3 (lower is better) Translates to: VGIEKNTEKEISEMVLEIHLVGF*SRSSSR Trigger: CCTGGAAGAAGATCTTGACAAAAATCCTACTAGATG...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGATGTTGCTAAGATGTTaGCTCACCTTTTATACACAG | + |
Preference number: 3 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEMLLRC*LTFYTQ Trigger: CTGTGTATAAAAGGTGAGCAAACATCTTAGCAACAT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | CTGAGATTGACAGAAGAGTTCATTATACGATTAAAGTaGTGTTTGTTGTACAGAAGGATGGATTCAAGGACC | + |
Preference number: 3 (lower is better) Translates to: LRLTEEFIIRLK*CLLYRRMDSRT Trigger: GGTCCTTGAATCCATCCTTCTGTACAACAAACATCACTTTAATCGTATAATGAACTCTTCTGTCAATCTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 72 bp | CCAATAGTAACAAACATTTCTAACACGGATTACTGCTaGTGTGTAAAAGTCCTGTTGATAACTGACCTTACA | + |
Preference number: 3 (lower is better) Translates to: PIVTNISNTDYC*CVKVLLITDLT Trigger: TGTAAGGTCAGTTATCAACAGGACTTTTACACAGCAGCAGTAATCCGTGTTAGAAATGTTTGTTACTATTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR GCA 72 bp | TCTCCAATAGTAACAAACATTTCTAACACGGATTACTaGTGCTGTGTAAAAGTCCTGTTGATAACTGACCTT | + |
Preference number: 3 (lower is better) Translates to: SPIVTNISNTDY*CCVKVLLITDL Trigger: AAGGTCAGTTATCAACAGGACTTTTACACAGCAGCAGTAATCCGTGTTAGAAATGTTTGTTACTATTGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATAAATATGAGGCCAGATaGGGCTACAGGAAAATTTGT | + |
Preference number: 3 (lower is better) Translates to: QEQIVDKNILVYRRIIWDKYEAR*GYRKIC Trigger: ACAAATTTTCCTGTAGCCCAATCTGGCCTCATATTT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR TCA 72 bp | TGGATTCAAGGACCAGTCTGTTATTCTGGAAGGACTTaGTTTAATGGAAGAGGACTATCAGTTTATACATAT | + |
Preference number: 3 (lower is better) Translates to: WIQGPVCYSGRT*FNGRGLSVYTY Trigger: ATATGTATAAACTGATAGTCCTCTTCCATTAAATCAAGTCCTTCCAGAATAACAGACTGGTCCTTGAATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAACTTCCTCTCCTGGTGTaGGTGCAGACAAAGAACCAG | + |
Preference number: 4 (lower is better) Translates to: MAENKAHTESQKTSMASQLPLLV*VQTKNQ Trigger: CTGGTTCTTTGTCTGCACTCACACCAGGAGAGGAAG...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATAGCAGGGCCTCCTCTTaGAGGTGGAACTTCAATTCC | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHSRASS*RWNFNS Trigger: GGAATTGAAGTTCCACCTCCAAGAGGAGGCCCTGCT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATAGAAGACACACTGAGTaGGGTATCATCAGGATCCGG | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHRRHTE*GIIRIR Trigger: CCGGATCCTGATGATACCTCACTCAGTGTGTCTTCT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGGACAGCAGTGCCTGCTaGTGGTCTTTATCATCAGCT | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVREDSSAC*WSLSSA Trigger: AGCTGATGATAAAGACCAGCAGCAGGCACTGCTGTC...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCAACTGGTTCAATTTTaGAAGGTCGCTGGCACACAG | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHQLVQF*KVAGTQ Trigger: CTGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGACTCTCCTGGTGTGAGTaGAGACAAAGAACCAGACTC | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRLSWCE*RQRTRL Trigger: GAGTCTGGTTCTTTGTCTGCACTCACACCAGGAGAG...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCTCCTCTTGAGAGCTTaGTTCGGACAAACAGATGGA | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHLLLRA*FGQTDG Trigger: TCCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCCGGCGAGGCATGACTaGAATCCATCTCTTCTAATT | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHPARHD*NPSLLI Trigger: AATTAGAAGAGATGGATTGCAGTCATGCCTCGCCGG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGTCGCTGGCACACAGATaGCTTTTGAGGTACTGTCAT | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVRESLAHR*LLRYCH Trigger: ATGACAGTACCTCAAAAGCCATCTGTGTGCCAGCGA...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATAGCAGTGCCTGCTGCTaGTCTTTATCATCAGCTTTC | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHSSACC*SLSSAF Trigger: GAAAGCTGATGATAAAGACCAGCAGCAGGCACTGCT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | GAGCTCCTTCAAGAGAACATAGTCAGAGGGAGAGGATaGCTGTCCAGACCTGTTCTGCAAGTGCAGAGTGCT | + |
Preference number: 4 (lower is better) Translates to: ELLQENIVRGRG*LSRPVLQVQSA Trigger: AGCACTCTGCACTTGCAGAACAGGTCTGGACAGCAATCCTCTCCCTCTGACTATGTTCTCTTGAAGGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATAGTTCCTGCTGCTCCTaGTTCACAGCTTTTACTACT | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHSSCCS*FTAFTT Trigger: AGTAGTAAAAGCTGTGAATCAGGAGCAGCAGGAACT...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATGTCTCCAGTCTCCATTaGAATGGACAAACAAGTTCC | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHVSSLH*NGQTSS Trigger: GGAACTTGTTTGTCCATTGCAATGGAGACTGGAGAC...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGACTCCTCTTGAGAGCTTaGTTCGGACAAACAGATGGA | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRLLLRA*FGQTDG Trigger: TCCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAG...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCCAGTTCTTCTTCTCTaGCATATTCATCCTCTGCGT | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHPVLLL*HIHPLR Trigger: ACGCAGAGGATGAATATGCCAGAGAAGAAGAACTGG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAATGGCAGGTTTCTTCCTaGTCCAGGCAAATTTGTACT | + |
Preference number: 4 (lower is better) Translates to: MAENKAHTESQKTSMASQWQVSS*SRQICT Trigger: AGTACAAATTTGCCTGGACCAGGAAGAAACCTGCCA...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAATATTTGTGCTCCCATTaGTGCCAGTTCTTCTTCTCT | + |
