Pregenerated sensors for H13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019188Ensembl transcript IDs: ENSMUST00000079247.4, ENSMUST00000089059.9, ENSMUST00000109825.8, ENSMUST00000125366.8
Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGCGGAGCTGCGCGAGCGACCAGCCCAGCTGGCGGCCCCCGCAGTaGGTAGGGAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: PRSCASDQPSWRPPQ*VGRAAQTRWSQALA Trigger: GGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCTGGGCTGGTCGCTCGCGCAGCTCCGCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | AGCTGGCGGCCCCCGCAGTGCGTAGGGAGGGCGGCCCAGACTCGCTaGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGGAGCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SWRPPQCVGRAAQTR*SQALARRYRLRSPG Trigger: ACCTGGGCTCCGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GTGAACAGCTTCCGGCCGCGGAGCTGCGCGAGCGACCAGCCCAGCTaGCGGCCCCCGCAGTGCGTAGGGAGGGCGGCCCAGACTCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VNSFRPRSCASDQPS*RPPQCVGRAAQTRW Trigger: CCAGCGAGTCTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCTGGGCTGGTCGCTCGCGCAGCTCCGCGGCCGGAAGCTGTTCAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGGAGCCCAGGTGTaGCCTTGGCGGGGGCGAGAGAGGTGGCGCTTTCCTTCCCGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GARRWPGATACGAQV*PWRGRERWRFPSRL Trigger: CAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCCAAGGCCACACCTGGGCTCCGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | AGGCGCTGGCCCGGCGCTACCGCCTGCGGAGCCCAGGTGTGGCCTTaGCGGGGGCGAGAGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RRWPGATACGAQVWP*RGRERWRFPSRLQG Trigger: GCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCCAAGGCCACACCTGGGCTCCGCAGGCGGTAGCGCCGGGCCAGCGCCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | ACCGCCTGCGGAGCCCAGGTGTGGCCTTGGCGGGGGCGAGAGAGGTaGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCG | + |
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Preference number: 1 (lower is better) Translates to: TACGAQVWPWRGRER*RFPSRLQGPSWRTP Trigger: CGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCCAAGGCCACACCTGGGCTCCGCAGGCGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | TGTGGCCTTGGCGGGGGCGAGAGAGGTGGCGCTTTCCTTCCCGCTTaGAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: CGLGGGERGGAFLPA*KALPGAPRRMPLLP Trigger: CGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCCAAGGCCACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GGGCGAGAGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTaGCGCACCCCGCAGGATGCCGCTCCTCCCGTGGCCGGCAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: GRERWRFPSRLQGPS*RTPQDAAPPVAGSH Trigger: GTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | CTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGATaGCGCTCCTCCCGTGGCCGGCAGTCACGCGGGGAGTCCATAGTT | + |
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Preference number: 1 (lower is better) Translates to: LSFPLARPFLAHPAG*RSSRGRQSRGESIV Trigger: AACTATGGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | TGCAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCGTaGCCGGCAGTCACGCGGGGAGTCCATAGTTGGAGAACAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: CKALPGAPRRMPLLP*PAVTRGVHSWRTGR Trigger: CCTTCCTGTTCTCCAACTATGGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | TGCAAGGTCTGTGGAACATCTGGCCCAGCCAGGACGGTCATTAGGTaGCAGGCGCCCGGCGCCACTGCCACCTCAGCCTCTGCTGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: CKVCGTSGPARTVIR*QAPGATATSASAGG Trigger: ACCCCCAGCAGAGGCTGAGGTGGCAGTGGCGCCGGGCGCCTGCCACCTAATGACCGTCCTGGCTGGGCCAGATGTTCCACAGACCTTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | CCATCCCGCCTCCCAGTATGCAGGCCTGATGCGCGCCCGGCCTGGTaGCATTTTTCCATGGGGCTCAGGCGGTGGCGGTTCACATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: PSRLPVCRPDARPAW*HFSMGLRRWRFTSG Trigger: TCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCCTGCATACTGGGAGGCGGGATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GGGCGCAGCAAGCACTCGCCCACCACCTTCACTGTCCCCCAGGAGTaGCTGGGAAAGGAGGCTCATGGGAACCCACTTCTGGCCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GRSKHSPTTFTVPQE*LGKEAHGNPLLAWH Trigger: GTGCCAGGCCAGAAGTGGGTTCCCATGAGCCTCCTTTCCCAGCCACTCCTGGGGGACAGTGAAGGTGGTGGGCGAGTGCTTGCTGCGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | CACCCATCCCGCCTCCCAGTATGCAGGCCTGATGCGCGCCCGGCCTaGTGCCATTTTTCCATGGGGCTCAGGCGGTGGCGGTTCACATCT | + |
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Preference number: 1 (lower is better) Translates to: HPSRLPVCRPDARPA*CHFSMGLRRWRFTS Trigger: AGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCCTGCATACTGGGAGGCGGGATGGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | CCACCGCCCAGGCTGGGCCCCGCTGCTGCCCGTGGTTTGCTCAGCTaGAGCTGGTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: PPPRLGPAAARGLLS*SWLIGTGVASVAAW Trigger: CCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAGCTGAGCAAACCACGGGCAGCAGCGGGGCCCAGCCTGGGCGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | GAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCGGCGCTaGAAGGTCTGTGGAACATCTGGCCCAGCCAGGACGGTCATTAGG | + |
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Preference number: 1 (lower is better) Translates to: EWPLWLLGQAGPDRR*KVCGTSGPARTVIR Trigger: CCTAATGACCGTCCTGGCTGGGCCAGATGTTCCACAGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GGGCCCCGCTGCTGCCCGTGGTTTGCTCAGCTGAAGCTGGTTAATTaGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GPRCCPWFAQLKLVN*NWSGLCGCLARQAL Trigger: CAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAGCTGAGCAAACCACGGGCAGCAGCGGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | GGGGTCGGCAGTGACTCAATGAGGCCTTTGTGGGCTGTGGGCTGTTaGGCCAACCACACTGTGTGCCTGGGCTGCCTGCCCCATCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GVGSDSMRPLWAVGC*ANHTVCLGCLPHLP Trigger: TGGCAGATGGGGCAGGCAGCCCAGGCACACAGTGTGGTTGGCTCAACAGCCCACAGCCCACAAAGGCCTCATTGAGTCACTGCCGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | ATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTaGTCGGCGCTGCAAGGTCTGTGGAACATCTGGCCCAGCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: IGTGVASVAAWPGRP*SALQGLWNIWPSQD Trigger: GTCCTGGCTGGGCCAGATGTTCCACAGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | CGCCACTGCCACCTCAGCCTCTGCTGGGGGTCGGCAGTGACTCAATaGGGCCTTTGTGGGCTGTGGGCTGTTGAGCCAACCACACTGTGT | + |
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Preference number: 1 (lower is better) Translates to: RHCHLSLCWGSAVTQ*GLCGLWAVEPTTLC Trigger: ACACAGTGTGGTTGGCTCAACAGCCCACAGCCCACAAAGGCCTCATTGAGTCACTGCCGACCCCCAGCAGAGGCTGAGGTGGCAGTGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | CGCTGCTGCCCGTGGTTTGCTCAGCTGAAGCTGGTTAATTGGAACTaGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCGGC | + |
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Preference number: 1 (lower is better) Translates to: RCCPWFAQLKLVNWN*SGLCGCLARQALIG Trigger: GCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAGCTGAGCAAACCACGGGCAGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GTGGCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATaGCACAGACCCTTGCTTTGCCCACCAGGACCGGGGCAGGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: VAGALSLSFCARAAG*HRPLLCPPGPGQES Trigger: GGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | CAGTATGCAGGCCTGATGCGCGCCCGGCCTGGTGCCATTTTTCCATaGGGCTCAGGCGGTGGCGGTTCACATCTGGAGTCTAGACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: QYAGLMRARPGAIFP*GSGGGGSHLESRLR Trigger: TCTGAGTCTAGACTCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCCTGCATACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | GCTCAGCTGAAGCTGGTTAATTGGAACTGGAGTGGCCTCTGTGGCTaGTTGGCCAGGCAGGCCCTGATCGGCGCTGCAAGGTCTGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: AQLKLVNWNWSGLCG*LARQALIGAARSVE Trigger: TTCCACAGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | CCCACTTCTGGCCTGGCACCCACGAAGGTACTCGCAAAGCCCCGATaGGTTCAGCACGAAACACTAGGCAGAGCTGCTGAGAGCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PTSGLAPTKVLAKPR*VQHETLGRAAESSL Trigger: AAGGGAGCTCTCAGCAGCTCTGCCTAGTGTTTCGTGCTGAACTCATCGGGGCTTTGCGAGTACCTTCGTGGGTGCCAGGCCAGAAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | TTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTTaGCCACCAGGACCGGGGCAGGAGTCCCATCTCCTGTGGCATCAT | + |
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Preference number: 1 (lower is better) Translates to: LSFCARAAGWHRPLL*PPGPGQESHLLWHH Trigger: ATGATGCCACAGGAGATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | CTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGTCCGATCTaGCCCTCAAGGGTCAGGCAGCGCTGCCTCATTTCTCCTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LLFCVAHRSSPACPI*PSRVRQRCLISPSS Trigger: AGAAGAAGGAGAAATGAGGCAGCGCTGCCTGACCCTTGAGGGCCAGATCGGACAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
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| 3UTR CCA 90 bp | CACCAGGACCGGGGCAGGAGTCCCATCTCCTGTGGCATCATCTCTTaGCACATCCACCCAGTCATTTCCGTCAGTCTCCCCAGAGGAATG | + |
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Preference number: 1 (lower is better) Translates to: HQDRGRSPISCGIIS*HIHPVISVSLPRGM Trigger: CATTCCTCTGGGGAGACTGACGGAAATGACTGGGTGGATGTGCCAAGAGATGATGCCACAGGAGATGGGACTCCTGCCCCGGTCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | TTTTTCCACCTGGGCAGGTGGACGAGGGATGAGCTGCCCTCTCCTTaGCCTTTAGGGACTCGCTTGAAGGTCAGGAGGGAGGGAGACTTT | + |
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Preference number: 1 (lower is better) Translates to: FFHLGRWTRDELPSP*PLGTRLKVRREGDF Trigger: AAAGTCTCCCTCCCTCCTGACCTTCAAGCGAGTCCCTAAAGGGCAAGGAGAGGGCAGCTCATCCCTCGTCCACCTGCCCAGGTGGAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | CATTCCACAGTCTCAGTTTTTCCACCTGGGCAGGTGGACGAGGGATaGGCTGCCCTCTCCTTGCCCTTTAGGGACTCGCTTGAAGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: HSTVSVFPPGQVDEG*AALSLPFRDSLEGQ Trigger: CTGACCTTCAAGCGAGTCCCTAAAGGGCAAGGAGAGGGCAGCTCATCCCTCGTCCACCTGCCCAGGTGGAAAAACTGAGACTGTGGAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | CTTGGCACATCCACCCAGTCATTTCCGTCAGTCTCCCCAGAGGAATaGCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCATTTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LGTSTQSFPSVSPEE*HLAGCQLRRATICA Trigger: AGCACAAATGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGACGGAAATGACTGGGTGGATGTGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | ACAAATGGAGACTGTAAAGCCAGCCGAAATTCCAAAGCTTGTCCTTaGGCTACAGTGACCCTGCCCTCCTGGGTGGGACCAACACGGACC | + |
