Pregenerated sensors for GTDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036890Ensembl transcript IDs: ENSMUST00000049051.13, ENSMUST00000100127.9, ENSMUST00000112810.8, ENSMUST00000130991.8, ENSMUST00000146694.8, ENSMUST00000148279.8, ENSMUST00000154744.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTCAGCTATaGCAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTCTTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SEAATGLWQMALCQL*QAARLGFLCRFSFL Trigger: GAGAAAAGAAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR GCA 90 bp | CAGTTCAGGTGTCTTAAGGACAGGAGAAGCTTCTCTGCAAGCCTCTaGAGAGCGAGTGAAGCCGCTGGTGGATCAGTTCAGGCTAATGAA | + |
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Preference number: 1 (lower is better) Translates to: QFRCLKDRRSFSASL*RASEAAGGSVQANE Trigger: TTCATTAGCCTGAACTGATCCACCAGCGGCTTCACTCGCTCTGCAGAGGCTTGCAGAGAAGCTTCTCCTGTCCTTAAGACACCTGAACTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR GCA 90 bp | GGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTaGCATCGTGTCGGCAGAAAGAAAGAATTCAGGCTCCGTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: GRNSAKCECLKLQFG*HRVGRKKEFRLRVI Trigger: GATGACACGGAGCCTGAATTCTTTCTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR GCA 90 bp | AAATCTGCCTGCCTCTACCTCCCAAGTGCTGGGATTAAAGGTGTGTaGCACCAGCGGCCAGCTTCCAAGAACATCTTAACAACTTTACAG | + |
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Preference number: 1 (lower is better) Translates to: KSACLYLPSAGIKGV*HQRPASKNILTTLQ Trigger: CTGTAAAGTTGTTAAGATGTTCTTGGAAGCTGGCCGCTGGTGGCACACACCTTTAATCCCAGCACTTGGGAGGTAGAGGCAGGCAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CCA 90 bp | ACTTATCTGTTGGCTCCCCTGTGGTTCACCTGGATGCAAACGTGGTaGCGCTTCAGAAAGCTATTTCATCTGCTGGTCAAAAGAGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: TYLLAPLWFTWMQTW*RFRKLFHLLVKREW Trigger: CCACTCTCTTTTGACCAGCAGATGAAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CCA 90 bp | TGGACTTATCTGTTGGCTCCCCTGTGGTTCACCTGGATGCAAACGTaGTGGCGCTTCAGAAAGCTATTTCATCTGCTGGTCAAAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: WTYLLAPLWFTWMQT*WRFRKLFHLLVKRE Trigger: CTCTCTTTTGACCAGCAGATGAAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CCA 90 bp | ACCGTGGTGTGTCTGATGAATTGGACTTATCTGTTGGCTCCCCTGTaGTTCACCTGGATGCAAACGTGGTGGCGCTTCAGAAAGCTATTT | + |
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Preference number: 1 (lower is better) Translates to: TVVCLMNWTYLLAPL*FTWMQTWWRFRKLF Trigger: AAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACACACCACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CCA 90 bp | TGTCTGATGAATTGGACTTATCTGTTGGCTCCCCTGTGGTTCACCTaGATGCAAACGTGGTGGCGCTTCAGAAAGCTATTTCATCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: CLMNWTYLLAPLWFT*MQTWWRFRKLFHLL Trigger: CAGCAGATGAAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CCA 90 bp | GATCAGTTCAGGCTAATGAAGTTCACCGTGGTGTGTCTGATGAATTaGACTTATCTGTTGGCTCCCCTGTGGTTCACCTGGATGCAAACG | + |
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Preference number: 1 (lower is better) Translates to: DQFRLMKFTVVCLMN*TYLLAPLWFTWMQT Trigger: CGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACACACCACGGTGAACTTCATTAGCCTGAACTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR TCA 90 bp | GACATGTGTAACCATCATAACGTCTCTAGGAATCTGTATTTAATTTaGGTTGGGGTGGTGGCAGGGATTGGAGATCTGAAGCCGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: DMCNHHNVSRNLYLI*VGVVAGIGDLKPPQ Trigger: CTGTGGCGGCTTCAGATCTCCAATCCCTGCCACCACCCCAACTCAAATTAAATACAGATTCCTAGAGACGTTATGATGGTTACACATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR TCA 90 bp | TCCCATCTCCTTCTTTCCCTCAATAATGAGTTTGAGTCACTTCTATaGAGAAAGATGAACCTTAGCTCAAAGTGTCAAGCTGTTCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: SHLLLSLNNEFESLL*RKMNLSSKCQAVLG Trigger: ACCTAGAACAGCTTGACACTTTGAGCTAAGGTTCATCTTTCTTCATAGAAGTGACTCAAACTCATTATTGAGGGAAAGAAGGAGATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR TCA 90 bp | TATCTTGCAAGTTTCTTTAAGATTAATTCAATGCAAATGGAACTCTaGGAATCATGGGAATACCTGCCAGAGCCCTTATTAATGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: YLASFFKINSMQMEL*ESWEYLPEPLLMPS Trigger: TGAAGGCATTAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGCATTGAATTAATCTTAAAGAAACTTGCAAGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTTCTAGGCCCCGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACGCTCTGTGTCAGCTATaGCAAGCAGCCAGGCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: PLSRPRGPLRTQEGSDDNALCQL*QAARLG Trigger: GCCGAGCCTGGCTGCTTGTCATAGCTGACACAGAGC...GTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACGGGGCCTAGAAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACCTGGCAACCCAGGTAGGTGGTGGCAGGGATTaGAGATCTGAAGCCGCCACA | + |
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Preference number: 2 (lower is better) Translates to: RGPLRTQEGSDDNLATQVGGGRD*RSEAAT Trigger: TGTGGCGGCTTCAGATCTCCAATCCCTGCCACCACC...TACCTGGGTTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGGCCGCCACAGGTTTGTaGCAGATGGCTCTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: AKCECLKLQFGCHRVGRKAATGL*QMALCQ Trigger: CTGACACAGAGCCATCTGCCACAAACCTGTGGCGGC...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGCAGGGATTGGAGATCTaGAGCCGCCACAGGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: AKCECLKLQFGCHRVGRKQGLEI*SRHRFV Trigger: CACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTG...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACCTGGCAACCCAGGTATTTGAAGCTGCAGTTTaGCTGCCATCGTGTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RGPLRTQEGSDDNLATQVFEAAV*LPSCRQ Trigger: CTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAA...TACCTGGGTTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTTCTAGGCCCCGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACTTTGAAGCTGCAGTTTaGCTGCCATCGTGTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PLSRPRGPLRTQEGSDDNFEAAV*LPSCRQ Trigger: CTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAA...GTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACGGGGCCTAGAAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCCAGGGATTGGAGATCTaGAGCCGCCACAGGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: GNPGRNSAKCECLKLQFGQGLEI*SRHRFV Trigger: CACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTG...GCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGTGGGGATACAGAGCTGCTTCGCAGCAGCTGACTACAATTTGCTTCATGCAGGAGAAGCTTCTCTaGAAGCCTCTGCAGAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: QVWGYRAASQQLTTICFMQEKLL*KPLQSE Trigger: CTCGCTCTGCAGAGGCTTGCAGAGAAGCTTCTCCTG...CATGAAGCAAATTGTAGTCAGCTGCTGCGAAGCAGCTCTGTATCCCCACACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGCCGCCACAGGTTTGTaGCAGATGGCTCTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RNSAKCECLKLQFGCHRVAATGL*QMALCQ Trigger: CTGACACAGAGCCATCTGCCACAAACCTGTGGCGGC...GACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR CAA 90 bp | GGATCAGTTCAGGCTAATGAAGTTCACCGTGGTGTGTCTGATGAATaGGACTTATCTGTTGGCTCCCCTGTGGTTCACCTGGATGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GSVQANEVHRGVSDE*DLSVGSPVVHLDAN Trigger: GTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACACACCACGGTGAACTTCATTAGCCTGAACTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CAA 90 bp | CCAGGTGTGGGGATACAGAGCTGCTTCGCAGCAGCTGACTACAATTaGCTTCATGATGTAACAAAGCCATGGGTTTGCCAGATGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: PGVGIQSCFAAADYN*LHDVTKPWVCQMQI Trigger: TATCTGCATCTGGCAAACCCATGGCTTTGTTACATCATGAAGCAAATTGTAGTCAGCTGCTGCGAAGCAGCTCTGTATCCCCACACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGACCGGAAATTCAATGTaGCACCACATATGGGATACA | + |
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Preference number: 2 (lower is better) Translates to: AKCECLKLQFGCHRVGRKTGNSM*HHIWDT Trigger: TGTATCCCATATGTGGTGCCACATTGAATTTCCGGT...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAATGGAACTCTGAGAATCATGGGAATACCTGCCAGAGCCCTTATTAATGCCCAGGTTTGTGGCAGATaGCTCTGTGTCAGCTATGAC | + |
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Preference number: 2 (lower is better) Translates to: ANGTLRIMGIPARALINAQVCGR*LCVSYD Trigger: GTCATAGCTGACACAGAGCCATCTGCCACAAACCTG...GGCATTAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAACCAGTTCAGGTGTCTTAAGGACAGGAGAAGCTTCTCTGCAAGCCTCTCTGGTCAAAAGAGAGTaGCTTCTGTCTCAAGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FKTSSGVLRTGEASLQASLVKRE*LLSQGV Trigger: GACTCCTTGAGACAGAAGCCACTCTCTTTTGACCAG...AGAGGCTTGCAGAGAAGCTTCTCCTGTCCTTAAGACACCTGAACTGGTTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGGAACTCTGAGAATCATGGGAATACCTGCCAGAGCCCTTATTAATGCCAATCTGTATTTAATTTaGGTTGGGGTGGTGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ANGTLRIMGIPARALINANLYLI*VGVVAG Trigger: CCCTGCCACCACCCCAACTCAAATTAAATACAGATT...GGCATTAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGACTTCACTCACTGAATCTGCCATGTTTGTCCGAATTCCAGCTGTTTATCATGCAAATGGAACTCTaGGAATCATGGGAATACCTG | + |
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Preference number: 2 (lower is better) Translates to: RGLHSLNLPCLSEFQLFIMQMEL*ESWEYL Trigger: CAGGTATTCCCATGATTCTCAGAGTTCCATTTGCAT...GATAAACAGCTGGAATTCGGACAAACATGGCAGATTCAGTGAGTGAAGTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAACCAAGTGTGAGTGTTTaGAGCTGCAGTTTGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LKQVSRVHFMDERTSLTEPSVSV*SCSLAA Trigger: GGCAGCCAAACTGCAGCTTCAAACACTCACACTTGG...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGGAGCTTCCGAAAGCTATTTCATCTaGTGGTCAAAAGAGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LYSHINRKCLSGCSSGASESYFI*WSKESG Trigger: GCCACTCTCTTTTGACCAGCAGATGAAATAGCTTTC...GGAAGCTCCTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGGAGCTTCCATCTATGCAGAGAGTTaGGTAAAGTGTCAATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LYSHINRKCLSGCSSGASIYAES*VKCQCH Trigger: GTGGCATTGACACTTTACCCAACTCTCTGCATAGAT...GGAAGCTCCTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAAAATCTGTATTTAATTTaGGTTGGGGTGGTGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LKQVSRVHFMDERTSLTENLYLI*VGVVAG Trigger: CCCTGCCACCACCCCAACTCAAATTAAATACAGATT...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAATATGGGATACATGAGTaGGGTTATACAACAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LKQVSRVHFMDERTSLTEYGIHE*GYTTGH Trigger: GTGGCCTGTTGTATAACCGCACTCATGTATCCCATA...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR GCA 90 bp | ATCGAACTGCATCTAAAATTATATGAGAGCATGGGAGGTAGTAAGTGGTGTTCAATATGTGCTCATCTATaGAGAGAGTTGGGTAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: IELHLKLYESMGGSKWCSICAHL*RELGKV Trigger: CACTTTACCCAACTCTCTGCATAGATGAGCACATAT...TGAACACCACTTACTACCTCCCATGCTCTCATATAATTTTAGATGCAGTTCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR GCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAATTGCTAAAAGAAAAGTaGTACAGCAGCCCTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LKQVSRVHFMDERTSLTELLKEK*YSSPLP Trigger: AGGCAAAGGGCTGCTGTAGCACTTTTCTTTTAGCAA...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAACTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGAAAGCTATCACTATATaGCCACTCCTTCTTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LNNFTVTLIENVSLAALQKAITI*PLLLVD Trigger: ATCCACAAGAAGGAGTGGCCATATAGTGATAGCTTT...CTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAGTTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAACTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGTTTGAGTCACTTCTATaGAGAAAGATGAACCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LNNFTVTLIENVSLAALQFESLL*RKMNLS Trigger: GCTAAGGTTCATCTTTCTTCATAGAAGTGACTCAAA...CTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAGTTGTTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAACAACTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGTCATCAAGCAAAAAGTaGCCAGCATCACATTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LNNFTVTLIENVSLAALQSSSKK*PASHSK Trigger: TTTTGAATGTGATGCTGGGCACTTTTTGCTTGATGA...CTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAGTTGTTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR-3UTR CAA 90 bp | CCTCTTTCTAGGCCCCGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACGAAGCCGCCACAGGTTaGTGGCAGATGGCTCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PLSRPRGPLRTQEGSDDNEAATG*WQMALC Trigger: ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTC...GTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACGGGGCCTAGAAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCTTTCTAGGCCCCGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACGCCAAGTGTGAGTGTTaGAAGCTGCAGTTTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: PLSRPRGPLRTQEGSDDNAKCEC*KLQFGC Trigger: GCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC...GTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACGGGGCCTAGAAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR GCA 72 bp | TGTCTTAAGGACAGGAGAAGCTTCTCTGCAAGCCTCTaGAGAGCGAGTGAAGCCGCTGGTGGATCAGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: CLKDRRSFSASL*RASEAAGGSVQ Trigger: CTGAACTGATCCACCAGCGGCTTCACTCGCTCTGCAGAGGCTTGCAGAGAAGCTTCTCCTGTCCTTAAGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTaGCTCTACCTCCCAAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LYLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTTGGGAGGTAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR CCA 72 bp | CTGTTGGCTCCCCTGTGGTTCACCTGGATGCAAACGTaGTGGCGCTTCAGAAAGCTATTTCATCTGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: LLAPLWFTWMQT*WRFRKLFHLLV Trigger: GACCAGCAGATGAAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| 3UTR TCA 72 bp | GCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTaGAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: ATQVETQPSVSV*SCSLAAIVSAE Trigger: TTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| 3UTR TCA 72 bp | AGCATTCTGATCCTCTTTCTAGGCCCCGTGGCCCTTTaGGGACACAAGAAGGCTCCGATGATAACCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SILILFLGPVAL*GHKKAPMITWQ Trigger: TTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACGGGGCCTAGAAAGAGGATCAGAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR GCA 72 bp | TGCCTCTACCTCCCAAGTGCTGGGATTAAAGGTGTGTaGCACCAGCGGCCAGCTTCCAAGAACATCTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: CLYLPSAGIKGV*HQRPASKNILT Trigger: TGTTAAGATGTTCTTGGAAGCTGGCCGCTGGTGGCACACACCTTTAATCCCAGCACTTGGGAGGTAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATGGAACTCTGAGAATCATGGGAATACCTGCCAGAGCCCTTATTAATGCCGAAGCCGCCACAGGTTaGTGGCAGATGGCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ANGTLRIMGIPARALINAEAATG*WQMALC Trigger: ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTC...GGCATTAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR CCA 72 bp | TTGGCTCCCCTGTGGTTCACCTGGATGCAAACGTGGTaGCGCTTCAGAAAGCTATTTCATCTGCTGGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAPLWFTWMQTW*RFRKLFHLLVK Trigger: TTTGACCAGCAGATGAAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR CCA 72 bp | TGTCTGATGAATTGGACTTATCTGTTGGCTCCCCTGTaGTTCACCTGGATGCAAACGTGGTGGCGCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLMNWTYLLAPL*FTWMQTWWRFR Trigger: TCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR GCA 72 bp | TCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTaGCATCGTGTCGGCAGAAAGAAAGAATTCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAKCECLKLQFG*HRVGRKKEFRL Trigger: GAGCCTGAATTCTTTCTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR CCA 72 bp | AGGCTAATGAAGTTCACCGTGGTGTGTCTGATGAATTaGACTTATCTGTTGGCTCCCCTGTGGTTCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLMKFTVVCLMN*TYLLAPLWFTW Trigger: CCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACACACCACGGTGAACTTCATTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATGGAACTCTGAGAATCATGGGAATACCTGCCAGAGCCCTTATTAATGCCTGCTACAGCAGCCCTTaGCCTACAGCAGCTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ANGTLRIMGIPARALINACYSSP*PTAALR Trigger: TCTCAAAGCTGCTGTAGGCAAAGGGCTGCTGTAGCA...GGCATTAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR CCA 72 bp | AATTGGACTTATCTGTTGGCTCCCCTGTGGTTCACCTaGATGCAAACGTGGTGGCGCTTCAGAAAGCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: NWTYLLAPLWFT*MQTWWRFRKLF Trigger: AAATAGCTTTCTGAAGCGCCACCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGAATCTGTATTTAATTaGAGTTGGGGTGGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNSAKCECLKLQFGCHRVESVFN*SWGGGR Trigger: CCTGCCACCACCCCAACTCAAATTAAATACAGATTC...GACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR GCA 72 bp | ATGTCTCTCTGGCTGCTCTTCAGGAGCTTCCAGTATTaGCGTTATCCTCAATTTCACCTATCGAACTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: MSLWLLFRSFQY*RYPQFHLSNCI Trigger: GATGCAGTTCGATAGGTGAAATTGAGGATAACGGCAATACTGGAAGCTCCTGAAGAGCAGCCAGAGAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGACTTCACTCACTGAATCTGCCATGTTTGTCCGAATTCCAGCTGTTTATCGAATCTGTATTTAATTaGAGTTGGGGTGGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGLHSLNLPCLSEFQLFIESVFN*SWGGGR Trigger: CCTGCCACCACCCCAACTCAAATTAAATACAGATTC...GATAAACAGCTGGAATTCGGACAAACATGGCAGATTCAGTGAGTGAAGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR TCA 72 bp | AACCATCATAACGTCTCTAGGAATCTGTATTTAATTTaGGTTGGGGTGGTGGCAGGGATTGGAGATCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NHHNVSRNLYLI*VGVVAGIGDLK Trigger: CTTCAGATCTCCAATCCCTGCCACCACCCCAACTCAAATTAAATACAGATTCCTAGAGACGTTATGATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR GCA 72 bp | CTTTGCCAGAGAGTCATTAATTTGCTAAAAGAAAAGTaGTACAGCAGCCCTTTGCCTACAGCAGCTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCQRVINLLKEK*YSSPLPTAALR Trigger: TCTCAAAGCTGCTGTAGGCAAAGGGCTGCTGTAGCACTTTTCTTTTAGCAAATTAATGACTCTCTGGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR GCA 72 bp | CTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTaGTCTTCAGGAGCTTCCAGTATTGCCGTTATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LYSHINRKCLSG*SSGASSIAVIL Trigger: GAGGATAACGGCAATACTGGAAGCTCCTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR CCA 72 bp | CATCTAAAATTATATGAGAGCATGGGAGGTAGTAAGTaGTGTTCAACAATAGCATCTCTGGTCCTGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLKLYESMGGSK*CSTIASLVLQR Trigger: TCTTTGCAGGACCAGAGATGCTATTGTTGAACACCACTTACTACCTCCCATGCTCTCATATAATTTTAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR TCA 72 bp | CTTCTTTCCCTCAATAATGAGTTTGAGTCACTTCTATaGAGAAAGATGAACCTTAGCTCAAAGTGTCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLSLNNEFESLL*RKMNLSSKCQA Trigger: AGCTTGACACTTTGAGCTAAGGTTCATCTTTCTTCATAGAAGTGACTCAAACTCATTATTGAGGGAAAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR GCA 72 bp | GTACAAATTAACTTAATAGCAATATGTGCTCATCTATaGAGAGAGTTGGGTAAAGTGTCAATGCCACCTATG | + |
|