Preference number: 4 (lower is better) Translates to: MAENKAHTESQKTSMASQYLCSH*CQFFFS Trigger: AGAGAAGAAGAACTGGCATCAATGGGAGCACAAATA...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGATTATCTGCAGATACTaGCTGGTGCTCTTCATCCTT | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVREIICRY*LVLFIL Trigger: AAGGATGAAGAGCACCAGGCAGTATCTGCAGATAAT...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAACCTTTGAATCCCAACTaGTTCAATTTTGCAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: MAENKAHTESQKTSMASQPLNPN*FNFARS Trigger: CGACCTTGCAAAATTGAACCAGTTGGGATTCAAAGG...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCAGTCTCCATTGCAATaGACAAACAAGTTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHQSPLQ*TNKFLL Trigger: CAGAAGGAACTTGTTTGTCCATTGCAATGGAGACTG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | TGGAAGACAGAAGCCATGAGAATAGTTACAGCAGAGTaGGCAATGGCTGAGAACAAGGCTCACACAGAGAGC | + |
Preference number: 4 (lower is better) Translates to: WKTEAMRIVTAE*AMAENKAHTES Trigger: GCTCTCTGTGTGAGCCTTGTTCTCAGCCATTGCCAACTCTGCTGTAACTATTCTCATGGCTTCTGTCTTCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAATGTTCAGGTTTATATaGCCTTTGAATCCCAACTGG | + |
Preference number: 4 (lower is better) Translates to: MAENKAHTESQKTSMASQMFRFI*PLNPNW Trigger: CCAGTTGGGATTCAAAGGTCATATAAACCTGAACAT...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGATCTGAGGGTAATCACTaGCTGCCAATGAAAACACTT | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRSEGNH*LPMKTL Trigger: AAGTGTTTTCATTGGCAGTCAGTGATTACCCTCAGA...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAATTATCTGCAGATACTaGCTGGTGCTCTTCATCCTT | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRIICRY*LVLFIL Trigger: AAGGATGAAGAGCACCAGGCAGTATCTGCAGATAAT...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGTATTTTCACATTATCTaGAGATACTGCCTGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVREYFHII*RYCLVL Trigger: GAGCACCAGGCAGTATCTGCAGATAATGTGAAAATA...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAGGCAAATTTGTACTTTaGTTCTCAGCTCGAAGGGAA | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRGKFVL*FSARRE Trigger: TTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCC...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
||
CDS-3UTR CCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCTTCGGACAAACAGATaGACACTTCATCATTTCTGT | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVRELRTNR*TLHHFC Trigger: ACAGAAATGATGAAGTGTCCATCTGTTTGTCCGAAG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGTTATTGGCTGCCTTCTaGATAGGAATTTTATGTGCT | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVRELLAAF*IGILCA Trigger: AGCACATAAAATTCCTATTCAGAAGGCAGCCAATAA...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATGGTTTATATGACCTTTaGATCCCAACTGGTTCAATT | + |
Preference number: 4 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHGLYDL*IPTGSI Trigger: AATTGAACCAGTTGGGATTCAAAGGTCATATAAACC...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCACAGAAAGGTTTCCTaGAATCTGGTAATTGTTTTG | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVREHRKVS*NLVIVL Trigger: CAAAACAATTACCAGATTTCAGGAAACCTTTCTGTG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGGTGCACACTGTAATATaGGCTGAAAGCAATTTTTAC | + |
Preference number: 4 (lower is better) Translates to: TQRARRQAWRAKEEAVREVHTVI*AESNFY Trigger: GTAAAAATTGCTTTCAGCTCATATTACAGTGTGCAC...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGAAGTCCAAGAAGATTaGTGGCTTGAAGGGCGGGCA | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSEVQED*WLEGRA Trigger: TGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGAACCAGACTCAGGCTaGTCAGAGAAATCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSEPDSG*SEKSAG Trigger: CCCTGCTGATTTCTCTGAGCAGCCTGAGTCTGGTTC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGACTTCGGACAAACAGATaGACACTTCATCATTTCTGT | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRLRTNR*TLHHFC Trigger: ACAGAAATGATGAAGTGTCCATCTGTTTGTCCGAAG...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACAGAAGACACACTGAGTaGGGTATCATCAGGATCCGG | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYRRHTE*GIIRIR Trigger: CCGGATCCTGATGATACCTCACTCAGTGTGTCTTCT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGACTAATGGTTGGCTTTTaGCCACATAAGTTATGTGAT | + |
Preference number: 4 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRLMVGF*PHKLCD Trigger: ATCACATAACTTATGTGGGCAAAAGCCAACCATTAG...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTATACAGAGCCCAGGCTaGTCATACCATTGTCCCAGT | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSIQSPG*SYHCPS Trigger: ACTGGGACAATGGTATGACCAGCCTGGGCTCTGTAT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | ACTGTCAAGGAACTCAGACCATTGCATACGTGTCACTaGAATGAACCCAAGGCATCTGGTTTATTGGGTCAG | + |
Preference number: 4 (lower is better) Translates to: TVKELRPLHTCH*NEPKASGLLGQ Trigger: CTGACCCAATAAACCAGATGCCTTGGGTTCATTCAAGTGACACGTATGCAATGGTCTGAGTTCCTTGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTAGAAGATTGCTGGCTTaGAGGGCGGGCAATATTAAC | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSRRLLA*RAGNIN Trigger: GTTAATATTGCCCGCCCTTCAAGCCAGCAATCTTCT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACAGATGCTGTATGCAATaGGGTCCGTGGTGTCAAATG | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYRCCMQ*GPWCQM Trigger: CATTTGACACCACGGACCTCATTGCATACAGCATCT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTCTCGGTCACTGAATTaGGTGCGGTCCTGTAGTGCT | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKESRSLN*VRSCSA Trigger: AGCACTACAGGACCGCACTCAATTCAGTGACCGAGA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGTACTAGATGCTGTATaGAATGAGGTCCGTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSVLDAV*NEVRGV Trigger: GACACCACGGACCTCATTGCATACAGCATCTAGTAC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGTACTAGATGCTGTATaGAATGAGGTCCGTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYVLDAV*NEVRGV Trigger: GACACCACGGACCTCATTGCATACAGCATCTAGTAC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGGAACCAGACTCAGGCTaGTCAGAGAAATCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEEPDSG*SEKSAG Trigger: CCCTGCTGATTTCTCTGAGCAGCCTGAGTCTGGTTC...