Pregenerated sensors for GUCA1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023979Ensembl transcript IDs: ENSMUST00000024774.14, ENSMUST00000145462.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCATGAGGCAGAGGACGGGTCTATGGGGGAGGGCCTCCTCTCCTaGAAACCAGACTGCAGCCTGGGGTTCTATGTAGCTTGCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: GHEAEDGSMGEGLLS*KPDCSLGFYVACQF Trigger: GAACTGGCAAGCTACATAGAACCCCAGGCTGCAGTCTGGTTTGCAGGAGAGGAGGCCCTCCCCCATAGACCCGTCCTCTGCCTCATGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR GCA 90 bp | GAAGTCCACACCAACCGGGAACAGGCTTCAGCCAACAAGACCTCCTaGTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: EVHTNREQASANKTS*YVTPGTLEESWRGV Trigger: CACTCCCCTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCTGAAGCCTGTTCCCGGTTGGTGTGGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 90 bp | CTGACTGAACCCCACTTCAGATCCAGCAGCCATTGCTTGGCCCCTTaGGGAAGTCCACACCAACCGGGAACAGGCTTCAGCCAACAAGAC | + |
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Preference number: 1 (lower is better) Translates to: LTEPHFRSSSHCLAP*GSPHQPGTGFSQQD Trigger: GTCTTGTTGGCTGAAGCCTGTTCCCGGTTGGTGTGGACTTCCGCAAGGGGCCAAGCAATGGCTGCTGGATCTGAAGTGGGGTTCAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 90 bp | GAGGACGGGTCTATGGGGGAGGGCCTCCTCTCCTGCAAACCAGACTaGAGCCTGGGGTTCTATGTAGCTTGCCAGTTCTCTAAAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: EDGSMGEGLLSCKPD*SLGFYVACQFSKGA Trigger: TGCTCCTTTAGAGAACTGGCAAGCTACATAGAACCCCAGGCTGCAGTCTGGTTTGCAGGAGAGGAGGCCCTCCCCCATAGACCCGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR GCA 90 bp | CCTGAAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCTCTaGTGCGTGATCCAGCAGCCTGGGTTGATATCCATTTGTAGCATC | + |
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Preference number: 1 (lower is better) Translates to: PEGSLGSQNMALLRL*CVIQQPGLISICSI Trigger: GATGCTACAAATGGATATCAACCCAGGCTGCTGGATCACGCAGCAGAGGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR CCA 90 bp | GAGCTGGGCAGAGTCCTCCCCAGCCGGTGCTCAGGTTGGTTGGACTaGGTCGTTATGATCCTTCCCCATCCTTGCTTTCTTTCCAGACTG | + |
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Preference number: 1 (lower is better) Translates to: ELGRVLPSRCSGWLD*VVMILPHPCFLSRL Trigger: CAGTCTGGAAAGAAAGCAAGGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGGGGAGGACTCTGCCCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 90 bp | CTGAAGAAGAGACTGACTGAACCCCACTTCAGATCCAGCAGCCATTaGTTGGCCCCTTGCGGAAGTCCACACCAACCGGGAACAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LKKRLTEPHFRSSSH*LAPCGSPHQPGTGF Trigger: GAAGCCTGTTCCCGGTTGGTGTGGACTTCCGCAAGGGGCCAAGCAATGGCTGCTGGATCTGAAGTGGGGTTCAGTCAGTCTCTTCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 90 bp | GAAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCTCTGCTaGGTGATCCAGCAGCCTGGGTTGATATCCATTTGTAGCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: EGSLGSQNMALLRLC*VIQQPGLISICSIF Trigger: GAAGATGCTACAAATGGATATCAACCCAGGCTGCTGGATCACGCAGCAGAGGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR TCA 90 bp | GAGTCCTCCCCAGCCGGTGCTCAGGTTGGTTGGACTGGGTCGTTATaGTCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCA | + |
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Preference number: 1 (lower is better) Translates to: ESSPAGAQVGWTGSL*SFPILAFFPDCVLP Trigger: TGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGGGGAGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR CCA 90 bp | CAGGAGGTTAGGGAGTCCAACAGCTGTCGGAGGCAAAGTCTGGCCTaGAATTCAAATGCCAGGTTACCCCAGAGATGCAGAGAAGACGTC | + |
