Pregenerated sensors for HDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027360Ensembl transcript IDs: ENSMUST00000028838.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACCTGGCGGTGGCGGGATaGCGTTCTTGGCCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNLAVAG*RSWPEG Trigger: GCCCTCGGGCCAAGAACGTCATCCCGCCACCGCCAG...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTGGGGGCTCTGCCAGTaGACCACCCCAGGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNWGLCQ*TTPGMM Trigger: CATCATGCCTGGGGTGGTTCACTGGCAGAGCCCCCA...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAGCACTCGCAGGTAGCTaGGCTCGCAGGTATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEALAGS*ARRYPG Trigger: GCCTGGATACCTGCGAGCCCAGCTACCTGCGAGTGC...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGGGATCTGCCAATGCATaGAGTCCGTGGCTGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: HIISTQTARNFEGFPNSLGSANA*SPWLHQ Trigger: CTGGTGCAGCCACGGACTTCATGCATTGGCAGATCC...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACAGCGTCTGCGGGGAGTaGCTTCTGGGCACTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNSVCGE*LLGTHR Trigger: CCTATGAGTGCCCAGAAGTCACTCCCCGCAGACGCT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAACCTCGGCTGCTGGGATaGTGGTGCAGGAAGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEPRLLG*WCRKYS Trigger: GGAGTACTTCCTGCACCACCATCCCAGCAGCCGAGG...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAACCTCACTGGCACAGATaGGCCCCAGTTCTGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEPHWHR*APVLTA Trigger: GGCTGTCAGAACTGGGGCCCATCTGTGCCAGTGAGG...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACGCCACAGTCCCTCACTaGCACAGATGGGCCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNATVPH*HRWAPV Trigger: AACTGGGGCCCATCTGTGCCAGTGAGGGACTGTGGC...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGTGTGCTTGGTGGTGTTaGGGGCCTCTTCCGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HIISTQTARNFEGFPNSLCAWWC*GPLPRS Trigger: GCTTCTCGGAAGAGGCCCCCAACACCACCAAGCACA...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAGCCTCTCCCGCACAGTaGTCAGGTACTGGGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEASPAQ*SGTGRC Trigger: ACATCTCCCAGTACCTGAGCACTGTGCGGGAGAGGC...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACCGCCAGACTGGCTCCTaGCTGCTTGATGATCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNRQTGS*LLDDLP Trigger: CGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCG...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACACAGCTTGTGCTTGGTaGTGTTGGGGGCCTCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNTACAW*CWGPLP Trigger: CGGAAGAGGCCCCCAACACCACCAAGCACAAGCTGT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGACGACAGCTTGTGCTTaGTGGTGTTGGGGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HIISTQTARNFEGFPNSLTTACA*WCWGPL Trigger: AAGAGGCCCCCAACACCACCAAGCACAAGCTGTCGT...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAACCCGGAAAAGATTCTaGCCCGGAAGGAGCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPETRKRF*PGRSPH Trigger: ATGGGGGCTCCTTCCGGGCCAGAATCTTTTCCGGGT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCGCCAGCCAGTCCATaGTGTTCATCTCCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNSPASP*CSSPAL Trigger: CAGAGCTGGAGATGAACATCATGGACTGGCTGGCGA...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACGATGGGCCCCAGTTCTaGCAGCCTGTCAAATGCACA | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNDGPQF*QPVKCT Trigger: TGTGCATTTGACAGGCTGTCAGAACTGGGGCCCATC...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACACATTTGGAGTCACCTaGCTCTCCCGCACAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNTFGVT*LSRTVL Trigger: GAGCACTGTGCGGGAGAGGCAGGTGACTCCAAATGT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACCAGAAAGGCCGTGCCTaGATAAGCAGCATCGACGTG | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNQKGRA*ISSIDV Trigger: CACGTCGATGCTGCTTATGCAGGCACGGCCTTTCTG...