Pregenerated sensors for HAGHL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061046Ensembl transcript IDs: ENSMUST00000077938.10, ENSMUST00000133071.8, ENSMUST00000138759.8, ENSMUST00000140738.8, ENSMUST00000145053.2, ENSMUST00000150324.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATaGGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SGPTRAPTDPTYRAP*AVETRHHLLVLQSR Trigger: CCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCTTCTTCAAAGCAGGGTaGCAGGGGTCCCTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLSKFYSPSSVPRICLWTFFKAG*QGSLGE Trigger: CTCCCCCAGGGACCCCTGCCACCCTGCTTTGAAGAA...GGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGACCGCACTGACAGGATaGGGAAGAGAGCTGGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: PHRLLGEQIRPLLRSFPVTALTG*GRELAC Trigger: ACAAGCCAGCTCTCTTCCTCATCCTGTCAGTGCGGT...CACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| 3UTR-3UTR TCA 90 bp | TCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGGCTGTTGGCTAAAGTCACCGCACTaGCAGGATGAGGAAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SMFKKQETKGMKHPTGCWLKSPH*QDEEES Trigger: GCTCTCTTCCTCATCCTGTCAGTGCGGTGACTTTAG...CCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCATTCTTCAAAGCAGGGTaGCAGGGGTCCCTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HCVSGTTLGLSKFYSPSSFFKAG*QGSLGE Trigger: CTCCCCCAGGGACCCCTGCCACCCTGCTTTGAAGAA...TGAGGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTTCTTCAAAGCAGGGTaGCAGGGGTCCCTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: IHCVSGTTLGLSKFYSPSFFKAG*QGSLGE Trigger: CTCCCCCAGGGACCCCTGCCACCCTGCTTTGAAGAA...GGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACATTCTTCAAAGCAGGGTaGCAGGGGTCCCTGGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FQSFIHPPQSPGYVSGPTFFKAG*QGSLGE Trigger: CTCCCCCAGGGACCCCTGCCACCCTGCTTTGAAGAA...TGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTAGACAAGACACCACTTaGTGGTTCTTCAAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPQDMSLDPQELLQIPLRQDTT*WFFKAG Trigger: CCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCT...AAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCAGACAAGACACCACTTaGTGGTTCTTCAAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FYSPSSVPRICLWTHKSSRQDTT*WFFKAG Trigger: CCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCT...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCAGACAAGACACCACTTaGTGGTTCTTCAAAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DPLCVWYHTGPFKVLFTLRQDTT*WFFKAG Trigger: CCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCT...GAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAGACAAGACACCACTTaGTGGTTCTTCAAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSKFYSPSSVPRICLWTHRQDTT*WFFKAG Trigger: CCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCT...GTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| 3UTR-3UTR CAA 90 bp | GACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCAGGAAGAGAGCTGGCTaGTATAGTGCTGCAGCCGCA | + |
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Preference number: 3 (lower is better) Translates to: DQGHEAPHRLLGEQIRPLRKRAG*YSAAAA Trigger: TGCGGCTGCAGCACTATACAAGCCAGCTCTCTTCCT...GAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| 3UTR TCA 72 bp | ACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATaGGCAGTAGAGACAAGACACCACTTGCTGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: TRAPTDPTYRAP*AVETRHHLLVL Trigger: AAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | GACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCCTCCTGGGCTGCAGCTaGGTCACCCTCAGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DQGHEAPHRLLGEQIRPLLLGCS*VTLRKG Trigger: CCCTTTCCTGAGGGTGACGCAGCTGCAGCCCAGGAG...GAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR GCA 90 bp | AGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTGCAGTGTCCTCCAGGTaGCAGCCACAGCCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SSRDKTPLAGSSKQGGRGAVSSR*QPQPAT Trigger: AGTGGCAGGCTGTGGCTGGCACCTGGAGGACACTGC...ACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | TTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACGCAGTGTCCTCCAGGTaGCAGCCACAGCCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: FKKQETKGMKHPTGCWVNAVSSR*QPQPAT Trigger: AGTGGCAGGCTGTGGCTGGCACCTGGAGGACACTGC...GTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGGCAGTGTCCTCCAGGTaGCAGCCACAGCCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQAVSSR*QPQPAT Trigger: AGTGGCAGGCTGTGGCTGGCACCTGGAGGACACTGC...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | AGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTCCCGGGTGGACAGCACCATaGTCAGAGACACTCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SRDKTPLAGSSKQGGRGPGWTAP*SETLPR Trigger: GCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCC...GGGACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQARGVA*RQEASH Trigger: GTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGC...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCCTCCAGGACCTGGGCTaGGGCCACCTGGCCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FYSPSSVPRICLWTHKSSLQDLG*GHLACE Trigger: TTCACAGGCCAGGTGGCCCCAGCCCAGGTCCTGGAG...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCTCCAGGACCTGGGCTaGGGCCACCTGGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PGYVSGPTRAPTDPTYRALQDLG*GHLACE Trigger: TTCACAGGCCAGGTGGCCCCAGCCCAGGTCCTGGAG...AGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| 3UTR CAA 72 bp | AGTCACCGCACTGACAGGATGAGGAAGAGAGCTGGCTaGTATAGTGCTGCAGCCGCAAGCACTGGCATCGGC | + |