Preference number: 3 (lower is better) Translates to: VQINLIAICAHL*RELGKVSMPPM Trigger: CATAGGTGGCATTGACACTTTACCCAACTCTCTGCATAGATGAGCACATATTGCTATTAAGTTAATTTGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR GCA 72 bp | ACCTCAAAAAGCACACTCTCATTCTTGGATGCTGTTTaGTACTCAAACTTCTTTGGCAAGAATTTAGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: TSKSTLSFLDAV*YSNFFGKNLEL Trigger: TAGTTCTAAATTCTTGCCAAAGAAGTTTGAGTAGCAAACAGCATCCAAGAATGAGAGTGTGCTTTTTGAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR GCA 72 bp | TTACCTAACCTCAAAAAGCACACTCTCATTCTTGGATaGTGTTTGCTACTCAAACTTCTTTGGCAAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: LPNLKKHTLILG*CLLLKLLWQEF Trigger: AAATTCTTGCCAAAGAAGTTTGAGTAGCAAACAGCATCCAAGAATGAGAGTGTGCTTTTTGAGGTTAGGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCTGTTTGCTACTCAAACTTCTTTGGCAAGAATTTAGAACTAAATGCATGGAAGATAAAGTTATTTaGAGCACAGCAGAAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GCCLLLKLLWQEFRTKCMEDKVI*STAETE Trigger: CTCTGTTTCTGCTGTGCTCAAAATAACTTTATCTTC...CATGCATTTAGTTCTAAATTCTTGCCAAAGAAGTTTGAGTAGCAAACAGCATCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| 3UTR TCA 72 bp | AGTTTCTTTAAGATTAATTCAATGCAAATGGAACTCTaGGAATCATGGGAATACCTGCCAGAGCCCTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: SFFKINSMQMEL*ESWEYLPEPLL Trigger: TAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGCATTGAATTAATCTTAAAGAAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTACCCTCTGCCCTGGCTaGGGACAAGGCGCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRDWRSEAATGLWQMALCTLCPG*GQGATD Trigger: GTCTGTGGCGCCTTGTCCCCAGCCAGGGCAGAGGGT...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | CGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACCTGGCAACCCAGGTACAAGGCGCCACAGACTaGGATGCAGCAGCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPLRTQEGSDDNLATQVQGATD*DAAASP Trigger: TGGAGATGCTGCTGCATCTCAGTCTGTGGCGCCTTG...TACCTGGGTTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACCTGGCAACCCAGGTAGGCTTTGGGACAGAGTaGGTAGCAGCCACAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLRTQEGSDDNLATQVGFGTE*VAATVH Trigger: GTGTACTGTGGCTGCTACCCACTCTGTCCCAAAGCC...TACCTGGGTTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | GGCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCCAAGGCGCCACAGACTaGGATGCAGCAGCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNPGRNSAKCECLKLQFGQGATD*DAAASP Trigger: TGGAGATGCTGCTGCATCTCAGTCTGTGGCGCCTTG...GCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTTTCACAGTTCTCCGGTaGCTTCTCAGAAACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRDWRSEAATGLWQMALCFTVLR*LLRNPL Trigger: CAGAGGGTTTCTGAGAAGTCACCGGAGAACTGTGAA...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTGCCCCAGTGCAAGACTaGAGAGCCCAGTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLCVSYDKQPGSASSADFAPVQD*RAQCLF Trigger: AAAAAGGCACTGGGCTCTTCAGTCTTGCACTGGGGC...AAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTCGCCACAGACTGAGATaGAGCAGCATCTCCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDWRSEAATGLWQMALCRHRLR*SSISNK Trigger: CTTATTGGAGATGCTGCTGCATCTCAGTCTGTGGCG...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTTTCTAGGCCCCGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACTTCACAGTTCTCCGGTaGCTTCTCAGAAACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSRPRGPLRTQEGSDDNFTVLR*LLRNPL Trigger: CAGAGGGTTTCTGAGAAGTCACCGGAGAACTGTGAA...GTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACGGGGCCTAGAAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | GGCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCGCCCCAGTGCAAGACTaGAGAGCCCAGTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNPGRNSAKCECLKLQFGAPVQD*RAQCLF Trigger: AAAAAGGCACTGGGCTCTTCAGTCTTGCACTGGGGC...GCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGATGTGCAGCGGTCTTTaGGGATCTTCAGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AKCECLKLQFGCHRVGRKMCSGL*GSSAPH Trigger: GTGTGGAGCTGAAGATCCGCAAAGACCGCTGCACAT...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTAGCATCCTCCTTAAGTaGGCTATTTTGTGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDWRSEAATGLWQMALCSILLK*AILCLG Trigger: GCCCAAGCACAAAATAGCCCACTTAAGGAGGATGCT...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGGATAGACCAAGGCTTTaGGACAGAGTGGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKCECLKLQFGCHRVGRKDRPRL*DRVGSS Trigger: GCTGCTACCCACTCTGTCCCAAAGCCTTGGTCTATC...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTAAGTGGGCTATTTTGTaGTTGGGCATGAATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRDWRSEAATGLWQMALCKWAIL*LGMNLL Trigger: GAGCAGATTCATGCCCAAGCACAAAATAGCCCACTT...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTCTTTCTCCACACAGAAGGGTaGTGGGATCAAGAGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSAMTSSQARLPLQIFFLHTEG*WDQEAG Trigger: ACCTGCCTCTTGATCCCAGCACCCTTCTGTGTGGAG...AAAGAAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | GGCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTCTGGATCTTTGTCATaGTCCCACCTGTGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNPGRNSAKCECLKLQFGSGSLS*SHLCGH Trigger: ATGGCCGCACAGGTGGGAGCATGACAAAGATCCAGA...GCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | GGCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCAGTCAGGTTGAGTACTaGGCTTGCAAAGAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNPGRNSAKCECLKLQFGSQVEY*ACKEGP Trigger: AGGACCCTCTTTGCAAGCTCAGTACTCAACCTGACT...GCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGCTTGGCTGTTGAGATaGCAACGTCAGCCATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RNSAKCECLKLQFGCHRVAWLLR*QRQPCT Trigger: TGTGCATGGCTGACGTTGTCATCTCAACAGCCAAGC...GACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTGGAGCCTCCATAAAATaGCTCGATGATGACAATACT | + |
|
Preference number: 4 (lower is better) Translates to: GRDWRSEAATGLWQMALCGASIK*LDDDNT Trigger: AGTATTGTCATCATCGAGGCATTTTATGGAGGCTCC...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGTGGGGATACAGAGCTGCTTCGCAGCAGCTGACTACAATTTGCTTCATGAGTATAAGGCTGCTGTaGGTGCTCTCCAGTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QVWGYRAASQQLTTICFMSIRLL*VLSSAI Trigger: AATGGCACTGGAGAGCACGCACAGCAGCCTTATACT...CATGAAGCAAATTGTAGTCAGCTGCTGCGAAGCAGCTCTGTATCCCCACACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | GGCAACCCAGGTAGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCCACACAGAAGGGTGCTaGGATCAAGAGGCAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNPGRNSAKCECLKLQFGHTEGC*DQEAGF Trigger: AAAACCTGCCTCTTGATCCCAGCACCCTTCTGTGTG...GCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCTACCTGGGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGGGCTGCCCAAGAAAATaGAGCCACTTCACCCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: AKCECLKLQFGCHRVGRKGCPRK*SHFTLI Trigger: TATAAGGGTGAAGTGGCTCCATTTTCTTGGGCAGCC...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| 3UTR CAA 72 bp | TTCACCGTGGTGTGTCTGATGAATTGGACTTATCTGTaGGCTCCCCTGTGGTTCACCTGGATGCAAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTVVCLMNWTYL*APLWFTWMQTW Trigger: CCACGTTTGCATCCAGGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACACACCACGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGCCGAGGACAGAGACATaGAAGTTCAAGTTTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKCECLKLQFGCHRVGRKPRTET*KFKFNC Trigger: GCAGTTAAACTTGAACTTCCATGTCTCTGTCCTCGG...