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Preference number: 1 (lower is better) Translates to: TNGDCKASRNSKACP*ATVTLPSWVGPTRT Trigger: GGTCCGTGTTGGTCCCACCCAGGAGGGCAGGGTCACTGTAGCCCAAGGACAAGCTTTGGAATTTCGGCTGGCTTTACAGTCTCCATTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | ATCCACCCAGTCATTTCCGTCAGTCTCCCCAGAGGAATGCCATCTTaGAGGATGTCAGCTCCGGAGAGCCACCATTTGTGCTCCCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: IHPVISVSLPRGMPS*RMSAPESHHLCSLL Trigger: TAACAGGGAGCACAAATGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGACGGAAATGACTGGGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | AAACCAAGGCACAGAGAGGACACCACAAACCAGGGGAAATCTGTTTaGAAGCAGCTTCCGAAGAATCCACCCCCACTCCAGGGTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: KPRHREDTTNQGKSV*KQLPKNPPPLQGEP Trigger: AGGCTCACCCTGGAGTGGGGGTGGATTCTTCGGAAGCTGCTTTCAAACAGATTTCCCCTGGTTTGTGGTGTCCTCTCTGTGCCTTGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | CTAGGTAAGAACATCGAAGTGAAGGGTTTCGGGGATACAGCTCAGTaGTATAGCGCTCACTTAGCACGGTTCGGTCCCCTGGGACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LGKNIEVKGFGDTAQ*YSAHLARFGPLGLG Trigger: TCCCAGTCCCAGGGGACCGAACCGTGCTAAGTGAGCGCTATATCACTGAGCTGTATCCCCGAAACCCTTCACTTCGATGTTCTTACCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | CAGTACAAGCCTGCAGAGATCCAAGAAGGCCCTAAAGAGACCCCCTaGCTAGAGAGCCTTTCAGGCTTTCCTCTCCAGACTTTTAGACCC | + |
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Preference number: 1 (lower is better) Translates to: QYKPAEIQEGPKETP*LESLSGFPLQTFRP Trigger: GGGTCTAAAAGTCTGGAGAGGAAAGCCTGAAAGGCTCTCTAGGCAGGGGGTCTCTTTAGGGCCTTCTTGGATCTCTGCAGGCTTGTACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | CTGCTGAGAGCTCCCTTGGAGCACGGTGGCCTAGCGGCCATGGGATaGGTTTTTAATATGAGGCAAAGACAGTCCACAATACAAAAATCT | + |
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Preference number: 1 (lower is better) Translates to: LLRAPLEHGGLAAMG*VFNMRQRQSTIQKS Trigger: AGATTTTTGTATTGTGGACTGTCTTTGCCTCATATTAAAAACTCATCCCATGGCCGCTAGGCCACCGTGCTCCAAGGGAGCTCTCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR GCA 90 bp | CACTCACCTCCCTCCACTCTTATTCCCCAGGCTCTGGACAGCCTTTaGTCTCTGACCATTTCCAATCTGTTCATTTTAGTCATTAACCCT | + |
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Preference number: 1 (lower is better) Translates to: HSPPSTLIPQALDSL*SLTISNLFILVINP Trigger: AGGGTTAATGACTAAAATGAACAGATTGGAAATGGTCAGAGAGCAAAGGCTGTCCAGAGCCTGGGGAATAAGAGTGGAGGGAGGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CCA 90 bp | GAGAGCCACCATTTGTGCTCCCTGTTAGGTCCTTATCAACTTAGCTaGTGTCTGACACTGCATGGAAACAGAAAGACTTTCCAAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: ESHHLCSLLGPYQLS*CLTLHGNRKTFQRA Trigger: TGCCCTTTGGAAAGTCTTTCTGTTTCCATGCAGTGTCAGACACCAGCTAAGTTGATAAGGACCTAACAGGGAGCACAAATGGTGGCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR TCA 90 bp | TTAGTCCAAGGCATCGTTACTCTTGTCACCTTGTGTGCATCCGCATaGTGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTTACGT | + |
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Preference number: 1 (lower is better) Translates to: LVQGIVTLVTLCASA*CRTYLHSYLFQSLR Trigger: ACGTAAGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATGCACACAAGGTGACAAGAGTAACGATGCCTTGGACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| 3UTR TCA 90 bp | AGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATaGATTAGCTTCCACTTAGTCCAAGGCATCGTTACTCTTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: RKDWNTSHRLFISCV*ISFHLVQGIVTLVT Trigger: GGTGACAAGAGTAACGATGCCTTGGACTAAGTGGAAGCTAATTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGCAGGCAGCAGAGGCCTaGTCCCCATCCTGGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EGGPDSLEPGAGPALPPAQAAEA*SPSWGH Trigger: GTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTG...CGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGACCCCCACTCCAGGGTaGGCCTGGCACCAGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: EGGPDSLEPGAGPALPPATPTPG*AWHQSH Trigger: ATGGGACTGGTGCCAGGCTCACCCTGGAGTGGGGGT...CGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCGTCCCATCTGAGGCCCTaGCCAGCCACCCATCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: LPACKALPGAPRRMPLLPSHLRP*PATHPA Trigger: GGCGGGATGGGTGGCTGGGCAGGGCCTCAGATGGGA...CGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGCAAAGGGCAACTGGGTaGGAGGATGCTCTCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: EGGPDSLEPGAGPALPPAQRATG*EDALTS Trigger: AGAGGTGAGAGCATCCTCTCACCCAGTTGCCCTTTG...CGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCACCCCGCAGGATGCCGCTCCTCCCGTGGCCGGCAGTCACGCGGGGAGTCCAGGGTTTCCTTTGCCTaGAGGGATGAGGAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: AHPAGCRSSRGRQSRGESRVSFA*RDEEEQ Trigger: CTGCTCCTCCTCATCCCTGCAGGCAAAGGAAACCCT...GGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGAAGGCAGTACAAGCCTaGAGAGATCCAAGAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GRAAQTRWSQALARRYRLKAVQA*RDPRRP Trigger: GGGCCTTCTTGGATCTCTGCAGGCTTGTACTGCCTT...CAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCGCTTTGCCTGCAGGGATaGGGAGGAGCAGAGGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LPACKALPGAPRRMPLLPLCLQG*GGAEEA Trigger: GGCTTCCTCTGCTCCTCCTCATCCCTGCAGGCAAAG...CGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGAGTGGCCTCTGTGGCTaGTTGGCCAGGCAGGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGGAFLPACKALPGAPRRSGLCG*LARQAL Trigger: CAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACT...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCACCCCGCAGGATGCCGCTCCTCCCGTGGCCGGCAGTCACGCGGGGAGTCCGTGGCGGTTCACATCTaGAGTCTAGACTCAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: AHPAGCRSSRGRQSRGESVAVHI*SLDSEA Trigger: AGCCTCTGAGTCTAGACTCCAGATGTGAACCGCCAC...GGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCTAGCGGCCATGGGATaGGTTTTTAATATGAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GRAAQTRWSQALARRYRLLAAMG*VFNMRQ Trigger: TTGCCTCATATTAAAAACTCATCCCATGGCCGCTAG...CAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCGCCTGCTCCCCATCCTaGGGCCACCGTCGCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AGALSLSFCARAAGWHRPACSPS*GHRRLL Trigger: CAGGAGGCGACGGTGGCCCCAGGATGGGGAGCAGGC...GGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCGGGTGGCTGACTCGGTaGCCCAGCAGAGCAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: AGALSLSFCARAAGWHRPGWLTR*PSRAAT Trigger: TGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCC...GGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCGAACACTCTACAATGCTaGCCACATGCTAACCCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LPACKALPGAPRRMPLLPNTLQC*PHANPV Trigger: TACCGGGTTAGCATGTGGCCAGCATTGTAGAGTGTT...CGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCGCCAACCACACTGTGTaGCTGGGCTGCCTGCCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: AGALSLSFCARAAGWHRPANHTV*LGCLPH Trigger: ATGGGGCAGGCAGCCCAGGCACACAGTGTGGTTGGC...GGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGTTGGGTGGCTGACTCGGTGGCCCAGCAGAGCAGCCACAGTGACTTCTTCCCTTGGAGCACGGTaGCCTAGCGGCCATGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: REVGWLTRWPSRAATVTSSLGAR*PSGHGM Trigger: CATCCCATGGCCGCTAGGCCACCGTGCTCCAAGGGA...AGAAGTCACTGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCCAACTTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 90 bp | CTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTaGCTTTGCCCACCAGGACCGGGGCAGGAGTCCCATCTCCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSLSFCARAAGWHRP*LCPPGPGQESHLLW Trigger: CCACAGGAGATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCCTGTTCTCTGGAATCTaGTCCCTCCCCAGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VNWNWSGLCGCLARQALILFSGI*SLPRAG Trigger: GCCTGCCCTGGGGAGGGAGCAGATTCCAGAGAACAG...GATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAGATGTCAGGACACTGCCATCTCATCCTGGAAGCCATCCATTGTCATCCTCGGCGCCCGGCGCCACTaGCACCTCAGCCTCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: IRCQDTAISSWKPSIVILGARRH*HLSLCW Trigger: CCAGCAGAGGCTGAGGTGGCAGTGGCGCCGGGCGCC...GAGGATGACAATGGATGGCTTCCAGGATGAGATGGCAGTGTCCTGACATCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 90 bp | CAGCTGAAGCTGGTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTaGGCCAGGCAGGCCCTGATCGGCGCTGCAAGGTCTGTGGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: QLKLVNWNWSGLCGC*ARQALIGAARSVEH Trigger: ATGTTCCACAGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 90 bp | CCACCAGGACCGGGGCAGGAGTCCCATCTCCTGTGGCATCATCTCTaGGCACATCCACCCAGTCATTTCCGTCAGTCTCCCCAGAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PPGPGQESHLLWHHL*AHPPSHFRQSPQRN Trigger: ATTCCTCTGGGGAGACTGACGGAAATGACTGGGTGGATGTGCCAAGAGATGATGCCACAGGAGATGGGACTCCTGCCCCGGTCCTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 90 bp | TTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTaGCCCACCAGGACCGGGGCAGGAGTCCCATCTCCTGTGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: FVVLCKGSWMAQTLA*PTRTGAGVPSPVAS Trigger: TGATGCCACAGGAGATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | GTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCTCGGCAGTGACTCAATaGGGCCTTTGTGGGCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VNWNWSGLCGCLARQALISAVTQ*GLCGLW Trigger: CCACAGCCCACAAAGGCCTCATTGAGTCACTGCCGA...GATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTTGCCCACGCTGCCTGCCCCATCTaGCACCCTCAGAGGGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VCRFVQGQLDGTDPCFAHAACPI*HPQRGF Trigger: AAAGCCCCTCTGAGGGTGGCAGATGGGGCAGGCAGC...GTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTTGCCCACTGCCACCTCAGCCTCTaGTGGGGGTCGGCAGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: VCRFVQGQLDGTDPCFAHCHLSL*WGSAVT Trigger: AGTCACTGCCGACCCCCAGCAGAGGCTGAGGTGGCA...GTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCACATTCAGTGCCCACCTaGCTCCTGGGGAAGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QSPQRNAILQDVSSGEPPHSVPT*LLGKEA Trigger: TGCTTCCTTCCCCAGGAGCCAGGTGGGCACTGAATG...TGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTTGCCCACACTAGGCAGAGCTGCTaGGAGCTCCCTTGGAGCACG | + |
|
Preference number: 2 (lower is better) Translates to: VCRFVQGQLDGTDPCFAHTRQSC*ELPWST Trigger: CGTGCTCCAAGGGAGCTCTCAGCAGCTCTGCCTAGT...GTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCTTCAGTCTCGGCTGCTaGATCTTTAGGGTTGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCFSLGC*IFRVGL Trigger: GAGTCCAACCCTAAAGATCCAGCAGCCGAGACTGAA...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