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACGGCACAGAAAGGCCGTaGCTGCATAAGCAGCATCGA | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNGTERP*LHKQHR Trigger: TCGATGCTGCTTATGCAGGCACGGCCTTTCTGTGCC...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACCATGAAGTCCGTGGCTaGACCAGAGTTGGCATGTCG | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNHEVRG*TRVGMS Trigger: CGACATGCCAACTCTGGTGCAGCCACGGACTTCATG...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGTGGGAAGTGCAGTGCTaGCTCAGGACAAGGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: HIISTQTARNFEGFPNSLWEVQC*LRTRLA Trigger: TGCTAACCTTGTCCTGAGCCAGCACTGCACTTCCCA...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAGCCCGAGGGCTCGGCTaGGAAGTGCAGTGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSARGLG*EVQCWL Trigger: GAGCCAGCACTGCACTTCCCAGCCGAGCCCTCGGGC...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCACACCTCCCCCTCGGCTaGTGGGATGGTGGTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSHLPLG*WDGGAG Trigger: TCCTGCACCACCATCCCAGCAGCCGAGGGGGAGGTG...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAGGACGGACAAGTAACTaGACAGAAAGGACGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEGRTSN*TERTTA Trigger: AGCTGTCGTCCTTTCTGTTCAGTTACTTGTCCGTCC...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCACGGCTGCTGGGATGGTaGTGCAGGAAGTACTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSRLLGW*CRKYSG Trigger: CCCGGAGTACTTCCTGCACCACCATCCCAGCAGCCG...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAAGGTTAGCAGCCTCTTaGATGAGGTGCCAATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPERLAAS*MRCQSL Trigger: GAGAGATTGGCACCTCATCCAAGAGGCTGCTAACCT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAATGTCTGACATGTGCTTaGAGATTCTTCACCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPECLTCA*RFFTPK Trigger: CTTCGGGGTGAAGAATCTTCAAGCACATGTCAGACA...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGTTCACACTAAAGGTCTaGTGCAGCTTGTACTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HIISTQTARNFEGFPNSLFTLKV*CSLYLS Trigger: GGACAAGTACAAGCTGCAGCAGACCTTTAGTGTGAA...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAACCACCAAACCAAGGTaGCTCTTAGCAGGAATTTCG | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPETTKPR*LLAGIS Trigger: CGAAATTCCTGCTAAGAGGCACCTTGGTTTGGTGGT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAGATCTTCCGGGCCTGTaGTGGGTCATCTCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSDLPGL*WVISSL Trigger: GAGGGAGGAGATGACCCAGCACAGGCCCGGAAGATC...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTTTCTGTGCCGTGTCTaGCATGTGCTTGAAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNFLCRV*HVLEDS Trigger: AGAATCTTCAAGCACATGTCAGACACGGCACAGAAA...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACAGGAAGGGTCGCTTCTaGCCAGAGATTCAAAGTATT | + |
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Preference number: 4 (lower is better) Translates to: HTHIISTQTARNFEGFPNRKGRF*PEIQSI Trigger: AATACTTTGAATCTCTGGTCAGAAGCGACCCTTCCT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAACACTAAAGGTCTGCTaGAGCTTGTACTTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPETLKVC*SLYLSL Trigger: CAAGGACAAGTACAAGCTGCAGCAGACCTTTAGTGT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAAAGGACGACAGCTTGTaGTTGGTGGTGTTGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSKDDSL*LVVLGA Trigger: GGCCCCCAACACCACCAAGCACAAGCTGTCGTCCTT...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAATGATCAGCTTGTCTTaGATAGTAGCCGGGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEMISLS*IVAGMR Trigger: TCTCATCCCGGCTACTATCCAAGACAAGCTGATCAT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCACGCAGGTATCCAGGCTaGACATTTGGAGTCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSRRYPG*TFGVTC Trigger: GCAGGTGACTCCAAATGTGCAGCCTGGATACCTGCG...