Pregenerated sensors for GRPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031364Ensembl transcript IDs: ENSMUST00000033730.3
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCATCAGAAGAAGCCCTCACAACTGAGATGGAAAATGAAGCCTaGAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACA | + |
|
Preference number: 1 (lower is better) Translates to: SPSEEALTTEMENEA*RLTLRYNGDWCIWT Trigger: TGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTCTTCTGATGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR GCA 90 bp | AAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATTaGTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTTCGCCT | + |
|
Preference number: 1 (lower is better) Translates to: KNQNFYEMGNLGISH*SIAIHGSTFGCFSP Trigger: AGGCGAAAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAGAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGAGATACAATGGTGATTaGTGCATTTGGACATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SEEALTTEMENEACRLTLRYNGD*CIWTSF Trigger: GAAAGATGTCCAAATGCACCAATCACCATTGTATCT...CAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTCTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATTACAATGGTGATTGGTaGATTTGGACATCTTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: WINKNQNFYEMGNLGISHYNGDW*IWTSFP Trigger: TGGGAAAGATGTCCAAATGCACCAATCACCATTGTA...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR GCA 72 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTaGATTTGGACATCTTTCCCATCCGTCTGTATCACT | + |
|
Preference number: 3 (lower is better) Translates to: ACRLTLRYNGDW*IWTSFPSVCIT Trigger: AGTGATACAGACGGATGGGAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR CCA 72 bp | GAAGCCTGCAGGCTTACTTTGAGATACAATGGTGATTaGTGCATTTGGACATCTTTCCCATCCGTCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: EACRLTLRYNGD*CIWTSFPSVCI Trigger: GATACAGACGGATGGGAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR TCA 72 bp | GACATCTTTCCCATCCGTCTGTATCACTCATCCCCCTaGAGAGTCTTCAGAAGATATAGAGACAACAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: DIFPIRLYHSSP*RVFRRYRDNNQ Trigger: TTGATTGTTGTCTCTATATCTTCTGAAGACTCTTCAGGGGGATGAGTGATACAGACGGATGGGAAAGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR TCA 72 bp | CAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTaGGATACAATGGTGATTGGTGCATTTGGACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QLRWKMKPAGLL*DTMVIGAFGHL Trigger: AAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR GCA 72 bp | AATTTCTATGAAATGGGAAATCTGGGCATAAGCCATTaGTCCATAGCCATACATGGGTCTACATTTGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NFYEMGNLGISH*SIAIHGSTFGC Trigger: GCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAGATTTCCCATTTCATAGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR CCA 72 bp | AAATCTGGGCATAAGCCATTGCTCCATAGCCATACATaGGTCTACATTTGGTTGCTTTTCGCCTTAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: KSGHKPLLHSHT*VYIWLLFALTF Trigger: AAATGTTAAGGCGAAAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR CCA 72 bp | AAGCCATTGCTCCATAGCCATACATGGGTCTACATTTaGTTGCTTTTCGCCTTAACATTTTCTATTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KPLLHSHTWVYI*LLFALTFSIEC Trigger: ACACTCAATAGAAAATGTTAAGGCGAAAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATGTGGGGCTTGGTGCTTaGAATAATAATTTCCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: WINKNQNFYEMGNLGISHVGLGA*NNNFQF Trigger: AAATTGGAAATTATTATTCAAAGCACCAAGCCCCAC...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCTCACACAGGAGTTGGTaGAGGCCAGGAGGCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFSHRSW*RPGGGH Trigger: GTGCCCGCCTCCTGGCCTTCACCAACTCCTGTGTGA...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATAAGCCATTGCTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTCAGCCAGGTACTTGCTaGCATCCACAGGGGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGISHCSIAIHGSTFGCFQPGTC*HPQGRM Trigger: CATGCGCCCCTGTGGATGCCAGCAAGTACCTGGCTG...AAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCTGTCAGCCAGGTACTTaGTGGCATCCACAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFCQPGT*WHPQGR Trigger: GCGCCCCTGTGGATGCCAGCAAGTACCTGGCTGACA...