Pregenerated sensors for GUF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029208Ensembl transcript IDs: ENSMUST00000031113.13, ENSMUST00000087228.11, ENSMUST00000132169.8, ENSMUST00000144363.8, ENSMUST00000154728.8, ENSMUST00000173205.3
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGAGGTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTaGTGCTGCCTGTACAAACTCCCAGCCACTTCTCCAGCACCATGT | + |
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Preference number: 1 (lower is better) Translates to: FEVSYAQARLGVTVS*CCLYKLPATSPAPC Trigger: ACATGGTGCTGGAGAAGTGGCTGGGAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGACCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| 3UTR TCA 90 bp | AGCAGGAAGAAAGGGCACTGGGCTTTCCTGCACACCTCTGCAGTTTaGACACTAGTTTTGGTCAGGACCGAAAGGCATGTAGCACATGTG | + |
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Preference number: 1 (lower is better) Translates to: SRKKGHWAFLHTSAV*TLVLVRTERHVAHV Trigger: CACATGTGCTACATGCCTTTCGGTCCTGACCAAAACTAGTGTTCAAACTGCAGAGGTGTGCAGGAAAGCCCAGTGCCCTTTCTTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR GCA 90 bp | AACCCCAACCTCCAGCCAGCACCCAGGGCCAGACTACTATCCCGATaGACTGTTACACTTGAGTCATTTAAGGTCAGTTTTTCTATAGCA | + |
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Preference number: 1 (lower is better) Translates to: NPNLQPAPRARLLSR*TVTLESFKVSFSIA Trigger: TGCTATAGAAAAACTGACCTTAAATGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCTGGCCCTGGGTGCTGGCTGGAGGTTGGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR TCA 90 bp | AATCCCAACAATGAGAAGGCTGAGGTGGAAAGATGGTCACAAGCTTaGGGTATGTGGTGGTTTGAGCAGAAATGGTCCCCAAAGACTCAT | + |
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Preference number: 1 (lower is better) Translates to: NPNNEKAEVERWSQA*GMWWFEQKWSPKTH Trigger: ATGAGTCTTTGGGGACCATTTCTGCTCAAACCACCACATACCTCAAGCTTGTGACCATCTTTCCACCTCAGCCTTCTCATTGTTGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| 3UTR CCA 90 bp | CTTTGCTCCCAACAGCAGCTTGAATTGCTATCTCATACAGTTGTCTaGGAAGAGACTCCTTCAGGCGTTCACATATGCTTTTGCCAACAG | + |
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Preference number: 1 (lower is better) Translates to: LCSQQQLELLSHTVV*EETPSGVHICFCQQ Trigger: CTGTTGGCAAAAGCATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR TCA 90 bp | GATAAGCGTTGCTCCAGAGGACTGAATCCCACTTTGTGTCCTACCTaGCAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATA | + |
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Preference number: 1 (lower is better) Translates to: DKRCSRGLNPTLCPT*QSAIIFPVYSVGVI Trigger: TATTACACCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGTAGGACACAAAGTGGGATTCAGTCCTCTGGAGCAACGCTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
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| 3UTR GCA 90 bp | TCTCATACAGTTGTCTGGGAAGAGACTCCTTCAGGCGTTCACATATaGTTTTGCCAACAGTGTAGGCTTTCTCTCTATGGACCACAGTTA | + |
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Preference number: 1 (lower is better) Translates to: SHTVVWEETPSGVHI*FCQQCRLSLYGPQL Trigger: TAACTGTGGTCCATAGAGAGAAAGCCTACACTGTTGGCAAAAGCATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR TCA 90 bp | GCTTTCACTGTTTCTCTTGCAATAACTTTGCTCCCAACAGCAGCTTaGATTGCTATCTCATACAGTTGTCTGGGAAGAGACTCCTTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: AFTVSLAITLLPTAA*IAISYSCLGRDSFR Trigger: CCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAGTTATTGCAAGAGAAACAGTGAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR CCA 90 bp | GTAATAACAGTGCCCAAAACAACAGGTTCCAAATATTCTGTTACTTaGGACTTCTCAGGGAACTGTGCAGGGTTGATGATTGTGATCTCC | + |
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Preference number: 1 (lower is better) Translates to: VITVPKTTGSKYSVT*DFSGNCAGLMIVIS Trigger: GGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTTGTTTTGGGCACTGTTATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR GCA 90 bp | AACAGGTTCCAAATATTCTGTTACTTGGGACTTCTCAGGGAACTGTaGAGGGTTGATGATTGTGATCTCCTTCTCTTTATATTCCTTTAT | + |
|
Preference number: 1 (lower is better) Translates to: NRFQIFCYLGLLREL*RVDDCDLLLFIFLY Trigger: ATAAAGGAATATAAAGAGAAGGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR GCA 90 bp | TTCCACCATATTTCCATTCAGCAGAATATCCATTTTAACGAGTTCTaGAGTCTGGTAACCGGCATCTTCATAATCAAAACTAACAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: FHHISIQQNIHFNEF*SLVTGIFIIKTNKD Trigger: GTCCTTGTTAGTTTTGATTATGAAGATGCCGGTTACCAGACTGCAGAACTCGTTAAAATGGATATTCTGCTGAATGGAAATATGGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR TCA 90 bp | GTATTAGTCATTACAATCAGCATTTTCAAACCTTTGAGATGTTCGTaGTCACCATCATTTCCTTACCTTGCATATCCAGAAGAGAGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: VLVITISIFKPLRCS*SPSFPYLAYPEERD Trigger: GTCTCTCTCTTCTGGATATGCAAGGTAAGGAAATGATGGTGATCACGAACATCTCAAAGGTTTGAAAATGCTGATTGTAATGACTAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR GCA 90 bp | TTTCAAACCTTTGAGATGTTCGTGATCACCATCATTTCCTTACCTTaGATATCCAGAAGAGAGAGACTTCAAAGAGTCATAAAAATCTAC | + |
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Preference number: 1 (lower is better) Translates to: FQTFEMFVITIISLP*ISRRERLQRVIKIY Trigger: GTAGATTTTTATGACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGGTAAGGAAATGATGGTGATCACGAACATCTCAAAGGTTTGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACCATCATTGGGAAGGTTaGGAACCACTGAAGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: VSYAQARLGVTVSCCCLYHHWEG*EPLKQV Trigger: GACCTGCTTCAGTGGTTCTCAACCTTCCCAATGATG...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| 3UTR CAA 90 bp | CAGCAGGAAGAAAGGGCACTGGGCTTTCCTGCACACCTCTGCAGTTaGAACACTAGTTTTGGTCAGGACCGAAAGGCATGTAGCACATGT | + |
|
Preference number: 2 (lower is better) Translates to: QQEERALGFPAHLCS*NTSFGQDRKACSTC Trigger: ACATGTGCTACATGCCTTTCGGTCCTGACCAAAACTAGTGTTCAAACTGCAGAGGTGTGCAGGAAAGCCCAGTGCCCTTTCTTCCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGTCCCCAAAGACTCATGTGTGAATGCTTGGCCCACAGGGAATGGTACTATGGTGTCAACCCCTACTaGAGACACTGGGCTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: NGPQRLMCECLAHREWYYGVNPY*RHWASH Trigger: ATGGCTAGCCCAGTGTCTTCAGTAGGGGTTGACACC...ATAGTACCATTCCCTGTGGGCCAAGCATTCACACATGAGTCTTTGGGGACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| 3UTR-3UTR CCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCGCTAGCCATGCTACATaGCAGAACTCTGTCTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: YAQARLGVTVSCCCLYKLASHAT*QNSVSR Trigger: TCTTGAGACAGAGTTCTGCCATGTAGCATGGCTAGC...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCAGCAGAAGGACTCCTATGAAATGGAAGCTGATAAGCGTTGCTCCAGAGACTTTGTGTCCTACCTaGCAAAGCGCCATTATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LPSRRTPMKWKLISVAPETLCPT*QSAIIF Trigger: AAAAATAATGGCGCTTTGTCAGGTAGGACACAAAGT...CTCTGGAGCAACGCTTATCAGCTTCCATTTCATAGGAGTCCTTCTGCTGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
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| 3UTR CAA 90 bp | AATAACTTTGCTCCCAACAGCAGCTTGAATTGCTATCTCATACAGTaGTCTGGGAAGAGACTCCTTCAGGCGTTCACATATGCTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: NNFAPNSSLNCYLIQ*SGKRLLQAFTYAFA Trigger: GGCAAAAGCATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR CAA 90 bp | GGCTTTCACTGTTTCTCTTGCAATAACTTTGCTCCCAACAGCAGCTaGAATTGCTATCTCATACAGTTGTCTGGGAAGAGACTCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GFHCFSCNNFAPNSS*NCYLIQLSGKRLLQ Trigger: CTGAAGGAGTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAGTTATTGCAAGAGAAACAGTGAAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGTCTTGCTCTAATCGCTaGTTGAAAACCTCCATATGT | + |
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Preference number: 2 (lower is better) Translates to: NCSSCLTKRHYFSSVLSRSCSNR*LKTSIC Trigger: ACATATGGAGGTTTTCAACCAGCGATTAGAGCAAGA...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGAAGAACAGCTTTGTATaGAACAGTTGGGGTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: NCSSCLTKRHYFSSVLSRKNSFV*NSWGCQ Trigger: TTGACAACCCCAACTGTTCCATACAAAGCTGTTCTT...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR CAA 90 bp | TGTAATAACAGTGCCCAAAACAACAGGTTCCAAATATTCTGTTACTaGGGACTTCTCAGGGAACTGTGCAGGGTTGATGATTGTGATCTC | + |
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Preference number: 2 (lower is better) Translates to: CNNSAQNNRFQIFCY*GLLRELCRVDDCDL Trigger: GAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTTGTTTTGGGCACTGTTATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAAGGAAACTTCCCAGCAGAAGGACTCCTATGAAATGGAAGCTGATAAGCAGACTACTATCCCGATaGACTGTTACACTTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SKRKLPSRRTPMKWKLISRLLSR*TVTLES Trigger: TGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCT...GCTTATCAGCTTCCATTTCATAGGAGTCCTTCTGCTGGGAAGTTTCCTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTCAAAGAGTCAAGACTACTATCCCGATaGACTGTTACACTTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LNCLQELAYPEERDFKESRLLSR*TVTLES Trigger: TGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCT...TGACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