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCATGGCTGCACCAGAGTTaGCATGTCGGAGGTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSWLHQS*HVGGRW Trigger: CCATCTACCTCCGACATGCCAACTCTGGTGCAGCCA...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CCA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGCATCATCATTTGTTCTaGGAACCCGGAAAAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: HIISTQTARNFEGFPNSLHHHLF*EPGKDS Trigger: AGAATCTTTTCCGGGTTCCCAGAACAAATGATGATG...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCACAATGTCCCCAAAGATaGTGTCCCAGCTGTCGGGTT | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSQCPQR*CPSCRV Trigger: AACCCGACAGCTGGGACAGCATCTTTGGGGACATTG...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR GCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAGAGCACACTGAGAACTaGATTCAGGAAAGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSEHTEN*IQESWG Trigger: TCCCCAGCTTTCCTGAATGCAGTTCTCAGTGTGCTC...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAGCTTGTACTTGTCCTTaGCCCAGAATCCAGTACAGT | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSACTCP*PRIQYS Trigger: ACTGTACTGGATTCTGGGTCAAGGACAAGTACAAGC...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR TCA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCACCACAGGTAGAAATCTaGTCTTCACAAGGGAAATCA | + |
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Preference number: 4 (lower is better) Translates to: FISKLFFTLQAQQHATVSPQVEI*SSQGKS Trigger: TGATTTCCCTTGTGAAGATCAGATTTCTACCTGTGG...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 90 bp | GTCCCTGGCGGTGGCGGGATGACGTTCTTGGCCCGAGGGCTCGGCTaGGAAGTGCAGTGCTGGCTCAGGACAAGGTTAGCAGCCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VPGGGGMTFLARGLG*EVQCWLRTRLAASW Trigger: CCAAGAGGCTGCTAACCTTGTCCTGAGCCAGCACTGCACTTCCCAGCCGAGCCCTCGGGCCAAGAACGTCATCCCGCCACCGCCAGGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 90 bp | GCCCTCCAGGAACCCCCGGAGCTCAGGGCACAGAAAGGCCGTGCCTaGATAAGCAGCATCGACGTGGAGCCACAGTCCCTCACTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: ALQEPPELRAQKGRA*ISSIDVEPQSLTGT Trigger: TGTGCCAGTGAGGGACTGTGGCTCCACGTCGATGCTGCTTATGCAGGCACGGCCTTTCTGTGCCCTGAGCTCCGGGGGTTCCTGGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 90 bp | CGATGCCCTCCAGGAACCCCCGGAGCTCAGGGCACAGAAAGGCCGTaGCTGCATAAGCAGCATCGACGTGGAGCCACAGTCCCTCACTGG | + |
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Preference number: 5 (lower is better) Translates to: RCPPGTPGAQGTERP*LHKQHRRGATVPHW Trigger: CCAGTGAGGGACTGTGGCTCCACGTCGATGCTGCTTATGCAGGCACGGCCTTTCTGTGCCCTGAGCTCCGGGGGTTCCTGGAGGGCATCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 90 bp | GGCGGGATGACGTTCTTGGCCCGAGGGCTCGGCTGGGAAGTGCAGTaGTGGCTCAGGACAAGGTTAGCAGCCTCTTGGATGAGGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGMTFLARGLGWEVQ*WLRTRLAASWMRCQ Trigger: TTGGCACCTCATCCAAGAGGCTGCTAACCTTGTCCTGAGCCAGCACTGCACTTCCCAGCCGAGCCCTCGGGCCAAGAACGTCATCCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS GCA 90 bp | TCCAGATCAGAGCCGCCTTCCCTTCTCGCCAGACTGGCTCCTGGCTaGTTGATGATCTTCCGGGCCTGTGCTGGGTCATCTCCTCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSEPPSLLARLAPG*LMIFRACAGSSPPS Trigger: CGAGGGAGGAGATGACCCAGCACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCGAGAAGGGAAGGCGGCTCTGATCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CCA 90 bp | ATGCTGTCCCAGCTGTCGGGTTCCTCGGGAGCACTCGCAGGTAGCTaGGCTCGCAGGTATCCAGGCTGCACATTTGGAGTCACCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MLSQLSGSSGALAGS*ARRYPGCTFGVTCL Trigger: GAGGCAGGTGACTCCAAATGTGCAGCCTGGATACCTGCGAGCCCAGCTACCTGCGAGTGCTCCCGAGGAACCCGACAGCTGGGACAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 90 bp | CGTTTCCAGATCAGAGCCGCCTTCCCTTCTCGCCAGACTGGCTCCTaGCTGCTTGATGATCTTCCGGGCCTGTGCTGGGTCATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFQIRAAFPSRQTGS*LLDDLPGLCWVISS Trigger: GGAGGAGATGACCCAGCACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCGAGAAGGGAAGGCGGCTCTGATCTGGAAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 90 bp | AAGGAGCCCCCATTCTTCAGTGAAGCGTCTGCGGGGAGTGACTTCTaGGCACTCATAGGCACACTGTTGCAGCTGAGGGACCGCGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEPPFFSEASAGSDF*ALIGTLLQLRDRVV Trigger: GACAACGCGGTCCCTCAGCTGCAACAGTGTGCCTATGAGTGCCCAGAAGTCACTCCCCGCAGACGCTTCACTGAAGAATGGGGGCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGCTGGCTCCTGGCTGCTaGATGATCTTCCGGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLLAPGC*MIFRAC Trigger: ACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAG...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAGACGACAGCTTGTGCTaGGTGGTGTTGGGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEDDSLC*VVLGAS Trigger: AGAGGCCCCCAACACCACCAAGCACAAGCTGTCGTC...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS TCA 90 bp | TTTTGTTCTTTCTTGCTGCCAGCAGGGCAATTAAAGTGGATTCGCTaGCAGTGCTCTGTAAGACACCTCCCCCTCGGCTGCTGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: FCSFLLPAGQLKWIR*QCSVRHLPLGCWDG Trigger: ACCATCCCAGCAGCCGAGGGGGAGGTGTCTTACAGAGCACTGTCAGCGAATCCACTTTAATTGCCCTGCTGGCAGCAAGAAAGAACAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACATCCAGGCTGCACATTaGGAGTCACCTGCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HTHIISTQTARNFEGFPNIQAAH*ESPASP Trigger: GGGAGAGGCAGGTGACTCCAAATGTGCAGCCTGGAT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAGGCACCAAGCCCTGTaGCTTGTCTTCCTCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLRHQAL*LVFLNS Trigger: GCTATTGAGGAAGACAAGCAACAGGGCTTGGTGCCT...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAAGAAAGGACGACAGCTaGTGCTTGGTGGTGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HNKHTNCTQFRGVPQLPERKDDS*CLVVLG Trigger: CCCCAACACCACCAAGCACAAGCTGTCGTCCTTTCT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS GCA 90 bp | GTGAGACAATTAGGACCCTTCAGACGGAAAACCACCAAACCAAGGTaGCTCTTAGCAGGAATTTCGAAGGAAGGGTCGCTTCTGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRQLGPFRRKTTKPR*LLAGISKEGSLLTR Trigger: TCTGGTCAGAAGCGACCCTTCCTTCGAAATTCCTGCTAAGAGGCACCTTGGTTTGGTGGTTTTCCGTCTGAAGGGTCCTAATTGTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGTGCTGCAGCTTGTACTaGTCCTTGACCCAGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLCCSLY*SLTQNP Trigger: TGGATTCTGGGTCAAGGACAAGTACAAGCTGCAGCA...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAAAGGTCTGCTGCAGCTaGTACTTGTCCTTGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEKVCCS*YLSLTQ Trigger: CTGGGTCAAGGACAAGTACAAGCTGCAGCAGACCTT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAACGGATGATCAGCTaGTCTTGGATAGTAGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLKRMIS*SWIVAG Trigger: CCCGGCTACTATCCAAGACAAGCTGATCATCCGTTT...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS TCA 90 bp | GAGCTTCTCCTCGGAGTGAGAAGTTGTCGTCCACAGGTAGAAATCTaGTCTTCACAAGGGAAATCAAGCCAGCCTTCTCCACTGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELLLGVRSCRPQVEI*SSQGKSSQPSPLKS Trigger: ACTCTTCAGTGGAGAAGGCTGGCTTGATTTCCCTTGTGAAGATCAGATTTCTACCTGTGGACGACAACTTCTCACTCCGAGGAGAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CCA 90 bp | GTGGTAAACTGGGATGTCACAGTGAAACGGATGATCAGCTTGTCTTaGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGCTTTGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: VVNWDVTVKRMISLS*IVAGMRKSWPALAI Trigger: AATAGCCAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCGTTTCACTGTGACATCCCAGTTTACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAACCTCGGAGTGAGAAGTaGTCGTCCACAGGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HNKHTNCTQFRGVPQLPEPRSEK*SSTGRN Trigger: ATTTCTACCTGTGGACGACAACTTCTCACTCCGAGG...