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CATCCCCCTGAAGAGTCTTCAGAAGATATAGAGACAACAATCAATCTCAGGGCCAGGGCATGGGATGCCTaGATATCCATTGGCCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HPPEESSEDIETTINLRARAWDA*ISIGRT Trigger: TGTACGGCCAATGGATATCCAGGCATCCCATGCCCT...GGCCCTGAGATTGATTGTTGTCTCTATATCTTCTGAAGACTCTTCAGGGGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATAAGCCATTGCTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTACACCAGTACTGTCTTaGCAAGCCGCTTCCGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGISHCSIAIHGSTFGCFTPVLS*QAASGI Trigger: AATCCCGGAAGCGGCTTGCCAAGACAGTACTGGTGT...AAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR TCA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTATGGCAGCAGAGAAGTTaGGTGTTGAACTGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSISGPLDICRTIPGVPLWQQRS*VLNCFL Trigger: CAGGAAGCAGTTCAACACTCAACTTCTCTGCTGCCA...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR GCA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTATGGTACTTCTGCCTGTaGTGTGGGACCTGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QSISGPLDICRTIPGVPLWYFCL*CGTCSS Trigger: TGATGAACAGGTCCCACAGCACAGGCAGAAGTACCA...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGAGATACATGCTGGTGACAAAGTaGAGCATGGAGGTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EALTTEMENEACRLTLRYMLVTK*SMEVST Trigger: AGTGGACACCTCCATGCTCCACTTTGTCACCAGCAT...GTATCTCAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCAGGAGGTCATGCAGGTaGTACTTCTGCCTGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFRRSCR*YFCLCC Trigger: ACAGCACAGGCAGAAGTACCACCTGCATGACCTCCT...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR GCA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTAGTTTGCAGCCAATTCTaGCAAATAGCCACCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSISGPLDICRTIPGVPLVCSQF*QIATCQ Trigger: CTGACAGGTGGCTATTTGGCAGAATTGGCTGCAAAC...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCGACAGACACCCCCACTaGAGTAAGTTGTATAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFDRHPH*SKLYKG Trigger: CCCTTTATACAACTTACTTCAGTGGGGGTGTCTGTC...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATAAGCCATTGCTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTTGCCTGGATATCCATTaGCCGTACAATGGCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGISHCSIAIHGSTFGCFCLDIH*PYNGFV Trigger: TACAAAGCCATTGTACGGCCAATGGATATCCAGGCA...AAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTAATCTTCATCAGGGCATaGGATGCCTGGATATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QSISGPLDICRTIPGVPLIFIRA*DAWISI Trigger: AATGGATATCCAGGCATCCCATGCCCTGATGAAGAT...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CATCCCCCTGAAGAGTCTTCAGAAGATATAGAGACAACAATCAATCTCAGGGCCAGAGATGATCGCCAGTaGGATAACGTAGAAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPPEESSEDIETTINLRARDDRQ*DNVENQ Trigger: CTGGTTTTCTACGTTATCCCACTGGCGATCATCTCT...GGCCCTGAGATTGATTGTTGTCTCTATATCTTCTGAAGACTCTTCAGGGGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCAGATCAAAGCAGCTTTaGGACAGATCTTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFRSKQL*DRSSSG Trigger: CCCTGATGAAGATCTGTCTCAAAGCTGCTTTGATCT...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGAGATACTCAGATTTCGGGCAATaGAGTAGTAGTAGACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EALTTEMENEACRLTLRYSDFGQ*SSSRQR Trigger: TCTCTGTCTACTACTACTTCATTGCCCGAAATCTGA...GTATCTCAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCAGAAAACACAGCCTCTaGGATGGCCAACAACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFRKHSL*DGQQHR Trigger: TCTATGTTGTTGGCCATCCCAGAGGCTGTGTTTTCT...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATAAGCCATTGCTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTAAGGAAGCCATGGAATaGATTTTAGGGTGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGISHCSIAIHGSTFGCFKEAME*ILGCSS Trigger: TGAGCTACACCCTAAAATCCATTCCATGGCTTCCTT...AAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR TCA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATAACGGTACAGGTAGATaGCATGGTTGGGGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WINKNQNFYEMGNLGISHNGTGR*HGWGAS Trigger: GCTGGCTCCCCAACCATGTCATCTACCTGTACCGTT...