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| 3UTR CAA 90 bp | TGGACGAGGGATGAGCTGCCCTCTCCTTGCCCTTTAGGGACTCGCTaGAAGGTCAGGAGGGAGGGAGACTTTGGCTTTGGGATCTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: WTRDELPSPCPLGTR*KVRREGDFGFGISN Trigger: GTTAGAGATCCCAAAGCCAAAGTCTCCCTCCCTCCTGACCTTCAAGCGAGTCCCTAAAGGGCAAGGAGAGGGCAGCTCATCCCTCGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAAGTTGGGTGGCTGACTCGGTGGCCCAGCAGAGCAGCCACAGTGACTTCCCAGGGCAGGCTTTCTaGAGACCTGAGCTGTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QRSWVADSVAQQSSHSDFPGQAF*RPELYF Trigger: AAAATACAGCTCAGGTCTTCAGAAAGCCTGCCCTGG...GAAGTCACTGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCCAACTTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCAAAAACCACATTCAGTaGCCACCTGGCTCCTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VNWNWSGLCGCLARQALIKNHIQ*PPGSWG Trigger: TCCCCAGGAGCCAGGTGGGCACTGAATGTGGTTTTT...GATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGTTGGGTGGCTGACTCGGTGGCCCAGCAGAGCAGCCACAGTGACTTCTCAGTGCTTAGTATGTTaGGCTGCAGTCACTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: REVGWLTRWPSRAATVTSQCLVC*AAVTVW Trigger: CCAGACAGTGACTGCAGCTCAACATACTAAGCACTG...AGAAGTCACTGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCCAACTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGGCTTTCTGAAGACCTGAGCTGTATTTTGGGAGACCTGGGGATGGAAAACCCACTTCTGGCCTaGCACCCACGAAGGTACTCG | + |
|
Preference number: 2 (lower is better) Translates to: QGRLSEDLSCILGDLGMENPLLA*HPRRYS Trigger: CGAGTACCTTCGTGGGTGCCAGGCCAGAAGTGGGTT...TTCCATCCCCAGGTCTCCCAAAATACAGCTCAGGTCTTCAGAAAGCCTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCATGCCTCTACAAGTGCTaGGATGGCAGGCATATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSPQRNAILQDVSSGEPPCLYKC*DGRHIP Trigger: TGGAATATGCCTGCCATCCCAGCACTTGTAGAGGCA...TGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCGCTCTGGACAGCCTTTaGTCTCTGACCATTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VNWNWSGLCGCLARQALIALDSL*SLTISN Trigger: ATTGGAAATGGTCAGAGAGCAAAGGCTGTCCAGAGC...GATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCGAGAGCCACCATTTGTaGTCCCTGTTAGGTCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: AGALSLSFCARAAGWHRPESHHL*SLLGPY Trigger: ATAAGGACCTAACAGGGAGCACAAATGGTGGCTCTC...GGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCAAAAGCTCACAGGTCATaGCCATTCCACAGTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QSPQRNAILQDVSSGEPPKAHRS*PFHSLS Trigger: ACTGAGACTGTGGAATGGCCATGACCTGTGAGCTTT...TGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCTTGCATCGACACACCTaGTCTACATCTGAAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SVSPEECHLAGCQLRRATLHRHT*STSETG Trigger: CCCAGTTTCAGATGTAGACCAGGTGTGTCGATGCAA...GGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATGTCAGGACACTGCCATCTCATCCTGGAAGCCATCCATTGTCATCCTCTCTGTTCCAGGACCACATaGCCTCCCCCTGAAGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QMSGHCHLILEAIHCHPLCSRTT*PPPEGS Trigger: ACTGCCTTCAGGGGGAGGCCATGTGGTCCTGGAACA...GAGAGGATGACAATGGATGGCTTCCAGGATGAGATGGCAGTGTCCTGACATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCCTGAAGCTGGTTAATTaGAACTGGAGTGGCCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AGALSLSFCARAAGWHRPLKLVN*NWSGLC Trigger: ACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAG...GGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGATGTCAGGACACTGCCATCTCATCCTGGAAGCCATCCATTGTCATCCTCGGTGCCATTTTTCCATaGGGCTCAGGCGGTGGCGGT | + |
|
Preference number: 2 (lower is better) Translates to: IRCQDTAISSWKPSIVILGAIFP*GSGGGG Trigger: ACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACC...GAGGATGACAATGGATGGCTTCCAGGATGAGATGGCAGTGTCCTGACATCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCAGCCAAGGGGGACTTTaGATTGATCATCCTGTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: SVSPEECHLAGCQLRRATSQGGL*IDHPVL Trigger: TAAGACAGGATGATCAATTCAAAGTCCCCCTTGGCT...GGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCACAGAGAGGACACCACAAACCAGGGGAAATCTGTTTGAAAGCAGCTTCCGAGCTGCCCTCTCCTTaGCCTTTAGGGACTCGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KAQRGHHKPGEICLKAASELPSP*PLGTRL Trigger: CAAGCGAGTCCCTAAAGGGCAAGGAGAGGGCAGCTC...GGAAGCTGCTTTCAAACAGATTTCCCCTGGTTTGTGGTGTCCTCTCTGTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 90 bp | TTCTTCTCTAGCCTCTTCGATGCCGACGCCTCTGTTGACTCCTCTTaGGATTCAGTCTCGGCTGCTGGATCTTTAGGGTTGGACTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FFSSLFDADASVDSS*DSVSAAGSLGLDSS Trigger: TGAGGAGTCCAACCCTAAAGATCCAGCAGCCGAGACTGAATCCAAAGAGGAGTCAACAGAGGCGTCGGCATCGAAGAGGCTAGAGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCTTGGAGACTCTTCCATATCTTTTACGGAGGATATTCTAGGTGTCCATGATGCGCGCCCGGCCTaGTGCCATTTTTCCATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PHLGDSSISFTEDILGVHDARPA*CHFSMG Trigger: CCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATC...ATGGACACCTAGAATATCCTCCGTAAAAGATATGGAAGAGTCTCCAAGATGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 90 bp | GACCTTCGCATGCATTCATTTAACACACACAGTGCCGGCATGATTTaGCACTGGGCCAGGTGTTGGGGGTGGGGTACAATTCCCTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: DLRMHSFNTHSAGMI*HWARCWGWGTIPSF Trigger: AAATGAGGGAATTGTACCCCACCCCCAACACCTGGCCCAGTGCAAAATCATGCCGGCACTGTGTGTGTTAAATGAATGCATGCGAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGCTGTCCCCAAAGACAAGAAACAGGAATTCAGCACAGTGGTGAACATGAGACTGTCCCCCAGGAGTaGCTGGGAAAGGAGGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LCCPQRQETGIQHSGEHETVPQE*LGKEAH Trigger: ATGAGCCTCCTTTCCCAGCCACTCCTGGGGGACAGT...CTCATGTTCACCACTGTGCTGAATTCCTGTTTCTTGTCTTTGGGGACAGCATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCGAAGATGATGGTAGGTaGCATATAGGATTGTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: SVSPEECHLAGCQLRRATEDDGR*HIGLLQ Trigger: TTGTAACAATCCTATATGGCACCTACCATCATCTTC...GGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTTGCCCACGTGTCTGACACTGCATaGAAACAGAAAGACTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VCRFVQGQLDGTDPCFAHVSDTA*KQKDFP Trigger: TGGAAAGTCTTTCTGTTTCCATGCAGTGTCAGACAC...GTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATGCTGTCCCCAAAGACAAGAAACAGGAATTCAGCACAGTGGTGAACATGAGCTTAGTATGTTGAGCTaGAGTCACTGTCTGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LCCPQRQETGIQHSGEHELSMLS*SHCLGV Trigger: CACCCCCAGACAGTGACTGCAGCTCAACATACTAAG...CTCATGTTCACCACTGTGCTGAATTCCTGTTTCTTGTCTTTGGGGACAGCATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCATCTTGGAGACTCTTCCATATCTTTTACGGAGGATATTCTAGGTGTCCATCTGGTTAATTGGAACTaGAGTGGCCTCTGTGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PHLGDSSISFTEDILGVHLVNWN*SGLCGC Trigger: GCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAG...ATGGACACCTAGAATATCCTCCGTAAAAGATATGGAAGAGTCTCCAAGATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTCCTTATCTGTGAAGATGATGGTAGGTGCCATATAGGATTGTTACAATTACCCCGCTGCTGCCCGTaGTTTGCTCAGCTGAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PFLICEDDGRCHIGLLQLPRCCP*FAQLKL Trigger: CAGCTTCAGCTGAGCAAACCACGGGCAGCAGCGGGG...TAATTGTAACAATCCTATATGGCACCTACCATCATCTTCACAGATAAGGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR TCA 90 bp | CTATGCTGTCCCCAAAGACAAGAAACAGGAATTCAGCACAGTGGTGAACATGAGCGTGGTTTGCTCAGCTaGAGCTGGTTAATTGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: LCCPQRQETGIQHSGEHERGLLS*SWLIGT Trigger: AGTTCCAATTAACCAGCTTCAGCTGAGCAAACCACG...CTCATGTTCACCACTGTGCTGAATTCCTGTTTCTTGTCTTTGGGGACAGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAAAGCCAGGCACTGTGCTaGTTGCTTCCTACTTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: QPGKTGIHPTGYSFHVYESQALC*LLPTYC Trigger: ACAGTAAGTAGGAAGCAATCAGCACAGTGCCTGGCT...TTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCATCTTGGAGACTCTTCCATATCTTTTACGGAGGATATTCTAGGTGTCCATCAGGGGAAATCTGTTTaGAAGCAGCTTCCGAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PHLGDSSISFTEDILGVHQGKSV*KQLPKN Trigger: ATTCTTCGGAAGCTGCTTTCAAACAGATTTCCCCTG...ATGGACACCTAGAATATCCTCCGTAAAAGATATGGAAGAGTCTCCAAGATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATTCCTTATCTGTGAAGATGATGGTAGGTGCCATATAGGATTGTTACAATTAGAGTATGGGGTTTCTTaGAGGGATGGTCTTAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PFLICEDDGRCHIGLLQLEYGVS*RDGLKP Trigger: GGGCTTAAGACCATCCCTGCAAGAAACCCCATACTC...TAATTGTAACAATCCTATATGGCACCTACCATCATCTTCACAGATAAGGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTCCTTATCTGTGAAGATGATGGTAGGTGCCATATAGGATTGTTACAATTAGTATTTTGGGAGACCTaGGGATGGAAAAGATGGACC | + |
|
Preference number: 2 (lower is better) Translates to: PFLICEDDGRCHIGLLQLVFWET*GWKRWT Trigger: GGTCCATCTTTTCCATCCCCAGGTCTCCCAAAATAC...TAATTGTAACAATCCTATATGGCACCTACCATCATCTTCACAGATAAGGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | TTCCGGCCGCGGAGCTGCGCGAGCGACCAGCCCAGCTaGCGGCCCCCGCAGTGCGTAGGGAGGGCGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FRPRSCASDQPS*RPPQCVGRAAQ Trigger: CTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCTGGGCTGGTCGCTCGCGCAGCTCCGCGGCCGGAA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | TGCGCGAGCGACCAGCCCAGCTGGCGGCCCCCGCAGTaGGTAGGGAGGGCGGCCCAGACTCGCTGGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CASDQPSWRPPQ*VGRAAQTRWSQ Trigger: CTGGCTCCAGCGAGTCTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCTGGGCTGGTCGCTCGCGCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | CGCTGGCCCGGCGCTACCGCCTGCGGAGCCCAGGTGTaGCCTTGGCGGGGGCGAGAGAGGTGGCGCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RWPGATACGAQV*PWRGRERWRFP Trigger: AGGAAAGCGCCACCTCTCTCGCCCCCGCCAAGGCCACACCTGGGCTCCGCAGGCGGTAGCGCCGGGCCAGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGCTTTCCTTCCCGCTaGCAAGGCCCTTCCTGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: GRAAQTRWSQALARRYRLRFPSR*QGPSWR Trigger: GCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCG...CAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGGTGGGCTGTGGGCTGTaGAGCCAACCACACTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: EGGPDSLEPGAGPALPPAVGCGL*SQPHCV Trigger: CACACAGTGTGGTTGGCTCAACAGCCCACAGCCCAC...CGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | GGCCGGGCCGGGCCCACCGCCCAGGCTGGGCCCCGCTaGTGCCCGTGGTTTGCTCAGCTGAAGCTGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GRAGPTAQAGPR*CPWFAQLKLVN Trigger: ATTAACCAGCTTCAGCTGAGCAAACCACGGGCAGCAGCGGGGCCCAGCCTGGGCGGTGGGCCCGGCCCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | GGCGGGGGCGAGAGAGGTGGCGCTTTCCTTCCCGCTTaGAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GGGERGGAFLPA*KALPGAPRRMP Trigger: CGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCACCCCGCAGGATGCCGCTCCTCCCGTGGCCGGCAGTCACGCGGGGAGTCCACCCTCAGAGGGGCTTaGTTCCAGGACCACATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AHPAGCRSSRGRQSRGESTLRGA*FQDHMA Trigger: GGCCATGTGGTCCTGGAACAAAGCCCCTCTGAGGGT...GGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | AGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTaGCGCACCCCGCAGGATGCCGCTCCTCCCGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RWRFPSRLQGPS*RTPQDAAPPVA Trigger: GGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | CGCCTCCCAGTATGCAGGCCTGATGCGCGCCCGGCCTaGTGCCATTTTTCCATGGGGCTCAGGCGGTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: RLPVCRPDARPA*CHFSMGLRRWR Trigger: CCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCCTGCATACTGGGAGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | CTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCGTaGCCGGCAGTCACGCGGGGAGTCCATAGTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPGAPRRMPLLP*PAVTRGVHSWR Trigger: TCTCCAACTATGGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | GGAGCCCAGGTGTGGCCTTGGCGGGGGCGAGAGAGGTaGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAQVWPWRGRER*RFPSRLQGPSW Trigger: CCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCCAAGGCCACACCTGGGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGGCACAGACCCTTGCTTaGCCCACCAGGACCGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGGAFLPACKALPGAPRRAQTLA*PTRTGA Trigger: TGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGC...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | GCCCAGCCACCCATCCCGCCTCCCAGTATGCAGGCCTaGTGCGCGCCCGGCCTGGTGCCATTTTTCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: AQPPIPPPSMQA*CAPGLVPFFHG Trigger: CCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCCTGCATACTGGGAGGCGGGATGGGTGGCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCCAGGGGAAATCTGTTaGAAAGCAGCTTCCGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GRAAQTRWSQALARRYRLPGEIC*KAASEE Trigger: TTCTTCGGAAGCTGCTTTCAAACAGATTTCCCCTGG...CAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | GGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTaGTCGGCGCTGCAAGGTCTGTGGAACATCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GVASVAAWPGRP*SALQGLWNIWP Trigger: GGGCCAGATGTTCCACAGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CTGTGGCTGCTTGGCCAGGCAGGCCCTGATCGGCGCTaGAAGGTCTGTGGAACATCTGGCCCAGCCAGGACG | + |
|
Preference number: 3 (lower is better) Translates to: LWLLGQAGPDRR*KVCGTSGPART Trigger: CGTCCTGGCTGGGCCAGATGTTCCACAGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CTCCCAGTATGCAGGCCTGATGCGCGCCCGGCCTGGTaGCATTTTTCCATGGGGCTCAGGCGGTGGCGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPVCRPDARPAW*HFSMGLRRWRF Trigger: GAACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCCTGCATACTGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | TGTGGAACATCTGGCCCAGCCAGGACGGTCATTAGGTaGCAGGCGCCCGGCGCCACTGCCACCTCAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CGTSGPARTVIR*QAPGATATSAS Trigger: AGAGGCTGAGGTGGCAGTGGCGCCGGGCGCCTGCCACCTAATGACCGTCCTGGCTGGGCCAGATGTTCCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | GGCCTGATGCGCGCCCGGCCTGGTGCCATTTTTCCATaGGGCTCAGGCGGTGGCGGTTCACATCTGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLMRARPGAIFP*GSGGGGSHLES Trigger: AGACTCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCAGGCCGGGCGCGCATCAGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGCCTTTAGGGACTCGCTaGAAGGTCAGGAGGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RGGAFLPACKALPGAPRRPLGTR*KVRREG Trigger: TCCCTCCCTCCTGACCTTCAAGCGAGTCCCTAAAGG...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGCCTGGAAGCCATCCATaGTCATCCTCTCCCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RGGAFLPACKALPGAPRRPGSHP*SSSPCP Trigger: GGGACAGGGAGAGGATGACAATGGATGGCTTCCAGG...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | TGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTTaGCCACCAGGACCGGGGCAGGAGTCCCATCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CARAAGWHRPLL*PPGPGQESHLL Trigger: CAGGAGATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCGGCCTCTGTGGCTGCTaGGCCAGGCAGGCCCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: AGALSLSFCARAAGWHRPGLCGC*ARQALI Trigger: GATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCC...GGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGCTGTGGCATCATCTCTaGGCACATCCACCCAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RGGAFLPACKALPGAPRRLWHHL*AHPPSH Trigger: ATGACTGGGTGGATGTGCCAAGAGATGATGCCACAG...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CTGGGCAGGTGGACGAGGGATGAGCTGCCCTCTCCTTaGCCTTTAGGGACTCGCTTGAAGGTCAGGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGRWTRDELPSP*PLGTRLKVRRE Trigger: CTCCCTCCTGACCTTCAAGCGAGTCCCTAAAGGGCAAGGAGAGGGCAGCTCATCCCTCGTCCACCTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTTaGTTTGCCCACCAGGACCGGGGCAGGAGTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RFVQGQLDGTDP*FAHQDRGRSPI Trigger: GATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | CACTGTCCCCCAGGAGTGGCTGGGAAAGGAGGCTCATaGGAACCCACTTCTGGCCTGGCACCCACGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HCPPGVAGKGGS*EPTSGLAPTKV Trigger: TACCTTCGTGGGTGCCAGGCCAGAAGTGGGTTCCCATGAGCCTCCTTTCCCAGCCACTCCTGGGGGACAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | AGGCTGGGCCCCGCTGCTGCCCGTGGTTTGCTCAGCTaGAGCTGGTTAATTGGAACTGGAGTGGCCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLGPAAARGLLS*SWLIGTGVASV Trigger: CACAGAGGCCACTCCAGTTCCAATTAACCAGCTTCAGCTGAGCAAACCACGGGCAGCAGCGGGGCCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | AAGCTGGTTAATTGGAACTGGAGTGGCCTCTGTGGCTaGTTGGCCAGGCAGGCCCTGATCGGCGCTGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLVNWNWSGLCG*LARQALIGAAR Trigger: CCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | AAGCACTCGCCCACCACCTTCACTGTCCCCCAGGAGTaGCTGGGAAAGGAGGCTCATGGGAACCCACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KHSPTTFTVPQE*LGKEAHGNPLL Trigger: CAGAAGTGGGTTCCCATGAGCCTCCTTTCCCAGCCACTCCTGGGGGACAGTGAAGGTGGTGGGCGAGTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | CTGCCACCCTCAGAGGGGCTTTGTTCCAGGACCACATaGCCTCCCCCTGAAGGCAGTACAAGCCTGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPPSEGLCSRTT*PPPEGSTSLQR Trigger: TCTCTGCAGGCTTGTACTGCCTTCAGGGGGAGGCCATGTGGTCCTGGAACAAAGCCCCTCTGAGGGTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | GGCCTGGCACCCACGAAGGTACTCGCAAAGCCCCGATaGGTTCAGCACGAAACACTAGGCAGAGCTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLAPTKVLAKPR*VQHETLGRAAE Trigger: CTCAGCAGCTCTGCCTAGTGTTTCGTGCTGAACTCATCGGGGCTTTGCGAGTACCTTCGTGGGTGCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | CCAGCCGAAATTCCAAAGCTTGTCCTTGGGCTACAGTaGCCCTGCCCTCCTGGGTGGGACCAACACGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: PAEIPKLVLGLQ*PCPPGWDQHGP Trigger: TGGTCCGTGTTGGTCCCACCCAGGAGGGCAGGGTCACTGTAGCCCAAGGACAAGCTTTGGAATTTCGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | CGGGGCAGGAGTCCCATCTCCTGTGGCATCATCTCTTaGCACATCCACCCAGTCATTTCCGTCAGTCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RGRSPISCGIIS*HIHPVISVSLP Trigger: GGGGAGACTGACGGAAATGACTGGGTGGATGTGCCAAGAGATGATGCCACAGGAGATGGGACTCCTGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | TGCCCACCAGGACCGGGGCAGGAGTCCCATCTCCTGTaGCATCATCTCTTGGCACATCCACCCAGTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: CPPGPGQESHLL*HHLLAHPPSHF Trigger: GAAATGACTGGGTGGATGTGCCAAGAGATGATGCCACAGGAGATGGGACTCCTGCCCCGGTCCTGGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | GCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTGGATaGCACAGACCCTTGCTTTGCCCACCAGGACCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALSLSFCARAAG*HRPLLCPPGPG Trigger: CCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | TCCACCCAGTCATTTCCGTCAGTCTCCCCAGAGGAATaGCATCTTGCAGGATGTCAGCTCCGGAGAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: STQSFPSVSPEE*HLAGCQLRRAT Trigger: GGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGACGGAAATGACTGGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | TGGGGTGGTGGCGGGAGCACTGAGTTTGTCGTTTTGTaGAAGGGCAGCTGGATGGCACAGACCCTTGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WGGGGSTEFVVL*KGSWMAQTLAL Trigger: CAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGCCACCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | GGGAGCACTGAGTTTGTCGTTTTGTGCAAGGGCAGCTaGATGGCACAGACCCTTGCTTTGCCCACCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: GSTEFVVLCKGS*MAQTLALPTRT Trigger: GGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | TTTCCTCTCCAGACTTTTAGACCCAGAGAAGTTGGGTaGCTGACTCGGTGGCCCAGCAGAGCAGCCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPLQTFRPREVG*LTRWPSRAATV Trigger: CACTGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCCAACTTCTCTGGGTCTAAAAGTCTGGAGAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CCA 72 bp | GACTGTAAAGCCAGCCGAAATTCCAAAGCTTGTCCTTaGGCTACAGTGACCCTGCCCTCCTGGGTGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: DCKASRNSKACP*ATVTLPSWVGP Trigger: TGGTCCCACCCAGGAGGGCAGGGTCACTGTAGCCCAAGGACAAGCTTTGGAATTTCGGCTGGCTTTACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTTCCATGGGGCTCAGGCGGTGGCGGTTCACATCTGGAGTCTAGACTCAGAAGCAGAGGGTTTCCTTaGCCTGCAGGGATGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IFPWGSGGGGSHLESRLRSRGFP*PAGMRR Trigger: CCTCCTCATCCCTGCAGGCAAAGGAAACCCTCTGCT...TCTGAGTCTAGACTCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | AGGGAGCCGTCTGTCCATAGTTACAAGTCCCTTTGCTaGAGCGGGGTGCCCCGTGACACTCTCTTCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: REPSVHSYKSLC*SGVPRDTLFIS Trigger: TGAGATGAAGAGAGTGTCACGGGGCACCCCGCTTCAGCAAAGGGACTTGTAACTATGGACAGACGGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CCTGCAGAGATCCAAGAAGGCCCTAAAGAGACCCCCTaGCTAGAGAGCCTTTCAGGCTTTCCTCTCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: PAEIQEGPKETP*LESLSGFPLQT Trigger: AGTCTGGAGAGGAAAGCCTGAAAGGCTCTCTAGGCAGGGGGTCTCTTTAGGGCCTTCTTGGATCTCTGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | GTCATTTCCGTCAGTCTCCCCAGAGGAATGCCATCTTaGAGGATGTCAGCTCCGGAGAGCCACCATTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VISVSLPRGMPS*RMSAPESHHLC Trigger: GCACAAATGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTGACGGAAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCACAGTCTCAGTTTTTCCACCTGGGCAGGTGGACGAGGGATGAGCTGCCCGGAAAAGATGGACCTTaGATTTCCAGCCAGATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IPQSQFFHLGRWTRDELPGKDGP*ISSQMD Trigger: GTCCATCTGGCTGGAAATCAAAGGTCCATCTTTTCC...GGGCAGCTCATCCCTCGTCCACCTGCCCAGGTGGAAAAACTGAGACTGTGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | CACAGAGAGGACACCACAAACCAGGGGAAATCTGTTTaGAAGCAGCTTCCGAAGAATCCACCCCCACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HREDTTNQGKSV*KQLPKNPPPLQ Trigger: CTGGAGTGGGGGTGGATTCTTCGGAAGCTGCTTTCAAACAGATTTCCCCTGGTTTGTGGTGTCCTCTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | AACATCGAAGTGAAGGGTTTCGGGGATACAGCTCAGTaGTATAGCGCTCACTTAGCACGGTTCGGTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NIEVKGFGDTAQ*YSAHLARFGPL Trigger: CAGGGGACCGAACCGTGCTAAGTGAGCGCTATATCACTGAGCTGTATCCCCGAAACCCTTCACTTCGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCATCTTGGAGACTCTTCCATATCTTTTACGGAGGATATTCTAGGTGTCCATGGATGGCACAGACCCTaGCTTTGCCCACCAGGACCG | + |