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACAAGGTTAGCAGCCTCTaGGATGAGGTGCCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTHIISTQTARNFEGFPNKVSSL*DEVPIS Trigger: AGAGATTGGCACCTCATCCAAGAGGCTGCTAACCTT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACAGCTTGTACTTGTCCTaGACCCAGAATCCAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: HTHIISTQTARNFEGFPNSLYLS*TQNPVQ Trigger: CTGTACTGGATTCTGGGTCAAGGACAAGTACAAGCT...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAGAGCTGGCCAGCTTaGGCTATTTCCTTTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLKSWPA*AISFNT Trigger: TGTGTTAAAGGAAATAGCCAAAGCTGGCCAGCTCTT...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CCA 90 bp | CGGATGATCAGCTTGTCTTGGATAGTAGCCGGGATGAGAAAGAGCTaGCCAGCTTTGGCTATTTCCTTTAACACACTTTCTGTGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: RMISLSWIVAGMRKS*PALAISFNTLSVRQ Trigger: TTGTCTCACAGAAAGTGTGTTAAAGGAAATAGCCAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS-3UTR CAA 90 bp | CACACACACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACGGATTTTGTTCTTTCTaGCTGCCAGCAGGGCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: HTHIISTQTARNFEGFPNGFCSF*LPAGQL Trigger: TAATTGCCCTGCTGGCAGCAAGAAAGAACAAAATCC...GTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGTTCATTGCTAGGATTTaGTTCTTTCTTGCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLFIARI*FFLAAS Trigger: GCTGGCAGCAAGAAAGAACAAAATCCTAGCAATGAA...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | CACATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGGCTCGCATGCTTTCATaGCTAGGATTTTGTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HIISTQTARNFEGFPNSLARMLS*LGFCSF Trigger: GAAAGAACAAAATCCTAGCAATGAAAGCATGCGAGC...CAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | CATAATAAGCACACAAACTGCACGCAATTTCGAGGGGTTCCCCAACTCCCTGAAAACTTGATCAGCTTTTaGAAGGCACCTTTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HNKHTNCTQFRGVPQLPENLISF*KAPFFI Trigger: GATGAAGAAAGGTGCCTTCAAAAAGCTGATCAAGTT...TTCAGGGAGTTGGGGAACCCCTCGAAATTGCGTGCAGTTTGTGTGCTTATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAGATGATCAGCTTGTCTaGGATAGTAGCCGGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FISKLFFTLQAQQHATVSDDQLV*DSSRDE Trigger: CTCATCCCGGCTACTATCCAAGACAAGCTGATCATC...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAACCAAGCCCTGTTGCTaGTCTTCCTCAATAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FISKLFFTLQAQQHATVSTKPCC*SSSIAF Trigger: GAAAGCTATTGAGGAAGACAAGCAACAGGGCTTGGT...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCAGTGTCTGACATGTGCTaGAAGATTCTTCACCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FISKLFFTLQAQQHATVSVSDMC*KILHPE Trigger: TTCGGGGTGAAGAATCTTCAAGCACATGTCAGACAC...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCATGTACCATCATCCACTaGGAAGGGTTAAAGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FISKLFFTLQAQQHATVSCTIIH*EGLKVK Trigger: CTTCACCTTTAACCCTTCCAAGTGGATGATGGTACA...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTAAGTTGTTTTTCACATTACAAGCTCAACAGCACGCCACCGTCTCACTTCATCATCATCATTaGTTCTGGGAACCCGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FISKLFFTLQAQQHATVSLHHHH*FWEPGK Trigger: TTTTCCGGGTTCCCAGAACAAATGATGATGATGAAG...TGAGACGGTGGCGTGCTGTTGAGCTTGTAATGTGAAAAACAACTTAGAAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS TCA 72 bp | CCAGGGATAGCCCTCTGGTCCCTGGCGGTGGCGGGATaGCGTTCTTGGCCCGAGGGCTCGGCTGGGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGIALWSLAVAG*RSWPEGSAGKC Trigger: GCACTTCCCAGCCGAGCCCTCGGGCCAAGAACGTCATCCCGCCACCGCCAGGGACCAGAGGGCTATCCCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CAA 72 bp | AGCCCTCTGGTCCCTGGCGGTGGCGGGATGACGTTCTaGGCCCGAGGGCTCGGCTGGGAAGTGCAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPLVPGGGGMTF*ARGLGWEVQCW Trigger: CCAGCACTGCACTTCCCAGCCGAGCCCTCGGGCCAAGAACGTCATCCCGCCACCGCCAGGGACCAGAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | TCCAGGGATAGCCCTCTGGTCCCTGGCGGTGGCGGGATGACGTTCTaGGCCCGAGGGCTCGGCTGGGAAGTGCAGTGCTGGCTCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SRDSPLVPGGGGMTF*ARGLGWEVQCWLRT Trigger: TGTCCTGAGCCAGCACTGCACTTCCCAGCCGAGCCCTCGGGCCAAGAACGTCATCCCGCCACCGCCAGGGACCAGAGGGCTATCCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 72 bp | GAACCCCCGGAGCTCAGGGCACAGAAAGGCCGTGCCTaGATAAGCAGCATCGACGTGGAGCCACAGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EPPELRAQKGRA*ISSIDVEPQSL Trigger: GAGGGACTGTGGCTCCACGTCGATGCTGCTTATGCAGGCACGGCCTTTCTGTGCCCTGAGCTCCGGGGGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 72 bp | CCAGGAACCCCCGGAGCTCAGGGCACAGAAAGGCCGTaGCTGCATAAGCAGCATCGACGTGGAGCCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGTPGAQGTERP*LHKQHRRGATV Trigger: GACTGTGGCTCCACGTCGATGCTGCTTATGCAGGCACGGCCTTTCTGTGCCCTGAGCTCCGGGGGTTCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 72 bp | GTGCTCTGTAAGACACCTCCCCCTCGGCTGCTGGGATaGTGGTGCAGGAAGTACTCCGGGAGCCCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLCKTPPPRLLG*WCRKYSGSPSI Trigger: GATGCTGGGGCTCCCGGAGTACTTCCTGCACCACCATCCCAGCAGCCGAGGGGGAGGTGTCTTACAGAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | AGATCAGAGCCGCCTTCCCTTCTCGCCAGACTGGCTCCTGGCTGCTaGATGATCTTCCGGGCCTGTGCTGGGTCATCTCCTCCCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSEPPSLLARLAPGC*MIFRACAGSSPPSL Trigger: CAGCGAGGGAGGAGATGACCCAGCACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCGAGAAGGGAAGGCGGCTCTGATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS GCA 72 bp | GAGCCGCCTTCCCTTCTCGCCAGACTGGCTCCTGGCTaGTTGATGATCTTCCGGGCCTGTGCTGGGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: EPPSLLARLAPG*LMIFRACAGSS Trigger: AGATGACCCAGCACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCGAGAAGGGAAGGCGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CCA 72 bp | CTCTGTAAGACACCTCCCCCTCGGCTGCTGGGATGGTaGTGCAGGAAGTACTCCGGGAGCCCCAGCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCKTPPPRLLGW*CRKYSGSPSIF Trigger: GAAGATGCTGGGGCTCCCGGAGTACTTCCTGCACCACCATCCCAGCAGCCGAGGGGGAGGTGTCTTACAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CCA 72 bp | ATCAGAGCCGCCTTCCCTTCTCGCCAGACTGGCTCCTaGCTGCTTGATGATCTTCCGGGCCTGTGCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IRAAFPSRQTGS*LLDDLPGLCWV Trigger: GACCCAGCACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCGAGAAGGGAAGGCGGCTCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CAA 72 bp | CCGCCTTCCCTTCTCGCCAGACTGGCTCCTGGCTGCTaGATGATCTTCCGGGCCTGTGCTGGGTCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPSLLARLAPGC*MIFRACAGSSP Trigger: AGGAGATGACCCAGCACAGGCCCGGAAGATCATCAAGCAGCCAGGAGCCAGTCTGGCGAGAAGGGAAGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CAA 90 bp | GAGCACTCGCAGGTAGCTGGGCTCGCAGGTATCCAGGCTGCACATTaGGAGTCACCTGCCTCTCCCGCACAGTGCTCAGGTACTGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EHSQVAGLAGIQAAH*ESPASPAQCSGTGR Trigger: TCTCCCAGTACCTGAGCACTGTGCGGGAGAGGCAGGTGACTCCAAATGTGCAGCCTGGATACCTGCGAGCCCAGCTACCTGCGAGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS GCA 72 bp | ACGTTCTTGGCCCGAGGGCTCGGCTGGGAAGTGCAGTaGTGGCTCAGGACAAGGTTAGCAGCCTCTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TFLARGLGWEVQ*WLRTRLAASWM Trigger: CATCCAAGAGGCTGCTAACCTTGTCCTGAGCCAGCACTGCACTTCCCAGCCGAGCCCTCGGGCCAAGAACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS CCA 72 bp | TTCTTGGCCCGAGGGCTCGGCTGGGAAGTGCAGTGCTaGCTCAGGACAAGGTTAGCAGCCTCTTGGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLARGLGWEVQC*LRTRLAASWMR Trigger: CCTCATCCAAGAGGCTGCTAACCTTGTCCTGAGCCAGCACTGCACTTCCCAGCCGAGCCCTCGGGCCAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS TCA 72 bp | AGCGAAAGCGCCGGCTCAAGGGGATCTGCCAATGCATaGAGTCCGTGGCTGCACCAGAGTTGGCATGTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SESAGSRGSANA*SPWLHQSWHVG Trigger: TCCGACATGCCAACTCTGGTGCAGCCACGGACTTCATGCATTGGCAGATCCCCTTGAGCCGGCGCTTTCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS GCA 72 bp | GCTCGCAGGTATCCAGGCTGCACATTTGGAGTCACCTaGCTCTCCCGCACAGTGCTCAGGTACTGGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: ARRYPGCTFGVT*LSRTVLRYWEM Trigger: CATCTCCCAGTACCTGAGCACTGTGCGGGAGAGGCAGGTGACTCCAAATGTGCAGCCTGGATACCTGCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