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| 3UTR-3UTR GCA 90 bp | CGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAACAGACTACTATCCCGATaGACTGTTACACTTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RHYFSSVLSRCNNSAQNNRLLSR*TVTLES Trigger: TGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCT...GTTGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR GCA 90 bp | AATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGGAAGCGTTATATTCTTaGTCTAATCGCTGGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NCSSCLTKRHYFSSVLSREALYS*SNRWLK Trigger: TTTCAACCAGCGATTAGAGCAAGAATATAACGCTTC...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCCTCAGCTTCTTTTTCCCTTCGGACTGTCTCTTCAGAAGTTTCATTTTCTCAGGCGTTCACATATaGTTTTGCCAACAGTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: IFLSFFFPSDCLFRSFIFSGVHI*FCQQCR Trigger: CCTACACTGTTGGCAAAAGCATATGTGAACGCCTGA...GAAAATGAAACTTCTGAAGAGACAGTCCGAAGGGAAAAAGAAGCTGAGGAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTTGTGTCCTACCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGTTTGTATGGAACAGTTaGGGTTGTCAAAATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: HFVSYLTKRHYFSSVLSRFVWNS*GCQNDR Trigger: TCTGTCATTTTGACAACCCCAACTGTTCCATACAAA...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGTAGGACACAAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGCCCAAAACAACAGGTTCCAAATATTCTGTTACTTGGGACTTCTCAGGGAAGAACAGCTTTGTATaGAACAGTTGGGGTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: TVPKTTGSKYSVTWDFSGKNSFV*NSWGCQ Trigger: TTGACAACCCCAACTGTTCCATACAAAGCTGTTCTT...CCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTTGTTTTGGGCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTCAAAGAGTCAGCTCTAATCGCTGGTTaGAAACCTCCATATGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LNCLQELAYPEERDFKESALIAG*KPPYVK Trigger: TTTTACATATGGAGGTTTTCAACCAGCGATTAGAGC...TGACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
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| 3UTR-3UTR TCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAGCTCTAATCGCTGGTTaGAAACCTCCATATGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SAIIFPVYSVGVITVPKTALIAG*KPPYVK Trigger: TTTTACATATGGAGGTTTTCAACCAGCGATTAGAGC...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAAGGAAACTTCCCAGCAGAAGGACTCCTATGAAATGGAAGCTGATAAGCTCTTGCTCTAATCGCTaGTTGAAAACCTCCATATGT | + |
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Preference number: 2 (lower is better) Translates to: SKRKLPSRRTPMKWKLISSCSNR*LKTSIC Trigger: ACATATGGAGGTTTTCAACCAGCGATTAGAGCAAGA...GCTTATCAGCTTCCATTTCATAGGAGTCCTTCTGCTGGGAAGTTTCCTTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTCAAAGAGTCATCTTGCTCTAATCGCTaGTTGAAAACCTCCATATGT | + |
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Preference number: 2 (lower is better) Translates to: LNCLQELAYPEERDFKESSCSNR*LKTSIC Trigger: ACATATGGAGGTTTTCAACCAGCGATTAGAGCAAGA...TGACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGCCAAAGGCAGTATAAAAGGCTTCTTGCCATTAACACTCAACTCATATTGGAGCACATATTTCTaGGAGGACCTGTTCTTGACT | + |
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Preference number: 2 (lower is better) Translates to: TVAKGSIKGFLPLTLNSYWSTYF*EDLFLT Trigger: AGTCAAGAACAGGTCCTCCCAGAAATATGTGCTCCA...ATATGAGTTGAGTGTTAATGGCAAGAAGCCTTTTATACTGCCTTTGGCTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR-3UTR TCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACATTGGGGTTGTCAAAATaGCAGAAGCGTTATATTCTT | + |
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Preference number: 2 (lower is better) Translates to: SAIIFPVYSVGVITVPKTLGLSK*QKRYIL Trigger: AAGAATATAACGCTTCTGTCATTTTGACAACCCCAA...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAGAAGCGTTATATTCTTaGTCTAATCGCTGGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SAIIFPVYSVGVITVPKTEALYS*SNRWLK Trigger: TTTCAACCAGCGATTAGAGCAAGAATATAACGCTTC...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAAAATATTCTGTTACTTaGGACTTCTCAGGGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: SAIIFPVYSVGVITVPKTKYSVT*DFSGNC Trigger: ACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTT...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTATGATTCTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTCATATTTTTCTGAATTaGTCTTCGTGCCTGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PYDSELSSRACISRRERLHIFLN*SSCLTK Trigger: CTTTGTCAGGCACGAAGAGCAATTCAGAAAAATATG...AAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAGAATCATAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
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| 3UTR-3UTR CCA 90 bp | TATTGGATGGAGCACATATTTCTGGGAGGACCTGTTCTTGACTACAATATTGTTAAGAACAGCTTTGTATaGAACAGTTGGGGTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: YWMEHIFLGGPVLDYNIVKNSFV*NSWGCQ Trigger: TTGACAACCCCAACTGTTCCATACAAAGCTGTTCTT...AACAATATTGTAGTCAAGAACAGGTCCTCCCAGAAATATGTGCTCCATCCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| 3UTR-3UTR CCA 90 bp | TCACCATCATTTCCTTACCTTGCATATCCAGAAGAGAGAGACTTCAAAGAGTCAAAATATTCTGTTACTTaGGACTTCTCAGGGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: SPSFPYLAYPEERDFKESKYSVT*DFSGNC Trigger: ACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTT...TGACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGGTAAGGAAATGATGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCAACTCATATTTTTATTTGGCTAGGTTTCATGGATTCCCTTAAGATACACCAGAGAGTAACAGTCTaGAAAACCGTAAGTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HSTHIFIWLGFMDSLKIHQRVTV*KTVSPF Trigger: AAAAGGACTTACGGTTTTTCAGACTGTTACTCTCTG...GTGTATCTTAAGGGAATCCATGAAACCTAGCCAAATAAAAATATGAGTTGAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR CAA 90 bp | TTAACTCATAAAGCCACTGTAGCCAAAGGCAGTATAAAAGGCTTCTaGCCATTAACACTCAACTCATATTTTTATTTGGCTAGGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LTHKATVAKGSIKGF*PLTLNSYFYLARFH Trigger: ATGAAACCTAGCCAAATAAAAATATGAGTTGAGTGTTAATGGCAAGAAGCCTTTTATACTGCCTTTGGCTACAGTGGCTTTATGAGTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
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| 3UTR GCA 72 bp | GCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTaGCTGTACAAACTCCCAGCCACTTCTCCAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: AQARLGVTVSCC*LYKLPATSPAP Trigger: TGGTGCTGGAGAAGTGGCTGGGAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| 3UTR GCA 72 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTaGTGCCTGTACAAACTCCCAGCCACTTCTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YAQARLGVTVSC*CLYKLPATSPA Trigger: TGCTGGAGAAGTGGCTGGGAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR GCA 72 bp | TCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTaGTGCTGCCTGTACAAACTCCCAGCCACTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SYAQARLGVTVS*CCLYKLPATSP Trigger: TGGAGAAGTGGCTGGGAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR GCA 72 bp | CAGGAAGAAAGGGCACTGGGCTTTCCTGCACACCTCTaGAGTTTGAACACTAGTTTTGGTCAGGACCGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEERALGFPAHL*SLNTSFGQDRK Trigger: CTTTCGGTCCTGACCAAAACTAGTGTTCAAACTGCAGAGGTGTGCAGGAAAGCCCAGTGCCCTTTCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR TCA 72 bp | AAAGGGCACTGGGCTTTCCTGCACACCTCTGCAGTTTaGACACTAGTTTTGGTCAGGACCGAAAGGCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: KGHWAFLHTSAV*TLVLVRTERHV Trigger: TACATGCCTTTCGGTCCTGACCAAAACTAGTGTTCAAACTGCAGAGGTGTGCAGGAAAGCCCAGTGCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR GCA 72 bp | CTCCAGCCAGCACCCAGGGCCAGACTACTATCCCGATaGACTGTTACACTTGAGTCATTTAAGGTCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQPAPRARLLSR*TVTLESFKVSF Trigger: AAAACTGACCTTAAATGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCTGGCCCTGGGTGCTGGCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR CCA 72 bp | CAAAGACTCATGTGTGAATGCTTGGCCCACAGGGAATaGTACTATCAGGGGGAATGGCACTGTGTCCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: QRLMCECLAHRE*YYQGEWHCVPI Trigger: TATAGGGACACAGTGCCATTCCCCCTGATAGTACCATTCCCTGTGGGCCAAGCATTCACACATGAGTCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR GCA 72 bp | CAGAAGGACTCCTATGAAATGGAAGCTGATAAGCGTTaGTCCAGAGGACTGAATCCCACTTTGTGTCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: QKDSYEMEADKR*SRGLNPTLCPT Trigger: GGTAGGACACAAAGTGGGATTCAGTCCTCTGGAGCAACGCTTATCAGCTTCCATTTCATAGGAGTCCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| 3UTR GCA 72 bp | TGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTaGCACCACCGCCCAAATTATATTCACTTTCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLCLPSAGIKGV*HHRPNYIHFQV Trigger: TACTTGAAAGTGAATATAATTTGGGCGGTGGTGGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGCTCCCAACAGCAGCTTGAATTGCTATCTCATACAGTTGTCTGGGAAGAGGCTGTGAGTTTTCTGTaGCCAGTGACAACCCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LCSQQQLELLSHTVVWEEAVSFL*PVTTHV Trigger: TACATGGGTTGTCACTGGCAACAGAAAACTCACAGC...CTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR TCA 72 bp | TGCTCCAGAGGACTGAATCCCACTTTGTGTCCTACCTaGCAAAGCGCCATTATTTTTCCAGTGTACTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CSRGLNPTLCPT*QSAIIFPVYSV Trigger: GACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGTAGGACACAAAGTGGGATTCAGTCCTCTGGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| 3UTR GCA 72 bp | GTTGTCTGGGAAGAGACTCCTTCAGGCGTTCACATATaGTTTTGCCAACAGTGTAGGCTTTCTCTCTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVWEETPSGVHI*FCQQCRLSLYG Trigger: TCCATAGAGAGAAAGCCTACACTGTTGGCAAAAGCATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGCAAATATTCTGTTACTaGGGACTTCTCAGGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: NCSSCLTKRHYFSSVLSRQIFCY*GLLREL Trigger: CAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTG...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR TCA 72 bp | AGGAACTATATTAAAGGGTGGCATCATTGGGAAGGTTaGGAACCACTGAAGCAGGTCATAGTTGAAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RNYIKGWHHWEG*EPLKQVIVEDP Trigger: AGGGTCTTCAACTATGACCTGCTTCAGTGGTTCTCAACCTTCCCAATGATGCCACCCTTTAATATAGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR CCA 72 bp | GTGCCCAAAACAACAGGTTCCAAATATTCTGTTACTTaGGACTTCTCAGGGAACTGTGCAGGGTTGATGATT | + |