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Preference number: 4 (lower is better) Translates to: SHRTDRMRKRAG*YSAAAASTGIG Trigger: GCCGATGCCAGTGCTTGCGGCTGCAGCACTATACAAGCCAGCTCTCTTCCTCATCCTGTCAGTGCGGTGACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR TCA 90 bp | CTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTGGAAAGGGTTGTACATaGGCTCCTCGCCCAGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: LSPQDMSLDPQELLQIPLGKGCT*APRPAS Trigger: CGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCC...AAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | CAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATGCAGTGTCCTCCAGGTaGCAGCCACAGCCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: QSPGYVSGPTRAPTDPTYAVSSR*QPQPAT Trigger: AGTGGCAGGCTGTGGCTGGCACCTGGAGGACACTGC...ATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: PGYVSGPTRAPTDPTYRAARGVA*RQEASH Trigger: GTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGC...AGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTARGVA*RQEASH Trigger: GTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGC...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CCA 90 bp | GACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCATGTGGCCAGAGGTGTaGCCTGGCGTCAAGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: DQGHEAPHRLLGEQIRPLMWPEV*PGVKRH Trigger: ATGCCTCTTGACGCCAGGCCACACCTCTGGCCACAT...GAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGTCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: FTLLSPQDMSLDPQELLQSSSLS*AQDSLA Trigger: AGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGA...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCATCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLSPQDMSLDPQELLQIPSSSLS*AQDSLA Trigger: AGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGA...TGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATACTCCAGGACCTGGGCTaGGGCCACCTGGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GTTLGLSKFYSPSSVPRILQDLG*GHLACE Trigger: TTCACAGGCCAGGTGGCCCCAGCCCAGGTCCTGGAG...TATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| CDS-3UTR TCA 90 bp | GCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTCTGGATGGCCCCAAACTaGAGCCCTTCTCCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AVETRHHLLVLQSRVAGVWMAPN*SPSPCS Trigger: GGAACATGGAGAAGGGCTTCAGTTTGGGGCCATCCA...GACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR TCA 90 bp | ATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGGGAAAGGGTTGTACATaGGCTCCTCGCCCAGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: MSLDPQELLQIPLIGLHEGKGCT*APRPAS Trigger: CGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCC...CTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | GGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCGCAGTGTCCTCCAGGTaGCAGCCACAGCCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: GLSKFYSPSSVPRICLWTAVSSR*QPQPAT Trigger: AGTGGCAGGCTGTGGCTGGCACCTGGAGGACACTGC...GGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 |
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| CDS-3UTR GCA 90 bp | AGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTCCCCAGGACAGCTTAGCTTaGACGTGTTCGTTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SRDKTPLAGSSKQGGRGPQDSLA*TCSLQG Trigger: GCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTG...GGGACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGGGTGGACAGCACCATaGTCAGAGACACTCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTGWTAP*SETLPR Trigger: GCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCC...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSPQDMSLDPQELLQIPLGIARG*PQTEAL Trigger: AAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCC...AAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SFIHPPQSPGYVSGPTRAARGVA*RQEASH Trigger: GTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGC...AGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGGTCTTGGCCAAGCTCTaGTACATCTGCTGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FTLLSPQDMSLDPQELLQVLAKL*YICWAV Trigger: CACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGAC...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTCGTCTTGGCCAAGCTCTaGTACATCTGCTGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AVETRHHLLVLQSRVAGVVLAKL*YICWAV Trigger: CACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGAC...GACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGTCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQSSSLS*AQDSLA Trigger: AGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGA...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTCAGCGTATGCTCATaGCCACAGAACACCTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: LLSPQDMSLDPQELLQIPLSVCS*PQNTFV Trigger: GACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAG...TGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR TCA 90 bp | GACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCCTCAGCGTATGCTCATaGCCACAGAACACCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQGHEAPHRLLGEQIRPLLSVCS*PQNTFV Trigger: GACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAG...GAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGAAGCTCTGGTACATCTaGTGGGCAGTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQKLWYI*WAVSSR Trigger: CCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTT...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGTGTGAACGCACGGACTaGATCCTCTGTCACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQCERTD*ILCHPQ Trigger: CTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACA...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTTGTGAACGCACGGACTaGATCCTCTGTCACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRDKTPLAGSSKQGGRGCERTD*ILCHPQ Trigger: CTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACA...ACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACACTTAATCTCCTGGGCTaGAGCTGCGTCACCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTLNLLG*SCVTLR Trigger: CCTGAGGGTGACGCAGCTGCAGCCCAGGAGATTAAG...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGCCCAGTGATGATGGGTaGACAGCACCATGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQPSDDG*TAPWSE Trigger: CTCTGACCATGGTGCTGTCCACCCATCATCACTGGG...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSMSSRDKTPLAGSSKQGGIARG*PQTEAL Trigger: AAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCC...ACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTGIARG*PQTEAL Trigger: AAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCC...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKFYSPSSVPRICLWTHARGVA*RQEASH Trigger: GTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGC...GTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGATGTGGCCAGAGGTGTaGCCTGGCGTCAAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWYHTGPFKVLFTLLSPQMWPEV*PGVKRH Trigger: ATGCCTCTTGACGCCAGGCCACACCTCTGGCCACAT...CTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGATGTGGCCAGAGGTGTaGCCTGGCGTCAAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGYVSGPTRAPTDPTYRMWPEV*PGVKRH Trigger: ATGCCTCTTGACGCCAGGCCACACCTCTGGCCACAT...CCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTAATGTGGCCAGAGGTGTaGCCTGGCGTCAAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVPRICLWTHKSSYRSHLMWPEV*PGVKRH Trigger: ATGCCTCTTGACGCCAGGCCACACCTCTGGCCACAT...TAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLLSPQDMSLDPQELLQGYPES*PSSGTS Trigger: AGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCC...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGGCTCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSMFKKQETKGMKHPTGSSSLS*AQDSLA Trigger: AGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGA...GCCTGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CCA 90 bp | TTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACACTCCAGGACCTGGGCTaGGGCCACCTGGCCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQSFIHPPQSPGYVSGPTLQDLG*GHLACE Trigger: TTCACAGGCCAGGTGGCCCCAGCCCAGGTCCTGGAG...TGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTAACCTGCGGCTGTGGTaGCTCCACAGCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFIHPPQSPGYVSGPTRANLRLW*LHSRLE Trigger: TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTT...AGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCAACCTGCGGCTGTGGTaGCTCCACAGCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSKFYSPSSVPRICLWTNLRLW*LHSRLE Trigger: TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTT...GGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGTGGATGGCCCCAAACTaGAGCCCTTCTCCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWYHTGPFKVLFTLLSPQWMAPN*SPSPCS Trigger: GGAACATGGAGAAGGGCTTCAGTTTGGGGCCATCCA...CTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| CDS-3UTR TCA 90 bp | GATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCGGAAAGGGTTGTACATaGGCTCCTCGCCCAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DPLCVWYHTGPFKVLFTLGKGCT*APRPAS Trigger: CGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCC...GAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCAGGAAAGGGTTGTACATaGGCTCCTCGCCCAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PFKVLFTLLSPQDMSLDPGKGCT*APRPAS Trigger: CGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCC...TGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTAAGCTCTGGTACATCTaGTGGGCAGTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSMSSRDKTPLAGSSKQGKLWYI*WAVSSR Trigger: CCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTT...ACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGAAGCTCTGGTACATCTaGTGGGCAGTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDPQELLQIPLIGLHEKLWYI*WAVSSR Trigger: CCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTT...CTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCAAGCTCTGGTACATCTaGTGGGCAGTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYSPSSVPRICLWTHKSSKLWYI*WAVSSR Trigger: CCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTT...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCCAGGACAGCTTAGCTTaGACGTGTTCGTTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYSPSSVPRICLWTHKSSQDSLA*TCSLQG Trigger: GCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTG...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | CCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGCAGGACAGCTTAGCTTaGACGTGTTCGTTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHRLLGEQIRPLLRSFPVQDSLA*TCSLQG Trigger: GCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTG...CACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR GCA 90 bp | CCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCAGGACAGCTTAGCTTaGACGTGTTCGTTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGYVSGPTRAPTDPTYRAQDSLA*TCSLQG Trigger: GCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTG...AGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGTGTGAACGCACGGACTaGATCCTCTGTCACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSRDKTPLAGSSKQGGRCERTD*ILCHPQ Trigger: CTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACA...CCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | CCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCAGGGTGGACAGCACCATaGTCAGAGACACTCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PFKVLFTLLSPQDMSLDPGWTAP*SETLPR Trigger: GCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCC...TGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACACCCAGTGATGATGGGTaGACAGCACCATGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTPSDDG*TAPWSE Trigger: CTCTGACCATGGTGCTGTCCACCCATCATCACTGGG...