|
Preference number: 3 (lower is better) Translates to: PHLGDSSISFTEDILGVHGWHRP*LCPPGP Trigger: CGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCC...ATGGACACCTAGAATATCCTCCGTAAAAGATATGGAAGAGTCTCCAAGATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGATGTCAGGACACTGCCATCTCATCCTGGAAGCCATCCATTGTCATCCTCTCAAGGCTTATCTCAGCTaGCTGCCTCTACAAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QMSGHCHLILEAIHCHPLKAYLS*LPLQVL Trigger: CAGCACTTGTAGAGGCAGCAAGCTGAGATAAGCCTT...GAGAGGATGACAATGGATGGCTTCCAGGATGAGATGGCAGTGTCCTGACATCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | GCTCCCTTGGAGCACGGTGGCCTAGCGGCCATGGGATaGGTTTTTAATATGAGGCAAAGACAGTCCACAATA | + |
|
Preference number: 3 (lower is better) Translates to: APLEHGGLAAMG*VFNMRQRQSTI Trigger: TATTGTGGACTGTCTTTGCCTCATATTAAAAACTCATCCCATGGCCGCTAGGCCACCGTGCTCCAAGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | AGGGAGGGAGACTTTGGCTTTGGGATCTCTAACTCTTaGCTGACCTTGGATGGCCTCTTCTGTTCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: REGDFGFGISNS*LTLDGLFCSLE Trigger: TTCCAGAGAACAGAAGAGGCCATCCAAGGTCAGGCAAGAGTTAGAGATCCCAAAGCCAAAGTCTCCCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | TCTTGCAGGATGTCAGCTCCGGAGAGCCACCATTTGTaGTCCCTGTTAGGTCCTTATCAACTTAGCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCRMSAPESHHL*SLLGPYQLSWC Trigger: ACACCAGCTAAGTTGATAAGGACCTAACAGGGAGCACAAATGGTGGCTCTCCGGAGCTGACATCCTGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | AGGGAGACTTTGGCTTTGGGATCTCTAACTCTTGCCTaGCCTTGGATGGCCTCTTCTGTTCTCTGGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: RETLALGSLTLA*PWMASSVLWNL Trigger: CAGATTCCAGAGAACAGAAGAGGCCATCCAAGGTCAGGCAAGAGTTAGAGATCCCAAAGCCAAAGTCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | CATGTTTTCCGAGGACTGTTTCTTCTCAGCCACCACTaGCTGAGGAAAACGCAGCTCAGGGATGAAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HVFRGLFLLSHH*LRKTQLRDETK Trigger: CTTTGTTTCATCCCTGAGCTGCGTTTTCCTCAGTCAGTGGTGGCTGAGAAGAAACAGTCCTCGGAAAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CCCTCCACTCTTATTCCCCAGGCTCTGGACAGCCTTTaGTCTCTGACCATTTCCAATCTGTTCATTTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSTLIPQALDSL*SLTISNLFILV Trigger: GACTAAAATGAACAGATTGGAAATGGTCAGAGAGCAAAGGCTGTCCAGAGCCTGGGGAATAAGAGTGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR GCA 72 bp | CTTTTAGCTGAAGAAAGGGATCAGATGTCAGGACACTaGCATCTCATCCTGGAAGCCATCCATTGTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLAEERDQMSGH*HLILEAIHCHP Trigger: AGGATGACAATGGATGGCTTCCAGGATGAGATGGCAGTGTCCTGACATCTGATCCCTTTCTTCAGCTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAAAAGGCATCGTTACTCTaGTCACCTTGTGTGCATCCG | + |
|
Preference number: 3 (lower is better) Translates to: QPGKTGIHPTGYSFHVYEKASLL*SPCVHP Trigger: CGGATGCACACAAGGTGACAAGAGTAACGATGCCTT...TTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| 3UTR TCA 72 bp | GGCATCGTTACTCTTGTCACCTTGTGTGCATCCGCATaGTGCCGTACGTATCTTCATAGTTATCTCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GIVTLVTLCASA*CRTYLHSYLFQ Trigger: TTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATGCACACAAGGTGACAAGAGTAACGATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| 3UTR CCA 72 bp | CATTTGTGCTCCCTGTTAGGTCCTTATCAACTTAGCTaGTGTCTGACACTGCATGGAAACAGAAAGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HLCSLLGPYQLS*CLTLHGNRKTF Trigger: GAAAGTCTTTCTGTTTCCATGCAGTGTCAGACACCAGCTAAGTTGATAAGGACCTAACAGGGAGCACAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR TCA 72 bp | TGGAATACATCCCACAGGCTATTCATTTCATGTGTATaGATTAGCTTCCACTTAGTCCAAGGCATCGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: WNTSHRLFISCV*ISFHLVQGIVT Trigger: AGTAACGATGCCTTGGACTAAGTGGAAGCTAATTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGCGAGACACCAACGACGCTaGTTAGGCCCAGGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGGPDSLEPGAGPALPPARHQRR*LGPGTP Trigger: TGGTGTGCCTGGGCCTAAGCAGCGTCGTTGGTGTCT...CGCAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCATGGCGCTGGGATTCTaGGGGCGCCGGCGACGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QREQAAEACSPSWGHRRLMALGF*GRRRRG Trigger: CCCTCGTCGCCGGCGCCCGCAGAATCCCAGCGCCAT...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| 3UTR CAA 72 bp | TGGCGGGGGCGAGAGAGGTGGCGCTTTCCTTCCCGCTaGCAAGGCCCTTCCTGGCGCACCCCGCAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRGRERWRFPSR*QGPSWRTPQDA Trigger: GGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCCGTAGGCCAGCGCGATaGCCTCGGGCGTGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VASCRCLLFCVAHRSSPARRPAR*PRAWRA Trigger: CGCCCTCCACGCCCGAGGGCATCGCGCTGGCCTACG...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGCCGTTGGCTGGGGTaGCAGCCTCGGCGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VASCRCLLFCVAHRSSPACRWLG*QPRRCR Trigger: ACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCA...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCCTAGCTTCTGCTGCATaGAGTCGGCCAGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QREQAAEACSPSWGHRRLLASAA*SRPGWQ Trigger: CTGCCAGCCTGGCCGACTCCATGCAGCAGAAGCTAG...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCGGACAGGAAAGCCGATaGAGGCAGGGACCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QREQAAEACSPSWGHRRLGQESR*RQGPGT Trigger: TGTACCTGGTCCCTGCCTGCATCGGCTTTCCTGTCC...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCGTGTGCAGCTGGCGATaGTGGGGAAGCGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCVCSWR*WGSGRH Trigger: ATGCCGCCCGCTTCCCCATCATCGCCAGCTGCACAC...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCTGTAGGCGGCGAAGCTaGTGTAGAAGTAGGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QREQAAEACSPSWGHRRLCRRRS*CRSRCA Trigger: CGCACACCTACTTCTACACCAGCTTCGCCGCCTACA...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | TCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTTGGAGTCGGCCAGGCTaGCAGGGGAGCCCGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPAGVFSSVSPTGHPLPWSRPG*QGSPRL Trigger: CAGTCTCGGGCTCCCCTGCCAGCCTGGCCGACTCCA...AGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCTGTGTGAAGAGCAGCTaGTACTGGCGGTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QREQAAEACSPSWGHRRLCVKSS*YWRFGK Trigger: CTTCCCAAACCGCCAGTATCAGCTGCTCTTCACACA...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | CGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGGGGCCAGCTAGCTTCTaGTGCATGGAGTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLQVSSLLCRPQVIPCLGPASF*CMESAR Trigger: CCTGGCCGACTCCATGCAGCAGAAGCTAGCTGGCCC...CAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGTGTGAGCCTCGGCGTATaGGGCAGGATTACGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASCRCLLFCVAHRSSPACVSLGV*GRITAE Trigger: CTCGGCCGTAATCCTGCCTCATACGCCGAGGCTCAC...ACAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| 3UTR CAA 72 bp | TTGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCTTaGCCCACCAGGACCGGGGCAGGAGTCCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCKGSWMAQTLA*PTRTGAGVPSP Trigger: AGGAGATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGTCCCCAGAGCCCTGTGTaGAGAGCAGCTGATACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASCRCLLFCVAHRSSPACPQSPV*RAADTG Trigger: GCCAGTATCAGCTGCTCTTCACACAGGGCTCTGGGG...ACAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCCATGGGGCTCAGGCGGTGGCGGTTCACATCTGGAGTCTAGACTCAGATGCCGTTGGCTGGGGTaGCAGCCTCGGCGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: IFPWGSGGGGSHLESRLRCRWLG*QPRRCR Trigger: ACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCA...TCTGAGTCTAGACTCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCAGACACCAACGACGCTaGTTAGGCCCAGGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VASCRCLLFCVAHRSSPARHQRR*LGPGTP Trigger: TGGTGTGCCTGGGCCTAAGCAGCGTCGTTGGTGTCT...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCTTGTTGGCAATCCAGTaGTTCCTCAGAAGGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QREQAAEACSPSWGHRRLLLAIQ*FLRRYQ Trigger: CTGGTACCTTCTGAGGAAGCACTGGATTGCCAACAA...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGCTCACGTTGTTCAGGTaGAGGAGCTCTACCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RGGAFLPACKALPGAPRRLTLFR*RSSTPL Trigger: TAATGGGGTAGAGCTCCTGCACCTGAACAACGTGAG...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGCATGGCAAAGTTGTCTaGTTCAAGGCCCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGGAFLPACKALPGAPRRHGKVV*FKALLQ Trigger: CTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATG...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | CGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGGGACAGGAAAGCCGATaGAGGCAGGGACCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RLLQVSSLLCRPQVIPCLGQESR*RQGPGT Trigger: TGTACCTGGTCCCTGCCTGCATCGGCTTTCCTGTCC...CAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | CTGGTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTaGGCCAGGCAGGCCCTGATCGGCGCTGCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVNWNWSGLCGC*ARQALIGAARS Trigger: AGACCTTGCAGCGCCGATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | TCGTTTTGTGCAAGGGCAGCTGGATGGCACAGACCCTaGCTTTGCCCACCAGGACCGGGGCAGGAGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFCARAAGWHRP*LCPPGPGQESH Trigger: ATGGGACTCCTGCCCCGGTCCTGGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCAGAGCCGGCTGGGCGTaGTTGAAGATGTGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: VASCRCLLFCVAHRSSPARAGWA*LKMCMM Trigger: CATCATGCACATCTTCAAGCACGCCCAGCCGGCTCT...