|
Preference number: 3 (lower is better) Translates to: VPKTTGSKYSVT*DFSGNCAGLMI Trigger: AATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTTGTTTTGGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR CCA 72 bp | CAACAGCAGCTTGAATTGCTATCTCATACAGTTGTCTaGGAAGAGACTCCTTCAGGCGTTCACATATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QQQLELLSHTVV*EETPSGVHICF Trigger: AAAGCATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTTGTGTCCTACCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGCTCTAATCGCTGGTaGAAAACCTCCATATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HFVSYLTKRHYFSSVLSRCSNRW*KTSICK Trigger: TTTACATATGGAGGTTTTCAACCAGCGATTAGAGCA...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGTAGGACACAAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAGAGGAAAGAACAGCTTaGTATGGAACAGTTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SAIIFPVYSVGVITVPKTEERTA*YGTVGV Trigger: AACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTC...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR TCA 72 bp | GTTTCTCTTGCAATAACTTTGCTCCCAACAGCAGCTTaGATTGCTATCTCATACAGTTGTCTGGGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VSLAITLLPTAA*IAISYSCLGRD Trigger: GTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAGTTATTGCAAGAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGAATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCTGCTCTAATCGCTGGTaGAAAACCTCCATATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLNCSSCLTKRHYFSSVLCSNRW*KTSICK Trigger: TTTACATATGGAGGTTTTCAACCAGCGATTAGAGCA...GAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATTCAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACATGCTCTAATCGCTGGTaGAAAACCTCCATATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SAIIFPVYSVGVITVPKTCSNRW*KTSICK Trigger: TTTACATATGGAGGTTTTCAACCAGCGATTAGAGCA...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTGGATGGAGCACATATTTCTGGGAGGACCTGTTCTTGACTACAATATTGTTGAGGAAAGAACAGCTTaGTATGGAACAGTTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YWMEHIFLGGPVLDYNIVEERTA*YGTVGV Trigger: AACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTC...AACAATATTGTAGTCAAGAACAGGTCCTCCCAGAAATATGTGCTCCATCCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTCCTCAGCTTCTTTTTCCCTTCGGACTGTCTCTTCAGAAGTTTCATTTTCCAACAGCAGCTTGAATaGCTATCTCATACAGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IFLSFFFPSDCLFRSFIFQQQLE*LSHTVV Trigger: GACAACTGTATGAGATAGCAATTCAAGCTGCTGTTG...GAAAATGAAACTTCTGAAGAGACAGTCCGAAGGGAAAAAGAAGCTGAGGAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR GCA 72 bp | CAAATATTCTGTTACTTGGGACTTCTCAGGGAACTGTaGAGGGTTGATGATTGTGATCTCCTTCTCTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: QIFCYLGLLREL*RVDDCDLLLFI Trigger: TATAAAGAGAAGGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR GCA 72 bp | TTTGAGATGTTCGTGATCACCATCATTTCCTTACCTTaGATATCCAGAAGAGAGAGACTTCAAAGAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: FEMFVITIISLP*ISRRERLQRVI Trigger: TATGACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGGTAAGGAAATGATGGTGATCACGAACATCTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR CCA 72 bp | TTTTGCAGAGGAAAGAACAGCTTTGTATGGAACAGTTaGGGTTGTCAAAATGACAGAAGCGTTATATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FCRGKNSFVWNS*GCQNDRSVIFL Trigger: CAAGAATATAACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTCTGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR CCA 72 bp | GTTTCATGGATTCCCTTAAGATACACAGATTTTTATTaGATGGAGCACATATTTCTGGGAGGACCTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSWIPLRYTDFY*MEHIFLGGPVL Trigger: AAGAACAGGTCCTCCCAGAAATATGTGCTCCATCCAATAAAAATCTGTGTATCTTAAGGGAATCCATGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTAGCCAAAGGCAGTATAAAAGGCTTCTTGCCATTAACACTCAACTCATATTCATATTTTTCTGAATaGCTCTTCGTGCCTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVAKGSIKGFLPLTLNSYSYFSE*LFVPDK Trigger: TTTGTCAGGCACGAAGAGCAATTCAGAAAAATATGA...ATATGAGTTGAGTGTTAATGGCAAGAAGCCTTTTATACTGCCTTTGGCTACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR GCA 72 bp | ATTTCCATTCAGCAGAATATCCATTTTAACGAGTTCTaGAGTCTGGTAACCGGCATCTTCATAATCAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: ISIQQNIHFNEF*SLVTGIFIIKT Trigger: AGTTTTGATTATGAAGATGCCGGTTACCAGACTGCAGAACTCGTTAAAATGGATATTCTGCTGAATGGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGACCTGTTCTTGACTACAATATTGTTAAGTGCAGAACATATTTAGCATTCTCATATTTTTCTGAATaGCTCTTCGTGCCTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGPVLDYNIVKCRTYLAFSYFSE*LFVPDK Trigger: TTTGTCAGGCACGAAGAGCAATTCAGAAAAATATGA...GAATGCTAAATATGTTCTGCACTTAACAATATTGTAGTCAAGAACAGGTCCTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR TCA 72 bp | ATTACAATCAGCATTTTCAAACCTTTGAGATGTTCGTaGTCACCATCATTTCCTTACCTTGCATATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ITISIFKPLRCS*SPSFPYLAYPE Trigger: TTCTGGATATGCAAGGTAAGGAAATGATGGTGATCACGAACATCTCAAAGGTTTGAAAATGCTGATTGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAACCTCCAGCCAGCACCCAGGGCCAGACTACTATCCCGATGCACTGTTACCACTCCATCAAACAGTaGTATATTGGCTATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQPPASTQGQTTIPMHCYHSIKQ*YIGYHP Trigger: GGGGTGATAGCCAATATAGCACTGTTTGATGGAGTG...GTAACAGTGCATCGGGATAGTAGTCTGGCCCTGGGTGCTGGCTGGAGGTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACCACCATTGGTTTCGCTaGTTTAAACCCAGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSYAQARLGVTVSCCCLYHHWFR*FKPRQG Trigger: CCCTTGCCTGGGTTTAAATCAGCGAAACCAATGGTG...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCAACAGAGAGGCTGTCTaGGCCTTCACAGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRNREAV*AFTVIP Trigger: AGGAATCACTGTGAAGGCGCAGACAGCCTCTCTGTT...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | CCCCAACCTCCAGCCAGCACCCAGGGCCAGACTACTATCCCGATGCACTGTTACTTCACGATGGACTTTTaGAGGAGGTATTCGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQPPASTQGQTTIPMHCYFTMDF*RRYSFN Trigger: ATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAA...GTAACAGTGCATCGGGATAGTAGTCTGGCCCTGGGTGCTGGCTGGAGGTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCTTGGCATGCAGACAGTaGCCTGGACACTTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRLACRQ*PGHFIT Trigger: AGTTATGAAGTGTCCAGGTCACTGTCTGCATGCCAA...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCGAGGTATTCGTTCAATaGCTGCCTGAAGCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGREVFVQ*LPEAHC Trigger: ACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTC...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR CAA 72 bp | AGCAGAAATGGTCCCCAAAGACTCATGTGTGAATGCTaGGCCCACAGGGAATGGTACTATCAGGGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNGPQRLMCEC*AHREWYYQGEW Trigger: CCATTCCCCCTGATAGTACCATTCCCTGTGGGCCAAGCATTCACACATGAGTCTTTGGGGACCATTTCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR CAA 72 bp | GAAAGGGCACTGGGCTTTCCTGCACACCTCTGCAGTTaGAACACTAGTTTTGGTCAGGACCGAAAGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ERALGFPAHLCS*NTSFGQDRKAC Trigger: ACATGCCTTTCGGTCCTGACCAAAACTAGTGTTCAAACTGCAGAGGTGTGCAGGAAAGCCCAGTGCCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | ACAACCCATGTAGCTAGTGCACTGAGAACAGCAGGAAGAAAGGGCACTGGGCTTTCTGCGCCTTCACAGTaGTTCCTCTTTCTCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TTHVASALRTAGRKGTGLSAPSQ*FLFLVL Trigger: TAGAACGAGAAAGAGGAATCACTGTGAAGGCGCAGA...AAGCCCAGTGCCCTTTCTTCCTGCTGTTCTCAGTGCACTAGCTACATGGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACCAGCTAAAGTGCTTTTaGCATGATCCACATGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSYAQARLGVTVSCCCLYQLKCF*HDPHVQ Trigger: TTGCACATGTGGATCATGGCAAAAGCACTTTAGCTG...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAGCAGAAGGACTCCTATGAAATGGAAGCTGATAAGCGTTGCTCCAGAGAACAGAGAGGCTGTCTaGGCCTTCACAGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSRRTPMKWKLISVAPENREAV*AFTVIP Trigger: AGGAATCACTGTGAAGGCGCAGACAGCCTCTCTGTT...CTCTGGAGCAACGCTTATCAGCTTCCATTTCATAGGAGTCCTTCTGCTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR GCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCTCAGGCGTTCACATATaGTTTTGCCAACAGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRSGVHI*FCQQCR Trigger: CCTACACTGTTGGCAAAAGCATATGTGAACGCCTGA...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCACCAGTAAAACACCTTaGCATGCAGACAGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLTSKTP*HADSDL Trigger: CAGGTCACTGTCTGCATGCCAAGGTGTTTTACTGGT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACCAAACAGTGCTATATTaGCTATCACCCCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VSYAQARLGVTVSCCCLYQTVLY*LSPLCT Trigger: AGTACAGAGGGGTGATAGCCAATATAGCACTGTTTG...