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACCCGGCGAGGCATGACTaGAATCCATCTCTTCTAATT | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYPARHD*NPSLLI Trigger: AATTAGAAGAGATGGATTGCAGTCATGCCTCGCCGG...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATCTCGGTCACTGAATTaGGTGCGGTCCTGTAGTGCT | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQSRSLN*VRSCSA Trigger: AGCACTACAGGACCGCACTCAATTCAGTGACCGAGA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACCAAGTCTCGGTCACTaGATTGAGTGCGGTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQPSLGH*IECGPV Trigger: TACAGGACCGCACTCAATTCAGTGACCGAGACTTGG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCGAAGTCCAAGAAGATTaGTGGCTTGAAGGGCGGGCA | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEIEVQED*WLEGRA Trigger: TGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTC...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGAGGCCGGCTTCTGTGTaGTATTTCCTCCCAGAATTC | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKERPASV*YFLPEF Trigger: GAATTCTGGGAGGAAATAGCACACAGAAGCCGGCCT...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTTGGCAGGTTTCTTCCTaGTCCAGGCAAATTTGTACT | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSWQVSS*SRQICT Trigger: AGTACAAATTTGCCTGGACCAGGAAGAAACCTGCCA...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACCCAGCTTCCTCTCCTaGTGTGAGTGCAGACAAAGA | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQPSFLS*CECRQR Trigger: TCTTTGTCTGCACTCACACCAGGAGAGGAAGCTGGG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | AGTGCTTCTCCAATCTTCCCTCATGTTTATGCAGCTTaGGTGGCAATAATCAACTCAAAAGTCCCACAGACT | + |
Preference number: 4 (lower is better) Translates to: SASPIFPHVYAA*VAIINSKVPQT Trigger: AGTCTGTGGGACTTTTGAGTTGATTATTGCCACCAAAGCTGCATAAACATGAGGGAAGATTGGAGAAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTGCGCTACTTGTCTTTaGACAGGAATGTGCAATTGT | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYCATCL*TGMCNC Trigger: ACAATTGCACATTCCTGTTCAAAGACAAGTAGCGCA...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCCAAGTCTCGGTCACTaGATTGAGTGCGGTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDPSLGH*IECGPV Trigger: TACAGGACCGCACTCAATTCAGTGACCGAGACTTGG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCTTCCTCTCCTGGTGTaGGTGCAGACAAAGAACCAG | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDLPLLV*VQTKNQ Trigger: CTGGTTCTTTGTCTGCACTCACACCAGGAGAGGAAG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGCAACTGGTTCAATTTTaGAAGGTCGCTGGCACACAG | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEQLVQF*KVAGTQ Trigger: CTGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTG...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACCCTTTGAATCCCAACTaGTTCAATTTTGCAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYPLNPN*FNFARS Trigger: CGACCTTGCAAAATTGAACCAGTTGGGATTCAAAGG...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCCCAGCTTCCTCTCCTaGTGTGAGTGCAGACAAAGA | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDPSFLS*CECRQR Trigger: TCTTTGTCTGCACTCACACCAGGAGAGGAAGCTGGG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | AGTAGTTTCATGGTTTTCCTATTGAAGTTCTTGGGATaGAACTGGGGCCTTGTGTACATGCTAAGCAAGTGT | + |
Preference number: 4 (lower is better) Translates to: SSFMVFLLKFLG*NWGLVYMLSKC Trigger: ACACTTGCTTAGCATGTACACAAGGCCCCAGTTCAATCCCAAGAACTTCAATAGGAAAACCATGAAACTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAGAAGATTGCTGGCTTaGAGGGCGGGCAATATTAAC | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEIRRLLA*RAGNIN Trigger: GTTAATATTGCCCGCCCTTCAAGCCAGCAATCTTCT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACATGTTCAGGTTTATATaGCCTTTGAATCCCAACTGG | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYMFRFI*PLNPNW Trigger: CCAGTTGGGATTCAAAGGTCATATAAACCTGAACAT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTATCACTGACTGCCAATaGAAACACTTCACGAATTTC | + |
Preference number: 4 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSITDCQ*KHFTNF Trigger: GAAATTCGTGAAGTGTTTTCATTGGCAGTCAGTGAT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAGATGCTGTATGCAATaGGGTCCGTGGTGTCAAATG | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEIRCCMQ*GPWCQM Trigger: CATTTGACACCACGGACCTCATTGCATACAGCATCT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACATAAAGAAGACACACTaGGTGAGGTATCATCAGGAT | + |
Preference number: 4 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYIKKTH*VRYHQD Trigger: ATCCTGATGATACCTCACTCAGTGTGTCTTCTTTAT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATAGGCCGGCTTCTGTGTaGTATTTCCTCCCAGAATTC | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDRPASV*YFLPEF Trigger: GAATTCTGGGAGGAAATAGCACACAGAAGCCGGCCT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCTCTCCTGGTGTGAGTaGAGACAAAGAACCAGACTC | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDLSWCE*RQRTRL Trigger: GAGTCTGGTTCTTTGTCTGCACTCACACCAGGAGAG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATGTCCAAGAAGATTGCTaGCTTGAAGGGCGGGCAATA | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDVQEDC*LEGRAI Trigger: TATTGCCCGCCCTTCAAGCCAGCAATCTTCTTGGAC...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCTCGCTGGCACACAGATaGCTTTTGAGGTACTGTCAT | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEISLAHR*LLRYCH Trigger: ATGACAGTACCTCAAAAGCCATCTGTGTGCCAGCGA...