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | ACCGTGGTGTGTCTGATGAATTGGACTTATCTGTTGGCTCCCCTGTGGTTCACCCCAGTGCCATTTCTTTaGAGGAAGAGTGTACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVCLMNWTYLLAPLWFTPVPFL*RKSVQH Trigger: GTGTTGTACACTCTTCCTGCAAAGAAATGGCACTGG...GGTGAACCACAGGGGAGCCAACAGATAAGTCCAATTCATCAGACACACCACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCGGCTTTGGGACAGAGTaGGTAGCAGCCACAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KFNVAPHMGYMSAVIQQAGFGTE*VAATVH Trigger: GTGTACTGTGGCTGCTACCCACTCTGTCCCAAAGCC...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGACTTCACTCACTGAATCTGCCATGTTTGTCCGAATTCCAGCTGTTTATCGCTTGGCTGTTGAGATaGCAACGTCAGCCATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLNLPCLSEFQLFIAWLLR*QRQPCT Trigger: TGTGCATGGCTGACGTTGTCATCTCAACAGCCAAGC...GATAAACAGCTGGAATTCGGACAAACATGGCAGATTCAGTGAGTGAAGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTCTTTAAGTGGGCTATTTTGTaGTTGGGCATGAATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSAMTSSQARLPLQIFFKWAIL*LGMNLL Trigger: GAGCAGATTCATGCCCAAGCACAAAATAGCCCACTT...AAAGAAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTCACAGCTTCCAACATTaGTACTCCAAAGAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WLCVSYDKQPGSASSADFHSFQH*YSKEFM Trigger: CATGAATTCTTTGGAGTAGCAATGTTGGAAGCTGTG...AAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGCACAGCTTCCAACATTaGTACTCCAAAGAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AKCECLKLQFGCHRVGRKHSFQH*YSKEFM Trigger: CATGAATTCTTTGGAGTAGCAATGTTGGAAGCTGTG...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCGATAGACCAAGGCTTTaGGACAGAGTGGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KFNVAPHMGYMSAVIQQADRPRL*DRVGSS Trigger: GCTGCTACCCACTCTGTCCCAAAGCCTTGGTCTATC...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCAGTCAGGTTGAGTACTaGGCTTGCAAAGAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KFNVAPHMGYMSAVIQQASQVEY*ACKEGP Trigger: AGGACCCTCTTTGCAAGCTCAGTACTCAACCTGACT...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | GCAAATGGAACTCTGAGAATCATGGGAATACCTGCCAGAGCCCTTATTAATGCCACTCTTGAGCCGTTTTaGAAGCTGTTCAGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANGTLRIMGIPARALINATLEPF*KLFRCG Trigger: TCCACACCTGAACAGCTTTCAAAACGGCTCAAGAGT...GGCATTAATAAGGGCTCTGGCAGGTATTCCCATGATTCTCAGAGTTCCATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCGTGCGTGCTCTCCAGTaGCATTTCTTTGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFNVAPHMGYMSAVIQQAVRALQ*HFFAGR Trigger: TCTTCCTGCAAAGAAATGGCACTGGAGAGCACGCAC...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCTGCCTTTTTGGCTTCTaGAAATATATCTGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNSAKCECLKLQFGCHRVCLFGF*KYIWCV Trigger: GACACACCAGATATATTTTCAGAAGCCAAAAAGGCA...GACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGAATCTGTATTTAATGTGCAGCGGTCTTTaGGGATCTTCAGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CDAEDMCNHHNVSRNLYLMCSGL*GSSAPH Trigger: GTGTGGAGCTGAAGATCCGCAAAGACCGCTGCACAT...TAAATACAGATTCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGAATCTGTATTTATCTGGATCTTTGTCATaGTCCCACCTGTGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CDAEDMCNHHNVSRNLYLSGSLS*SHLCGH Trigger: ATGGCCGCACAGGTGGGAGCATGACAAAGATCCAGA...TAAATACAGATTCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGAAAGCTATTTCATCTGCTGGTCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTGCGTGCTCTCCAGTaGCATTTCTTTGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRKLFHLLVKREWLLSQGVRALQ*HFFAGR Trigger: TCTTCCTGCAAAGAAATGGCACTGGAGAGCACGCAC...TCCTTGAGACAGAAGCCACTCTCTTTTGACCAGCAGATGAAATAGCTTTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTTCACTCACTGAATCTGCCATGTTTGTCCGAATTCCAGCTGTTTATCAGCATCCTCCTTAAGTaGGCTATTTTGTGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLHSLNLPCLSEFQLFISILLK*AILCLG Trigger: GCCCAAGCACAAAATAGCCCACTTAAGGAGGATGCT...GATAAACAGCTGGAATTCGGACAAACATGGCAGATTCAGTGAGTGAAGTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCTACATGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGACCGAGGACAGAGACATaGAAGTTCAAGTTTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLHVMPRTCVTIITSLGPRTET*KFKFNC Trigger: GCAGTTAAACTTGAACTTCCATGTCTCTGTCCTCGG...TCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACATGTAGGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAAACCAGTTCAGGTGTCTTAAGGACAGGAGAAGCTTCTCTGCAAGCCTCTGGAGCCTCCATAAAATaGCTCGATGATGACAATACT | + |
|
Preference number: 4 (lower is better) Translates to: FKTSSGVLRTGEASLQASGASIK*LDDDNT Trigger: AGTATTGTCATCATCGAGGCATTTTATGGAGGCTCC...AGAGGCTTGCAGAGAAGCTTCTCCTGTCCTTAAGACACCTGAACTGGTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTCTTTACAGGATACACCAACTaGTTTTCATGGAAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSAMTSSQARLPLQIFFTGYTN*FSWKYK Trigger: CTTATACTTCCATGAAAACCAGTTGGTGTATCCTGT...AAAGAAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CCA 90 bp | TCCGTGTCATCCAGTACAAAGGATAAAAACGGATTCAACCGGAAATTCAATGTGCACACAGAAGGGTGCTaGGATCAAGAGGCAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSSTKDKNGFNRKFNVHTEGC*DQEAGF Trigger: AAAACCTGCCTCTTGATCCCAGCACCCTTCTGTGTG...CACATTGAATTTCCGGTTGAATCCGTTTTTATCCTTTGTACTGGATGACACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGAATCTGTATTTAGGCTGCCCAAGAAAATaGAGCCACTTCACCCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: CDAEDMCNHHNVSRNLYLGCPRK*SHFTLI Trigger: TATAAGGGTGAAGTGGCTCCATTTTCTTGGGCAGCC...TAAATACAGATTCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CCA 90 bp | ATCGAACTGCATCTAAAATTATATGAGAGCATGGGAGGTAGTAAGTGGTGTTCAGTAAATCCAGTTCTGTaGTCAGGCACACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IELHLKLYESMGGSKWCSVNPVL*SGTQQQ Trigger: CTGCTGCTGTGTGCCTGACCACAGAACTGGATTTAC...TGAACACCACTTACTACCTCCCATGCTCTCATATAATTTTAGATGCAGTTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR GCA 90 bp | TCCGTGTCATCCAGTACAAAGGATAAAAACGGATTCAACCGGAAATTCAATGTGCCAGTGCCATTTCTTTaGAGGAAGAGTGTACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSSTKDKNGFNRKFNVPVPFL*RKSVQH Trigger: GTGTTGTACACTCTTCCTGCAAAGAAATGGCACTGG...CACATTGAATTTCCGGTTGAATCCGTTTTTATCCTTTGTACTGGATGACACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112810.8 |