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCCTATTTGTGCTTCAGTaGCATCTTTCATCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRLFVLQ*HLSSQQ Trigger: TTGCTGGGATGAAAGATGTCACTGAAGCACAAATAG...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | GTTGTCTGGGAAGAGACTCCTTCAGGCGTTCACATATGCTTTTGCCAACAGTGTAACAGAGAGGCTGTCTaGGCCTTCACAGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVWEETPSGVHICFCQQCNREAV*AFTVIP Trigger: AGGAATCACTGTGAAGGCGCAGACAGCCTCTCTGTT...ACACTGTTGGCAAAAGCATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCCACTCCATCAAACAGTaGTATATTGGCTATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLHSIKQ*YIGYHP Trigger: GGGGTGATAGCCAATATAGCACTGTTTGATGGAGTG...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACTTGGAATCTCAATGTTaGCAATCTTCCTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSYAQARLGVTVSCCCLYLESQC*QSSSAS Trigger: AGAAGCTGAGGAAGATTGGCAACATTGAGATTCCAA...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACTTCACGATGGACTTTTaGAGGAGGTATTCGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSYAQARLGVTVSCCCLYFTMDF*RRYSFN Trigger: ATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAA...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLITPLY*SKVESN Trigger: ATTTGACTCCACCTTTGACCAGTACAGAGGGGTGAT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCACCATTGGTTTCGCTaGTTTAAACCCAGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEHHWFR*FKPRQG Trigger: CCCTTGCCTGGGTTTAAATCAGCGAAACCAATGGTG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | AAACCTCCATATGTAAAAGTCCAAGAAACCCCAACCTCCAGCCAGCACCCAGGGCAGCTAAAGTGCTTTTaGCATGATCCACATGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPPYVKVQETPTSSQHPGQLKCF*HDPHVQ Trigger: TTGCACATGTGGATCATGGCAAAAGCACTTTAGCTG...CCCTGGGTGCTGGCTGGAGGTTGGGGTTTCTTGGACTTTTACATATGGAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | AATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGAACAGAGAGGCTGTCTaGGCCTTCACAGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NCSSCLTKRHYFSSVLSRNREAV*AFTVIP Trigger: AGGAATCACTGTGAAGGCGCAGACAGCCTCTCTGTT...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAACAGAGAGGCTGTCTaGGCCTTCACAGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALENREAV*AFTVIP Trigger: AGGAATCACTGTGAAGGCGCAGACAGCCTCTCTGTT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACGAAGCGTTATATTCTTaGTCTAATCGCTGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSYAQARLGVTVSCCCLYEALYS*SNRWLK Trigger: TTTCAACCAGCGATTAGAGCAAGAATATAACGCTTC...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCAGACTACTATCCCGATaGACTGTTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLRLLSR*TVTLES Trigger: TGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCAGTGGGTTTTCACGATaGACTTTTGGAGGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLSGFSR*TFGGGI Trigger: AATACCTCCTCCAAAAGTCCATCGTGAAAACCCACT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCAAAGTGCTTTTGCCATaGTCCACATGTGCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLKVLLP*STCAMI Trigger: TATCATTGCACATGTGGATCATGGCAAAAGCACTTT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTCTGCGCCTTCACAGTaGTTCCTCTTTCTCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALESAPSQ*FLFLVL Trigger: TAGAACGAGAAAGAGGAATCACTGTGAAGGCGCAGA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTGGCATGCAGACAGTaGCCTGGACACTTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALELACRQ*PGHFIT Trigger: AGTTATGAAGTGTCCAGGTCACTGTCTGCATGCCAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGAGGTATTCGTTCAATaGCTGCCTGAAGCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEEVFVQ*LPEAHC Trigger: ACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCTTGGGGTTGTCAAAATaGCAGAAGCGTTATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRLGLSK*QKRYIL Trigger: AAGAATATAACGCTTCTGTCATTTTGACAACCCCAA...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCGCCATGATCCACATGTaGAATGATACTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRAMIHM*NDTEIS Trigger: AGAAATTTCAGTATCATTGCACATGTGGATCATGGC...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | AAACCTCCATATGTAAAAGTCCAAGAAACCCCAACCTCCAGCCAGCACCCAGGGAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPPYVKVQETPTSSQHPGNTFSI*FPTLSG Trigger: CCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATT...CCCTGGGTGCTGGCTGGAGGTTGGGGTTTCTTGGACTTTTACATATGGAGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCTTTCACTGTTTCTCTTaGAATAACTTTGCTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRFHCFS*NNFAPN Trigger: GTTGGGAGCAAAGTTATTGCAAGAGAAACAGTGAAA...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGACCAGTAAAACACCTTaGCATGCAGACAGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALETSKTP*HADSDL Trigger: CAGGTCACTGTCTGCATGCCAAGGTGTTTTACTGGT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCTCTTGCTCTAATCGCTaGTTGAAAACCTCCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLSCSNR*LKTSIC Trigger: ACATATGGAGGTTTTCAACCAGCGATTAGAGCAAGA...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTCTCATACAGTTGTCTaGGAAGAGACTCCTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALESHTVV*EETPSG Trigger: GCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| 3UTR CAA 72 bp | GCTCCCAACAGCAGCTTGAATTGCTATCTCATACAGTaGTCTGGGAAGAGACTCCTTCAGGCGTTCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: APNSSLNCYLIQ*SGKRLLQAFTY Trigger: ATATGTGAACGCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCCCAAAACAACAGGTTCCAAATATTCTGTTACTTGGGACTTCTCAGGGGAGGTATTCGTTCAATaGCTGCCTGAAGCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVPKTTGSKYSVTWDFSGEVFVQ*LPEAHC Trigger: ACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTC...CCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTTGTTTTGGGCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCTCCCAACAGCAGCTTaGATTGCTATCTCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALELPTAA*IAISYS Trigger: ACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCCCTGCATATAATTTATaGGTTGGCTGTTCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLPAYNL*VGCSLG Trigger: TCCTAATGAACAGCCAACTCATAAATTATATGCAGG...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGCCTGTCAGCTAAAGTaGTTTTGCCATGATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEACQLK*FCHDPH Trigger: ATGTGGATCATGGCAAAAGCACTTTAGCTGACAGGC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCACTCCATCAAACAGTaGTATATTGGCTATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEHSIKQ*YIGYHP Trigger: GGGGTGATAGCCAATATAGCACTGTTTGATGGAGTG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTCAGGCGTTCACATATaGTTTTGCCAACAGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALESGVHI*FCQQCR Trigger: CCTACACTGTTGGCAAAAGCATATGTGAACGCCTGA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEITPLY*SKVESN Trigger: ATTTGACTCCACCTTTGACCAGTACAGAGGGGTGAT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCAAATATTCTGTTACTTaGGACTTCTCAGGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YAQARLGVTVSCCCLYKLKYSVT*DFSGNC Trigger: ACAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR CAA 72 bp | ACTAGCTCTAGTTTAAAGGTCGCTGTGAGTTTTCTGTaGCCAGTGACAACCCATGTAGCTAGTGCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSSLKVAVSFL*PVTTHVASALR Trigger: TCTCAGTGCACTAGCTACATGGGTTGTCACTGGCAACAGAAAACTCACAGCGACCTTTAAACTAGAGCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACATCTGCGCCTTCACAGTaGTTCCTCTTTCTCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SAIIFPVYSVGVITVPKTSAPSQ*FLFLVL Trigger: TAGAACGAGAAAGAGGAATCACTGTGAAGGCGCAGA...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAGGTGTGTGCCACCACCGCCCAAATTATATTCACTTTCAAGTACACATTGGCATGCAGACAGTaGCCTGGACACTTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: GLKVCATTAQIIFTFKYTLACRQ*PGHFIT Trigger: AGTTATGAAGTGTCCAGGTCACTGTCTGCATGCCAA...TGTGTACTTGAAAGTGAATATAATTTGGGCGGTGGTGGCACACACCTTTAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGATAACTGGAATTACTaGCAGCTGTGCTTCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEDNWNY*QLCFKS Trigger: GCTTTTGAAGCACAGCTGTCAGTAATTCCAGTTATC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAGGTGTGTGCCACCACCGCCCAAATTATATTCACTTTCAAGTACACAGAGGTATTCGTTCAATaGCTGCCTGAAGCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKVCATTAQIIFTFKYTEVFVQ*LPEAHC Trigger: ACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTC...TGTGTACTTGAAAGTGAATATAATTTGGGCGGTGGTGGCACACACCTTTAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR TCA 90 bp | CGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAACGAGGTATTCGTTCAATaGCTGCCTGAAGCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHYFSSVLSRCNNSAQNNEVFVQ*LPEAHC Trigger: ACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTC...GTTGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCTATTTGTGCTTCAGTaGCATCTTTCATCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALELFVLQ*HLSSQQ Trigger: TTGCTGGGATGAAAGATGTCACTGAAGCACAAATAG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | GTTACTTGGGACTTCTCAGGGAACTGTGCAGGGTTGATGATTGTGATCTCCTTCGGTACACTCAATTTATaGGTTGGCTGTTCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTWDFSGNCAGLMIVISFGTLNL*VGCSLG Trigger: TCCTAATGAACAGCCAACTCATAAATTGAGTGTACC...GAAGGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCAGCTAAAGTGCTTTTaGCATGATCCACATGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEQLKCF*HDPHVQ Trigger: TTGCACATGTGGATCATGGCAAAAGCACTTTAGCTG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | TACTTGGGACTTCTCAGGGAACTGTGCAGGGTTGATGATTGTGATCTCCTTCTCAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLGLLRELCRVDDCDLLLNTFSI*FPTLSG Trigger: CCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATT...GAGAAGGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAGACTACTATCCCGATaGACTGTTACACTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALERLLSR*TVTLES Trigger: TGACTCAAGTGTAACAGTGCATCGGGATAGTAGTCT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CACTTTGTGTCCTACCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGAGTGGGTTTTCACGATaGACTTTTGGAGGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HFVSYLTKRHYFSSVLSRSGFSR*TFGGGI Trigger: AATACCTCCTCCAAAAGTCCATCGTGAAAACCCACT...