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATATACAGAGCCCAGGCTaGTCATACCATTGTCCCAGT | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDIQSPG*SYHCPS Trigger: ACTGGGACAATGGTATGACCAGCCTGGGCTCTGTAT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTGCCCTGGTCTCATTTaGGATAAGTTCATTGGACTC | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKECPGLI*DKFIGL Trigger: GAGTCCAATGAACTTATCCCAAATGAGACCAGGGCA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCAGCAGTGCCTGCTGCTaGTCTTTATCATCAGCTTTC | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEISSACC*SLSSAF Trigger: GAAAGCTGATGATAAAGACCAGCAGCAGGCACTGCT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAAGTTCCTGCTGCTCCTaGTTCACAGCTTTTACTACT | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQSSCCS*FTAFTT Trigger: AGTAGTAAAAGCTGTGAATCAGGAGCAGCAGGAACT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTATTTGTGCTCCCATTaGTGCCAGTTCTTCTTCTCT | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEYLCSH*CQFFFS Trigger: AGAGAAGAAGAACTGGCATCAATGGGAGCACAAATA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCGTCTCCAGTCTCCATTaGAATGGACAAACAAGTTCC | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEIVSSLH*NGQTSS Trigger: GGAACTTGTTTGTCCATTGCAATGGAGACTGGAGAC...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAACCAGTTCTTCTTCTCTaGCATATTCATCCTCTGCGT | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQPVLLL*HIHPLR Trigger: ACGCAGAGGATGAATATGCCAGAGAAGAAGAACTGG...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATGCGCTACTTGTCTTTaGACAGGAATGTGCAATTGT | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQCATCL*TGMCNC Trigger: ACAATTGCACATTCCTGTTCAAAGACAAGTAGCGCA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAATCTGAGGGTAATCACTaGCTGCCAATGAAAACACTT | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQSEGNH*LPMKTL Trigger: AAGTGTTTTCATTGGCAGTCAGTGATTACCCTCAGA...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR GCA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTATTTTCACATTATCTaGAGATACTGCCTGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEYFHII*RYCLVL Trigger: GAGCACCAGGCAGTATCTGCAGATAATGTGAAAATA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCGGCAAATTTGTACTTTaGTTCTCAGCTCGAAGGGAA | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEIGKFVL*FSARRE Trigger: TTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCC...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATTGCCCTGGTCTCATTTaGGATAAGTTCATTGGACTC | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDCPGLI*DKFIGL Trigger: GAGTCCAATGAACTTATCCCAAATGAGACCAGGGCA...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | ATGGAAGAGGACTATCAGTTTATACATATGCACCCCTaGGAGGATGACTACAATCCAGAACATGTTCTTAAT | + |
Preference number: 4 (lower is better) Translates to: MEEDYQFIHMHP*EDDYNPEHVLN Trigger: ATTAAGAACATGTTCTGGATTGTAGTCATCCTCCAAGGGGTGCATATGTATAAACTGATAGTCCTCTTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAATAAAGAAGACACACTaGGTGAGGTATCATCAGGAT | + |
Preference number: 4 (lower is better) Translates to: GHKLVGYFIRALQSIAWQIKKTH*VRYHQD Trigger: ATCCTGATGATACCTCACTCAGTGTGTCTTCTTTAT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CCA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCAGTCTCCATTGCAATaGACAAACAAGTTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: QEQIVDKNILVYRRIIWDQSPLQ*TNKFLL Trigger: CAGAAGGAACTTGTTTGTCCATTGCAATGGAGACTG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | CAGTACTACACCATCCTTCGCTTAGAGACAAACAAATaGAGAAATGTTGCTAAGATGTTTGCTCACCTTTTA | + |
Preference number: 4 (lower is better) Translates to: QYYTILRLETNK*RNVAKMFAHLL Trigger: TAAAAGGTGAGCAAACATCTTAGCAACATTTCTCAATTTGTTTGTCTCTAAGCGAAGGATGGTGTAGTACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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3UTR CAA 72 bp | ATATGTTTCCATTATAGTAGTTTCATGGTTTTCCTATaGAAGTTCTTGGGATTGAACTGGGGCCTTGTGTAC | + |
Preference number: 4 (lower is better) Translates to: ICFHYSSFMVFL*KFLGLNWGLVY Trigger: GTACACAAGGCCCCAGTTCAATCCCAAGAACTTCAATAGGAAAACCATGAAACTACTATAATGGAAACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR TCA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCGGTTTATATGACCTTTaGATCCCAACTGGTTCAATT | + |
Preference number: 4 (lower is better) Translates to: VGIEKNTEKEISEMVLEIGLYDL*IPTGSI Trigger: AATTGAACCAGTTGGGATTCAAAGGTCATATAAACC...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCAGCAGGGCCTCCTCTaGGAGGTGGAACTTCAATTC | + |
Preference number: 5 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHQQGLL*EVELQF Trigger: GAATTGAAGTTCCACCTCCAAGAGGAGGCCCTGCTG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATCCAACTGGTTCAATTTaGCAAGGTCGCTGGCACACA | + |
Preference number: 5 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHPTGSI*QGRWHT Trigger: TGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTGG...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAACCAACTGGTTCAATTTaGCAAGGTCGCTGGCACACA | + |
Preference number: 5 (lower is better) Translates to: MAENKAHTESQKTSMASQPTGSI*QGRWHT Trigger: TGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTGG...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | TGCGTCTCCAGTCTCCATTGCAATGGACAAACAAGTTCCTTCTGCTaGGGCCGGCTTCTGTGTGCTATTTCCTCCCAGAATTCTCTGAGG | + |
Preference number: 5 (lower is better) Translates to: CVSSLHCNGQTSSFC*GRLLCAISSQNSLR Trigger: CCTCAGAGAATTCTGGGAGGAAATAGCACACAGAAGCCGGCCTCAGCAGAAGGAACTTGTTTGTCCATTGCAATGGAGACTGGAGACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAACGTCTCCAGTCTCCATaGCAATGGACAAACAAGTTC | + |
Preference number: 5 (lower is better) Translates to: MAENKAHTESQKTSMASQRLQSP*QWTNKF Trigger: GAACTTGTTTGTCCATTGCAATGGAGACTGGAGACG...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | ACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAGAAGAAGCGGTGAGAGAGCTTACAGTGCGCTACTaGTCTTTGAACAGGAATGTG | + |
Preference number: 5 (lower is better) Translates to: TQRARRQAWRAKEEAVRELTVRY*SLNRNV Trigger: CACATTCCTGTTCAAAGACAAGTAGCGCACTGTAAG...CTCTCTCACCGCTTCTTCTTTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATTCACCATTTGTGAATTaGGCAGGTTTCTTCCTGGTC | + |
Preference number: 5 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHSPFVN*AGFFLV Trigger: GACCAGGAAGAAACCTGCCAAATTCACAAATGGTGA...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GGAGACACAGACTGGCAAGATCCCCTAGCAGAGCACATGGAAGACAGAAGCCATTTATTTGTGCTCCCATaGATGCCAGTTCTTCTTCTC | + |