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Preference number: 1 (lower is better) Translates to: QEVRESNSCRRQSLA*NSNARLPQRCREDV Trigger: GACGTCTTCTCTGCATCTCTGGGGTAACCTGGCATTTGAATTCCAGGCCAGACTTTGCCTCCGACAGCTGTTGGACTCCCTAACCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR TCA 90 bp | ACACTGGTCCTACTTAGTGTGACACTGGTCCTACTTCCTGTCCTCTaGGGTGACTTCCCCAGCTGCACAGATGGAAGGAGGCAGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: TLVLLSVTLVLLPVL*GDFPSCTDGRRQRK Trigger: CTTTCTCTGCCTCCTTCCATCTGTGCAGCTGGGGAAGTCACCTCAGAGGACAGGAAGTAGGACCAGTGTCACACTAAGTAGGACCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTGGGCCCCTGAAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCAGTACTGGCTGCCCTTaGAGAGGACCCAGGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: ECGPLKGPWALRTWRFSASTGCP*RGPRFK Trigger: TTTGAACCTGGGTCCTCTGCAAGGGCAGCCAGTACT...GGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTCAGGGGCCCACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAGGAGGGTGGAAGAGACGGCCATGAGGCAGAGGACGGGTCTATGGGGGCTTTTCTGGCCTCTGTaGGCATGGCACACACTTGCT | + |
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Preference number: 2 (lower is better) Translates to: EDRRVEETAMRQRTGLWGLFWPL*AWHTLA Trigger: AGCAAGTGTGTGCCATGCCCACAGAGGCCAGAAAAG...CCCCCATAGACCCGTCCTCTGCCTCATGGCCGTCTCTTCCACCCTCCTGTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATTACCCACTTATCGCGACGGGCGCCCTCGATGAACTCGGTCAGAGACAGCCAGAGGACGGGTCTATaGGGGAGGGCCTCCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FITHLSRRAPSMNSVRDSQRTGL*GRASSP Trigger: AGGAGAGGAGGCCCTCCCCCATAGACCCGTCCTCTG...GCTGTCTCTGACCGAGTTCATCGAGGGCGCCCGTCGCGATAAGTGGGTAATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAACAAGACCTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGCAGAGACAGCTGGCCTaGGCGAGGGTGGGAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SQQDLLLCNSGDPGGVLEQRQLA*ARVGET Trigger: TGTCTCTCCCACCCTCGCCCAGGCCAGCTGTCTCTG...CTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGACAGGAGGGTGGAAGAGACGGCCATGAGGCAGAGGACGGGTCTATGGGGGGGCATGGCACACACTTaGTACTCAGACATATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: EDRRVEETAMRQRTGLWGGMAHT*YSDICA Trigger: TGCACATATGTCTGAGTAGCAAGTGTGTGCCATGCC...CCCCCATAGACCCGTCCTCTGCCTCATGGCCGTCTCTTCCACCCTCCTGTCCTC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGGCCCCTGAAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCTCGGGTTCTATGTAGCTTaGCAGTTCTCTAAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: VWAPEGSLGSQNMALLRLGFYVA*QFSKGA Trigger: TGCTCCTTTAGAGAACTGGCAAGCTACATAGAACCC...GAGGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTCAGGGGCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR CAA 90 bp | AAGAAGAGACTGACTGAACCCCACTTCAGATCCAGCAGCCATTGCTaGGCCCCTTGCGGAAGTCCACACCAACCGGGAACAGGCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: KKRLTEPHFRSSSHC*APCGSPHQPGTGFS Trigger: GCTGAAGCCTGTTCCCGGTTGGTGTGGACTTCCGCAAGGGGCCAAGCAATGGCTGCTGGATCTGAAGTGGGGTTCAGTCAGTCTCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR CCA 90 bp | GGAATTCAAATGCCAGGTTACCCCAGAGATGCAGAGAAGACGTCTCCATCCTTGACCCTGGAGGAGTCTTaGAGGGGAGTGTGGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GIQMPGYPRDAEKTSPSLTLEES*RGVWAP Trigger: AGGGGCCCACACTCCCCTCCAAGACTCCTCCAGGGT...CAAGGATGGAGACGTCTTCTCTGCATCTCTGGGGTAACCTGGCATTTGAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTGCCCCTCCCAGGAGCAGCAGTaGAGCAGAGTAACGTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: ILPHPCFLSRLRSTSLCPSQEQQ*SRVTSG Trigger: TCCCGACGTTACTCTGCTCCACTGCTGCTCCTGGGA...GGGGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR GCA 90 bp | AGCCAACAAGACCTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGCTTTCTTTCCAGACTaGGTTCTACCAGCCTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SQQDLLLCNSGDPGGVLEAFFPD*VLPAFA Trigger: GGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGC...CTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTGTGACACTGGTCCTACTTAGTGTGACACTGGTCCTACTTCCTGTCCTCGGTGACTTCCCCAGCTaGACAGATGGAAGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PSVTLVLLSVTLVLLPVLGDFPS*TDGRRQ Trigger: CTGCCTCCTTCCATCTGTGCAGCTGGGGAAGTCACC...GAGGACAGGAAGTAGGACCAGTGTCACACTAAGTAGGACCAGTGTCACACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR CAA 90 bp | AACATGGCGCTTCTCCGCCTCTGCTGCGTGATCCAGCAGCCTGGGTaGATATCCATTTGTAGCATCTTCATTACCCACTTATCGCGACGG | + |