||
| CDS TCA 72 bp | CCACAGTCCCTCACTGGCACAGATGGGCCCCAGTTCTaGCAGCCTGTCAAATGCACAGACTCCAGTAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQSLTGTDGPQF*QPVKCTDSSSP Trigger: GGGACTACTGGAGTCTGTGCATTTGACAGGCTGTCAGAACTGGGGCCCATCTGTGCCAGTGAGGGACTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 72 bp | ATGGAGCGAAAGCGCCGGCTCAAGGGGATCTGCCAATaGATGAAGTCCGTGGCTGCACCAGAGTTGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: MERKRRLKGICQ*MKSVAAPELAC Trigger: ACATGCCAACTCTGGTGCAGCCACGGACTTCATGCATTGGCAGATCCCCTTGAGCCGGCGCTTTCGCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 72 bp | AGCTTAATGGAGCGAAAGCGCCGGCTCAAGGGGATCTaGCAATGCATGAAGTCCGTGGCTGCACCAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLMERKRRLKGI*QCMKSVAAPEL Trigger: CAACTCTGGTGCAGCCACGGACTTCATGCATTGGCAGATCCCCTTGAGCCGGCGCTTTCGCTCCATTAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 72 bp | CCATTCTTCAGTGAAGCGTCTGCGGGGAGTGACTTCTaGGCACTCATAGGCACACTGTTGCAGCTGAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PFFSEASAGSDF*ALIGTLLQLRD Trigger: GTCCCTCAGCTGCAACAGTGTGCCTATGAGTGCCCAGAAGTCACTCCCCGCAGACGCTTCACTGAAGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS TCA 72 bp | TTCTTGCTGCCAGCAGGGCAATTAAAGTGGATTCGCTaGCAGTGCTCTGTAAGACACCTCCCCCTCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLLPAGQLKWIR*QCSVRHLPLGC Trigger: GCAGCCGAGGGGGAGGTGTCTTACAGAGCACTGTCAGCGAATCCACTTTAATTGCCCTGCTGGCAGCAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 72 bp | CTGGGATGTCACAGTGAAACGGATGATCAGCTTGTCTaGGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LGCHSETDDQLV*DSSRDEKELAS Trigger: GCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCGTTTCACTGTGACATCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | GTCCCTAACGTTGCACAGACAAACACAGGCACCAAGCCCTGTTGCTaGTCTTCCTCAATAGCTTTCTGGAGAGCTTCTCCTCGGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VPNVAQTNTGTKPCC*SSSIAFWRASPRSE Trigger: CTCACTCCGAGGAGAAGCTCTCCAGAAAGCTATTGAGGAAGACAAGCAACAGGGCTTGGTGCCTGTGTTTGTCTGTGCAACGTTAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS TCA 72 bp | GCGTTGTCTTCCTCCTGTTCTGGACGGACAAGTAACTaGACAGAAAGGACGACAGCTTGTGCTTGGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ALSSSCSGRTSN*TERTTACAWWC Trigger: ACACCACCAAGCACAAGCTGTCGTCCTTTCTGTTCAGTTACTTGTCCGTCCAGAACAGGAGGAAGACAACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 72 bp | TGGGATGTCACAGTGAAACGGATGATCAGCTTGTCTTaGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WDVTVKRMISLS*IVAGMRKSWPA Trigger: AGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCGTTTCACTGTGACATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | TCCTTGACCCAGAATCCAGTACAGTCAAAGTGTACCATCATCCACTaGGAAGGGTTAAAGGTGAAGGAGTCAGCGTACTCGATGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLTQNPVQSKCTIIH*EGLKVKESAYSMPS Trigger: GGAGGGCATCGAGTACGCTGACTCCTTCACCTTTAACCCTTCCAAGTGGATGATGGTACACTTTGACTGTACTGGATTCTGGGTCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | GGTGGTAAACTGGGATGTCACAGTGAAACGGATGATCAGCTTGTCTaGGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGCTTTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: GGKLGCHSETDDQLV*DSSRDEKELASFGY Trigger: ATAGCCAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCGTTTCACTGTGACATCCCAGTTTACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | TCCTTGGTGGTAAACTGGGATGTCACAGTGAAACGGATGATCAGCTaGTCTTGGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SLVVNWDVTVKRMIS*SWIVAGMRKSWPAL