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| CDS-3UTR CCA 90 bp | AGTCTCCTACATGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGAACAGGATACACCAACTaGTTTTCATGGAAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHVMPRTCVTIITSLGTGYTN*FSWKYK Trigger: CTTATACTTCCATGAAAACCAGTTGGTGTATCCTGT...TCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACATGTAGGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAAAGATCCTTAGGCCTGTaGTCAGGAATCAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQVSRVHFMDERTSLTERSLGL*SGISFR Trigger: CCTGAAGCTGATTCCTGATCACAGGCCTAAGGATCT...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAACGCCACAGACTGAGATaGAGCAGCATCTCCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKQVSRVHFMDERTSLTERHRLR*SSISNK Trigger: CTTATTGGAGATGCTGCTGCATCTCAGTCTGTGGCG...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAAAGTATAAGGCTGCTGTaGGTGCTCTCCAGTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVSRVHFMDERTSLTESIRLL*VLSSAI Trigger: AATGGCACTGGAGAGCACGCACAGCAGCCTTATACT...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112810.8 |
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| 3UTR CAA 72 bp | AGTAGTTACCTAACCTCAAAAAGCACACTCTCATTCTaGGATGCTGTTTGCTACTCAAACTTCTTTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSYLTSKSTLSF*DAVCYSNFFGK Trigger: CTTGCCAAAGAAGTTTGAGTAGCAAACAGCATCCAAGAATGAGAGTGTGCTTTTTGAGGTTAGGTAACTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | CTTAACAACTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGTGTAGTGCTCACTGCTaGGAATATTCTGTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNNFTVTLIENVSLAALQCSAHC*EYSVRS Trigger: ACTTCTCACAGAATATTCCCAGCAGTGAGCACTACA...CTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAGTTGTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR TCA 90 bp | CTTAACAACTTTACAGTCACATTAATAGAAAATGTCTCTCTGGCTGCTCTTCAGAGAAAAGAGATGATCTaGGTTCTGAAGTCCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNNFTVTLIENVSLAALQRKEMI*VLKSNH Trigger: GTGATTGGACTTCAGAACTCAGATCATCTCTTTTCT...CTGAAGAGCAGCCAGAGAGACATTTTCTATTAATGTGACTGTAAAGTTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAATGTAGTGCTCACTGCTaGGAATATTCTGTGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVSRVHFMDERTSLTECSAHC*EYSVRS Trigger: ACTTCTCACAGAATATTCCCAGCAGTGAGCACTACA...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112810.8 |
||
| 3UTR CAA 72 bp | AACCTCAAAAAGCACACTCTCATTCTTGGATGCTGTTaGCTACTCAAACTTCTTTGGCAAGAATTTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NLKKHTLILGCC*LLKLLWQEFRT Trigger: AGTTCTAAATTCTTGCCAAAGAAGTTTGAGTAGCAAACAGCATCCAAGAATGAGAGTGTGCTTTTTGAGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
||
| CDS-3UTR TCA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAATGCCTTTTTGGCTTCTaGAAATATATCTGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKQVSRVHFMDERTSLTECLFGF*KYIWCV Trigger: GACACACCAGATATATTTTCAGAAGCCAAAAAGGCA...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS TCA 90 bp | TCAGTTTTCCCAGATCAGGCCGAAGGGCAGCCAGTTCAGTCAGGTTaGGTACTGAGCTTGCAAAGAGGGTCCTGTAGTGCTCACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVFPDQAEGQPVQSG*VLSLQRGSCSAHCW Trigger: CCAGCAGTGAGCACTACAGGACCCTCTTTGCAAGCTCAGTACTCAACCTGACTGAACTGGCTGCCCTTCGGCCTGATCTGGGAAAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000112810.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS TCA 90 bp | TCCCAGATCAGGCCGAAGGGCAGCCAGTTCAGTCAGGTTGAGTACTaGGCTTGCAAAGAGGGTCCTGTAGTGCTCACTGCTGGGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: SQIRPKGSQFSQVEY*ACKEGPVVLTAGNI Trigger: AATATTCCCAGCAGTGAGCACTACAGGACCCTCTTTGCAAGCTCAGTACTCAACCTGACTGAACTGGCTGCCCTTCGGCCTGATCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112810.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
||
| CDS CCA 90 bp | TGTGCAGCGGTCTTTGCGGATCTTCAGCTCCACACAGAAGGGTGCTaGGATCAAGAGGCAGGTTTTCTTTACTCACAGGAAGAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CAAVFADLQLHTEGC*DQEAGFLYSQEESL Trigger: CAGGCTCTCTTCCTGTGAGTAAAGAAAACCTGCCTCTTGATCCCAGCACCCTTCTGTGTGGAGCTGAAGATCCGCAAAGACCGCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGATTGGAGATCTGAAGCCGCCACAGGTTTGTGGCAGATGGCTCTGTGTGGTGTTCATCAGACTTaGATTCACAGTTCTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRDWRSEAATGLWQMALCGVHQT*IHSSPV Trigger: CACCGGAGAACTGTGAATCAAAGTCTGATGAACACC...ACACAGAGCCATCTGCCACAAACCTGTGGCGGCTTCAGATCTCCAATCCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACCTGGCAACCCAGGTATGGGCTATTTTGTGCTaGGGCATGAATCTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RGPLRTQEGSDDNLATQVWAILC*GMNLLT Trigger: TGTGAGCAGATTCATGCCCAAGCACAAAATAGCCCA...TACCTGGGTTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CAA 90 bp | CGTGGCCCTTTGAGGACACAAGAAGGCTCCGATGATAACCTGGCAACCCAGGTATTATGGACTGATGGGTaGTCCAGGGCTTCTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGPLRTQEGSDDNLATQVLWTDG*SRASCS Trigger: TGAACAAGAAGCCCTGGACAACCCATCAGTCCATAA...TACCTGGGTTGCCAGGTTATCATCGGAGCCTTCTTGTGTCCTCAAAGGGCCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS CCA 90 bp | CTCAGCTGGAAAGATCTCAGGATAGACCAAGGCTTTGGGACAGAGTaGGTAGCAGCCACAGTACACAGCTTCCAACATTGCTACTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSWKDLRIDQGFGTE*VAATVHSFQHCYSK Trigger: TTTGGAGTAGCAATGTTGGAAGCTGTGTACTGTGGCTGCTACCCACTCTGTCCCAAAGCCTTGGTCTATCCTGAGATCTTTCCAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCGGCAGAAAGCTTAAGTGGGCTATTTaGTGCTTGGGCATGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKCECLKLQFGCHRVGRKLKWAI*CLGMNL Trigger: CAGATTCATGCCCAAGCACAAAATAGCCCACTTAAG...CTTTCTGCCGACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTATAATATCTGGCCTCTaGCAGAAACTCTTGAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WLCVSYDKQPGSASSADFIISGL*QKLLSR Trigger: ACGGCTCAAGAGTTTCTGCAAGAGGCCAGATATTAT...AAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS GCA 90 bp | AGTGCTCACTGCTGGGAATATTCTGTGAGAAGTATAAGGCTGCTGTaGGTGCTCTCCAGTGCCATTTCTTTGCAGGAAGAGTGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: SAHCWEYSVRSIRLL*VLSSAISLQEECTT Trigger: TGTTGTACACTCTTCCTGCAAAGAAATGGCACTGGAGAGCACGCACAGCAGCCTTATACTTCTCACAGAATATTCCCAGCAGTGAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000100127.9 ENSMUST00000112810.8 ENSMUST00000130991.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
||
| CDS CCA 90 bp | AATACAGATACTCAGCTGGAAAGATCTCAGGATAGACCAAGGCTTTaGGACAGAGTGGGTAGCAGCCACAGTACACAGCTTCCAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: NTDTQLERSQDRPRL*DRVGSSHSTQLPTL Trigger: CAATGTTGGAAGCTGTGTACTGTGGCTGCTACCCACTCTGTCCCAAAGCCTTGGTCTATCCTGAGATCTTTCCAGCTGAGTATCTGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS-3UTR CAA 90 bp | AGAAACTCAGCCAAGTGTGAGTGTTTGAAGCTGCAGTTTGGCTGCCATCGTGTCCTTAAGTGGGCTATTTaGTGCTTGGGCATGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNSAKCECLKLQFGCHRVLKWAI*CLGMNL Trigger: CAGATTCATGCCCAAGCACAAAATAGCCCACTTAAG...GACACGATGGCAGCCAAACTGCAGCTTCAAACACTCACACTTGGCTGAGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