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGTAGGACACAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR CCA 90 bp | AATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCAGTCGGAGTGGGTTTTCACGATaGACTTTTGGAGGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NCSSCLTKRHYFSSVLSRSGFSR*TFGGGI Trigger: AATACCTCCTCCAAAAGTCCATCGTGAAAACCCACT...CCGACTGAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAGTGGGTTTTCACGATaGACTTTTGGAGGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALESGFSR*TFGGGI Trigger: AATACCTCCTCCAAAAGTCCATCGTGAAAACCCACT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCAAACAGTGCTATATTaGCTATCACCCCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEQTVLY*LSPLCT Trigger: AGTACAGAGGGGTGATAGCCAATATAGCACTGTTTG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| 3UTR CAA 72 bp | GCTCCTTTTAGCATCTGTAAGAAAGCCCGCACCAAGTaGAAGACAGTAGCAAATGGCTGTAAAATCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: APFSICKKARTK*KTVANGCKIPT Trigger: TGTTGGGATTTTACAGCCATTTGCTACTGTCTTCAACTTGGTGCGGGCTTTCTTACAGATGCTAAAAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAAAGTGCTTTTGCCATaGTCCACATGTGCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEKVLLP*STCAMI Trigger: TATCATTGCACATGTGGATCATGGCAAAAGCACTTT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | CCTTATGATTCTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTTCTGCGCCTTCACAGTaGTTCCTCTTTCTCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PYDSELSSRACISRRERLSAPSQ*FLFLVL Trigger: TAGAACGAGAAAGAGGAATCACTGTGAAGGCGCAGA...AAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAGAATCATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGCTCTAATCGCTGGTTaGAAACCTCCATATGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEALIAG*KPPYVK Trigger: TTTTACATATGGAGGTTTTCAACCAGCGATTAGAGC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAACGCCTGTCAGCTAAAGTaGTTTTGCCATGATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RHYFSSVLSRCNNSAQNNACQLK*FCHDPH Trigger: ATGTGGATCATGGCAAAAGCACTTTAGCTGACAGGC...GTTGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTGCCTGTCAGCTAAAGTaGTTTTGCCATGATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GKNSFVWNSWGCQNDRSVACQLK*FCHDPH Trigger: ATGTGGATCATGGCAAAAGCACTTTAGCTGACAGGC...AACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALENTFSI*FPTLSG Trigger: CCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAACCACTCCATCAAACAGTaGTATATTGGCTATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHYFSSVLSRCNNSAQNNHSIKQ*YIGYHP Trigger: GGGGTGATAGCCAATATAGCACTGTTTGATGGAGTG...GTTGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCCAAAGACTCATGTGTGAATGCTTGGCCCACAGGGAATGGTACTATCATATTTTTCTGAATTaGTCTTCGTGCCTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGPQRLMCECLAHREWYYHIFLN*SSCLTK Trigger: CTTTGTCAGGCACGAAGAGCAATTCAGAAAAATATG...ATAGTACCATTCCCTGTGGGCCAAGCATTCACACATGAGTCTTTGGGGACCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCCAAAGACTCATGTGTGAATGCTTGGCCCACAGGGAATGGTACTATAACAGCAGCTTGAATTaGTATCTCATACAGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGPQRLMCECLAHREWYYNSSLN*YLIQLS Trigger: AGACAACTGTATGAGATAGCAATTCAAGCTGCTGTT...ATAGTACCATTCCCTGTGGGCCAAGCATTCACACATGAGTCTTTGGGGACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTGGAATCTCAATGTTaGCAATCTTCCTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALELESQC*QSSSAS Trigger: AGAAGCTGAGGAAGATTGGCAACATTGAGATTCCAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CCTTATGATTCTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTACCAGTAAAACACCTTaGCATGCAGACAGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYDSELSSRACISRRERLTSKTP*HADSDL Trigger: CAGGTCACTGTCTGCATGCCAAGGTGTTTTACTGGT...AAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAGAATCATAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCTCAGCTTCTTTTTCCCTTCGGACTGTCTCTTCAGAAGTTTCATTTTCACCAGTAAAACACCTTaGCATGCAGACAGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLSFFFPSDCLFRSFIFTSKTP*HADSDL Trigger: CAGGTCACTGTCTGCATGCCAAGGTGTTTTACTGGT...GAAAATGAAACTTCTGAAGAGACAGTCCGAAGGGAAAAAGAAGCTGAGGAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTCACGATGGACTTTTaGAGGAGGTATTCGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEFTMDF*RRYSFN Trigger: ATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTACCAAAGCTTTCAGTaGGTTTTCACGATGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEYQSFQ*VFTMDF Trigger: AAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | GGATTAAAGGTGTGTGCCACCACCGCCCAAATTATATTCACTTTCAAGTACACAATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKVCATTAQIIFTFKYTITPLY*SKVESN Trigger: ATTTGACTCCACCTTTGACCAGTACAGAGGGGTGAT...TGTGTACTTGAAAGTGAATATAATTTGGGCGGTGGTGGCACACACCTTTAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLNCSSCLTKRHYFSSVLITPLY*SKVESN Trigger: ATTTGACTCCACCTTTGACCAGTACAGAGGGGTGAT...GAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATTCAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTCTTGCTCTAATCGCTaGTTGAAAACCTCCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALESCSNR*LKTSIC Trigger: ACATATGGAGGTTTTCAACCAGCGATTAGAGCAAGA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAAGAACAGCTTTGTATaGAACAGTTGGGGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEKNSFV*NSWGCQ Trigger: TTGACAACCCCAACTGTTCCATACAAAGCTGTTCTT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCCCAAAACAACAGGTTCCAAATATTCTGTTACTTGGGACTTCTCAGGGAAAGTGCTTTTGCCATaGTCCACATGTGCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: TVPKTTGSKYSVTWDFSGKVLLP*STCAMI Trigger: TATCATTGCACATGTGGATCATGGCAAAAGCACTTT...CCCTGAGAAGTCCCAAGTAACAGAATATTTGGAACCTGTTGTTTTGGGCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | CGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAACGATAACTGGAATTACTaGCAGCTGTGCTTCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHYFSSVLSRCNNSAQNNDNWNY*QLCFKS Trigger: GCTTTTGAAGCACAGCTGTCAGTAATTCCAGTTATC...GTTGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTGATAACTGGAATTACTaGCAGCTGTGCTTCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKNSFVWNSWGCQNDRSVDNWNY*QLCFKS Trigger: GCTTTTGAAGCACAGCTGTCAGTAATTCCAGTTATC...AACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTGGGGTTGTCAAAATaGCAGAAGCGTTATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALELGLSK*QKRYIL Trigger: AAGAATATAACGCTTCTGTCATTTTGACAACCCCAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR TCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCCTGCATATAATTTATaGGTTGGCTGTTCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEPAYNL*VGCSLG Trigger: TCCTAATGAACAGCCAACTCATAAATTATATGCAGG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGCCATGATCCACATGTaGAATGATACTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEAMIHM*NDTEIS Trigger: AGAAATTTCAGTATCATTGCACATGTGGATCATGGC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGACAGCTAAAGTGCTTTTaGCATGATCCACATGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRGKNSFVWNSWGCQNDRQLKCF*HDPHVQ Trigger: TTGCACATGTGGATCATGGCAAAAGCACTTTAGCTG...TCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGAAGCGTTATATTCTTaGTCTAATCGCTGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEEALYS*SNRWLK Trigger: TTTCAACCAGCGATTAGAGCAAGAATATAACGCTTC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGAACAGCAGCTTGAATTaGTATCTCATACAGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALENSSLN*YLIQLS Trigger: AGACAACTGTATGAGATAGCAATTCAAGCTGCTGTT...