Trigger: CAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCGTTTCACTGTGACATCCCAGTTTACCACCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | TTAGCAGCCTCTTGGATGAGGTGCCAATCTCTCAGGATGTCCTCCTaGGTGGTAAACTGGGATGTCACAGTGAAACGGATGATCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LAASWMRCQSLRMSS*VVNWDVTVKRMISL Trigger: CAAGCTGATCATCCGTTTCACTGTGACATCCCAGTTTACCACCAAGGAGGACATCCTGAGAGATTGGCACCTCATCCAAGAGGCTGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 72 bp | TTAGGACCCTTCAGACGGAAAACCACCAAACCAAGGTaGCTCTTAGCAGGAATTTCGAAGGAAGGGTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LGPFRRKTTKPR*LLAGISKEGSL Trigger: AAGCGACCCTTCCTTCGAAATTCCTGCTAAGAGGCACCTTGGTTTGGTGGTTTTCCGTCTGAAGGGTCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 72 bp | TTTGAAGGCACCTTTCTTCATCATCATCATTTGTTCTaGGAACCCGGAAAAGATTCTGGCCCGGAAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: FEGTFLHHHHLF*EPGKDSGPEGA Trigger: GGCTCCTTCCGGGCCAGAATCTTTTCCGGGTTCCCAGAACAAATGATGATGATGAAGAAAGGTGCCTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 72 bp | GTAAACTGGGATGTCACAGTGAAACGGATGATCAGCTaGTCTTGGATAGTAGCCGGGATGAGAAAGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VNWDVTVKRMIS*SWIVAGMRKSW Trigger: CCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCTGATCATCCGTTTCACTGTGACATCCCAGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | AGCTTGTCTTGGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGCTTaGGCTATTTCCTTTAACACACTTTCTGTGAGACAATTAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: SLSWIVAGMRKSWPA*AISFNTLSVRQLGP Trigger: GGGTCCTAATTGTCTCACAGAAAGTGTGTTAAAGGAAATAGCCAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 72 bp | CAGAATCCAGTACAGTCAAAGTGTACCATCATCCACTaGGAAGGGTTAAAGGTGAAGGAGTCAGCGTACTCG | + |
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Preference number: 6 (lower is better) Translates to: QNPVQSKCTIIH*EGLKVKESAYS Trigger: CGAGTACGCTGACTCCTTCACCTTTAACCCTTCCAAGTGGATGATGGTACACTTTGACTGTACTGGATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 90 bp | TCTTCCTCAATAGCTTTCTGGAGAGCTTCTCCTCGGAGTGAGAAGTaGTCGTCCACAGGTAGAAATCTGATCTTCACAAGGGAAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSIAFWRASPRSEK*SSTGRNLIFTREIK Trigger: CTTGATTTCCCTTGTGAAGATCAGATTTCTACCTGTGGACGACAACTTCTCACTCCGAGGAGAAGCTCTCCAGAAAGCTATTGAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS TCA 72 bp | TATTTAGCCATTTCTGTGCCGTGTCTGACATGTGCTTaGAGATTCTTCACCCCGAAGGACCGAATCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: YLAISVPCLTCA*RFFTPKDRITN Trigger: GTTTGTGATTCGGTCCTTCGGGGTGAAGAATCTTCAAGCACATGTCAGACACGGCACAGAAATGGCTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS GCA 72 bp | AAAGTATTTAGCCATTTCTGTGCCGTGTCTGACATGTaGTTGAAGATTCTTCACCCCGAAGGACCGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: KVFSHFCAVSDM*LKILHPEGPNH Trigger: GTGATTCGGTCCTTCGGGGTGAAGAATCTTCAAGCACATGTCAGACACGGCACAGAAATGGCTAAATACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CCA 72 bp | AGCTTGTCTTGGATAGTAGCCGGGATGAGAAAGAGCTaGCCAGCTTTGGCTATTTCCTTTAACACACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLSWIVAGMRKS*PALAISFNTLS Trigger: AGAAAGTGTGTTAAAGGAAATAGCCAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCAAGACAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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| CDS CAA 72 bp | TGGATAGTAGCCGGGATGAGAAAGAGCTGGCCAGCTTaGGCTATTTCCTTTAACACACTTTCTGTGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: WIVAGMRKSWPA*AISFNTLSVRQ Trigger: TTGTCTCACAGAAAGTGTGTTAAAGGAAATAGCCAAAGCTGGCCAGCTCTTTCTCATCCCGGCTACTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028838.5 |
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