||
| CDS TCA 90 bp | CACAGCTTCCAACATTGCTACTCCAAAGAATTCATGCTTGGCTGTTaGGATGACAACGTCAGCCATGCACAGTACGCGGAAATAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSFQHCYSKEFMLGC*DDNVSHAQYAEIVF Trigger: GAAGACTATTTCCGCGTACTGTGCATGGCTGACGTTGTCATCTCAACAGCCAAGCATGAATTCTTTGGAGTAGCAATGTTGGAAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | TCTGTGTCAGCTATGACAAGCAGCCAGGCTCGGCTTCCTCTGCAGATTTTCTTTGAGCCCAGTGCCTTTTaGGCTTCTGAAAATATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SVSAMTSSQARLPLQIFFEPSAF*ASENIS Trigger: AGATATATTTTCAGAAGCCAAAAAGGCACTGGGCTC...AAAGAAAATCTGCAGAGGAAGCCGAGCCTGGCTGCTTGTCATAGCTGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS GCA 90 bp | GGAATATTCTGTGAGAAGTATAAGGCTGCTGTGCGTGCTCTCCAGTaGCATTTCTTTGCAGGAAGAGTGTACAACACGCAGTCATCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GIFCEKYKAAVRALQ*HFFAGRVYNTQSSN Trigger: ATTAGATGACTGCGTGTTGTACACTCTTCCTGCAAAGAAATGGCACTGGAGAGCACGCACAGCAGCCTTATACTTCTCACAGAATATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000100127.9 ENSMUST00000112810.8 ENSMUST00000130991.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS-3UTR CAA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCTGGGCTATTTTGTGCTaGGGCATGAATCTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KFNVAPHMGYMSAVIQQAWAILC*GMNLLT Trigger: TGTGAGCAGATTCATGCCCAAGCACAAAATAGCCCA...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCCTACATGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGATCCAGTGCCATTTCTTaGCAGGAAGAGTGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: SLLHVMPRTCVTIITSLGSSAIS*QEECTT Trigger: TGTTGTACACTCTTCCTGCAAAGAAATGGCACTGGA...TCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACATGTAGGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112810.8 |
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| CDS TCA 90 bp | CTTCCAACATTGCTACTCCAAAGAATTCATGCTTGGCTGTTGAGATaGCAACGTCAGCCATGCACAGTACGCGGAAATAGTCTTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLLQRIHAWLLR*QRQPCTVRGNSLLY Trigger: GTAAAGAAGACTATTTCCGCGTACTGTGCATGGCTGACGTTGTCATCTCAACAGCCAAGCATGAATTCTTTGGAGTAGCAATGTTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCCCAAAGAATTCATGCTaGGCTGTTGAGATGACAACG | + |
|
Preference number: 5 (lower is better) Translates to: KFNVAPHMGYMSAVIQQAPKNSC*AVEMTT Trigger: CGTTGTCATCTCAACAGCCAAGCATGAATTCTTTGG...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCGAGCCCAGTGCCTTTTaGGCTTCTGAAAATATATCT | + |
|
Preference number: 5 (lower is better) Translates to: KFNVAPHMGYMSAVIQQAEPSAF*ASENIS Trigger: AGATATATTTTCAGAAGCCAAAAAGGCACTGGGCTC...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | AAATTCAATGTGGCACCACATATGGGATACATGAGTGCGGTTATACAACAGGCCACACAGCTTCCAACATaGCTACTCCAAAGAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KFNVAPHMGYMSAVIQQATQLPT*LLQRIH Trigger: ATGAATTCTTTGGAGTAGCAATGTTGGAAGCTGTGT...GGCCTGTTGTATAACCGCACTCATGTATCCCATATGTGGTGCCACATTGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAATTATGGACTGATGGGTaGTCCAGGGCTTCTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKQVSRVHFMDERTSLTELWTDG*SRASCS Trigger: TGAACAAGAAGCCCTGGACAACCCATCAGTCCATAA...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | TGTGATGCCGAGGACATGTGTAACCATCATAACGTCTCTAGGAATCTGTATTTAACACAGCTTCCAACATaGCTACTCCAAAGAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CDAEDMCNHHNVSRNLYLTQLPT*LLQRIH Trigger: ATGAATTCTTTGGAGTAGCAATGTTGGAAGCTGTGT...TAAATACAGATTCCTAGAGACGTTATGATGGTTACACATGTCCTCGGCATCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS GCA 90 bp | GTAAAAGTCTCTCCGAGGACAGAGACATGGAAGTTCAAGTTTAACTaGTTTAGACTCATTAGTATCTTTAAGAACGTCTCTGGATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VKVSPRTETWKFKFN*FRLISIFKNVSGSL Trigger: CAAAGATCCAGAGACGTTCTTAAAGATACTAATGAGTCTAAAGCAGTTAAACTTGAACTTCCATGTCTCTGTCCTCGGAGAGACTTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS-3UTR CAA 90 bp | TTAAAACAAGTATCTCGTGTTCATTTTATGGATGAGAGGACTTCACTCACTGAACCAAAGAATTCATGCTaGGCTGTTGAGATGACAACG | + |
|
Preference number: 5 (lower is better) Translates to: LKQVSRVHFMDERTSLTEPKNSC*AVEMTT Trigger: CGTTGTCATCTCAACAGCCAAGCATGAATTCTTTGG...TTCAGTGAGTGAAGTCCTCTCATCCATAAAATGAACACGAGATACTTGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS-3UTR CAA 90 bp | ACTGTACAAATTAACTTAATAGCAATATGTGCTCATCTATGCAGAGAGTTGGGTTCCAGTGCCATTTCTTaGCAGGAAGAGTGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: TVQINLIAICAHLCRELGSSAIS*QEECTT Trigger: TGTTGTACACTCTTCCTGCAAAGAAATGGCACTGGA...ACCCAACTCTCTGCATAGATGAGCACATATTGCTATTAAGTTAATTTGTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| CDS CCA 90 bp | AATATATCTGGTGTGTCTGTAAAAGTCTCTCCGAGGACAGAGACATaGAAGTTCAAGTTTAACTGCTTTAGACTCATTAGTATCTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NISGVSVKVSPRTET*KFKFNCFRLISIFK Trigger: CTTAAAGATACTAATGAGTCTAAAGCAGTTAAACTTGAACTTCCATGTCTCTGTCCTCGGAGAGACTTTTACAGACACACCAGATATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS TCA 72 bp | ACCCTCTGCCCTGGCTGGGGACAAGGCGCCACAGACTaGGATGCAGCAGCATCTCCAATAAGGCTGAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TLCPGWGQGATD*DAAASPIRLSI Trigger: GATGCTCAGCCTTATTGGAGATGCTGCTGCATCTCAGTCTGTGGCGCCTTGTCCCCAGCCAGGGCAGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS GCA 72 bp | CTGCCCTGGCTGGGGACAAGGCGCCACAGACTGAGATaGAGCAGCATCTCCAATAAGGCTGAGCATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPWLGTRRHRLR*SSISNKAEHPP Trigger: AGGAGGATGCTCAGCCTTATTGGAGATGCTGCTGCATCTCAGTCTGTGGCGCCTTGTCCCCAGCCAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS GCA 72 bp | TCCCACCTGTGCGGCCATGTAATGTGCAGCGGTCTTTaGGGATCTTCAGCTCCACACAGAAGGGTGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SHLCGHVMCSGL*GSSAPHRRVLG Trigger: TCCCAGCACCCTTCTGTGTGGAGCTGAAGATCCGCAAAGACCGCTGCACATTACATGGCCGCACAGGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS TCA 72 bp | AGGCCGAAGGGCAGCCAGTTCAGTCAGGTTGAGTACTaGGCTTGCAAAGAGGGTCCTGTAGTGCTCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPKGSQFSQVEY*ACKEGPVVLTA Trigger: AGCAGTGAGCACTACAGGACCCTCTTTGCAAGCTCAGTACTCAACCTGACTGAACTGGCTGCCCTTCGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112810.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS TCA 72 bp | CCAGATCAGGCCGAAGGGCAGCCAGTTCAGTCAGGTTaGGTACTGAGCTTGCAAAGAGGGTCCTGTAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PDQAEGQPVQSG*VLSLQRGSCSA Trigger: AGCACTACAGGACCCTCTTTGCAAGCTCAGTACTCAACCTGACTGAACTGGCTGCCCTTCGGCCTGATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112810.