Preference number: 5 (lower is better) Translates to: GDTDWQDPLAEHMEDRSHLFVLP*MPVLLL Trigger: GAGAAGAAGAACTGGCATCAATGGGAGCACAAATAA...ATGGCTTCTGTCTTCCATGTGCTCTGCTAGGGGATCTTGCCAGTCTGTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAAGGCAAATTTGTACTTaGGTTCTCAGCTCGAAGGGA | + |
Preference number: 5 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRRQICT*VLSSKG Trigger: TCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCCT...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGATCACCATTTGTGAATTaGGCAGGTTTCTTCCTGGTC | + |
Preference number: 5 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRSPFVN*AGFFLV Trigger: GACCAGGAAGAAACCTGCCAAATTCACAAATGGTGA...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | CCTCCTCCTCCTCTGGCAGTCAGAGATCTGCCTCAGCTAAAGGTACAAAGAAGAACGAATTTCCAAGTTTaGTGTTCTACAGCAAGGGTC | + |
Preference number: 5 (lower is better) Translates to: PPPPLAVRDLPQLKVQRRTNFQV*CSTARV Trigger: GACCCTTGCTGTAGAACACAAAACTTGGAAATTCGT...TCTTCTTTGTACCTTTAGCTGAGGCAGATCTCTGACTGCCAGAGGAGGAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | ATGGCTGAGAACAAGGCTCACACAGAGAGCCAGAAGACAAGCATGGCGAGCCAAAAAACCTTGAGTAGCTaGTTATTTGTGCTCCCATTG | + |
Preference number: 5 (lower is better) Translates to: MAENKAHTESQKTSMASQKTLSS*LFVLPL Trigger: CAATGGGAGCACAAATAACAAGCTACTCAAGGTTTT...TTGGCTCGCCATGCTTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCAGCCAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTCAGCAGGGCCTCCTCTaGGAGGTGGAACTTCAATTC | + |
Preference number: 5 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSQQGLL*EVELQF Trigger: GAATTGAAGTTCCACCTCCAAGAGGAGGCCCTGCTG...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | GCAAGGTCGCTGGCACACAGATGGCTTTTGAGGTACTGTCATTTCTaGAGCTTGCACCGGAGAACTTCCATAGCTTTTCTTTGTGTGATT | + |
Preference number: 5 (lower is better) Translates to: ARSLAHRWLLRYCHF*SLHRRTSIAFLCVI Trigger: AATCACACAAAGAAAAGCTATGGAAGTTCTCCGGTGCAAGCTTCAGAAATGACAGTACCTCAAAAGCCATCTGTGTGCCAGCGACCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | AAAGAAGACACACTGAGTGAGGTATCATCAGGATCCGGCGAGGCATaGCTGCAATCCATCTCTTCTAATTCTGGAGGTAAATCTGACAGC | + |
Preference number: 5 (lower is better) Translates to: KEDTLSEVSSGSGEA*LQSISSNSGGKSDS Trigger: GCTGTCAGATTTACCTCCAGAATTAGAAGAGATGGATTGCAGTCATGCCTCGCCGGATCCTGATGATACCTCACTCAGTGTGTCTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACACTCCTCTTGAGAGCTaGCTTCGGACAAACAGATGG | + |
Preference number: 5 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYTPLES*LRTNRW Trigger: CCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAGT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | TTATGTGCCCTGGTCTCATTTGGGATAAGTTCATTGGACTCCTCTTaGGAGCTTGCTTCGGACAAACAGATGGACACTTCATCATTTCTG | + |
Preference number: 5 (lower is better) Translates to: LCALVSFGISSLDSS*ELASDKQMDTSSFL Trigger: CAGAAATGATGAAGTGTCCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAGTCCAATGAACTTATCCCAAATGAGACCAGGGCACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | TTTCACATTATCTGCAGATACTGCCTGGTGCTCTTCATCCTTATGTaGCCTGGTCTCATTTGGGATAAGTTCATTGGACTCCTCTTGAGA | + |
Preference number: 5 (lower is better) Translates to: FHIICRYCLVLFILM*PGLIWDKFIGLLLR Trigger: TCTCAAGAGGAGTCCAATGAACTTATCCCAAATGAGACCAGGGCACATAAGGATGAAGAGCACCAGGCAGTATCTGCAGATAATGTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | AAGTTATGTGATGCCAGACCTGCATGTTCAGGTTTATATGACCTTTaGATCCCAACTGGTTCAATTTTGCAAGGTCGCTGGCACACAGAT | + |
Preference number: 5 (lower is better) Translates to: KLCDARPACSGLYDL*IPTGSILQGRWHTD Trigger: ATCTGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTGGGATTCAAAGGTCATATAAACCTGAACATGCAGGTCTGGCATCACATAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | TCCAAGTTTTGTGTTCTACAGCAAGGGTCTCTAATGGTTGGCTTTTaGCCACATAAGTTATGTGATGCCAGACCTGCATGTTCAGGTTTA | + |
Preference number: 5 (lower is better) Translates to: SKFCVLQQGSLMVGF*PHKLCDARPACSGL Trigger: TAAACCTGAACATGCAGGTCTGGCATCACATAACTTATGTGGGCAAAAGCCAACCATTAGAGACCCTTGCTGTAGAACACAAAACTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | CTGGTCCAGGCAAATTTGTACTTTGGTTCTCAGCTCGAAGGGAATTaGCACTTTCATAAAACCTTGAGTAGCTTGTTATTTGTGCTCCCA | + |
Preference number: 5 (lower is better) Translates to: LVQANLYFGSQLEGN*HFHKTLSSLLFVLP Trigger: TGGGAGCACAAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCAATTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCCTGGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | CCTGGTCTCATTTGGGATAAGTTCATTGGACTCCTCTTGAGAGCTTaGTTCGGACAAACAGATGGACACTTCATCATTTCTGTCATTATC | + |
Preference number: 5 (lower is better) Translates to: PGLIWDKFIGLLLRA*FGQTDGHFIISVII Trigger: GATAATGACAGAAATGATGAAGTGTCCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAGTCCAATGAACTTATCCCAAATGAGACCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | CAATCCATCTCTTCTAATTCTGGAGGTAAATCTGACAGCAGTGCCTaGTGCTGGTCTTTATCATCAGCTTTCATAGCGAGAATCAGGTTT | + |
Preference number: 5 (lower is better) Translates to: QSISSNSGGKSDSSA*CWSLSSAFIARIRF Trigger: AAACCTGATTCTCGCTATGAAAGCTGATGATAAAGACCAGCAGCAGGCACTGCTGTCAGATTTACCTCCAGAATTAGAAGAGATGGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTGTGCGCTACTTGTCTTaGAACAGGAATGTGCAATTG | + |
Preference number: 5 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSVRYLS*NRNVQL Trigger: CAATTGCACATTCCTGTTCAAAGACAAGTAGCGCAC...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACGTGCGCTACTTGTCTTaGAACAGGAATGTGCAATTG | + |
Preference number: 5 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYVRYLS*NRNVQL Trigger: CAATTGCACATTCCTGTTCAAAGACAAGTAGCGCAC...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACAGGCAAATTTGTACTTaGGTTCTCAGCTCGAAGGGA | + |