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | CCGGGGCAGGAGTCCCATCTCCTGTGGCATCATCTCTaGGCACATCCACCCAGTCATTTCCGTCAGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGQESHLLWHHL*AHPPSHFRQSP Trigger: GGGAGACTGACGGAAATGACTGGGTGGATGTGCCAAGAGATGATGCCACAGGAGATGGGACTCCTGCCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | TCCTGGGGTGGTGGCGGGAGCACTGAGTTTGTCGTTTaGTGCAAGGGCAGCTGGATGGCACAGACCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWGGGGSTEFVV*CKGSWMAQTLA Trigger: AGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGACAAACTCAGTGCTCCCGCCACCACCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGGCTTTCTGAAGACCTGAGCTGTATTTTGGGAGACCTGGGGATGGAAGTGTGCAGCTGGCGATaGTGGGGAAGCGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGRLSEDLSCILGDLGMEVCSWR*WGSGRH Trigger: ATGCCGCCCGCTTCCCCATCATCGCCAGCTGCACAC...TTCCATCCCCAGGTCTCCCAAAATACAGCTCAGGTCTTCAGAAAGCCTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | CCGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGTGTGTGAAGAGCAGCTaGTACTGGCGGTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPPAGVFSSVSPTGHPLCVKSS*YWRFGK Trigger: CTTCCCAAACCGCCAGTATCAGCTGCTCTTCACACA...CAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCGTGCCTCAAAGGACTTaGCCACTGTCACCATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VASCRCLLFCVAHRSSPAVPQRT*PLSPSR Trigger: ACGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCAC...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGGTGCCTCAAAGGACTTaGCCACTGTCACCATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPPAGVFSSVSPTGHPLVPQRT*PLSPSR Trigger: ACGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCAC...CAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCCTCACGTTGTTCAGGTaGAGGAGCTCTACCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VASCRCLLFCVAHRSSPALTLFR*RSSTPL Trigger: TAATGGGGTAGAGCTCCTGCACCTGAACAACGTGAG...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCATGGCAAAGTTGTCTaGTTCAAGGCCCTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCHGKVV*FKALLQ Trigger: CTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATG...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGGGCCAAACAGGTTGTTaGCAATCCAGTGCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPPAGVFSSVSPTGHPLGQTGC*QSSASS Trigger: TGAGGAAGCACTGGATTGCCAACAACCTGTTTGGCC...CAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | GATGAGCTGCCCTCTCCTTGCCCTTTAGGGACTCGCTaGAAGGTCAGGAGGGAGGGAGACTTTGGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DELPSPCPLGTR*KVRREGDFGFG Trigger: CCCAAAGCCAAAGTCTCCCTCCCTCCTGACCTTCAAGCGAGTCCCTAAAGGGCAAGGAGAGGGCAGCTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | CGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGTGGACAGCAAGAGGTTaGTGTACTCCTGGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RLLQVSSLLCRPQVIPCLWTARG*CTPGRI Trigger: TATTCTCCCAGGAGTACATCAACCTCTTGCTGTCCA...CAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGGCTTTCTGAAGACCTGAGCTGTATTTTGGGAGACCTGGGGATGGAACCCCAGAGCCCTGTGTaGAGAGCAGCTGATACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGRLSEDLSCILGDLGMEPQSPV*RAADTG Trigger: GCCAGTATCAGCTGCTCTTCACACAGGGCTCTGGGG...TTCCATCCCCAGGTCTCCCAAAATACAGCTCAGGTCTTCAGAAAGCCTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCAGAAGATGTCATAGATaGAGAGTCCTCCGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCRRCHR*RVLRAG Trigger: TCCTGCTCGGAGGACTCTTCATCTATGACATCTTCT...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGACTGGTGATGGTTTCTaGCATGTCCGAAGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLQVSSLLCRPQVIPCLTGDGF*HVRRAL Trigger: AAGAGCTCTTCGGACATGCCAGAAACCATCACCAGT...CAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGTTGGGTGGCTGACTCGGTGGCCCAGCAGAGCAGCCACAGTGACTTCTTCAGTCTCGGCTGCTaGATCTTTAGGGTTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QRSWVADSVAQQSSHSDFFSLGC*IFRVGL Trigger: GAGTCCAACCCTAAAGATCCAGCAGCCGAGACTGAA...GAAGTCACTGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCCAACTTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGATCTGGCCCTCAAGGGTCAGGCAGCGCTGCCTCATTTCTCCTTCTTCTCCTGTCACCATCACGTTaGTGCCGAATACCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRSGPQGSGSAASFLLLLLSPSR*CRIPRR Trigger: TCTTCTGGGTATTCGGCACCAACGTGATGGTGACAG...GAGAAGAAGGAGAAATGAGGCAGCGCTGCCTGACCCTTGAGGGCCAGATCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR GCA 90 bp | CAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAACGTAGGCCAGCGCGATaGCCTCGGGCGTGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPGKTGIHPTGYSFHVYERRPAR*PRAWRA Trigger: CGCCCTCCACGCCCGAGGGCATCGCGCTGGCCTACG...TTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCCCCAGAGGAATGCCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCATTGTTGGCAATCCAGTaGTTCCTCAGAAGGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPQRNAILQDVSSGEPPLLAIQ*FLRRYQ Trigger: CTGGTACCTTCTGAGGAAGCACTGGATTGCCAACAA...TGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGGCATTCCTCTGGGGAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGATCTGGCCCTCAAGGGTCAGGCAGCGCTGCCTCATTTCTCCTTCTTCTCACTGGTGATGGTTTCTaGCATGTCCGAAGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSGPQGSGSAASFLLLLTGDGF*HVRRAL Trigger: AAGAGCTCTTCGGACATGCCAGAAACCATCACCAGT...GAGAAGAAGGAGAAATGAGGCAGCGCTGCCTGACCCTTGAGGGCCAGATCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCCATGGGGCTCAGGCGGTGGCGGTTCACATCTGGAGTCTAGACTCAGATGTAGGCGGCGAAGCTaGTGTAGAAGTAGGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IFPWGSGGGGSHLESRLRCRRRS*CRSRCA Trigger: CGCACACCTACTTCTACACCAGCTTCGCCGCCTACA...TCTGAGTCTAGACTCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | CCTTCTTCTCTAGCCTCTTCGATGCCGACGCCTCTGTaGACTCCTCTTTGGATTCAGTCTCGGCTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLASSMPTPL*TPLWIQSRLLD Trigger: ATCCAGCAGCCGAGACTGAATCCAAAGAGGAGTCAACAGAGGCGTCGGCATCGAAGAGGCTAGAGAAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGTGTTCTTCTTCAAGCTaGTGTCAAAACGAAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLLQVSSLLCRPQVIPCLCSSSS*CQNEAV Trigger: TACTGCTTCGTTTTGACATCAGCTTGAAGAAGAACA...CAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR GCA 90 bp | TTGACAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGCCGTTGGCTGGGGTaGCAGCCTCGGCGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTRKDWNTSHRLFISCVCRWLG*QPRRCR Trigger: ACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCA...TACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| 3UTR CAA 72 bp | CCATCTTGCAGGATGTCAGCTCCGGAGAGCCACCATTaGTGCTCCCTGTTAGGTCCTTATCAACTTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSCRMSAPESHH*CSLLGPYQLSW Trigger: CCAGCTAAGTTGATAAGGACCTAACAGGGAGCACAAATGGTGGCTCTCCGGAGCTGACATCCTGCAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGTTGTTCTTCTTCAAGCTaGTGTCAAAACGAAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASCRCLLFCVAHRSSPACCSSSS*CQNEAV Trigger: TACTGCTTCGTTTTGACATCAGCTTGAAGAAGAACA...ACAGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGATCTGGCCCTCAAGGGTCAGGCAGCGCTGCCTCATTTCTCCTTCTTCTCTTCTCCAGCAGATCCTaGGGGAACACCAATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VRSGPQGSGSAASFLLLLFSSRS*GNTNFI Trigger: AATAAAATTGGTGTTCCCCCAGGATCTGCTGGAGAA...GAGAAGAAGGAGAAATGAGGCAGCGCTGCCTGACCCTTGAGGGCCAGATCGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| 3UTR CAA 72 bp | GACTTTGGCTTTGGGATCTCTAACTCTTGCCTGACCTaGGATGGCCTCTTCTGTTCTCTGGAATCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DFGFGISNSCLT*DGLFCSLESAP Trigger: GGGAGCAGATTCCAGAGAACAGAAGAGGCCATCCAAGGTCAGGCAAGAGTTAGAGATCCCAAAGCCAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAATGTGTGCAGCTGGCGATaGTGGGGAAGCGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NQERLEYIPQAIHFMCMNVCSWR*WGSGRH Trigger: ATGCCGCCCGCTTCCCCATCATCGCCAGCTGCACAC...ATTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR TCA 90 bp | GTGCATCCGCATGATGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTTACCCCCAGAGCCCTGTGTaGAGAGCAGCTGATACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHPHDAVRIFIVISFKAYPQSPV*RAADTG Trigger: GCCAGTATCAGCTGCTCTTCACACAGGGCTCTGGGG...GTAAGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR GCA 90 bp | CCCCATCTTGGAGACTCTTCCATATCTTTTACGGAGGATATTCTAGGTGTCCATAGAGCCGGCTGGGCGTaGTTGAAGATGTGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: PHLGDSSISFTEDILGVHRAGWA*LKMCMM Trigger: CATCATGCACATCTTCAAGCACGCCCAGCCGGCTCT...ATGGACACCTAGAATATCCTCCGTAAAAGATATGGAAGAGTCTCCAAGATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| 3UTR CAA 72 bp | CCTGAAACTTGCTATGTAGACAAGGCTTATCTCAGCTaGCTGCCTCTACAAGTGCTGGGATGGCAGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: PETCYVDKAYLS*LPLQVLGWQAY Trigger: ATATGCCTGCCATCCCAGCACTTGTAGAGGCAGCAAGCTGAGATAAGCCTTGTCTACATAGCAAGTTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CCA 90 bp | CATCCGCATGATGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTTACGTGACACCCCAGGGGACATaGGCAGCACTGACCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HPHDAVRIFIVISFKAYVTPQGT*AALTFF Trigger: AAAGAAGGTCAGTGCTGCCCATGTCCCCTGGGGTGT...CACGTAAGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR TCA 90 bp | CATCCGCATGATGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTTACGTGTGTGTGAAGAGCAGCTaGTACTGGCGGTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPHDAVRIFIVISFKAYVCVKSS*YWRFGK Trigger: CTTCCCAAACCGCCAGTATCAGCTGCTCTTCACACA...CACGTAAGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR TCA 90 bp | CATCCGCATGATGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTTACGTGGGACATGGGCAGCACTaGCCTTCTTTGTTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPHDAVRIFIVISFKAYVGHGQH*PSLFSP Trigger: TGGGGAAAACAAAGAAGGTCAGTGCTGCCCATGTCC...CACGTAAGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| CDS-3UTR CCA 90 bp | ATCAGATGTCAGGACACTGCCATCTCATCCTGGAAGCCATCCATTGTCATCCTCTTCTCCAGCAGATCCTaGGGGAACACCAATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: IRCQDTAISSWKPSIVILFSSRS*GNTNFI Trigger: AATAAAATTGGTGTTCCCCCAGGATCTGCTGGAGAA...GAGGATGACAATGGATGGCTTCCAGGATGAGATGGCAGTGTCCTGACATCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| 3UTR CAA 72 bp | TCCCTCCACTCTTATTCCCCAGGCTCTGGACAGCCTTaGCTCTCTGACCATTTCCAATCTGTTCATTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHSYSPGSGQP*LSDHFQSVHFS Trigger: ACTAAAATGAACAGATTGGAAATGGTCAGAGAGCAAAGGCTGTCCAGAGCCTGGGGAATAAGAGTGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| CDS-3UTR TCA 90 bp | CAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAATGGACAGCAAGAGGTTaGTGTACTCCTGGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QPGKTGIHPTGYSFHVYEWTARG*CTPGRI Trigger: TATTCTCCCAGGAGTACATCAACCTCTTGCTGTCCA...TTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| CDS-3UTR CCA 90 bp | ACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAATTAGCTTCCACTACTGGTGATGGTTTCTaGCATGTCCGAAGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGIHPTGYSFHVYELASTTGDGF*HVRRAL Trigger: AAGAGCTCTTCGGACATGCCAGAAACCATCACCAGT...AGTGGAAGCTAATTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| CDS-3UTR CCA 90 bp | ACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAATTAGCTTCCACTTGGAAAACCCAGTACTaGAGAAAGACAAGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGIHPTGYSFHVYELASTWKTQY*RKTRGE Trigger: TTCCCCTCTTGTCTTTCTCCAGTACTGGGTTTTCCA...AGTGGAAGCTAATTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR CCA 90 bp | CAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAAACTCCATTTTACAGATaGGGTAACAAACCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPGKTGIHPTGYSFHVYETPFYR*GNKPPK Trigger: TTTTGGAGGTTTGTTACCCCATCTGTAAAATGGAGT...TTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS GCA 90 bp | CGTAGGCCAGCGCGATGCCCTCGGGCGTGGAGGGCGGCCGCGTCGTaGCGTTGGCTGGGGTGCCAGCCTCGGCGCTGCCGTTGTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRPARCPRAWRAAAS*RWLGCQPRRCRCAD Trigger: ATCCGCACAACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAGGGCATCGCGCTGGCCTACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS CCA 90 bp | CGCGATGCCCTCGGGCGTGGAGGGCGGCCGCGTCGTGCCGTTGGCTaGGGTGCCAGCCTCGGCGCTGCCGTTGTGCGGATCGCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDALGRGGRPRRAVG*GASLGAAVVRIADS Trigger: GCTGTCAGCGATCCGCACAACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAGGGCATCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS TCA 90 bp | AGCGCACCGAGCGCAGGGCGCCGAAGAAGATGGGCAGCAGCGCCATaGGCAGGAGGCTGCCGTAGGCCAGCGCGATGCCCTCGGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPSAGRRRRWAAAP*AGGCRRPARCPRAW Trigger: CCACGCCCGAGGGCATCGCGCTGGCCTACGGCAGCCTCCTGCTCATGGCGCTGCTGCCCATCTTCTTCGGCGCCCTGCGCTCGGTGCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS GCA 90 bp | GCGCTGGGATTCTGCGGGCGCCGGCGACGAGGGCCAGCTAGCTTCTaGTGCATGGAGTCGGCCAGGCTGGCAGGGGAGCCCGAGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGFCGRRRRGPASF*CMESARLAGEPETV Trigger: CACAGTCTCGGGCTCCCCTGCCAGCCTGGCCGACTCCATGCAGCAGAAGCTAGCTGGCCCTCGTCGCCGGCGCCCGCAGAATCCCAGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCGCCTCGGCGCTGCCGTaGTGCGGATCGCTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QREQAAEACSPSWGHRRLASALP*CGSLTA Trigger: GGCTGTCAGCGATCCGCACAACGGCAGCGCCGAGGC...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS GCA 90 bp | CTGGGATTCTGCGGGCGCCGGCGACGAGGGCCAGCTAGCTTCTGCTaGATGGAGTCGGCCAGGCTGGCAGGGGAGCCCGAGACTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGFCGRRRRGPASFC*MESARLAGEPETVG Trigger: TCCCACAGTCTCGGGCTCCCCTGCCAGCCTGGCCGACTCCATGCAGCAGAAGCTAGCTGGCCCTCGTCGCCGGCGCCCGCAGAATCCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGCGGCCCAGACTCGCTGGAGCCAGGCGCTGGCCCGGCGCTACCGCCTGACTGTCACCATCACGTaGGTGCCGAATACCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRAAQTRWSQALARRYRLTVTIT*VPNTQK Trigger: CTTCTGGGTATTCGGCACCAACGTGATGGTGACAGT...CAGGCGGTAGCGCCGGGCCAGCGCCTGGCTCCAGCGAGTCTGGGCCGCCCTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | GCGCACCCCGCAGGATGCCGCTCCTCCCGTGGCCGGCAGTCACGCGGGGAGTCCCCCAGCATGGCAAAGTaGTCTGCTTCAAGGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AHPAGCRSSRGRQSRGESPSMAK*SASRPF Trigger: GAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGG...GGACTCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS CCA 90 bp | GATTCTGCGGGCGCCGGCGACGAGGGCCAGCTAGCTTCTGCTGCATaGAGTCGGCCAGGCTGGCAGGGGAGCCCGAGACTGTGGGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DSAGAGDEGQLASAA*SRPGWQGSPRLWES Trigger: ACTTTCCCACAGTCTCGGGCTCCCCTGCCAGCCTGGCCGACTCCATGCAGCAGAAGCTAGCTGGCCCTCGTCGCCGGCGCCCGCAGAATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR CAA 90 bp | TCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCTGGCCGCGTCGTGCCGTaGGCTGGGGTGCCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPPAGVFSSVSPTGHPLPGRVVP*AGVPAS Trigger: CGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCC...AGGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCGCCTCGGCGCTGCCGTaGTGCGGATCGCTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCASALP*CGSLTA Trigger: GGCTGTCAGCGATCCGCACAACGGCAGCGCCGAGGC...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGATGCCGCTCCTCCCGCAGCCAGTGCTCACGTaGTTCAGGTGCAGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPACKALPGAPRRMPLLPQPVLT*FRCRSS Trigger: AGAGCTCCTGCACCTGAACAACGTGAGCACTGGCTG...CGGGAGGAGCGGCATCCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS TCA 90 bp | AGTCGGCCAGGCTGGCAGGGGAGCCCGAGACTGTGGGAAAGTGAGTaGGCCTCGGCGTATGAGGCAGGATTACGGCCGAGGACTCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRPGWQGSPRLWESE*ASAYEAGLRPRTRS Trigger: GCTACGAGTCCTCGGCCGTAATCCTGCCTCATACGCCGAGGCTCACTCACTTTCCCACAGTCTCGGGCTCCCCTGCCAGCCTGGCCGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCAGGCCAAACAGGTTGTaGGCAATCCAGTGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QREQAAEACSPSWGHRRLRPNRL*AIQCFL Trigger: GAGGAAGCACTGGATTGCCAACAACCTGTTTGGCCT...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCTCGGCCACTTCTCCCTaGGCTAGTGCCACCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCSATSP*ASATRT Trigger: TGTCCTGGTGGCACTAGCCAAGGGAGAAGTGGCCGA...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAACAGGCAGCAGAGGCCTGCTCCCCATCCTGGGGCCACCGTCGCCTCATGGACAGCAAGAGGTaGATGTACTCCTGGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QREQAAEACSPSWGHRRLMDSKR*MYSWEN Trigger: ATTCTCCCAGGAGTACATCAACCTCTTGCTGTCCAT...GAGGCGACGGTGGCCCCAGGATGGGGAGCAGGCCTCTGCTGCCTGTTCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCAGCCAGTGCTCACGTaGTTCAGGTGCAGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLLQVSSLLCRPQVIPCQPVLT*FRCRSS Trigger: AGAGCTCCTGCACCTGAACAACGTGAGCACTGGCTG...GCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCCCCAGCATGGCAAAGTaGTCTGCTTCAAGGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VASCRCLLFCVAHRSSPAPSMAK*SASRPF Trigger: GAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGG...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGGCGCTTTCCTTCCCGCTTGCAAGGCCCTTCCTGGCGCACCCCGCAGGTTGATGATCTCTTCTTaGTTTTCCCCAGAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGAFLPACKALPGAPRRLMISS*FSPEPC Trigger: ACAGGGCTCTGGGGAAAACAAAGAAGAGATCATCAA...CCTGCGGGGTGCGCCAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGACTGTCACCATCACGTaGGTGCCGAATACCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPAGVFSSVSPTGHPLTVTIT*VPNTQK Trigger: CTTCTGGGTATTCGGCACCAACGTGATGGTGACAGT...CAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGTTGGGTGGCTGACTCGGTGGCCCAGCAGAGCAGCCACAGTGACTTCAGGCCAAACAGGTTGTaGGCAATCCAGTGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRSWVADSVAQQSSHSDFRPNRL*AIQCFL Trigger: GAGGAAGCACTGGATTGCCAACAACCTGTTTGGCCT...GAAGTCACTGTGGCTGCTCTGCTGGGCCACCGAGTCAGCCACCCAACTTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | GTCCGATCTGGCCCTCAAGGGTCAGGCAGCGCTGCCTCATTTCTCCTTCTTCTCGCCAGGCCAAACAGGTaGTTGGCAATCCAGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRSGPQGSGSAASFLLLLARPNR*LAIQCF Trigger: GAAGCACTGGATTGCCAACAACCTGTTTGGCCTGGC...GAGAAGAAGGAGAAATGAGGCAGCGCTGCCTGACCCTTGAGGGCCAGATCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS GCA 90 bp | AAGAGTCCTCCGAGCAGGATACAGCCAGTGCTCACGTTGTTCAGGTaGAGGAGCTCTACCCCATTAAGGGAGAAGGCCAGGCCAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSPPSRIQPVLTLFR*RSSTPLREKARPNR Trigger: CCTGTTTGGCCTGGCCTTCTCCCTTAATGGGGTAGAGCTCCTGCACCTGAACAACGTGAGCACTGGCTGTATCCTGCTCGGAGGACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | GTCCGATCTGGCCCTCAAGGGTCAGGCAGCGCTGCCTCATTTCTCCTTCTTCTCGCTGATACTGGCGGTTaGGGAAGTTGGCTGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VRSGPQGSGSAASFLLLLADTGG*GSWLEK Trigger: TTTTTCCAGCCAACTTCCCAAACCGCCAGTATCAGC...GAGAAGAAGGAGAAATGAGGCAGCGCTGCCTGACCCTTGAGGGCCAGATCGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCTCAGTTTTTCCACCTGGGCAGGTGGACGAGGGATGAGCTGCCCTCTCCTGCTGATACTGGCGGTTaGGGAAGTTGGCTGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSQFFHLGRWTRDELPSPADTGG*GSWLEK Trigger: TTTTTCCAGCCAACTTCCCAAACCGCCAGTATCAGC...AGGAGAGGGCAGCTCATCCCTCGTCCACCTGCCCAGGTGGAAAAACTGAGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGTTGATGATCTCTTCTTaGTTTTCCCCAGAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPPAGVFSSVSPTGHPLLMISS*FSPEPC Trigger: ACAGGGCTCTGGGGAAAACAAAGAAGAGATCATCAA...CAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | GTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGCCGGAACACCAATTTTATaGGTGCCTCAAAGGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VASCRCLLFCVAHRSSPAGTPIL*VPQRTW Trigger: CCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTCC...GGCAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCGCCTCCTGCAGGTGTCTTCTCTTCTGTGTCGCCCACAGGTCATCCCCTGGGAACACCAATTTTATaGGTGCCTCAAAGGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPAGVFSSVSPTGHPLGTPIL*VPQRTW Trigger: CCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTCC...CAGGGGATGACCTGTGGGCGACACAGAAGAGAAGACACCTGCAGGAGGCGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATTGGAACTGGAGTGGCCTCTGTGGCTGCTTGGCCAGGCAGGCCCTGATCTCTGTTGACTCCTCTTaGGATTCAGTCTCGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNWNWSGLCGCLARQALISVDSS*DSVSAA Trigger: AGCAGCCGAGACTGAATCCAAAGAGGAGTCAACAGA...GATCAGGGCCTGCCTGGCCAAGCAGCCACAGAGGCCACTCCAGTTCCAATTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS-3UTR CAA 90 bp | CATCCGCATGATGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTTACGTGGCCTCGGCGCTGCCGTaGTGCGGATCGCTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HPHDAVRIFIVISFKAYVASALP*CGSLTA Trigger: GGCTGTCAGCGATCCGCACAACGGCAGCGCCGAGGC...CACGTAAGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTATGAATGGCCGCGTCGTGCCGTaGGCTGGGGTGCCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NQERLEYIPQAIHFMCMNGRVVP*AGVPAS Trigger: CGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCC...ATTCATACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCACAGAGAGGACACCACAAACCAGGGGAAATCTGTTTGAAAGCAGCTTCCTCGGCCACTTCTCCCTaGGCTAGTGCCACCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KAQRGHHKPGEICLKAASSATSP*ASATRT Trigger: TGTCCTGGTGGCACTAGCCAAGGGAGAAGTGGCCGA...GGAAGCTGCTTTCAAACAGATTTCCCCTGGTTTGTGGTGTCCTCTCTGTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