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTTCACTGTTTCTCTTaGAATAACTTTGCTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEFHCFS*NNFAPN Trigger: GTTGGGAGCAAAGTTATTGCAAGAGAAACAGTGAAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR GCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTGTGTCTCCTATTTGTaGTTCAGTGACATCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALECVSYL*FSDIFH Trigger: ATGAAAGATGTCACTGAAGCACAAATAGGAGACACA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTATATACCAGTAAAACACCTTaGCATGCAGACAGTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTALYGTVGVVKMTEALYTSKTP*HADSDL Trigger: CAGGTCACTGTCTGCATGCCAAGGTGTTTTACTGGT...ATATAACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAACAGTGGGTTTTCACGATaGACTTTTGGAGGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RHYFSSVLSRCNNSAQNNSGFSR*TFGGGI Trigger: AATACCTCCTCCAAAAGTCCATCGTGAAAACCCACT...GTTGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | GGATTAAAGGTGTGTGCCACCACCGCCCAAATTATATTCACTTTCAAGTACACACAAACAGTGCTATATTaGCTATCACCCCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GLKVCATTAQIIFTFKYTQTVLY*LSPLCT Trigger: AGTACAGAGGGGTGATAGCCAATATAGCACTGTTTG...TGTGTACTTGAAAGTGAATATAATTTGGGCGGTGGTGGCACACACCTTTAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCCAAACAGTGCTATATTaGCTATCACCCCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FLNCSSCLTKRHYFSSVLQTVLY*LSPLCT Trigger: AGTACAGAGGGGTGATAGCCAATATAGCACTGTTTG...GAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATTCAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCAATTTTATCTCCCTTaGAAACCACTCCATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEQFYLP*KPLHQT Trigger: TGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTTGTATGGAACAGTTaGGGTTGTCAAAATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVTINEKEQRTPAALEFVWNS*GCQNDR Trigger: TCTGTCATTTTGACAACCCCAACTGTTCCATACAAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| 3UTR CAA 72 bp | TGTTTCTCTTGCAATAACTTTGCTCCCAACAGCAGCTaGAATTGCTATCTCATACAGTTGTCTGGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFSCNNFAPNSS*NCYLIQLSGKR Trigger: TCTCTTCCCAGACAACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGCAAAGTTATTGCAAGAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTAAAGTGCTTTTGCCATaGTCCACATGTGCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: GKNSFVWNSWGCQNDRSVKVLLP*STCAMI Trigger: TATCATTGCACATGTGGATCATGGCAAAAGCACTTT...AACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACAAAAGTGCTTTTGCCATaGTCCACATGTGCAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: SAIIFPVYSVGVITVPKTKVLLP*STCAMI Trigger: TATCATTGCACATGTGGATCATGGCAAAAGCACTTT...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAATCTGCGCCTTCACAGTaGTTCCTCTTTCTCGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKSAPSQ*FLFLVL Trigger: TAGAACGAGAAAGAGGAATCACTGTGAAGGCGCAGA...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | TCTGAACTGTCTTCAAGAGCTTGCATATCCAGAAGAGAGAGACTTCAAAGAGTCGGTACACTCAATTTATaGGTTGGCTGTTCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SELSSRACISRRERLQRVGTLNL*VGCSLG Trigger: TCCTAATGAACAGCCAACTCATAAATTGAGTGTACC...GACTCTTTGAAGTCTCTCTCTTCTGGATATGCAAGCTCTTGAAGACAGTTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144363.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTGGTACACTCAATTTATaGGTTGGCTGTTCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKNSFVWNSWGCQNDRSVGTLNL*VGCSLG Trigger: TCCTAATGAACAGCCAACTCATAAATTGAGTGTACC...AACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRGKNSFVWNSWGCQNDRNTFSI*FPTLSG Trigger: CCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATT...TCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTCTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGATTCACGATGGACTTTTaGAGGAGGTATTCGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CRGKNSFVWNSWGCQNDRFTMDF*RRYSFN Trigger: ATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAA...TCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACATACCAAAGCTTTCAGTaGGTTTTCACGATGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAIIFPVYSVGVITVPKTYQSFQ*VFTMDF Trigger: AAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTA...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAATTGCTCTTCGTGCCTGACAAAGCGCCATTATTTTTCCAGTGTACTCTACCAAAGCTTTCAGTaGGTTTTCACGATGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLNCSSCLTKRHYFSSVLYQSFQ*VFTMDF Trigger: AAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTA...GAGTACACTGGAAAAATAATGGCGCTTTGTCAGGCACGAAGAGCAATTCAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTATATATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTALYGTVGVVKMTEALYITPLY*SKVESN Trigger: ATTTGACTCCACCTTTGACCAGTACAGAGGGGTGAT...ATATAACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAATCTCATACAGTTGTCTaGGAAGAGACTCCTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKSHTVV*EETPSG Trigger: GCCTGAAGGAGTCTCTTCCCAGACAACTGTATGAGA...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR TCA 90 bp | TATTTCTGGGAGGACCTGTTCTTGACTACAATATTGTTAAGTGCAGAACATATTTTGGCATGCAGACAGTaGCCTGGACACTTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: YFWEDLFLTTILLSAEHILACRQ*PGHFIT Trigger: AGTTATGAAGTGTCCAGGTCACTGTCTGCATGCCAA...AATATGTTCTGCACTTAACAATATTGTAGTCAAGAACAGGTCCTCCCAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | CACTCAACTCATATTTTTATTTGGCTAGGTTTCATGGATTCCCTTAAGATACACTTGGCATGCAGACAGTaGCCTGGACACTTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: HSTHIFIWLGFMDSLKIHLACRQ*PGHFIT Trigger: AGTTATGAAGTGTCCAGGTCACTGTCTGCATGCCAA...GTGTATCTTAAGGGAATCCATGAAACCTAGCCAAATAAAAATATGAGTTGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAACTCCCAACAGCAGCTTaGATTGCTATCTCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKLPTAA*IAISYS Trigger: ACTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAG...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | AGTAAAAGGAAACTTCCCAGCAGAAGGACTCCTATGAAATGGAAGCTGATAAGCGCCATGATCCACATGTaGAATGATACTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKRKLPSRRTPMKWKLISAMIHM*NDTEIS Trigger: AGAAATTTCAGTATCATTGCACATGTGGATCATGGC...GCTTATCAGCTTCCATTTCATAGGAGTCCTTCTGCTGGGAAGTTTCCTTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132169.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTGCCATGATCCACATGTaGAATGATACTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKNSFVWNSWGCQNDRSVAMIHM*NDTEIS Trigger: AGAAATTTCAGTATCATTGCACATGTGGATCATGGC...AACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAAGCCTGTCAGCTAAAGTaGTTTTGCCATGATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKACQLK*FCHDPH Trigger: ATGTGGATCATGGCAAAAGCACTTTAGCTGACAGGC...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | TATTGGATGGAGCACATATTTCTGGGAGGACCTGTTCTTGACTACAATATTGTTCAAACAGTGCTATATTaGCTATCACCCCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YWMEHIFLGGPVLDYNIVQTVLY*LSPLCT Trigger: AGTACAGAGGGGTGATAGCCAATATAGCACTGTTTG...AACAATATTGTAGTCAAGAACAGGTCCTCCCAGAAATATGTGCTCCATCCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGGAAAGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGACAATTTTATCTCCCTTaGAAACCACTCCATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CRGKNSFVWNSWGCQNDRQFYLP*KPLHQT Trigger: TGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTG...TCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | AGCGCCATTATTTTTCCAGTGTACTCAGTCGGTGTAATAACAGTGCCCAAAACACAATTTTATCTCCCTTaGAAACCACTCCATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SAIIFPVYSVGVITVPKTQFYLP*KPLHQT Trigger: TGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTG...TGTTTTGGGCACTGTTATTACACCGACTGAGTACACTGGAAAAATAATGGCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR CAA 72 bp | ATGACAGAAGCGTTATATTCTTGCTCTAATCGCTGGTaGAAAACCTCCATATGTAAAAGTCCAAGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: MTEALYSCSNRW*KTSICKSPRNP Trigger: GGGGTTTCTTGGACTTTTACATATGGAGGTTTTCAACCAGCGATTAGAGCAAGAATATAACGCTTCTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| 3UTR CAA 72 bp | GGTTTCATGGATTCCCTTAAGATACACAGATTTTTATaGGATGGAGCACATATTTCTGGGAGGACCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFMDSLKIHRFL*DGAHISGRTCS Trigger: AGAACAGGTCCTCCCAGAAATATGTGCTCCATCCAATAAAAATCTGTGTATCTTAAGGGAATCCATGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAAGATAACTGGAATTACTaGCAGCTGTGCTTCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKDNWNY*QLCFKS Trigger: GCTTTTGAAGCACAGCTGTCAGTAATTCCAGTTATC...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR GCA 90 bp | GGAGGACCTGTTCTTGACTACAATATTGTTAAGTGCAGAACATATTTAGCATTCCAGCTAAAGTGCTTTTaGCATGATCCACATGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGPVLDYNIVKCRTYLAFQLKCF*HDPHVQ Trigger: TTGCACATGTGGATCATGGCAAAAGCACTTTAGCTG...GAATGCTAAATATGTTCTGCACTTAACAATATTGTAGTCAAGAACAGGTCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCTGGGAGGACCTGTTCTTGACTACAATATTGTTAAGTGCAGAACATATTCACTCCATCAAACAGTaGTATATTGGCTATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFWEDLFLTTILLSAEHIHSIKQ*YIGYHP Trigger: GGGGTGATAGCCAATATAGCACTGTTTGATGGAGTG...AATATGTTCTGCACTTAACAATATTGTAGTCAAGAACAGGTCCTCCCAGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTATATTTCACGATGGACTTTTaGAGGAGGTATTCGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTALYGTVGVVKMTEALYFTMDF*RRYSFN Trigger: ATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAA...ATATAACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCTTTGTATGGAACAGTTGGGGTTGTCAAAATGACAGAAGCGTTATATTACCAAAGCTTTCAGTaGGTTTTCACGATGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTALYGTVGVVKMTEALYYQSFQ*VFTMDF Trigger: AAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTA...ATATAACGCTTCTGTCATTTTGACAACCCCAACTGTTCCATACAAAGCTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAAAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKNTFSI*FPTLSG Trigger: CCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATT...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAAAAGAACAGCTTTGTATaGAACAGTTGGGGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKKNSFV*NSWGCQ Trigger: TTGACAACCCCAACTGTTCCATACAAAGCTGTTCTT...