Preference number: 5 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYRQICT*VLSSKG Trigger: TCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCCT...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTATTTTTCTTCGCTTATaGCCAACCCACGTCCTGACT | + |
Preference number: 5 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSIFLRL*PTHVLT Trigger: AGTCAGGACGTGGGTTGGCAATAAGCGAAGAAAAAT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113422.9 |
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CDS TCA 90 bp | GCTATTTCCTCCCAGAATTCTCTGAGGGTAATCACTGACTGCCAATaGAAACACTTCACGAATTTCCAAGTTTTGTGTTCTACAGCAAGG | + |
Preference number: 5 (lower is better) Translates to: AISSQNSLRVITDCQ*KHFTNFQVLCSTAR Trigger: CCTTGCTGTAGAACACAAAACTTGGAAATTCGTGAAGTGTTTTCATTGGCAGTCAGTGATTACCCTCAGAGAATTCTGGGAGGAAATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | GCTTCTGTGTGCTATTTCCTCCCAGAATTCTCTGAGGGTAATCACTaGCTGCCAATGAAAACACTTCACGAATTTCCAAGTTTTGTGTTC | + |
Preference number: 5 (lower is better) Translates to: ASVCYFLPEFSEGNH*LPMKTLHEFPSFVF Trigger: GAACACAAAACTTGGAAATTCGTGAAGTGTTTTCATTGGCAGTCAGTGATTACCCTCAGAGAATTCTGGGAGGAAATAGCACACAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | CATGTTCAGGTTTATATGACCTTTGAATCCCAACTGGTTCAATTTTaGAAGGTCGCTGGCACACAGATGGCTTTTGAGGTACTGTCATTT | + |
Preference number: 5 (lower is better) Translates to: HVQVYMTFESQLVQF*KVAGTQMAFEVLSF Trigger: AAATGACAGTACCTCAAAAGCCATCTGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTGGGATTCAAAGGTCATATAAACCTGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAACTCCTCTTGAGAGCTaGCTTCGGACAAACAGATGG | + |
Preference number: 5 (lower is better) Translates to: GHKLVGYFIRALQSIAWQTPLES*LRTNRW Trigger: CCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAGT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTTCATTGGACTCCTCTaGAGAGCTTGCTTCGGACAA | + |
Preference number: 5 (lower is better) Translates to: RNNPEFYTGKTYIEEEKEFIGLL*RACFGQ Trigger: TTGTCCGAAGCAAGCTCTCAAGAGGAGTCCAATGAA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | TCCCCTAGGAGCACAGAAGCATTCTTACAGTGCGCTACTTGTCTTTaGACAGGAATGTGCAATTGTAATTCAGTGTCATTTTTATTGGCT | + |
Preference number: 5 (lower is better) Translates to: SPRSTEAFLQCATCL*TGMCNCNSVSFLLA Trigger: AGCCAATAAAAATGACACTGAATTACAATTGCACATTCCTGTTCAAAGACAAGTAGCGCACTGTAAGAATGCTTCTGTGCTCCTAGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 90 bp | ATACCAGTTACAATGACATCATTATTGGCAGAAGTCCAAGAAGATTaGTGGCTTGAAGGGCGGGCAATATTAACCACATTTCTGACTGTA | + |
Preference number: 5 (lower is better) Translates to: IPVTMTSLLAEVQED*WLEGRAILTTFLTV Trigger: TACAGTCAGAAATGTGGTTAATATTGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTCTGCCAATAATGATGTCATTGTAACTGGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 90 bp | CTTGCTTACTTGATGAGCTTACTGGACTGTATATACCAGTTACAATaGCATCATTATTGGCAGAAGTCCAAGAAGATTGCTGGCTTGAAG | + |
Preference number: 5 (lower is better) Translates to: LAYLMSLLDCIYQLQ*HHYWQKSKKIAGLK Trigger: CTTCAAGCCAGCAATCTTCTTGGACTTCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGTAAGCTCATCAAGTAAGCAAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CCA 90 bp | TCATCATCGATAATTTCTATTTTCACATTATCTGCAGATACTGCCTaGTGCTCTTCATCCTTATGTGCCCTGGTCTCATTTGGGATAAGT | + |
Preference number: 5 (lower is better) Translates to: SSSIISIFTLSADTA*CSSSLCALVSFGIS Trigger: ACTTATCCCAAATGAGACCAGGGCACATAAGGATGAAGAGCACCAGGCAGTATCTGCAGATAATGTGAAAATAGAAATTATCGATGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | AGGAATAACCCAGAGTTCTACACAGGAAAAACCTACATTGAAGAAGAAAAGGAGTTATTTGTGCTCCCATaGATGCCAGTTCTTCTTCTC | + |
Preference number: 5 (lower is better) Translates to: RNNPEFYTGKTYIEEEKELFVLP*MPVLLL Trigger: GAGAAGAAGAACTGGCATCAATGGGAGCACAAATAA...CTCCTTTTCTTCTTCAATGTAGGTTTTTCCTGTGTAGAACTCTGGGTTATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATCTGGTCCAGGCAAATTaGTACTTTGGTTCTCAGCTC | + |
Preference number: 5 (lower is better) Translates to: QEQIVDKNILVYRRIIWDLVQAN*YFGSQL Trigger: GAGCTGAGAACCAAAGTACAAATTTGCCTGGACCAG...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTCTATAACCTCAGTTGGTTaGATGATACAAAATGTGGAG | + |
Preference number: 5 (lower is better) Translates to: DYSDYSRSDYEHSRKGYSITSVG*MIQNVE Trigger: CTCCACATTTTGTATCATCAAACCAACTGAGGTTAT...AGAGTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATTTCATTGGACTCCTCTaGAGAGCTTGCTTCGGACAA | + |
Preference number: 5 (lower is better) Translates to: QEQIVDKNILVYRRIIWDFIGLL*RACFGQ Trigger: TTGTCCGAAGCAAGCTCTCAAGAGGAGTCCAATGAA...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | AGAGACTACTCTGATTACAGCCGGTCAGACTATGAGCATTCTAGAAAAGGATACTGTTCTACCTCAGAATaGCTTATCATGTCACTTTCT | + |
Preference number: 5 (lower is better) Translates to: RDYSDYSRSDYEHSRKGYCSTSE*LIMSLS Trigger: AGAAAGTGACATGATAAGCAATTCTGAGGTAGAACA...GTATCCTTTTCTAGAATGCTCATAGTCTGACCGGCTGTAATCAGAGTAGTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GGTCATAAGTTAGTTGGCTATTTCATTAGAGCATTACAAAGCATAGCTTGGCAAACGAATTTCCAAGTTTaGTGTTCTACAGCAAGGGTC | + |
Preference number: 5 (lower is better) Translates to: GHKLVGYFIRALQSIAWQTNFQV*CSTARV Trigger: GACCCTTGCTGTAGAACACAAAACTTGGAAATTCGT...TTGCCAAGCTATGCTTTGTAATGCTCTAATGAAATAGCCAACTAACTTATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | CAGGAACAGATTGTAGATAAAAACATCTTAGTGTACCGTAGGATAATTTGGGATAAAACCTTGAGTAGCTaGTTATTTGTGCTCCCATTG | + |
Preference number: 5 (lower is better) Translates to: QEQIVDKNILVYRRIIWDKTLSS*LFVLPL Trigger: CAATGGGAGCACAAATAACAAGCTACTCAAGGTTTT...ATCCCAAATTATCCTACGGTACACTAAGATGTTTTTATCTACAATCTGTTCCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCATAACCTCAGTTGGTTaGATGATACAAAATGTGGAG | + |
Preference number: 5 (lower is better) Translates to: VGIEKNTEKEISEMVLEIITSVG*MIQNVE Trigger: CTCCACATTTTGTATCATCAAACCAACTGAGGTTAT...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS-3UTR CAA 90 bp | GTAGGGATTGAGAAAAATACAGAAAAAGAGATATCGGAAATGGTCCTGGAAATCTGTTCTACCTCAGAATaGCTTATCATGTCACTTTCT | + |