||
| CDS TCA 90 bp | GACATGGGCAGCACTGACCTTCTTTGTTTTCCCCAGAGCCCTGTGTaGAGAGCAGCTGATACTGGCGGTTTGGGAAGTTGGCTGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DMGSTDLLCFPQSPV*RAADTGGLGSWLEK Trigger: TTTTTCCAGCCAACTTCCCAAACCGCCAGTATCAGCTGCTCTTCACACAGGGCTCTGGGGAAAACAAAGAAGGTCAGTGCTGCCCATGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
||
| CDS GCA 90 bp | CCCTGGAATGACAATGTCTCCAAGTCCCAGCATGGCAAAGTTGTCTaGTTCAAGGCCCTTCTCCAGCAGATCCTGGGGGAACACCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PWNDNVSKSQHGKVV*FKALLQQILGEHQF Trigger: AAATTGGTGTTCCCCCAGGATCTGCTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGGACTTGGAGACATTGTCATTCCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000125366.8 |
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| CDS CCA 90 bp | GCAGATCCTGGGGGAACACCAATTTTATTGGTGCCTCAAAGGACTTaGCCACTGTCACCATCACGTTGGTGCCGAATACCCAGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: ADPGGTPILLVPQRT*PLSPSRWCRIPRRC Trigger: ACATCTTCTGGGTATTCGGCACCAACGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTCCCCCAGGATCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
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| CDS CCA 90 bp | GCAGATCCTGGGGGAACACCAATTTTATTGGTGCCTCAAAGGACTTaGCCACTGTCACCATCACGTTGGTGCCGAATACCTTCCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ADPGGTPILLVPQRT*PLSPSRWCRIPSSE Trigger: TTCTGAGGAAGGTATTCGGCACCAACGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTCCCCCAGGATCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079247.4 |
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| CDS-3UTR CAA 90 bp | CTATGCTGTCCCCAAAGACAAGAAACAGGAATTCAGCACAGTGGTGAACATGAGGCCAGGCCAAACAGGTaGTTGGCAATCCAGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCCPQRQETGIQHSGEHEARPNR*LAIQCF Trigger: GAAGCACTGGATTGCCAACAACCTGTTTGGCCTGGC...CTCATGTTCACCACTGTGCTGAATTCCTGTTTCTTGTCTTTGGGGACAGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| CDS-3UTR CAA 90 bp | CTATGCTGTCCCCAAAGACAAGAAACAGGAATTCAGCACAGTGGTGAACATGAGATGGACAGCAAGAGGTaGATGTACTCCTGGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LCCPQRQETGIQHSGEHEMDSKR*MYSWEN Trigger: ATTCTCCCAGGAGTACATCAACCTCTTGCTGTCCAT...CTCATGTTCACCACTGTGCTGAATTCCTGTTTCTTGTCTTTGGGGACAGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125366.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGCATCCGCATGATGCCGTACGTATCTTCATAGTTATCTCTTTCAAAGCTGCTGATACTGGCGGTTaGGGAAGTTGGCTGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CVHPHDAVRIFIVISFKAADTGG*GSWLEK Trigger: TTTTTCCAGCCAACTTCCCAAACCGCCAGTATCAGC...AGCTTTGAAAGAGATAACTATGAAGATACGTACGGCATCATGCGGATGCACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| CDS-3UTR CAA 90 bp | TTGACAACCAGGAAAGACTGGAATACATCCCACAGGCTATTCATTTCATGTGTAATGGACAGCAAGAGGTaGATGTACTCCTGGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTTRKDWNTSHRLFISCVMDSKR*MYSWEN Trigger: ATTCTCCCAGGAGTACATCAACCTCTTGCTGTCCAT...TACACATGAAATGAATAGCCTGTGGGATGTATTCCAGTCTTTCCTGGTTGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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| CDS GCA 72 bp | GCGCGATGCCCTCGGGCGTGGAGGGCGGCCGCGTCGTaGCGTTGGCTGGGGTGCCAGCCTCGGCGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ARCPRAWRAAAS*RWLGCQPRRCR Trigger: ACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAGGGCATCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS CCA 72 bp | TGCCCTCGGGCGTGGAGGGCGGCCGCGTCGTGCCGTTaGCTGGGGTGCCAGCCTCGGCGCTGCCGTTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CPRAWRAAASCR*LGCQPRRCRCA Trigger: CGCACAACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAGGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS CCA 72 bp | GGAGGCTGCCGTAGGCCAGCGCGATGCCCTCGGGCGTaGAGGGCGGCCGCGTCGTGCCGTTGGCTGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGCRRPARCPRA*RAAASCRWLGC Trigger: GCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAGGGCATCGCGCTGGCCTACGGCAGCCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS CAA 90 bp | GCCAGCGCGATGCCCTCGGGCGTGGAGGGCGGCCGCGTCGTGCCGTaGGCTGGGGTGCCAGCCTCGGCGCTGCCGTTGTGCGGATCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASAMPSGVEGGRVVP*AGVPASALPLCGSL Trigger: CAGCGATCCGCACAACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAGGGCATCGCGCTGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS CCA 72 bp | CTCGGGCGTGGAGGGCGGCCGCGTCGTGCCGTTGGCTaGGGTGCCAGCCTCGGCGCTGCCGTTGTGCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LGRGGRPRRAVG*GASLGAAVVRI Trigger: GATCCGCACAACGGCAGCGCCGAGGCTGGCACCCCAGCCAACGGCACGACGCGGCCGCCCTCCACGCCCGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS GCA 72 bp | TTCTGCGGGCGCCGGCGACGAGGGCCAGCTAGCTTCTaGTGCATGGAGTCGGCCAGGCTGGCAGGGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FCGRRRRGPASF*CMESARLAGEP Trigger: GGGCTCCCCTGCCAGCCTGGCCGACTCCATGCAGCAGAAGCTAGCTGGCCCTCGTCGCCGGCGCCCGCAGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089059.9 |
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| CDS CCA 72 bp | GGCGCCGGCGACGAGGGCCAGCTAGCTTCTGCTGCATaGAGTCGGCCAGGCTGGCAGGGGAGCCCGAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGDEGQLASAA*SRPGWQGSPRL Trigger: CAGTCTCGGGCTCCCCTGCCAGCCTGGCCGACTCCATGCAGCAGAAGCTAGCTGGCCCTCGTCGCCGGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 |
||
| CDS CCA 72 bp | GGGGAAGCGGGCGGCATCTCGACTGGTGATGGTTTCTaGCATGTCCGAAGAGCTCTTGCCGCGGGCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GEAGGISTGDGF*HVRRALAAGAA Trigger: CGCTGCGCCCGCGGCAAGAGCTCTTCGGACATGCCAGAAACCATCACCAGTCGAGATGCCGCCCGCTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS CAA 90 bp | GCGGCATCTCGACTGGTGATGGTTTCTGGCATGTCCGAAGAGCTCTaGCCGCGGGCGCAGCGCACCGAGCGCAGGGCGCCGAAGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AASRLVMVSGMSEEL*PRAQRTERRAPKKM Trigger: CATCTTCTTCGGCGCCCTGCGCTCGGTGCGCTGCGCCCGCGGCAAGAGCTCTTCGGACATGCCAGAAACCATCACCAGTCGAGATGCCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000109825.8 ENSMUST00000125366.8 |
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| CDS TCA 72 bp | GGCTGGCAGGGGAGCCCGAGACTGTGGGAAAGTGAGTaGGCCTCGGCGTATGAGGCAGGATTACGGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GWQGSPRLWESE*ASAYEAGLRPR Trigger: CCTCGGCCGTAATCCTGCCTCATACGCCGAGGCTCACTCACTTTCCCACAGTCTCGGGCTCCCCTGCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 |
||
| CDS GCA 72 bp | CCGAGCAGGATACAGCCAGTGCTCACGTTGTTCAGGTaGAGGAGCTCTACCCCATTAAGGGAGAAGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRIQPVLTLFR*RSSTPLREKAR Trigger: CCTGGCCTTCTCCCTTAATGGGGTAGAGCTCCTGCACCTGAACAACGTGAGCACTGGCTGTATCCTGCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS CAA 72 bp | AAGAGTCCTCCGAGCAGGATACAGCCAGTGCTCACGTaGTTCAGGTGCAGGAGCTCTACCCCATTAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KSPPSRIQPVLT*FRCRSSTPLRE Trigger: CTCCCTTAATGGGGTAGAGCTCCTGCACCTGAACAACGTGAGCACTGGCTGTATCCTGCTCGGAGGACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS GCA 72 bp | GACAATGTCTCCAAGTCCCAGCATGGCAAAGTTGTCTaGTTCAAGGCCCTTCTCCAGCAGATCCTGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DNVSKSQHGKVV*FKALLQQILGE Trigger: TTCCCCCAGGATCTGCTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGGACTTGGAGACATTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000125366.8 |
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| CDS CAA 90 bp | AAGATCCCTGGAATGACAATGTCTCCAAGTCCCAGCATGGCAAAGTaGTCTGCTTCAAGGCCCTTCTCCAGCAGATCCTGGGGGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: KIPGMTMSPSPSMAK*SASRPFSSRSWGNT Trigger: GGTGTTCCCCCAGGATCTGCTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGGACTTGGAGACATTGTCATTCCAGGGATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS CCA 72 bp | GGGGGAACACCAATTTTATTGGTGCCTCAAAGGACTTaGCCACTGTCACCATCACGTTGGTGCCGAATACCC | + |
|
Preference number: 6 (lower is better) Translates to: GGTPILLVPQRT*PLSPSRWCRIP Trigger: GGGTATTCGGCACCAACGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS CAA 72 bp | ACCCCATTAAGGGAGAAGGCCAGGCCAAACAGGTTGTaGGCAATCCAGTGCTTCCTCAGAAGGTACCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TPLREKARPNRL*AIQCFLRRYQT Trigger: TGTCTGGTACCTTCTGAGGAAGCACTGGATTGCCAACAACCTGTTTGGCCTGGCCTTCTCCCTTAATGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS CAA 72 bp | TCTACCCCATTAAGGGAGAAGGCCAGGCCAAACAGGTaGTTGGCAATCCAGTGCTTCCTCAGAAGGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: STPLREKARPNR*LAIQCFLRRYQ Trigger: CTGGTACCTTCTGAGGAAGCACTGGATTGCCAACAACCTGTTTGGCCTGGCCTTCTCCCTTAATGGGGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS CAA 72 bp | GGAATGACAATGTCTCCAAGTCCCAGCATGGCAAAGTaGTCTGCTTCAAGGCCCTTCTCCAGCAGATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GMTMSPSPSMAK*SASRPFSSRSW Trigger: CCAGGATCTGCTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGGACTTGGAGACATTGTCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000125366.8 |
||
| CDS TCA 72 bp | TCACGTTGGTGCCGAATACCCAGAAGATGTCATAGATaGAGAGTCCTCCGAGCAGGATACAGCCAGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRWCRIPRRCHR*RVLRAGYSQCS Trigger: TGAGCACTGGCTGTATCCTGCTCGGAGGACTCTTCATCTATGACATCTTCTGGGTATTCGGCACCAACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089059.9 ENSMUST00000125366.8 |
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| CDS CCA 72 bp | GGGGGAACACCAATTTTATTGGTGCCTCAAAGGACTTaGCCACTGTCACCATCACGTTGGTGCCGAATACCT | + |
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Preference number: 6 (lower is better) Translates to: GGTPILLVPQRT*PLSPSRWCRIP Trigger: AGGTATTCGGCACCAACGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079247.4 |
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| CDS CCA 72 bp | AAGTTGTCTGCTTCAAGGCCCTTCTCCAGCAGATCCTaGGGGAACACCAATTTTATTGGTGCCTCAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: KLSASRPFSSRS*GNTNFIGASKD Trigger: GTCCTTTGAGGCACCAATAAAATTGGTGTTCCCCCAGGATCTGCTGGAGAAGGGCCTTGAAGCAGACAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079247.4 ENSMUST00000089059.9 ENSMUST00000125366.8 |
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| CDS CAA 72 bp | CATACAAATTCGGTTTCGTCTTTAGTGCTCGTTTCTTaGGAAAACCCAGTACTGGAGAAAGACAAGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: HTNSVSSLVLVS*ENPVLEKDKRG Trigger: TCCCCTCTTGTCTTTCTCCAGTACTGGGTTTTCCAAAGAAACGAGCACTAAAGACGAAACCGAATTTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109825.8 |
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