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| 3UTR CAA 72 bp | AAAGCCACTGTAGCCAAAGGCAGTATAAAAGGCTTCTaGCCATTAACACTCAACTCATATTTTTATTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KATVAKGSIKGF*PLTLNSYFYLA Trigger: AGCCAAATAAAAATATGAGTTGAGTGTTAATGGCAAGAAGCCTTTTATACTGCCTTTGGCTACAGTGGCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGACCTGTTCTTGACTACAATATTGTTAAGTGCAGAACATATTTAGCATTCGCCATGATCCACATGTaGAATGATACTGAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGPVLDYNIVKCRTYLAFAMIHM*NDTEIS Trigger: AGAAATTTCAGTATCATTGCACATGTGGATCATGGC...GAATGCTAAATATGTTCTGCACTTAACAATATTGTAGTCAAGAACAGGTCCTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAATGTGTCTCCTATTTGTaGTTCAGTGACATCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKCVSYL*FSDIFH Trigger: ATGAAAGATGTCACTGAAGCACAAATAGGAGACACA...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAACAATTTTATCTCCCTTaGAAACCACTCCATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KTLEVICISDFSFCCHYKQFYLP*KPLHQT Trigger: TGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTG...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CCA 90 bp | CACTCAACTCATATTTTTATTTGGCTAGGTTTCATGGATTCCCTTAAGATACACCAATTTTATCTCCCTTaGAAACCACTCCATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSTHIFIWLGFMDSLKIHQFYLP*KPLHQT Trigger: TGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTG...GTGTATCTTAAGGGAATCCATGAAACCTAGCCAAATAAAAATATGAGTTGAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154728.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCTATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACGCTCCCAACAGCAGCTaGAATTGCTATCTCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSYAQARLGVTVSCCCLYAPNSS*NCYLIQ Trigger: CTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGC...GTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATAGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CAA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCGGCCACAGTTTGAGCTaGAATACCCTCATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YAQARLGVTVSCCCLYKLGHSLS*NTLICI Trigger: GATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCC...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CAA 90 bp | CCAACAAGCCAGCACTTCTCAACTAGGGTCCAACAACCCTTTCACAGAGGTCGCCAAATATTCTGTTACTaGGGACTTCTCAGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PTSQHFSTRVQQPFHRGRQIFCY*GLLREL Trigger: CAGTTCCCTGAGAAGTCCCAAGTAACAGAATATTTG...GCGACCTCTGTGAAAGGGTTGTTGGACCCTAGTTGAGAAGTGCTGGCTTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CAA 90 bp | TACTTGGGACTTCTCAGGGAACTGTGCAGGGTTGATGATTGTGATCTCCTTCTCGGCCACAGTTTGAGCTaGAATACCCTCATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YLGLLRELCRVDDCDLLLGHSLS*NTLICI Trigger: GATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCC...GAGAAGGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CAA 90 bp | GTTACTTGGGACTTCTCAGGGAACTGTGCAGGGTTGATGATTGTGATCTCCTTCGGCCACAGTTTGAGCTaGAATACCCTCATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VTWDFSGNCAGLMIVISFGHSLS*NTLICI Trigger: GATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCC...GAAGGAGATCACAATCATCAACCCTGCACAGTTCCCTGAGAAGTCCCAAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
||
| CDS-3UTR CAA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCTTTGGAATCTCAATGTaGCCAATCTTCCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YAQARLGVTVSCCCLYKLFGISM*PIFLSF Trigger: GAAGCTGAGGAAGATTGGCAACATTGAGATTCCAAA...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGGCCACAGTTTGAGCTaGAATACCCTCATTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALEGHSLS*NTLICI Trigger: GATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CAA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCACAATTTTATCTCCCTaGGAAACCACTCCATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YAQARLGVTVSCCCLYKLTILSP*ETTPSN Trigger: GTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTGT...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CAA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCTGCTCTAATCGCTGGTaGAAAACCTCCATATGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YAQARLGVTVSCCCLYKLCSNRW*KTSICK Trigger: TTTACATATGGAGGTTTTCAACCAGCGATTAGAGCA...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGCTCCCAACAGCAGCTaGAATTGCTATCTCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALEAPNSS*NCYLIQ Trigger: CTGTATGAGATAGCAATTCAAGCTGCTGTTGGGAGC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS CCA 90 bp | GGAGTCAAATACCAAAGCTTTCAGTGGGTTTTCACGATGGACTTTTaGAGGAGGTATTCGTTCAATGACTGCCTGAAGCACACTGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVKYQSFQWVFTMDF*RRYSFNDCLKHTVN Trigger: GTTGACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTATTTGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
||
| CDS CCA 90 bp | CCCTCTGTACTGGTCAAAGGTGGAGTCAAATACCAAAGCTTTCAGTaGGTTTTCACGATGGACTTTTGGAGGAGGTATTCGTTCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSVLVKGGVKYQSFQ*VFTMDFWRRYSFND Trigger: GTCATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTATTTGACTCCACCTTTGACCAGTACAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
||
| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGAGGAAAGAACAGCTTaGTATGGAACAGTTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALEEERTA*YGTVGV Trigger: AACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
||
| CDS-3UTR CAA 90 bp | TATGCTCAAGCTAGGCTTGGTGTGACAGTCTCCTGCTGCTGCCTGTACAAACTCTCATATTTTTCTGAATaGCTCTTCGTGCCTGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: YAQARLGVTVSCCCLYKLSYFSE*LFVPDK Trigger: TTTGTCAGGCACGAAGAGCAATTCAGAAAAATATGA...GAGTTTGTACAGGCAGCAGCAGGAGACTGTCACACCAAGCCTAGCTTGAGCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
||
| CDS GCA 90 bp | TGCAGATACAATTTTATCTCCCTTGGAAACCACTCCATCAAACAGTaGTATATTGGCTATCACCCCTCTGTACTGGTCAAAGGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CRYNFISLGNHSIKQ*YIGYHPSVLVKGGV Trigger: GACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTGTATCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 90 bp | CAAACAGTGCTATATTGGCTATCACCCCTCTGTACTGGTCAAAGGTaGAGTCAAATACCAAAGCTTTCAGTGGGTTTTCACGATGGACTT | + |
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Preference number: 5 (lower is better) Translates to: QTVLYWLSPLCTGQR*SQIPKLSVGFHDGL Trigger: AAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTATTTGACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 90 bp | ACCACTCCATCAAACAGTGCTATATTGGCTATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAATACCAAAGCTTTCAGTGGGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: TTPSNSAILAITPLY*SKVESNTKAFSGFS Trigger: TGAAAACCCACTGAAAGCTTTGGTATTTGACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGATGGAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCAACAGCAGCTTGAATaGCTATCTCATACAGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALEQQQLE*LSHTVV Trigger: GACAACTGTATGAGATAGCAATTCAAGCTGCTGTTG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTTTGGAATCTCAATGTaGCCAATCTTCCTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALEFGISM*PIFLSF Trigger: GAAGCTGAGGAAGATTGGCAACATTGAGATTCCAAA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS CCA 90 bp | CAATTTTATCTCCCTTGGAAACCACTCCATCAAACAGTGCTATATTaGCTATCACCCCTCTGTACTGGTCAAAGGTGGAGTCAAATACCA | + |
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Preference number: 5 (lower is better) Translates to: QFYLPWKPLHQTVLY*LSPLCTGQRWSQIP Trigger: TGGTATTTGACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGTGCTCTAATCGCTGGTaGAAAACCTCCATATGTAAA | + |
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Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALECSNRW*KTSICK Trigger: TTTACATATGGAGGTTTTCAACCAGCGATTAGAGCA...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGCTTCATAATCAAAACTaGCATATCCAGAAGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALELHNQN*HIQKRE Trigger: CTCTCTCTTCTGGATATGCAAGTTTTGATTATGAAG...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | CATTCTGCTGTCACTATAAATGAGAAGGAACAGAGAACACCTGCTGCCCTTGAGGTGCCTTTATTAATTTaGCAGAGGAAAGAACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: HSAVTINEKEQRTPAALEVPLLI*QRKEQL Trigger: AAGCTGTTCTTTCCTCTGCAAAATTAATAAAGGCAC...CTCAAGGGCAGCAGGTGTTCTCTGTTCCTTCTCATTTATAGTGACAGCAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173205.3 |
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| CDS TCA 90 bp | CTGGATGATTATGTAAATATAATGTGTCTCCTATTTGTGCTTCAGTaGCATCTTTCATCCCAGCAATCAGAAAGCCCACCTGTCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LDDYVNIMCLLFVLQ*HLSSQQSESPPVLH Trigger: ATGCAGGACAGGTGGGCTTTCTGATTGCTGGGATGAAAGATGTCACTGAAGCACAAATAGGAGACACATTATATTTACATAATCATCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS TCA 90 bp | ACCATTGGTTTCGCTGATTTAAACCCAGGCAAGGGTTCCACTGGATaGTTATGTAAATATAATGTGTCTCCTATTTGTGCTTCAGTGACA | + |
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Preference number: 5 (lower is better) Translates to: TIGFADLNPGKGSTG*LCKYNVSPICASVT Trigger: TGTCACTGAAGCACAAATAGGAGACACATTATATTTACATAATCATCCAGTGGAACCCTTGCCTGGGTTTAAATCAGCGAAACCAATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAAGAGGAAAGAACAGCTTaGTATGGAACAGTTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: KTLEVICISDFSFCCHYKEERTA*YGTVGV Trigger: AACCCCAACTGTTCCATACAAAGCTGTTCTTTCCTC...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| CDS GCA 90 bp | TTCCACCATATTTCCATTCAGCAGAATATCCATTTTAACGAGTTCTaGAGTCTGGTAACCGGCATCTTCATAATCAAAACTTGCATATCC | + |