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Preference number: 2 (lower is better) Translates to: NMALLRLCCVIQQPG*ISICSIFITHLSRR Trigger: CCGTCGCGATAAGTGGGTAATGAAGATGCTACAAATGGATATCAACCCAGGCTGCTGGATCACGCAGCAGAGGCGGAGAAGCGCCATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTAGGCTTGGTGACAATGCCTTTATCCACAGAAGCACATCTCTGGTCACTTACCCTGGAGGAGTCTTaGAGGGGAGTGTGGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PLGLVTMPLSTEAHLWSLTLEES*RGVWAP Trigger: AGGGGCCCACACTCCCCTCCAAGACTCCTCCAGGGT...AAGTGACCAGAGATGTGCTTCTGTGGATAAAGGCATTGTCACCAAGCCTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR TCA 90 bp | GGAATTCAAATGCCAGGTTACCCCAGAGATGCAGAGAAGACGTCTCCATCCTTGCGGCCCCATTTCCTCTaGGAACCGCTGAAGATTAGT | + |
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Preference number: 2 (lower is better) Translates to: GIQMPGYPRDAEKTSPSLRPHFL*EPLKIS Trigger: ACTAATCTTCAGCGGTTCTCAGAGGAAATGGGGCCG...CAAGGATGGAGACGTCTTCTCTGCATCTCTGGGGTAACCTGGCATTTGAATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR CCA 90 bp | TTTAATGTGAAATCTATATCTATTCAAGGTAACACCAACAATCCACCAGGTTCCCCCCAGCTGCACAGATaGAAGGAGGCAGAGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: FNVKSISIQGNTNNPPGSPQLHR*KEAEKG Trigger: GCCTTTCTCTGCCTCCTTCCATCTGTGCAGCTGGGG...GGAACCTGGTGGATTGTTGGTGTTACCTTGAATAGATATAGATTTCACATTAAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR TCA 90 bp | TTTAATGTGAAATCTATATCTATTCAAGGTAACACCAACAATCCACCAGGTTCCCTTTGTCATCCTTGGTaGGCACATCCTGGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FNVKSISIQGNTNNPPGSLCHPW*AHPGEE Trigger: CTCCTCCCCAGGATGTGCTCACCAAGGATGACAAAG...GGAACCTGGTGGATTGTTGGTGTTACCTTGAATAGATATAGATTTCACATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR TCA 90 bp | TTTAATGTGAAATCTATATCTATTCAAGGTAACACCAACAATCCACCAGGTTCCGAAGAAGAGACTGACTaGACCCCACTTCAGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: FNVKSISIQGNTNNPPGSEEETD*TPLQIQ Trigger: CTGGATCTGAAGTGGGGTTCAGTCAGTCTCTTCTTC...GGAACCTGGTGGATTGTTGGTGTTACCTTGAATAGATATAGATTTCACATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR TCA 72 bp | GACCCTGGAGGAGTCTTGGAGGGGAGTGTGGGCCCCTaGAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: DPGGVLEGSVGP*RVPGLSEHGAS Trigger: AGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTCAGGGGCCCACACTCCCCTCCAAGACTCCTCCAGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGGGCCCCTGAAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCTCAAGTACTGGCTGCCCTaGCAGAGGACCCAGGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: VWAPEGSLGSQNMALLRLKYWLP*QRTQVQ Trigger: TTGAACCTGGGTCCTCTGCAAGGGCAGCCAGTACTT...GAGGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTCAGGGGCCCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR TCA 72 bp | GATCACGGAGGTAGCCCTCCCCTTTGTCATCCTTGGTaGGCACATCCTGGGGAGGAGCTGGGCAGAGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: DHGGSPPLCHPW*AHPGEELGRVL Trigger: GAGGACTCTGCCCAGCTCCTCCCCAGGATGTGCTCACCAAGGATGACAAAGGGGAGGGCTACCTCCGTGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR TCA 72 bp | TCTTCATTACCCACTTATCGCGACGGGCGCCCTCGATaGACTCGGTCAGAGACAGCTGGCCTGGGCGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SSLPTYRDGRPR*TRSETAGLGEG Trigger: ACCCTCGCCCAGGCCAGCTGTCTCTGACCGAGTTCATCGAGGGCGCCCGTCGCGATAAGTGGGTAATGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR CCA 72 bp | GAGCTGGGCAGAGTCCTCCCCAGCCGGTGCTCAGGTTaGTTGGACTGGGTCGTTATGATCCTTCCCCATCCT | + |
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Preference number: 3 (lower is better) Translates to: ELGRVLPSRCSG*LDWVVMILPHP Trigger: AGGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGGGGAGGACTCTGCCCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 72 bp | ACCAACCGGGAACAGGCTTCAGCCAACAAGACCTCCTaGTATGTAACTCCGGGGACCCTGGAGGAGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: TNREQASANKTS*YVTPGTLEESW Trigger: CCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCTGAAGCCTGTTCCCGGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 72 bp | TCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCTCTaGTGCGTGATCCAGCAGCCTGGGTTGATATCCATT | + |