Preference number: 5 (lower is better) Translates to: VGIEKNTEKEISEMVLEICSTSE*LIMSLS Trigger: AGAAAGTGACATGATAAGCAATTCTGAGGTAGAACA...GATTTCCAGGACCATTTCCGATATCTCTTTTTCTGTATTTTTCTCAATCCCTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | AGTCTCCATTGCAATGGACAAACAAGTTCCTTCTGCTaGGGCCGGCTTCTGTGTGCTATTTCCTCCCAGAAT | + |
Preference number: 6 (lower is better) Translates to: SLHCNGQTSSFC*GRLLCAISSQN Trigger: ATTCTGGGAGGAAATAGCACACAGAAGCCGGCCTCAGCAGAAGGAACTTGTTTGTCCATTGCAATGGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 72 bp | ACAAACAAGTTCCTTCTGCTGAGGCCGGCTTCTGTGTaGTATTTCCTCCCAGAATTCTCTGAGGGTAATCAC | + |
Preference number: 6 (lower is better) Translates to: TNKFLLLRPASV*YFLPEFSEGNH Trigger: GTGATTACCCTCAGAGAATTCTGGGAGGAAATAGCACACAGAAGCCGGCCTCAGCAGAAGGAACTTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | GCTTCAATCTTCTCTCTACATACAGAGCCCAGGCTGGTCATACCATaGTCCCAGTACTTCTTAAGAGTAGCCAAGTCTCGGTCACTGAAT | + |
Preference number: 6 (lower is better) Translates to: ASIFSLHTEPRLVIP*SQYFLRVAKSRSLN Trigger: ATTCAGTGACCGAGACTTGGCTACTCTTAAGAAGTACTGGGACAATGGTATGACCAGCCTGGGCTCTGTATGTAGAGAGAAGATTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | TCAATTTTGCAAGGTCGCTGGCACACAGATGGCTTTTaGGGTACTGTCATTTCTGAAGCTTGCACCGGAGAA | + |
Preference number: 6 (lower is better) Translates to: SILQGRWHTDGF*GTVISEACTGE Trigger: TTCTCCGGTGCAAGCTTCAGAAATGACAGTACCTCAAAAGCCATCTGTGTGCCAGCGACCTTGCAAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | ACACTGAGTGAGGTATCATCAGGATCCGGCGAGGCATaGCTGCAATCCATCTCTTCTAATTCTGGAGGTAAA | + |
Preference number: 6 (lower is better) Translates to: TLSEVSSGSGEA*LQSISSNSGGK Trigger: TTTACCTCCAGAATTAGAAGAGATGGATTGCAGTCATGCCTCGCCGGATCCTGATGATACCTCACTCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | TGTCTGAGGCATTTTTCTCTGATAAAGAAGACACACTaGGTGAGGTATCATCAGGATCCGGCGAGGCATGAC | + |
Preference number: 6 (lower is better) Translates to: CLRHFSLIKKTH*VRYHQDPARHD Trigger: GTCATGCCTCGCCGGATCCTGATGATACCTCACTCAGTGTGTCTTCTTTATCAGAGAAAAATGCCTCAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 72 bp | ATCTGCAGATACTGCCTGGTGCTCTTCATCCTTATGTaGCCTGGTCTCATTTGGGATAAGTTCATTGGACTC | + |
Preference number: 6 (lower is better) Translates to: ICRYCLVLFILM*PGLIWDKFIGL Trigger: GAGTCCAATGAACTTATCCCAAATGAGACCAGGGCACATAAGGATGAAGAGCACCAGGCAGTATCTGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 72 bp | GTGAATTTGGCAGGTTTCTTCCTGGTCCAGGCAAATTaGTACTTTGGTTCTCAGCTCGAAGGGAATTGCCAC | + |
Preference number: 6 (lower is better) Translates to: VNLAGFFLVQAN*YFGSQLEGNCH Trigger: GTGGCAATTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCCTGGACCAGGAAGAAACCTGCCAAATTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | CTGGCACACAGATGGCTTTTGAGGTACTGTCATTTCTaGAGCTTGCACCGGAGAACTTCCATAGCTTTTCTT | + |
Preference number: 6 (lower is better) Translates to: LAHRWLLRYCHF*SLHRRTSIAFL Trigger: AAGAAAAGCTATGGAAGTTCTCCGGTGCAAGCTTCAGAAATGACAGTACCTCAAAAGCCATCTGTGTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | GATGCCAGACCTGCATGTTCAGGTTTATATGACCTTTaGATCCCAACTGGTTCAATTTTGCAAGGTCGCTGG | + |
Preference number: 6 (lower is better) Translates to: DARPACSGLYDL*IPTGSILQGRW Trigger: CCAGCGACCTTGCAAAATTGAACCAGTTGGGATTCAAAGGTCATATAAACCTGAACATGCAGGTCTGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | TACTTCTTAAGAGTAGCCAAGTCTCGGTCACTGAATTaGGTGCGGTCCTGTAGTGCTCTTTTCCTAGAACAC | + |
Preference number: 6 (lower is better) Translates to: YFLRVAKSRSLN*VRSCSALFLEH Trigger: GTGTTCTAGGAAAAGAGCACTACAGGACCGCACTCAATTCAGTGACCGAGACTTGGCTACTCTTAAGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | CTGGTCTCATTTGGGATAAGTTCATTGGACTCCTCTTaGGAGCTTGCTTCGGACAAACAGATGGACACTTCA | + |
Preference number: 6 (lower is better) Translates to: LVSFGISSLDSS*ELASDKQMDTS Trigger: TGAAGTGTCCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAGTCCAATGAACTTATCCCAAATGAGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 72 bp | TGTGTTCTACAGCAAGGGTCTCTAATGGTTGGCTTTTaGCCACATAAGTTATGTGATGCCAGACCTGCATGT | + |
Preference number: 6 (lower is better) Translates to: CVLQQGSLMVGF*PHKLCDARPAC Trigger: ACATGCAGGTCTGGCATCACATAACTTATGTGGGCAAAAGCCAACCATTAGAGACCCTTGCTGTAGAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 72 bp | TGGCAGGTTTCTTCCTGGTCCAGGCAAATTTGTACTTaGGTTCTCAGCTCGAAGGGAATTGCCACTTTCATA | + |
Preference number: 6 (lower is better) Translates to: WQVSSWSRQICT*VLSSKGIATFI Trigger: TATGAAAGTGGCAATTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCCTGGACCAGGAAGAAACCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | CTTATGTGCCCTGGTCTCATTTGGGATAAGTTCATTGGACTCCTCTaGAGAGCTTGCTTCGGACAAACAGATGGACACTTCATCATTTCT | + |
Preference number: 6 (lower is better) Translates to: LMCPGLIWDKFIGLL*RACFGQTDGHFIIS Trigger: AGAAATGATGAAGTGTCCATCTGTTTGTCCGAAGCAAGCTCTCAAGAGGAGTCCAATGAACTTATCCCAAATGAGACCAGGGCACATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 72 bp | GATTCACAGCTTTTACTACTCATTTTTCTTCGCTTATaGCCAACCCACGTCCTGACTACACTGAAGTCCAGC | + |
Preference number: 6 (lower is better) Translates to: DSQLLLLIFLRL*PTHVLTTLKSS Trigger: GCTGGACTTCAGTGTAGTCAGGACGTGGGTTGGCAATAAGCGAAGAAAAATGAGTAGTAAAAGCTGTGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113422.9 |
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CDS CAA 90 bp | GATGAGCTTACTGGACTGTATATACCAGTTACAATGACATCATTATaGGCAGAAGTCCAAGAAGATTGCTGGCTTGAAGGGCGGGCAATA | + |
Preference number: 6 (lower is better) Translates to: DELTGLYIPVTMTSL*AEVQEDCWLEGRAI Trigger: TATTGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGTAAGCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | TGCCACTTTCATAAAACCTTGAGTAGCTTGTTATTTGTGCTCCCATaGATGCCAGTTCTTCTTCTCTGGCATATTCATCCTCTGCGTCTC | + |