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGCAAGACAGCCAATCCTaGCAGAATGTGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQQDSQS*QNVCQL Trigger: GAGCTGGCACACATTCTGCCAGGATTGGCTGTCTTG...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGTCTTGGCCAAGCTCTaGTACATCTGCTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTVLAKL*YICWAV Trigger: CACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGAC...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CCA 90 bp | TTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FKKQETKGMKHPTGCWVNGYPES*PSSGTS Trigger: AGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCC...GTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CCA 90 bp | CCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCAAACCTGCGGCTGTGGTaGCTCCACAGCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFKVLFTLLSPQDMSLDPNLRLW*LHSRLE Trigger: TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTT...TGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAGAGAACTTAATCTCCTaGGCTGCAGCTGCGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTENLIS*AAAASP Trigger: GGGTGACGCAGCTGCAGCCCAGGAGATTAAGTTCTC...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCTCAGCGTATGCTCATaGCCACAGAACACCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGYVSGPTRAPTDPTYRALSVCS*PQNTFV Trigger: GACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAG...AGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGCTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGATTGGAAAGGGTTGTACATaGGCTCCTCGCCCAGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HRLLGEQIRPLLRSFPVIGKGCT*APRPAS Trigger: CGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCC...AATCACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR GCA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTLLSPQDMSLDPQELLQGLHFL*KLKIAQ Trigger: CTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCC...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCTTGCACGTGTTCGTTaGAGGGCTCCACTTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSLDPQELLQIPLIGLHELARVR*RAPLSV Trigger: CACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAG...CTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTCTTGCACGTGTTCGTTaGAGGGCTCCACTTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSMSSRDKTPLAGSSKQGLARVR*RAPLSV Trigger: CACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAG...ACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACACTTGCACGTGTTCGTTaGAGGGCTCCACTTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLDSMFKKQETKGMKHPTLARVR*RAPLSV Trigger: CACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAG...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTACAAGACAGCCAATCCTaGCAGAATGTGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVPRICLWTHKSSYRSHLQDSQS*QNVCQL Trigger: GAGCTGGCACACATTCTGCCAGGATTGGCTGTCTTG...TAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTCAAGACAGCCAATCCTaGCAGAATGTGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSMSSRDKTPLAGSSKQGQDSQS*QNVCQL Trigger: GAGCTGGCACACATTCTGCCAGGATTGGCTGTCTTG...ACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGCAAGACAGCCAATCCTaGCAGAATGTGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHRLLGEQIRPLLRSFPVQDSQS*QNVCQL Trigger: GAGCTGGCACACATTCTGCCAGGATTGGCTGTCTTG...CACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCCAAGACAGCCAATCCTaGCAGAATGTGTGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYSPSSVPRICLWTHKSSQDSQS*QNVCQL Trigger: GAGCTGGCACACATTCTGCCAGGATTGGCTGTCTTG...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCAGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFKVLFTLLSPQDMSLDPGIARG*PQTEAL Trigger: AAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCC...TGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FYSPSSVPRICLWTHKSSGYPES*PSSGTS Trigger: AGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCC...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGYVSGPTRAPTDPTYRAGYPES*PSSGTS Trigger: AGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCC...AGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTAGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPRICLWTHKSSYRSHLGYPES*PSSGTS Trigger: AGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCC...TAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCATCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFKVLFTLLSPQDMSLDPSSSLS*AQDSLA Trigger: AGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGA...TGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAAACCTGCGGCTGTGGTaGCTCCACAGCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKVLFTLLSPQDMSLDPQNLRLW*LHSRLE Trigger: TTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTT...TTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR TCA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGGCGTGTGTTCCTCAATaGTCAGGTACATGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTLLSPQDMSLDPQELLQACVPQ*SGTCSC Trigger: ACAACTACATGTACCTGATCATTGAGGAACACACGC...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000150324.8 |
||