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Preference number: 3 (lower is better) Translates to: SLGSQNMALLRL*CVIQQPGLISI Trigger: AATGGATATCAACCCAGGCTGCTGGATCACGCAGCAGAGGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR GCA 72 bp | TCTATGGGGGAGGGCCTCCTCTCCTGCAAACCAGACTaGAGCCTGGGGTTCTATGTAGCTTGCCAGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SMGEGLLSCKPD*SLGFYVACQFS Trigger: AGAGAACTGGCAAGCTACATAGAACCCCAGGCTGCAGTCTGGTTTGCAGGAGAGGAGGCCCTCCCCCATAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR GCA 72 bp | CTGGGCTCTCAGAACATGGCGCTTCTCCGCCTCTGCTaGGTGATCCAGCAGCCTGGGTTGATATCCATTTGT | + |
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Preference number: 3 (lower is better) Translates to: LGSQNMALLRLC*VIQQPGLISIC Trigger: ACAAATGGATATCAACCCAGGCTGCTGGATCACGCAGCAGAGGCGGAGAAGCGCCATGTTCTGAGAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR TCA 72 bp | CCAGCCGGTGCTCAGGTTGGTTGGACTGGGTCGTTATaGTCCTTCCCCATCCTTGCTTTCTTTCCAGACTGC | + |
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Preference number: 3 (lower is better) Translates to: PAGAQVGWTGSL*SFPILAFFPDC Trigger: GCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR TCA 72 bp | CATGGAAATGGTAGCAGGCTCACACTAGAGACGGGATaGGAAGAAGGACCTGGGGAGCAACACCGAGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: HGNGSRLTLETG*EEGPGEQHRAD Trigger: GTCTGCTCGGTGTTGCTCCCCAGGTCCTTCTTCTCATCCCGTCTCTAGTGTGAGCCTGCTACCATTTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR CCA 72 bp | AGAGTCCTCCCCAGCCGGTGCTCAGGTTGGTTGGACTaGGTCGTTATGATCCTTCCCCATCCTTGCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: RVLPSRCSGWLD*VVMILPHPCFL Trigger: AAGAAAGCAAGGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGGGGAGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR TCA 72 bp | CTACTTAGTGTGACACTGGTCCTACTTCCTGTCCTCTaGGGTGACTTCCCCAGCTGCACAGATGGAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LLSVTLVLLPVL*GDFPSCTDGRR Trigger: CCTCCTTCCATCTGTGCAGCTGGGGAAGTCACCTCAGAGGACAGGAAGTAGGACCAGTGTCACACTAAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 72 bp | CTGGCCTGGAATTCAAATGCCAGGTTACCCCAGAGATaGAGAGAAGACGTCTCCATCCTTGAGGAGGCATGG | + |
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Preference number: 3 (lower is better) Translates to: LAWNSNARLPQR*REDVSILEEAW Trigger: CCATGCCTCCTCAAGGATGGAGACGTCTTCTCTGCATCTCTGGGGTAACCTGGCATTTGAATTCCAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR CCA 72 bp | AGGGAGTCCAACAGCTGTCGGAGGCAAAGTCTGGCCTaGAATTCAAATGCCAGGTTACCCCAGAGATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RESNSCRRQSLA*NSNARLPQRCR Trigger: TCTGCATCTCTGGGGTAACCTGGCATTTGAATTCCAGGCCAGACTTTGCCTCCGACAGCTGTTGGACTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR CCA 72 bp | AGGGGATCTGAGACTCTTTTCTGGCCTCTGTGGGCATaGCACACACTTGCTACTCAGACATATGTGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RGSETLFWPLWA*HTLATQTYVQA Trigger: GGCCTGCACATATGTCTGAGTAGCAAGTGTGTGCCATGCCCACAGAGGCCAGAAAAGAGTCTCAGATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGCAGAGAAAGGCAGAGAGGTTCCCTGGTAGCCTAGCTTCTATATTGGGTTCCCCTTTGTCATCCTaGGTGAGCACATCCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: RRQRKAERFPGSLASILGSPLSS*VSTSWG Trigger: TCCCCAGGATGTGCTCACCAAGGATGACAAAGGGGA...ACCCAATATAGAAGCTAGGCTACCAGGGAACCTCTCTGCCTTTCTCTGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR-3UTR CAA 90 bp | CCAAGTGTGACACTGGTCCTACTTAGTGTGACACTGGTCCTACTTCCTGTCCTCGATCCTTCCCCATCCTaGCTTTCTTTCCAGACTGCG | + |