Preference number: 6 (lower is better) Translates to: CHFHKTLSSLLFVLP*MPVLLLWHIHPLRL Trigger: GAGACGCAGAGGATGAATATGCCAGAGAAGAAGAACTGGCATCAATGGGAGCACAAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | TCTCAGCTCGAAGGGAATTGCCACTTTCATAAAACCTTGAGTAGCTaGTTATTTGTGCTCCCATTGATGCCAGTTCTTCTTCTCTGGCAT | + |
Preference number: 6 (lower is better) Translates to: SQLEGNCHFHKTLSS*LFVLPLMPVLLLWH Trigger: ATGCCAGAGAAGAAGAACTGGCATCAATGGGAGCACAAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCAATTCCCTTCGAGCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | TCCCAATCCAAGTCCGAACTATTTCACAGTCGACATTTAATTCAATaGCAACAGCTTCAATCTTCTCTCTACATACAGAGCCCAGGCTGG | + |
Preference number: 6 (lower is better) Translates to: SQSKSELFHSRHLIQ*QQLQSSLYIQSPGW Trigger: CCAGCCTGGGCTCTGTATGTAGAGAGAAGATTGAAGCTGTTGCAATTGAATTAAATGTCGACTGTGAAATAGTTCGGACTTGGATTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | ATCATTATTGGCAGAAGTCCAAGAAGATTGCTGGCTTaGAGGGCGGGCAATATTAACCACATTTCTGACTGT | + |
Preference number: 6 (lower is better) Translates to: IIIGRSPRRLLA*RAGNINHISDC Trigger: ACAGTCAGAAATGTGGTTAATATTGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTCTGCCAATAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 72 bp | GTTTATATGACCTTTGAATCCCAACTGGTTCAATTTTaGAAGGTCGCTGGCACACAGATGGCTTTTGAGGTA | + |
Preference number: 6 (lower is better) Translates to: VYMTFESQLVQF*KVAGTQMAFEV Trigger: TACCTCAAAAGCCATCTGTGTGCCAGCGACCTTGCAAAATTGAACCAGTTGGGATTCAAAGGTCATATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CCA 72 bp | ATGACATCATTATTGGCAGAAGTCCAAGAAGATTGCTaGCTTGAAGGGCGGGCAATATTAACCACATTTCTG | + |
Preference number: 6 (lower is better) Translates to: MTSLLAEVQEDC*LEGRAILTTFL Trigger: CAGAAATGTGGTTAATATTGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTCTGCCAATAATGATGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 72 bp | TCTCAGCTCGAAGGGAATTGCCACTTTCATAAAACCTaGAGTAGCTTGTTATTTGTGCTCCCATTGATGCCA | + |
Preference number: 6 (lower is better) Translates to: SQLEGNCHFHKT*SSLLFVLPLMP Trigger: TGGCATCAATGGGAGCACAAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCAATTCCCTTCGAGCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | TCACCATTTGTGAATTTGGCAGGTTTCTTCCTGGTCCAGGCAAATTaGTACTTTGGTTCTCAGCTCGAAGGGAATTGCCACTTTCATAAA | + |
Preference number: 6 (lower is better) Translates to: SPFVNLAGFFLVQAN*YFGSQLEGNCHFHK Trigger: TTTATGAAAGTGGCAATTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGCCTGGACCAGGAAGAAACCTGCCAAATTCACAAATGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | AGTATTACTGTACATAGTACTAGATGCTGTATGCAATaGGGTCCGTGGTGTCAAATGGTAGTCTCTAGTCTG | + |
Preference number: 6 (lower is better) Translates to: SITVHSTRCCMQ*GPWCQMVVSSL Trigger: CAGACTAGAGACTACCATTTGACACCACGGACCTCATTGCATACAGCATCTAGTACTATGTACAGTAATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 72 bp | ACAATGACATCATTATTGGCAGAAGTCCAAGAAGATTaGTGGCTTGAAGGGCGGGCAATATTAACCACATTT | + |
Preference number: 6 (lower is better) Translates to: TMTSLLAEVQED*WLEGRAILTTF Trigger: AAATGTGGTTAATATTGCCCGCCCTTCAAGCCAGCAATCTTCTTGGACTTCTGCCAATAATGATGTCATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 72 bp | CTGAAGCTTGCACCGGAGAACTTCCATAGCTTTTCTTaGTGTGATTGTACACTGAGTTTCCAGCATTTAGTA | + |
Preference number: 6 (lower is better) Translates to: LKLAPENFHSFS*CDCTLSFQHLV Trigger: TACTAAATGCTGGAAACTCAGTGTACAATCACACAAAGAAAAGCTATGGAAGTTCTCCGGTGCAAGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | CTGTCATTTCTGAAGCTTGCACCGGAGAACTTCCATAGCTTTTCTTaGTGTGATTGTACACTGAGTTTCCAGCATTTAGTACACTTGTCT | + |
Preference number: 6 (lower is better) Translates to: LSFLKLAPENFHSFS*CDCTLSFQHLVHLS Trigger: AGACAAGTGTACTAAATGCTGGAAACTCAGTGTACAATCACACAAAGAAAAGCTATGGAAGTTCTCCGGTGCAAGCTTCAGAAATGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 90 bp | TACTTTGGTTCTCAGCTCGAAGGGAATTGCCACTTTCATAAAACCTaGAGTAGCTTGTTATTTGTGCTCCCATTGATGCCAGTTCTTCTT | + |
Preference number: 6 (lower is better) Translates to: YFGSQLEGNCHFHKT*SSLLFVLPLMPVLL Trigger: AAGAAGAACTGGCATCAATGGGAGCACAAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCAATTCCCTTCGAGCTGAGAACCAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CAA 72 bp | GAAGGGAATTGCCACTTTCATAAAACCTTGAGTAGCTaGTTATTTGTGCTCCCATTGATGCCAGTTCTTCTT | + |
Preference number: 6 (lower is better) Translates to: EGNCHFHKTLSS*LFVLPLMPVLL Trigger: AAGAAGAACTGGCATCAATGGGAGCACAAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCAATTCCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | AGCACAGAAGCATTCTTACAGTGCGCTACTTGTCTTTaGACAGGAATGTGCAATTGTAATTCAGTGTCATTT | + |
Preference number: 6 (lower is better) Translates to: STEAFLQCATCL*TGMCNCNSVSF Trigger: AAATGACACTGAATTACAATTGCACATTCCTGTTCAAAGACAAGTAGCGCACTGTAAGAATGCTTCTGTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS CCA 72 bp | ATAATTTCTATTTTCACATTATCTGCAGATACTGCCTaGTGCTCTTCATCCTTATGTGCCCTGGTCTCATTT | + |
Preference number: 6 (lower is better) Translates to: IISIFTLSADTA*CSSSLCALVSF Trigger: AAATGAGACCAGGGCACATAAGGATGAAGAGCACCAGGCAGTATCTGCAGATAATGTGAAAATAGAAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS TCA 72 bp | TTGATGAGCTTACTGGACTGTATATACCAGTTACAATaGCATCATTATTGGCAGAAGTCCAAGAAGATTGCT | + |
Preference number: 6 (lower is better) Translates to: LMSLLDCIYQLQ*HHYWQKSKKIA Trigger: AGCAATCTTCTTGGACTTCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGTAAGCTCATCAA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |
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CDS GCA 72 bp | GCAAATTTGTACTTTGGTTCTCAGCTCGAAGGGAATTaGCACTTTCATAAAACCTTGAGTAGCTTGTTATTT | + |
Preference number: 6 (lower is better) Translates to: ANLYFGSQLEGN*HFHKTLSSLLF Trigger: AAATAACAAGCTACTCAAGGTTTTATGAAAGTGGCAATTCCCTTCGAGCTGAGAACCAAAGTACAAATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038472.7 ENSMUST00000113422.9 |