| CDS-3UTR TCA 90 bp | GAGACCAAGGGCATGAAGCACCCCACAGGCTGTTGGGTGAACAAATCAGACCTCGCGTGTGTTCCTCAATaGTCAGGTACATGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKGMKHPTGCWVNKSDLACVPQ*SGTCSC Trigger: ACAACTACATGTACCTGATCATTGAGGAACACACGC...GAGGTCTGATTTGTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKVLFTLLSPQDMSLDPQGIARG*PQTEAL Trigger: AAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCC...TTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACGTCTTGGCCAAGCTCTaGTACATCTGCTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKFYSPSSVPRICLWTHVLAKL*YICWAV Trigger: CACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGAC...GTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGCAGGCGTGTGTTCCTCAATaGTCAGGTACATGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLDPQELLQIPLIGLHEQACVPQ*SGTCSC Trigger: ACAACTACATGTACCTGATCATTGAGGAACACACGC...CTGCTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000150324.8 |
||
| CDS-3UTR TCA 90 bp | ATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCCTCAGCGTATGCTCATaGCCACAGAACACCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IHCVSGTTLGLSKFYSPSLSVCS*PQNTFV Trigger: GACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAG...GGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGATTCACTGGAAGCTCTGGTACATCTaGTGGGCAGTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGEQIRPLLRSFPVIHWKLWYI*WAVSSR Trigger: CCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTT...CCAGTGAATCACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYSPSSVPRICLWTHKSSGLHFL*KLKIAQ Trigger: CTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCC...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACATGTGAACGCACGGACTaGATCCTCTGTCACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQSFIHPPQSPGYVSGPTCERTD*ILCHPQ Trigger: CTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACA...TGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTAACTTTTTCTGGTGTGTaGTCAGAAGCCCCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVPRICLWTHKSSYRSHLTFSGV*SEAPTV Trigger: TACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGT...TAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCATGAGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTACTTTTTCTGGTGTGTaGTCAGAAGCCCCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSMSSRDKTPLAGSSKQGTFSGV*SEAPTV Trigger: TACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGT...ACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCTCATGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGTCTTGGCCAAGCTCTaGTACATCTGCTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKVLFTLLSPQDMSLDPQVLAKL*YICWAV Trigger: CACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGAC...TTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAACTCAGCGTATGCTCATaGCCACAGAACACCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKVLFTLLSPQDMSLDPQLSVCS*PQNTFV Trigger: GACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAG...TTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSKFYSPSSVPRICLWTGLHFL*KLKIAQ Trigger: CTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCC...GGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAACTTGCACGTGTTCGTTaGAGGGCTCCACTTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKVLFTLLSPQDMSLDPQLARVR*RAPLSV Trigger: CACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAG...TTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | CACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCAGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HCVSGTTLGLSKFYSPSSGLHFL*KLKIAQ Trigger: CTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCC...TGAGGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACACTTTTTCTGGTGTGTaGTCAGAAGCCCCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSKFYSPSSVPRICLWTHTFSGV*SEAPTV Trigger: TACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGT...GTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGATTCACTGGGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGEQIRPLLRSFPVIHWGLHFL*KLKIAQ Trigger: CTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCC...CCAGTGAATCACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCAACTTTTTCTGGTGTGTaGTCAGAAGCCCCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRIHCVSGTTLGLSKFYSTFSGV*SEAPTV Trigger: TACAGTGGGGGCTTCTGAGCACACACCAGAAAAAGT...TGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTGGATCCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
||
| CDS CCA 90 bp | GCCAGGAGTGCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTaGAAGCGCGCTCGCTCCCTGCAGAGGGCCTCCAGGACCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARSARTCGCGGSTAG*KRARSLQRASRTWA Trigger: AGCCCAGGTCCTGGAGGCCCTCTGCAGGGAGCGAGCGCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS GCA 90 bp | TCGGGTGGAAGGGTACCCAGAGTCTTGGCCAAGCTCTGGTACATCTaGTGGGCAGTGTCCTCCAGGTGCCAGCCACAGCCTGCCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGGRVPRVLAKLWYI*WAVSSRCQPQPATD Trigger: GTCAGTGGCAGGCTGTGGCTGGCACCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCTTCCACCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS GCA 90 bp | CTCCAGGACCTGGGCTGGGGCCACCTGGCCTGTGAACGCACGGACTaGATCCTCTGTCACCCTCAGGAAAGGGTTGTACATGAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQDLGWGHLACERTD*ILCHPQERVVHELL Trigger: GAGGAGCTCATGTACAACCCTTTCCTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACAGGCCAGGTGGCCCCAGCCCAGGTCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS CCA 90 bp | GTCATCCTCCCACAGGAAGTAGCTCATGTGGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCACGTGGATGGCCCCAAACTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VILPQEVAHVARGVA*RQEASHVDGPKLKP Trigger: GGGCTTCAGTTTGGGGCCATCCACGTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGCCACATGAGCTACTTCCTGTGGGAGGATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS CCA 90 bp | GTGCCAGCTCCGCATTTCCACGTGTGTGGTCCCAGTGATGATGGGTaGACAGCACCATGGTCAGAGACACTCCCTCGCGACCCGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VPAPHFHVCGPSDDG*TAPWSETLPRDPQS Trigger: AGATTGCGGGTCGCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCCATCATCACTGGGACCACACACGTGGAAATGCGGAGCTGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