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Preference number: 3 (lower is better) Translates to: PSVTLVLLSVTLVLLPVLDPSPS*LSFQTA Trigger: CGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGATC...GAGGACAGGAAGTAGGACCAGTGTCACACTAAGTAGGACCAGTGTCACACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| 3UTR GCA 72 bp | TGCAAACCAGACTGCAGCCTGGGGTTCTATGTAGCTTaGCAGTTCTCTAAAGGAGCATTCAGGCCATTAGGC | + |
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Preference number: 3 (lower is better) Translates to: CKPDCSLGFYVA*QFSKGAFRPLG Trigger: GCCTAATGGCCTGAATGCTCCTTTAGAGAACTGGCAAGCTACATAGAACCCCAGGCTGCAGTCTGGTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAATGTGAAATCTATATCTATTCAAGGTAACACCAACAATCCACCAGGTTCCCCATTGCTTGGCCCCTaGCGGAAGTCCACACCAACC | + |
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Preference number: 3 (lower is better) Translates to: FNVKSISIQGNTNNPPGSPLLGP*RKSTPT Trigger: GGTTGGTGTGGACTTCCGCAAGGGGCCAAGCAATGG...GGAACCTGGTGGATTGTTGGTGTTACCTTGAATAGATATAGATTTCACATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
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| CDS-3UTR CCA 90 bp | CTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGGGAGTGTGGGCTCGGGCGTGAGCAGCTaGCCCTGGTGTTCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCNSGDPGGVLEGSVGSGVSS*PWCSRS Trigger: GGATCTGGAACACCAGGGCCAGCTGCTCACGCCCGA...GCCCACACTCCCCTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| 3UTR CAA 72 bp | GGAGCTGGGCAGAGTCCTCCCCAGCCGGTGCTCAGGTaGGTTGGACTGGGTCGTTATGATCCTTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGQSPPQPVLR*VGLGRYDPSPS Trigger: GGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGGGGAGGACTCTGCCCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGGGAGTGTGGGCCGCTTGTGTTCCAGGCTaGCCCTCAGCACGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCYVTPGTLEESWRGVWAACVPG*PSARGS Trigger: TGAACCTCGTGCTGAGGGGCAGCCTGGAACACAAGC...GGCCCACACTCCCCTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGGAGGGTGGAAGAGACGGCCATGAGGCAGAGGACGGGTCTATGGGGGAGGTTCCAGGCGGTCGATaGAGCCATTTCGGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQEGGRDGHEAEDGSMGEVPGGR*SHFGPC Trigger: ACAAGGACCGAAATGGCTGCATCGACCGCCTGGAAC...CTCCCCCATAGACCCGTCCTCTGCCTCATGGCCGTCTCTTCCACCCTCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGGGAGTGTGGGCCCAGGGATGTGGTGGTTaGGGTGGGGGACTTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCYVTPGTLEESWRGVWAQGCGG*GGGLLG Trigger: TCCCAAAAGTCCCCCACCCCAACCACCACATCCCTG...GGCCCACACTCCCCTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| 3UTR CAA 72 bp | CTGGGCAGAGTCCTCCCCAGCCGGTGCTCAGGTTGGTaGGACTGGGTCGTTATGATCCTTCCCCATCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRVLPSRCSGW*DWVVMILPHPC Trigger: GCAAGGATGGGGAAGGATCATAACGACCCAGTCCAACCAACCTGAGCACCGGCTGGGGAGGACTCTGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTGCCCCGACGGGCGCCCTCGATaGACTCGGTCAGAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPHPCFLSRLRSTSLCPDGRPR*TRSETA Trigger: AGCTGTCTCTGACCGAGTTCATCGAGGGCGCCCGTC...GGGGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTGCCCCTCGGGCGTGAGCAGCTaGCCCTGGTGTTCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ILPHPCFLSRLRSTSLCPSGVSS*PWCSRS Trigger: GGATCTGGAACACCAGGGCCAGCTGCTCACGCCCGA...GGGGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| 3UTR CAA 72 bp | CTGACTGAACCCCACTTCAGATCCAGCAGCCATTGCTaGGCCCCTTGCGGAAGTCCACACCAACCGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTEPHFRSSSHC*APCGSPHQPGT Trigger: TGTTCCCGGTTGGTGTGGACTTCCGCAAGGGGCCAAGCAATGGCTGCTGGATCTGAAGTGGGGTTCAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR GCA 90 bp | AGCCAACAAGACCTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGTTCCAGGCGGTCGATaGAGCCATTTCGGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQDLLLCNSGDPGGVLEVPGGR*SHFGPC Trigger: ACAAGGACCGAAATGGCTGCATCGACCGCCTGGAAC...CTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAACAAGACCTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGCTCTTACAAATGTGTaGGCCTGCGTTTTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQQDLLLCNSGDPGGVLEALTNV*ACVLAP Trigger: GGGAGCCAAAACGCAGGCGCACACATTTGTAAGAGC...CTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGGGGAGTGTGGGCCACTCCAGGAAGTCAATaGTGTTGTCCCCATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCYVTPGTLEESWRGVWATPGSQ*CCPHSC Trigger: ACAAGAATGGGGACAACACCATTGACTTCCTGGAGT...GGCCCACACTCCCCTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAACAAGACCTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGTTCTTGTACCACTCCTaGAACTCCGCCACATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQQDLLLCNSGDPGGVLEFLYHS*NSATSI Trigger: GATGGATGTGGCGGAGTTGCAGGAGTGGTACAAGAA...CTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGGGATCTGAGACTCTTTTCTGGCCTCTGTGGGCATGGCACACACTTGCTATCAGTAGCAGGGATGTaGTGGTTGGGGTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGDLRLFSGLCGHGTHLLSVAGM*WLGWGT Trigger: AGTCCCCCACCCCAACCACCACATCCCTGCTACTGA...TAGCAAGTGTGTGCCATGCCCACAGAGGCCAGAAAAGAGTCTCAGATCCCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGTGACACTGGTCCTACTTAGTGTGACACTGGTCCTACTTCCTGTCCTCCACGAGGTTCAGGGCTaGCACATACTCCAGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTLVLLSVTLVLLPVLHEVQG*HILQEV Trigger: GACTTCCTGGAGTATGTGGCAGCCCTGAACCTCGTG...GAGGACAGGAAGTAGGACCAGTGTCACACTAAGTAGGACCAGTGTCACACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR GCA 90 bp | GGCTCAAGGGTTAAAAGTACTGGCTGCCCTTGCAGAGGACCCAGGTTCAAATCCTTCTTGTACCACTCCTaGAACTCCGCCACATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSRVKSTGCPCRGPRFKSFLYHS*NSATSI Trigger: GATGGATGTGGCGGAGTTGCAGGAGTGGTACAAGAA...GGATTTGAACCTGGGTCCTCTGCAAGGGCAGCCAGTACTTTTAACCCTTGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAAGGGTTAAAAGTACTGGCTGCCCTTGCAGAGGACCCAGGTTCAAATCCTCGAAGGCTCGGAACATaGTCTCTACATACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGLKVLAALAEDPGSNPRRLGT*SLHTGW Trigger: CCAGCCAGTATGTAGAGAGCATGTTCCGAGCCTTCG...AGGATTTGAACCTGGGTCCTCTGCAAGGGCAGCCAGTACTTTTAACCCTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTGCCCCTCCAGCAGCCTGGGTTaGTATCCATTTGTAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPHPCFLSRLRSTSLCPSSSLG*YPFVAS Trigger: AGATGCTACAAATGGATATCAACCCAGGCTGCTGGA...GGGGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR GCA 90 bp | ATTGGGTGCATGAAGGACATTTGCGGGATAACTGGAAGCCATCTAGTCGACCTGCGAAGGCTCGGAACATaGTCTCTACATACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGCMKDICGITGSHLVDLRRLGT*SLHTGW Trigger: CCAGCCAGTATGTAGAGAGCATGTTCCGAGCCTTCG...CAGGTCGACTAGATGGCTTCCAGTTATCCCGCAAATGTCCTTCATGCACCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTAAAGGAGCATTCAGGCCATTAGGCTTGGTGACAATGCCTTTATCCACAGCTTGTGTTCCAGGCTaGCCCTCAGCACGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSKGAFRPLGLVTMPLSTACVPG*PSARGS Trigger: TGAACCTCGTGCTGAGGGGCAGCCTGGAACACAAGC...TGTGGATAAAGGCATTGTCACCAAGCCTAATGGCCTGAATGCTCCTTTAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| 3UTR CAA 72 bp | TTGGTTGGACTGGGTCGTTATGATCCTTCCCCATCCTaGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVGLGRYDPSPS*LSFQTAFYQPL Trigger: CAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGATCATAACGACCCAGTCCAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR CCA 90 bp | ATTGGGTGCATGAAGGACATTTGCGGGATAACTGGAAGCCATCTAGTCGACCTGACTCCAGGAAGTCAATaGTGTTGTCCCCATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGCMKDICGITGSHLVDLTPGSQ*CCPHSC Trigger: ACAAGAATGGGGACAACACCATTGACTTCCTGGAGT...CAGGTCGACTAGATGGCTTCCAGTTATCCCGCAAATGTCCTTCATGCACCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGTGACAATGCCTTTATCCACAGAAGCACATCTCTGGTCACTTTTTCTCTTCACCAGCCAATCTTaGAAGTGCTCTTACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVTMPLSTEAHLWSLFLFTSQS*KCSYKC Trigger: ACATTTGTAAGAGCACTTCCAAGATTGGCTGGTGAA...GAGAAAAAGTGACCAGAGATGTGCTTCTGTGGATAAAGGCATTGTCACCAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS CCA 90 bp | ACCAGGAGGAAGATCCTGTCCACCACCTCCTCGGGCGTGAGCAGCTaGCCCTGGTGTTCCAGATCCAGCTCCGCTCGGCAGGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRRKILSTTSSGVSS*PWCSRSSSARQAFF Trigger: GAAGAAAGCCTGCCGAGCGGAGCTGGATCTGGAACACCAGGGCCAGCTGCTCACGCCCGAGGAGGTGGTGGACAGGATCTTCCTCCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS CCA 90 bp | AGGAAGATCCTGTCCACCACCTCCTCGGGCGTGAGCAGCTGGCCCTaGTGTTCCAGATCCAGCTCCGCTCGGCAGGCTTTCTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKILSTTSSGVSSWP*CSRSSSARQAFFSL Trigger: CAAGCTGAAGAAAGCCTGCCGAGCGGAGCTGGATCTGGAACACCAGGGCCAGCTGCTCACGCCCGAGGAGGTGGTGGACAGGATCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR CAA 90 bp | GAGACGGCCATGAGGCAGAGGACGGGTCTATGGGGGAGGGCCTCCTCTCCTGCATCCACGACAAACTTCTaGTACCACTCCTGCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETAMRQRTGLWGRASSPASTTNF*YHSCNS Trigger: GGAGTTGCAGGAGTGGTACAAGAAGTTTGTCGTGGA...TGCAGGAGAGGAGGCCCTCCCCCATAGACCCGTCCTCTGCCTCATGGCCGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGGGCCCCTGAAGGGTCCCTGGGCTCTCAGAACATGGCGCTTCTCCGCCACCTTGAAGAAGCGCTaGAACTCGTGCATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECGPLKGPWALRTWRFSATLKKR*NSCMKS Trigger: GCTCTTCATGCACGAGTTCAAGCGCTTCTTCAAGGT...GGCGGAGAAGCGCCATGTTCTGAGAGCCCAGGGACCCTTCAGGGGCCCACACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAACAAGACCTCCTGCTATGTAACTCCGGGGACCCTGGAGGAGTCTTGGAGAAGGTCCACTTGAGCTaGTGTTCCAGGCTGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQQDLLLCNSGDPGGVLEKVHLS*CSRLPL Trigger: GAGGGGCAGCCTGGAACACAAGCTCAAGTGGACCTT...CTCCAAGACTCCTCCAGGGTCCCCGGAGTTACATAGCAGGAGGTCTTGTTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTATGGGGGAGGGCCTCCTCTCCTGCAAACCAGACTGCAGCCTGGGGTTCCTTCACCAGCCAATCTaGGAAGTGCTCTTACAAATG | + |
|
Preference number: 5 (lower is better) Translates to: GSMGEGLLSCKPDCSLGFLHQPI*EVLLQM Trigger: CATTTGTAAGAGCACTTCCAAGATTGGCTGGTGAAG...GAACCCCAGGCTGCAGTCTGGTTTGCAGGAGAGGAGGCCCTCCCCCATAGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS TCA 90 bp | TTTGTAGCATCTTCATTACCCACTTATCGCGACGGGCGCCCTCGATaGACTCGGTCAGAGACAGCTGGCCGTCTCCATTCTCGTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FVASSLPTYRDGRPR*TRSETAGRLHSRPP Trigger: TGGTGGACGAGAATGGAGACGGCCAGCTGTCTCTGACCGAGTTCATCGAGGGCGCCCGTCGCGATAAGTGGGTAATGAAGATGCTACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS GCA 90 bp | CTGGCCTCCTCATTGCCCGTGACCTTGAAGAAGCGCTTGAACTCGTaGATGAAGAGCGTCCCACTGGGACACTCCACGACAAACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LASSLPVTLKKRLNS*MKSVPLGHSTTNFL Trigger: CAAGAAGTTTGTCGTGGAGTGTCCCAGTGGGACGCTCTTCATGCACGAGTTCAAGCGCTTCTTCAAGGTCACGGGCAATGAGGAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTGCCCCTGGCTGGCCTCCTCATaGCCCGTGACCTTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILPHPCFLSRLRSTSLCPWLASS*PVTLKK Trigger: CTTCTTCAAGGTCACGGGCAATGAGGAGGCCAGCCA...GGGGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS GCA 90 bp | CTTTTGGGAGGCATATCGCACAGACAGGGCAGTTTCCCGGCAGACTaGATCTCTCTTACCGTCTCCATTCTCGTCCACCAGGAGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLGGISHRQGSFPAD*ISLTVSILVHQEED Trigger: ATCTTCCTCCTGGTGGACGAGAATGGAGACGGTAAGAGAGATGCAGTCTGCCGGGAAACTGCCCTGTCTGTGCGATATGCCTCCCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGTGACACTGGTCCTACTTAGTGTGACACTGGTCCTACTTCCTGTCCTCAAGGTCCACTTGAGCTaGTGTTCCAGGCTGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSVTLVLLSVTLVLLPVLKVHLS*CSRLPL Trigger: GAGGGGCAGCCTGGAACACAAGCTCAAGTGGACCTT...GAGGACAGGAAGTAGGACCAGTGTCACACTAAGTAGGACCAGTGTCACACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCCCCATCCTTGCTTTCTTTCCAGACTGCGTTCTACCAGCCTTTGCCCCTCCACGACAAACTTCTaGTACCACTCCTGCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILPHPCFLSRLRSTSLCPSTTNF*YHSCNS Trigger: GGAGTTGCAGGAGTGGTACAAGAAGTTTGTCGTGGA...GGGGCAAAGGCTGGTAGAACGCAGTCTGGAAAGAAAGCAAGGATGGGGAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS-3UTR