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Preference number: 5 (lower is better) Translates to: FHHISIQQNIHFNEF*SLVTGIFIIKTCIS Trigger: GGATATGCAAGTTTTGATTATGAAGATGCCGGTTACCAGACTGCAGAACTCGTTAAAATGGATATTCTGCTGAATGGAAATATGGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS GCA 90 bp | ACAGTGATTCCTCTTTCTCGTTCTACTTGTAATTTATCAAGAACCTaGTTGTTTTTCTTCGTCTTATCAATTGTTCCTGTTAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVIPLSRSTCNLSRT*LFFFVLSIVPVSSR Trigger: CCTGGAGCTAACAGGAACAATTGATAAGACGAAGAAAAACAAGCAGGTTCTTGATAAATTACAAGTAGAACGAGAAAGAGGAATCACTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS GCA 90 bp | ATCTTAATACACTCCTCACTAGGGATATCAAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGGTCAGCATTCTTCAGATCTATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ILIHSSLGISNTFSI*FPTLSGSAFFRSIL Trigger: TAAGATAGATCTGAAGAATGCTGACCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATTTGATATCCCTAGTGAGGAGTGTATTAAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS-3UTR CAA 90 bp | AAGACCCTGGAAGTAATATGCATCTCAGACTTTTCATTCTGCTGTCACTATAAACTTCATAATCAAAACTaGCATATCCAGAAGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KTLEVICISDFSFCCHYKLHNQN*HIQKRE Trigger: CTCTCTCTTCTGGATATGCAAGTTTTGATTATGAAG...TTTATAGTGACAGCAGAATGAAAAGTCTGAGATGCATATTACTTCCAGGGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087228.11 |
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| CDS CAA 72 bp | TCTTCAACAGGAAATCTAGACATGTCAGGTTTCTCCTaGAGCTCGGCCGCGCTGAAGAGCCTGCAGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTGNLDMSGFS*SSAALKSLQAA Trigger: GGCCGCCTGCAGGCTCTTCAGCGCGGCCGAGCTCAAGGAGAAACCTGACATGTCTAGATTTCCTGTTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 72 bp | CTCCCTTGGAAACCACTCCATCAAACAGTGCTATATTaGCTATCACCCCTCTGTACTGGTCAAAGGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPWKPLHQTVLY*LSPLCTGQRWS Trigger: ACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGATGGAGTGGTTTCCAAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 72 bp | TCTCCCTTGGAAACCACTCCATCAAACAGTGCTATATaGGCTATCACCCCTCTGTACTGGTCAAAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPLETTPSNSAI*AITPLYWSKVE Trigger: CTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGATGGAGTGGTTTCCAAGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 90 bp | AAGCAAGGAAGAAGTTGGCCACAGTTTGAGCTTGAATACCCTCATTaGCATCCACTACCAGTAAAACACCTTGGCATGCAGACAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: KQGRSWPQFELEYPH*HPLPVKHLGMQTVT Trigger: GGTCACTGTCTGCATGCCAAGGTGTTTTACTGGTAGTGGATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCCAACTTCTTCCTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS TCA 72 bp | TTTCACGATGGACTTTTGGAGGAGGTATTCGTTCAATaGCTGCCTGAAGCACACTGTCAACGTTTGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: FHDGLLEEVFVQ*LPEAHCQRLSQ Trigger: TTGGGACAAACGTTGACAGTGTGCTTCAGGCAGTCATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS TCA 72 bp | TATAGGGTACACTCCTGCAAACACCATTGGTTTCGCTaGTTTAAACCCAGGCAAGGGTTCCACTGGATGATT | + |
|
Preference number: 6 (lower is better) Translates to: YRVHSCKHHWFR*FKPRQGFHWMI Trigger: AATCATCCAGTGGAACCCTTGCCTGGGTTTAAATCAGCGAAACCAATGGTGTTTGCAGGAGTGTACCCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS CCA 72 bp | CTGGTCAAAGGTGGAGTCAAATACCAAAGCTTTCAGTaGGTTTTCACGATGGACTTTTGGAGGAGGTATTCG | + |
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Preference number: 6 (lower is better) Translates to: LVKGGVKYQSFQ*VFTMDFWRRYS Trigger: CGAATACCTCCTCCAAAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTATTTGACTCCACCTTTGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 72 bp | AGAAGTTGGCCACAGTTTGAGCTTGAATACCCTCATTaGCATCCACTACCAGTAAAACACCTTGGCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSWPQFELEYPH*HPLPVKHLGMQ Trigger: CTGCATGCCAAGGTGTTTTACTGGTAGTGGATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCCAACTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 72 bp | CTGTGCTTCAAAAGCAAGGAAGAAGTTGGCCACAGTTaGAGCTTGAATACCCTCATTTGCATCCACTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCFKSKEEVGHS*SLNTLICIHYQ Trigger: CTGGTAGTGGATGCAAATGAGGGTATTCAAGCTCAAACTGTGGCCAACTTCTTCCTTGCTTTTGAAGCACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 72 bp | GAGTCAAATACCAAAGCTTTCAGTGGGTTTTCACGATaGACTTTTGGAGGAGGTATTCGTTCAATGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ESNTKAFSGFSR*TFGGGIRSMTA Trigger: GGCAGTCATTGAACGAATACCTCCTCCAAAAGTCCATCGTGAAAACCCACTGAAAGCTTTGGTATTTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 90 bp | ACAATTTTATCTCCCTTGGAAACCACTCCATCAAACAGTGCTATATaGGCTATCACCCCTCTGTACTGGTCAAAGGTGGAGTCAAATACC | + |
|
Preference number: 6 (lower is better) Translates to: TILSPLETTPSNSAI*AITPLYWSKVESNT Trigger: GGTATTTGACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGATGGAGTGGTTTCCAAGGGAGATAAAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS GCA 72 bp | CACTCCTCACTAGGGATATCAAATACTTTTTCAATCTaGTTTCCCACCCTTTCAGGGTCAGCATTCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HSSLGISNTFSI*FPTLSGSAFFR Trigger: TCTGAAGAATGCTGACCCTGAAAGGGTGGGAAAGCAGATTGAAAAAGTATTTGATATCCCTAGTGAGGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 72 bp | TCAAACAGTGCTATATTGGCTATCACCCCTCTGTACTaGTCAAAGGTGGAGTCAAATACCAAAGCTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SNSAILAITPLY*SKVESNTKAFS Trigger: ACTGAAAGCTTTGGTATTTGACTCCACCTTTGACCAGTACAGAGGGGTGATAGCCAATATAGCACTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 72 bp | TATCAAGAACCTGCTTGTTTTTCTTCGTCTTATCAATaGTTCCTGTTAGCTCCAGGAGCCTGTCAGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: YQEPACFSSSYQ*FLLAPGACQLK Trigger: CTTTAGCTGACAGGCTCCTGGAGCTAACAGGAACAATTGATAAGACGAAGAAAAACAAGCAGGTTCTTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 90 bp | CTTGTAATTTATCAAGAACCTGCTTGTTTTTCTTCGTCTTATCAATaGTTCCTGTTAGCTCCAGGAGCCTGTCAGCTAAAGTGCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVIYQEPACFSSSYQ*FLLAPGACQLKCFC Trigger: GCAAAAGCACTTTAGCTGACAGGCTCCTGGAGCTAACAGGAACAATTGATAAGACGAAGAAAAACAAGCAGGTTCTTGATAAATTACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 72 bp | TTTTCTATAGCACTCTTCAGGTTATTGTACTCAGATTaGTCTATAGGGTACACTCCTGCAAACACCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FSIALFRLLYSD*SIGYTPANTIG Trigger: ACCAATGGTGTTTGCAGGAGTGTACCCTATAGACCAATCTGAGTACAATAACCTGAAGAGTGCTATAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS CAA 72 bp | TTTTTCTATAGCACTCTTCAGGTTATTGTACTCAGATaGGTCTATAGGGTACACTCCTGCAAACACCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: FFYSTLQVIVLR*VYRVHSCKHHW Trigger: CCAATGGTGTTTGCAGGAGTGTACCCTATAGACCAATCTGAGTACAATAACCTGAAGAGTGCTATAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS CAA 90 bp | GTGATTCCTCTTTCTCGTTCTACTTGTAATTTATCAAGAACCTGCTaGTTTTTCTTCGTCTTATCAATTGTTCCTGTTAGCTCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VIPLSRSTCNLSRTC*FFFVLSIVPVSSRS Trigger: GCTCCTGGAGCTAACAGGAACAATTGATAAGACGAAGAAAAACAAGCAGGTTCTTGATAAATTACAAGTAGAACGAGAAAGAGGAATCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CAA 90 bp | CTTGAGTCATTTAAGGTCAGTTTTTCTATAGCACTCTTCAGGTTATaGTACTCAGATTGGTCTATAGGGTACACTCCTGCAAACACCATT | + |
|
Preference number: 6 (lower is better) Translates to: LESFKVSFSIALFRL*YSDWSIGYTPANTI Trigger: AATGGTGTTTGCAGGAGTGTACCCTATAGACCAATCTGAGTACAATAACCTGAAGAGTGCTATAGAAAAACTGACCTTAAATGACTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS TCA 72 bp | TATGTAAATATAATGTGTCTCCTATTTGTGCTTCAGTaGCATCTTTCATCCCAGCAATCAGAAAGCCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: YVNIMCLLFVLQ*HLSSQQSESPP Trigger: AGGTGGGCTTTCTGATTGCTGGGATGAAAGATGTCACTGAAGCACAAATAGGAGACACATTATATTTACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS TCA 72 bp | TTCGCTGATTTAAACCCAGGCAAGGGTTCCACTGGATaGTTATGTAAATATAATGTGTCTCCTATTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FADLNPGKGSTG*LCKYNVSPICA Trigger: AGCACAAATAGGAGACACATTATATTTACATAATCATCCAGTGGAACCCTTGCCTGGGTTTAAATCAGCGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087228.11 ENSMUST00000173205.3 |
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| CDS TCA 72 bp | ATTCTTCAGATCTATCTTATTGATAACTGGAATTACTaGCAGCTGTGCTTCAAAAGCAAGGAAGAAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILQIYLIDNWNY*QLCFKSKEEVG Trigger: GCCAACTTCTTCCTTGCTTTTGAAGCACAGCTGTCAGTAATTCCAGTTATCAATAAGATAGATCTGAAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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| CDS CCA 72 bp | TCAGATTGGTCTATAGGGTACACTCAATTTATGAGTTaGCTGTTCATTAGGATTCAAAATGCCTACTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SDWSIGYTQFMS*LFIRIQNAYFI Trigger: AATGAAGTAGGCATTTTGAATCCTAATGAACAGCCAACTCATAAATTGAGTGTACCCTATAGACCAATCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 |
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| CDS GCA 72 bp | CCTCTTTCTCGTTCTACTTGTAATTTATCAAGAACCTaGTTGTTTTTCTTCGTCTTATCAATTGTTCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLSRSTCNLSRT*LFFFVLSIVPV Trigger: AACAGGAACAATTGATAAGACGAAGAAAAACAAGCAGGTTCTTGATAAATTACAAGTAGAACGAGAAAGAGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031113.13 ENSMUST00000087228.11 ENSMUST00000132169.8 ENSMUST00000144363.8 ENSMUST00000154728.8 ENSMUST00000173205.3 |
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