||
| CDS CCA 90 bp | TGTGGCCAGAGGTGTGGCCTGGCGTCAAGAGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTTCTCCATGTTCCAGCCTTCGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CGQRCGLASRGIARG*PQTEALLHVPAFGL Trigger: TAACCCGAAGGCTGGAACATGGAGAAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS CCA 90 bp | GACCACAGAACACCTTCGTCTCGGGTGGAAGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCTGCTGGGCAGTGTCCTCCAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DHRTPSSRVEGYPES*PSSGTSAGQCPPGA Trigger: GGCACCTGGAGGACACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCTTCCACCCGAGACGAAGGTGTTCTGTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS CCA 90 bp | CCCAGCGTCGAAGGCACAGTAGGAATATCCTCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCTTGCACGTGTTCGTTGCAGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVEGTVGISSSSLS*AQDSLACTCSLQGS Trigger: GGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGAGGATATTCCTACTGTGCCTTCGACGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS TCA 90 bp | GTGTGGCCTGGCGTCAAGAGGCATCGCACGTGGATGGCCCCAAACTaGAGCCCTTCTCCATGTTCCAGCCTTCGGGTTAGAGCGCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VWPGVKRHRTWMAPN*SPSPCSSLRVRAQM Trigger: CATTTGCGCTCTAACCCGAAGGCTGGAACATGGAGAAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCCTCTTGACGCCAGGCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
||
| CDS CCA 90 bp | CATTTCCACGTGTGTGGTCCCAGTGATGATGGGTGGACAGCACCATaGTCAGAGACACTCCCTCGCGACCCGCAATCTCCAGCAACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HFHVCGPSDDGWTAP*SETLPRDPQSPATS Trigger: AGAGGTTGCTGGAGATTGCGGGTCGCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCCATCATCACTGGGACCACACACGTGGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSPQDMSLDPQELLQIPPGQLS*HVFVAG Trigger: CCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGG...TGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTCACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVETRHHLLVLQSRVAGVTLRKG*YMSSSP Trigger: GGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGT...GACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGAGGGTACCCAGAGTCTaGGCCAAGCTCTGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: FTLLSPQDMSLDPQELLQRVPRV*AKLWYI Trigger: GATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCT...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTCGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVETRHHLLVLQSRVAGVACTCS*QGSTFC Trigger: ACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGC...GACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FTLLSPQDMSLDPQELLQACTCS*QGSTFC Trigger: ACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGC...CTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS GCA 90 bp | GGAATATCCTCGTCATCCCTCTCCTGGGCCCAGGACAGCTTAGCTTaGACGTGTTCGTTGCAGGGCTCCACTTTCTGTGCAAACTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GISSSSLSWAQDSLA*TCSLQGSTFCANSR Trigger: TCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGAGGATATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS-3UTR CAA 90 bp | AGCAGTAGAGACAAGACACCACTTGCTGGTTCTTCAAAGCAGGGTGGCAGGGGTGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRDKTPLAGSSKQGGRGACTCS*QGSTFC Trigger: ACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGC...ACCCCTGCCACCCTGCTTTGAAGAACCAGCAAGTGGTGTCTTGTCTCTACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CAA 90 bp | CCCCACAGGCTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGCCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PHRLLGEQIRPLLRSFPVPGQLS*HVFVAG Trigger: CCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGG...CACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAGCCTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGCCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGYVSGPTRAPTDPTYRPGQLS*HVFVAG Trigger: CCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGG...CCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPGYVSGPTRAPTDPTYRTLRKG*YMSSSP Trigger: GGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGT...CCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FYSPSSVPRICLWTHKSSTLRKG*YMSSSP Trigger: GGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGT...GGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CAA 90 bp | CCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGYVSGPTRAPTDPTYRATLRKG*YMSSSP Trigger: GGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGT...AGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS TCA 90 bp | GGCTCCACTTTCTGTGCAAACTCAAGATTGCTCAGCGTATGCTCATaGCCACAGAACACCTTCGTCTCGGGTGGAAGGGTACCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSTFCANSRLLSVCS*PQNTFVSGGRVPRV Trigger: GACTCTGGGTACCCTTCCACCCGAGACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS GCA 90 bp | GCACGTGTTCGTTGCAGGGCTCCACTTTCTGTGCAAACTCAAGATTaGTCAGCGTATGCTCATGACCACAGAACACCTTCGTCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARVRCRAPLSVQTQD*SAYAHDHRTPSSRV Trigger: CACCCGAGACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTAAGGGTACCCAGAGTCTaGGCCAAGCTCTGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: SVPRICLWTHKSSYRSHLRVPRV*AKLWYI Trigger: GATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCT...TAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCAGGATATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGTACCCAGAGTCTaGGCCAAGCTCTGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: QSPGYVSGPTRAPTDPTYRVPRV*AKLWYI Trigger: GATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCT...ATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTAGACTCCATGTTTAAGAAGCAGGAGACCAAGGGCATGAAGCACCCCACAAGGGTACCCAGAGTCTaGGCCAAGCTCTGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: GLDSMFKKQETKGMKHPTRVPRV*AKLWYI Trigger: GATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCT...TGTGGGGTGCTTCATGCCCTTGGTCTCCTGCTTCTTAAACATGGAGTCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCTCTGGACCCACAAGAGCTCCTACAGATCCCACTTATAGGGCTCCATGAGGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSLDPQELLQIPLIGLHEACTCS*QGSTFC Trigger: ACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGC...CTCATGGAGCCCTATAAGTGGGATCTGTAGGAGCTCTTGTGGGTCCAGAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CAA 90 bp | GGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATACCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTTLGLSKFYSPSSVPRIPGQLS*HVFVAG Trigger: CCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGG...TATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| CDS GCA 90 bp | GGACAGCTTAGCTTGCACGTGTTCGTTGCAGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAGCGTATGCTCATGACCACAGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLSLHVFVAGLHFL*KLKIAQRMLMTTEH Trigger: GTGTTCTGTGGTCATGAGCATACGCTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS-3UTR CAA 90 bp | AGGATCCACTGTGTGTCTGGTACCACACTGGGCCTTTCAAAGTTTTATTCACCCAGGGTACCCAGAGTCTaGGCCAAGCTCTGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: RIHCVSGTTLGLSKFYSPRVPRV*AKLWYI Trigger: GATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCT...GGGTGAATAAAACTTTGAAAGGCCCAGTGTGGTACCAGACACACAGTGGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 |
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| CDS-3UTR CAA 90 bp | TTCAAAGTTTTATTCACCCTCCTCAGTCCCCAGGATATGTCTCTGGACCCACAACCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKVLFTLLSPQDMSLDPQPGQLS*HVFVAG Trigger: CCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGG...TTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGAATAAAACTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS-3UTR CAA 90 bp | CACAGGCTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGATTACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRLLGEQIRPLLRSFPVITLRKG*YMSSSP Trigger: GGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGT...AATCACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAGCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS-3UTR CAA 90 bp | CTGTTGGGTGAACAAATCAGACCTCTCTTGAGGTCATTTCCAGTGATTCACTGGGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGEQIRPLLRSFPVIHWACTCS*QGSTFC Trigger: ACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGC...CCAGTGAATCACTGGAAATGACCTCAAGAGAGGTCTGATTTGTTCACCCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS CCA 72 bp | GCCCGAACCTGCGGCTGTGGTGGCTCCACAGCAGGCTaGAAGCGCGCTCGCTCCCTGCAGAGGGCCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARTCGCGGSTAG*KRARSLQRASR Trigger: CCTGGAGGCCCTCTGCAGGGAGCGAGCGCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS TCA 72 bp | GGGCCTCCAGGACCTGGGCTGGGGCCACCTGGCCTGTaGACGCACGGACTGCATCCTCTGTCACCCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPPGPGLGPPGL*THGLHPLSPSG Trigger: TCCTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACAGGCCAGGTGGCCCCAGCCCAGGTCCTGGAGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS GCA 72 bp | AGAAGCCCCCACTGTAAGGCCAGGAGTGCCCGAACCTaGGGCTGTGGTGGCTCCACAGCAGGCTGGAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPHCKARSART*GCGGSTAGWKR Trigger: GCGCTTCCAGCCTGCTGTGGAGCCACCACAGCCGCAGGTTCGGGCACTCCTGGCCTTACAGTGGGGGCTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS CAA 72 bp | CTCCTGGGCTGCAGCTGCGTCACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCCAGCGTCGAAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LLGCSCVTLRKG*YMSSSPSVEGT Trigger: TGTGCCTTCGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGTGACGCAGCTGCAGCCCAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
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| CDS GCA 72 bp | CTGGGCTGGGGCCACCTGGCCTGTGAACGCACGGACTaGATCCTCTGTCACCCTCAGGAAAGGGTTGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: LGWGHLACERTD*ILCHPQERVVH Trigger: ATGTACAACCCTTTCCTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACAGGCCAGGTGGCCCCAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | AGGTGTGGCCTGGCGTCAAGAGGCATCGCACGTGGATaGCCCCAAACTGAAGCCCTTCTCCATGTTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RCGLASRGIARG*PQTEALLHVPA Trigger: GGCTGGAACATGGAGAAGGGCTTCAGTTTGGGGCCATCCACGTGCGATGCCTCTTGACGCCAGGCCACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | CCACAGGAAGTAGCTCATGTGGCCAGAGGTGTGGCCTaGCGTCAAGAGGCATCGCACGTGGATGGCCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PQEVAHVARGVA*RQEASHVDGPK Trigger: TTTGGGGCCATCCACGTGCGATGCCTCTTGACGCCAGGCCACACCTCTGGCCACATGAGCTACTTCCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | GTGTGTGGTCCCAGTGATGATGGGTGGACAGCACCATaGTCAGAGACACTCCCTCGCGACCCGCAATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VCGPSDDGWTAP*SETLPRDPQSP Trigger: TGGAGATTGCGGGTCGCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCCATCATCACTGGGACCACACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | CCGCATTTCCACGTGTGTGGTCCCAGTGATGATGGGTaGACAGCACCATGGTCAGAGACACTCCCTCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PHFHVCGPSDDG*TAPWSETLPRD Trigger: GTCGCGAGGGAGTGTCTCTGACCATGGTGCTGTCCACCCATCATCACTGGGACCACACACGTGGAAATGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