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS GCA 72 bp | GCGGTCTTTGCGGATCTTCAGCTCCACACAGAAGGGTaGTGGGATCAAGAGGCAGGTTTTCTTTACTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: AVFADLQLHTEG*WDQEAGFLYSQ Trigger: CTGTGAGTAAAGAAAACCTGCCTCTTGATCCCAGCACCCTTCTGTGTGGAGCTGAAGATCCGCAAAGACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS GCA 72 bp | AGCAGTTCCAGCTTCTCCGCCTCCTGTAGTGCTCACTaGTGGGAATATTCTGTGAGAAGTATAAGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSFSASCSAH*WEYSVRSIRLL Trigger: CAGCAGCCTTATACTTCTCACAGAATATTCCCAGCAGTGAGCACTACAGGAGGCGGAGAAGCTGGAACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| CDS CCA 72 bp | AGTTCCAGCTTCTCCGCCTCCTGTAGTGCTCACTGCTaGGAATATTCTGTGAGAAGTATAAGGCTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFSASCSAHC*EYSVRSIRLLC Trigger: GCACAGCAGCCTTATACTTCTCACAGAATATTCCCAGCAGTGAGCACTACAGGAGGCGGAGAAGCTGGAACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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| CDS CAA 72 bp | CTCACAGGAAGAGAGCCTGATTTATGGACTGATGGGTaGTCCAGGGCTTCTTGTTCAGCATCAAGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGREPDLWTDG*SRASCSASRSG Trigger: CCCTGACCTTGATGCTGAACAAGAAGCCCTGGACAACCCATCAGTCCATAAATCAGGCTCTCTTCCTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS GCA 72 bp | TGTGAGAAGTATAAGGCTGCTGTGCGTGCTCTCCAGTaGCATTTCTTTGCAGGAAGAGTGTACAACACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CEKYKAAVRALQ*HFFAGRVYNTQ Trigger: CTGCGTGTTGTACACTCTTCCTGCAAAGAAATGGCACTGGAGAGCACGCACAGCAGCCTTATACTTCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000100127.9 ENSMUST00000112810.8 ENSMUST00000130991.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS CCA 72 bp | GTCTTTGCGGATCTTCAGCTCCACACAGAAGGGTGCTaGGATCAAGAGGCAGGTTTTCTTTACTCACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFADLQLHTEGC*DQEAGFLYSQE Trigger: TTCCTGTGAGTAAAGAAAACCTGCCTCTTGATCCCAGCACCCTTCTGTGTGGAGCTGAAGATCCGCAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000130991.8 |
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| CDS CCA 72 bp | CTGAGCTTGCAAAGAGGGTCCTGTAGTGCTCACTGCTaGGAATATTCTGTGAGAAGTATAAGGCTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLQRGSCSAHC*EYSVRSIRLLC Trigger: GCACAGCAGCCTTATACTTCTCACAGAATATTCCCAGCAGTGAGCACTACAGGACCCTCTTTGCAAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112810.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS GCA 72 bp | GTACTGAGCTTGCAAAGAGGGTCCTGTAGTGCTCACTaGTGGGAATATTCTGTGAGAAGTATAAGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLSLQRGSCSAH*WEYSVRSIRLL Trigger: CAGCAGCCTTATACTTCTCACAGAATATTCCCAGCAGTGAGCACTACAGGACCCTCTTTGCAAGCTCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112810.8 ENSMUST00000146694.8 ENSMUST00000148279.8 ENSMUST00000154744.8 |
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| CDS CCA 72 bp | GCAGCATCTCCAATAAGGCTGAGCATCCTCCTTAAGTaGGCTATTTTGTGCTTGGGCATGAATCTGCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: AASPIRLSILLK*AILCLGMNLLT Trigger: TGTGAGCAGATTCATGCCCAAGCACAAAATAGCCCACTTAAGGAGGATGCTCAGCCTTATTGGAGATGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS TCA 72 bp | CAACATTGCTACTCCAAAGAATTCATGCTTGGCTGTTaGGATGACAACGTCAGCCATGCACAGTACGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QHCYSKEFMLGC*DDNVSHAQYAE Trigger: TTCCGCGTACTGTGCATGGCTGACGTTGTCATCTCAACAGCCAAGCATGAATTCTTTGGAGTAGCAATGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS TCA 72 bp | GCATCCTCCTTAAGTGGGCTATTTTGTGCTTGGGCATaGATCTGTAGTGCTCACTGCTGGGAATATTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSLSGLFCAWA*ICSAHCWEYSV Trigger: CACAGAATATTCCCAGCAGTGAGCACTACAGATTCATGCCCAAGCACAAAATAGCCCACTTAAGGAGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130991.8 |
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| CDS CAA 72 bp | AGGCTGAGCATCCTCCTTAAGTGGGCTATTTTGTGCTaGGGCATGAATCTGCTCACATCAGGAAATCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RLSILLKWAILC*GMNLLTSGNLM Trigger: CATCAGATTTCCTGATGTGAGCAGATTCATGCCCAAGCACAAAATAGCCCACTTAAGGAGGATGCTCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000148279.8 |
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| CDS TCA 72 bp | TTGCTACTCCAAAGAATTCATGCTTGGCTGTTGAGATaGCAACGTCAGCCATGCACAGTACGCGGAAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLLQRIHAWLLR*QRQPCTVRGNS Trigger: ACTATTTCCGCGTACTGTGCATGGCTGACGTTGTCATCTCAACAGCCAAGCATGAATTCTTTGGAGTAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS GCA 72 bp | ATAAGGCTGAGCATCCTCCTTAAGTGGGCTATTTTGTaGTTGGGCATGAATCTGCTCACATCAGGAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: IRLSILLKWAIL*LGMNLLTSGNL Trigger: CAGATTTCCTGATGTGAGCAGATTCATGCCCAAGCACAAAATAGCCCACTTAAGGAGGATGCTCAGCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000148279.8 |
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| CDS CAA 72 bp | CCAATAAGGCTGAGCATCCTCCTTAAGTGGGCTATTTaGTGCTTGGGCATGAATCTGCTCACATCAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PIRLSILLKWAI*CLGMNLLTSGN Trigger: ATTTCCTGATGTGAGCAGATTCATGCCCAAGCACAAAATAGCCCACTTAAGGAGGATGCTCAGCCTTATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 |
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| CDS TCA 72 bp | TTGGGTCTGATAATGCTTTCCAGATCCTTAGGCCTGTaGTCAGGAATCAGCTTCAGGAATTTTCCAATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGLIMLSRSLGL*SGISFRNFPIE Trigger: TTCTATTGGAAAATTCCTGAAGCTGATTCCTGATCACAGGCCTAAGGATCTGGAAAGCATTATCAGACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049051.13 ENSMUST00000112810.8 ENSMUST00000148279.8 |
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| CDS CAA 72 bp | AGACTCATTAGTATCTTTAAGAACGTCTCTGGATCTTaGTCATGCTCCCACGAGAGAATTTGGTTGTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLISIFKNVSGS*SCSHERIWLYP Trigger: TGGATACAACCAAATTCTCTCGTGGGAGCATGACAAAGATCCAGAGACGTTCTTAAAGATACTAATGAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146694.8 |
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| CDS CAA 90 bp | CTGAGTTCTGAAGTCCAATCACGTGCTAAGAAGAATTTTTCAGTGTaGTTTTTAGAGACTGTCAAGCAGAAAGTAAATCCAGTTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSEVQSRAKKNFSV*FLETVKQKVNPVLW Trigger: CCACAGAACTGGATTTACTTTCTGCTTGACAGTCTCTAAAAACAACACTGAAAAATTCTTCTTAGCACGTGATTGGACTTCAGAACTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100127.9 |
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