CAA 90 bp | GGAATTCAAATGCCAGGTTACCCCAGAGATGCAGAGAAGACGTCTCCATCCTTGACCTTGAAGAAGCGCTaGAACTCGTGCATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIQMPGYPRDAEKTSPSLTLKKR*NSCMKS Trigger: GCTCTTCATGCACGAGTTCAAGCGCTTCTTCAAGGT...CAAGGATGGAGACGTCTTCTCTGCATCTCTGGGGTAACCTGGCATTTGAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS TCA 72 bp | CCAGGAGGAAGATCCTGTCCACCACCTCCTCGGGCGTaGGCAGCTGGCCCTGGTGTTCCAGATCCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGGRSCPPPPRA*AAGPGVPDPAP Trigger: CGGAGCTGGATCTGGAACACCAGGGCCAGCTGCTCACGCCCGAGGAGGTGGTGGACAGGATCTTCCTCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS CCA 72 bp | AAGATCCTGTCCACCACCTCCTCGGGCGTGAGCAGCTaGCCCTGGTGTTCCAGATCCAGCTCCGCTCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KILSTTSSGVSS*PWCSRSSSARQ Trigger: CTGCCGAGCGGAGCTGGATCTGGAACACCAGGGCCAGCTGCTCACGCCCGAGGAGGTGGTGGACAGGATCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS GCA 72 bp | CTGGGACACTCCACGACAAACTTCTTGTACCACTCCTaGAACTCCGCCACATCCATCTCCCCGGCCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGHSTTNFLYHS*NSATSISPAAS Trigger: GGAGGCGGCCGGGGAGATGGATGTGGCGGAGTTGCAGGAGTGGTACAAGAAGTTTGTCGTGGAGTGTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS GCA 72 bp | GTGTTCCAGGCTGCCCCTCAGCACGAGGTTCAGGGCTaGCACATACTCCAGGAAGTCAATGGTGTTGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VFQAAPQHEVQG*HILQEVNGVVP Trigger: GGGGACAACACCATTGACTTCCTGGAGTATGTGGCAGCCCTGAACCTCGTGCTGAGGGGCAGCCTGGAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS CAA 72 bp | CTGGCCTCCTCATTGCCCGTGACCTTGAAGAAGCGCTaGAACTCGTGCATGAAGAGCGTCCCACTGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LASSLPVTLKKR*NSCMKSVPLGH Trigger: GTGTCCCAGTGGGACGCTCTTCATGCACGAGTTCAAGCGCTTCTTCAAGGTCACGGGCAATGAGGAGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS CAA 90 bp | ACATACTGGCTGGCCTCCTCATTGCCCGTGACCTTGAAGAAGCGCTaGAACTCGTGCATGAAGAGCGTCCCACTGGGACACTCCACGACA | + |
|
Preference number: 6 (lower is better) Translates to: TYWLASSLPVTLKKR*NSCMKSVPLGHSTT Trigger: TGTCGTGGAGTGTCCCAGTGGGACGCTCTTCATGCACGAGTTCAAGCGCTTCTTCAAGGTCACGGGCAATGAGGAGGCCAGCCAGTATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS TCA 72 bp | TCTTCATTACCCACTTATCGCGACGGGCGCCCTCGATaGACTCGGTCAGAGACAGCTGGCCGTCTCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLPTYRDGRPR*TRSETAGRLHS Trigger: AGAATGGAGACGGCCAGCTGTCTCTGACCGAGTTCATCGAGGGCGCCCGTCGCGATAAGTGGGTAATGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024774.14 |
||
| CDS GCA 72 bp | TCATTGCCCGTGACCTTGAAGAAGCGCTTGAACTCGTaGATGAAGAGCGTCCCACTGGGACACTCCACGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLPVTLKKRLNS*MKSVPLGHSTT Trigger: TGTCGTGGAGTGTCCCAGTGGGACGCTCTTCATGCACGAGTTCAAGCGCTTCTTCAAGGTCACGGGCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS CAA 72 bp | AAGAGCGTCCCACTGGGACACTCCACGACAAACTTCTaGTACCACTCCTGCAACTCCGCCACATCCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSVPLGHSTTNF*YHSCNSATSIS Trigger: GGAGATGGATGTGGCGGAGTTGCAGGAGTGGTACAAGAAGTTTGTCGTGGAGTGTCCCAGTGGGACGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024774.14 ENSMUST00000145462.2 |
||
| CDS GCA 72 bp | TTTGCTCGCCCAGCCTTCACCAGCCAATCTTGGAAGTaGTCTTACAAATGTGTGCGCCTGCGTTTTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FARPAFTSQSWK*SYKCVRLRFGS Trigger: GGAGCCAAAACGCAGGCGCACACATTTGTAAGAGCACTTCCAAGATTGGCTGGTGAAGGCTGGGCGAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
||
| CDS GCA 72 bp | ATGTGTGCGCCTGCGTTTTGGCTCCCTTGCTATTCATaGCATCCTTCTCCAGCCGGTTCACAGACATGTGTA | + |
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Preference number: 6 (lower is better) Translates to: MCAPAFWLPCYS*HPSPAGSQTCV Trigger: TACACATGTCTGTGAACCGGCTGGAGAAGGATGGCATGAATAGCAAGGGAGCCAAAACGCAGGCGCACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145462.2 |
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