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| CDS CAA 72 bp | CTCGTCATCCCTCTCCTGGGCCCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGGCTCCACTTTCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVIPLLGPGQLS*HVFVAGLHFLC Trigger: GCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS CAA 72 bp | GCACGGACTGCATCCTCTGTCACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCCAGCGTCGAAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ARTASSVTLRKG*YMSSSPSVEGT Trigger: TGTGCCTTCGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGTGACAGAGGATGCAGTCCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS GCA 72 bp | TCGTCATCCCTCTCCTGGGCCCAGGACAGCTTAGCTTaGACGTGTTCGTTGCAGGGCTCCACTTTCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSLSWAQDSLA*TCSLQGSTFCA Trigger: TGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | ACACCTTCGTCTCGGGTGGAAGGGTACCCAGAGTCTTaGCCAAGCTCTGGTACATCTGCTGGGCAGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TPSSRVEGYPES*PSSGTSAGQCP Trigger: AGGACACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCTTCCACCCGAGACGAAGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS CAA 72 bp | AACACCTTCGTCTCGGGTGGAAGGGTACCCAGAGTCTaGGCCAAGCTCTGGTACATCTGCTGGGCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: NTFVSGGRVPRV*AKLWYICWAVS Trigger: GGACACTGCCCAGCAGATGTACCAGAGCTTGGCCAAGACTCTGGGTACCCTTCCACCCGAGACGAAGGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS CAA 90 bp | CCTGTGAACGCACGGACTGCATCCTCTGTCACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCCAGCGTCGAAGGCACAGTAGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: PVNARTASSVTLRKG*YMSSSPSVEGTVGI Trigger: TATTCCTACTGTGCCTTCGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGTGACAGAGGATGCAGTCCGTGCGTTCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000150324.8 |
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| CDS CAA 90 bp | GAACTTAATCTCCTGGGCTGCAGCTGCGTCACCCTCAGGAAAGGGTaGTACATGAGCTCCTCGCCCAGCGTCGAAGGCACAGTAGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: ELNLLGCSCVTLRKG*YMSSSPSVEGTVGI Trigger: TATTCCTACTGTGCCTTCGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCCTGAGGGTGACGCAGCTGCAGCCCAGGAGATTAAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140738.8 |
||
| CDS GCA 72 bp | CTTCTCCATGTTCCAGCCTTCGGGTTAGAGCGCAAATaGGCTCATCTGCTCCCAAGACAGCCAATCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLHVPAFGLERK*AHLLPRQPILA Trigger: TGCCAGGATTGGCTGTCTTGGGAGCAGATGAGCGCATTTGCGCTCTAACCCGAAGGCTGGAACATGGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000145053.2 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | CGTATGCTCATGACCACAGAACACCTTCGTCTCGGGTaGAAGGGTACCCAGAGTCTTGGCCAAGCTCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RMLMTTEHLRLG*KGTQSLGQALV Trigger: TACCAGAGCTTGGCCAAGACTCTGGGTACCCTTCCACCCGAGACGAAGGTGTTCTGTGGTCATGAGCATACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS CCA 72 bp | GAAGGCACAGTAGGAATATCCTCGTCATCCCTCTCCTaGGCCCAGGACAGCTTAGCTTGCACGTGTTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EGTVGISSSSLS*AQDSLACTCSL Trigger: CAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGAGGATATTCCTACTGTGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS CAA 90 bp | TCATCCCTCTCCTGGGCCCAGGACAGCTTAGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGTGCAAACTCAAGATTGCTCAGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSLSWAQDSLACTCS*QGSTFCANSRLLSV Trigger: TACGCTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS CAA 90 bp | AGGAATATCCTCGTCATCCCTCTCCTGGGCCCAGGACAGCTTAGCTaGCACGTGTTCGTTGCAGGGCTCCACTTTCTGTGCAAACTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RNILVIPLLGPGQLS*HVFVAGLHFLCKLK Trigger: CTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGAGAGGGATGACGAGGATATTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
||
| CDS CAA 72 bp | TCCTGGGCCCAGGACAGCTTAGCTTGCACGTGTTCGTaGCAGGGCTCCACTTTCTGTGCAAACTCAAGATTG | + |
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Preference number: 6 (lower is better) Translates to: SWAQDSLACTCS*QGSTFCANSRL Trigger: CAATCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCTAAGCTGTCCTGGGCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS GCA 72 bp | CGTTGCAGGGCTCCACTTTCTGTGCAAACTCAAGATTaGTCAGCGTATGCTCATGACCACAGAACACCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RCRAPLSVQTQD*SAYAHDHRTPS Trigger: CGAAGGTGTTCTGTGGTCATGAGCATACGCTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS GCA 72 bp | AGCTTGCACGTGTTCGTTGCAGGGCTCCACTTTCTGTaGAAACTCAAGATTGCTCAGCGTATGCTCATGACC | + |
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Preference number: 6 (lower is better) Translates to: SLHVFVAGLHFL*KLKIAQRMLMT Trigger: GGTCATGAGCATACGCTGAGCAATCTTGAGTTTGCACAGAAAGTGGAGCCCTGCAACGAACACGTGCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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| CDS TCA 72 bp | TTCTGTGCAAACTCAAGATTGCTCAGCGTATGCTCATaGCCACAGAACACCTTCGTCTCGGGTGGAAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: FCANSRLLSVCS*PQNTFVSGGRV Trigger: TACCCTTCCACCCGAGACGAAGGTGTTCTGTGGTCATGAGCATACGCTGAGCAATCTTGAGTTTGCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077938.10 ENSMUST00000133071.8 ENSMUST00000138759.8 ENSMUST00000140738.8 ENSMUST00000150324.8 |
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