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGGATAAGCCCATAAACTaGAGGGATGACATAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEEALTTEMENEACRLTLDKPIN*RDDIDE Trigger: TTCATCTATGTCATCCCTGCAGTTTATGGGCTTATC...CAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATCTTCTGCCTGTGCTGTaGGACCTGTTCATCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WINKNQNFYEMGNLGISHLLPVL*DLFIRP Trigger: TGGCCTGATGAACAGGTCCCACAGCACAGGCAGAAG...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATAGAGATGAACAGGTTTaGCACGTTTCGCATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: WINKNQNFYEMGNLGISHRDEQV*HVSHGL Trigger: AAGTCCATGCGAAACGTGCCAAACCTGTTCATCTCT...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CCA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATTTGGTATCTTTCACATaGAAGGGGTGGAGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WINKNQNFYEMGNLGISHLVSFT*KGWRSE Trigger: TTCTGACCTCCACCCCTTCCATGTGAAAGATACCAA...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS TCA 90 bp | TGGAGGTGTCCACTTCAGAGTAGTGGTAGGAACGGTACAGGTAGATaGCATGGTTGGGGAGCCAGCAGAAGGCAAAGAGGCCCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: WRCPLQSSGRNGTGR*HGWGASRRQRGPQT Trigger: TGTTTGTGGGCCTCTTTGCCTTCTGCTGGCTCCCCAACCATGTCATCTACCTGTACCGTTCCTACCACTACTCTGAAGTGGACACCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTACTGTCAGCCAGGTACTaGCTGGCATCCACAGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QSISGPLDICRTIPGVPLLSARY*LASTGA Trigger: CGCCCCTGTGGATGCCAGCAAGTACCTGGCTGACAG...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTAGGGTTCACACAGGAGTaGGTGAAGGCCAGGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSISGPLDICRTIPGVPLGFTQE*VKARRR Trigger: CCGCCTCCTGGCCTTCACCAACTCCTGTGTGAACCC...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS GCA 90 bp | CCAGATCAAAGCAGCTTTGAGACAGATCTTCATCAGGGCATGGGATaGCTGGATATCCATTGGCCGTACAATGGCTTTGTACCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PDQSSFETDLHQGMG*LDIHWPYNGFVPVS Trigger: GCTGACAGGTACAAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGCTGCTTTGATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CATCCCCCTGAAGAGTCTTCAGAAGATATAGAGACAACAATCAATCTCAGGGCCAACACCAGTACTGTCTaGGCAAGCCGCTTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HPPEESSEDIETTINLRANTSTV*ASRFRD Trigger: ATCCCGGAAGCGGCTTGCCAAGACAGTACTGGTGTT...GGCCCTGAGATTGATTGTTGTCTCTATATCTTCTGAAGACTCTTCAGGGGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | GAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGAGATACGAGGGGTTAGTGCTCTaGAAGGAGGTCATGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EALTTEMENEACRLTLRYEGLVL*KEVMQV Trigger: CACCTGCATGACCTCCTTCAAGAGCACTAACCCCTC...GTATCTCAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 90 bp | ATCAAAGCAGCTTTGAGACAGATCTTCATCAGGGCATGGGATGCCTaGATATCCATTGGCCGTACAATGGCTTTGTACCTGTCAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IKAALRQIFIRAWDA*ISIGRTMALYLSAD Trigger: GTCAGCTGACAGGTACAAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGCTGCTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 90 bp | ACAATCCAGATCAAAGCAGCTTTGAGACAGATCTTCATCAGGGCATaGGATGCCTGGATATCCATTGGCCGTACAATGGCTTTGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TIQIKAALRQIFIRA*DAWISIGRTMALYL Trigger: CAGGTACAAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGCTGCTTTGATCTGGATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 90 bp | GGTATCTTTCACATGGAAGGGGTGGAGGTCAGAAAACACAGCCTCTaGGATGGCCAACAACATAGAGACAATCCAGATCAAAGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GIFHMEGVEVRKHSL*DGQQHRDNPDQSSF Trigger: AAAGCTGCTTTGATCTGGATTGTCTCTATGTTGTTGGCCATCCCAGAGGCTGTGTTTTCTGACCTCCACCCCTTCCATGTGAAAGATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 90 bp | GCACAACTAATGAAGGTTTGGTTGGTATCTTTCACATGGAAGGGGTaGAGGTCAGAAAACACAGCCTCTGGGATGGCCAACAACATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AQLMKVWLVSFTWKG*RSENTASGMANNIE Trigger: CTCTATGTTGTTGGCCATCCCAGAGGCTGTGTTTTCTGACCTCCACCCCTTCCATGTGAAAGATACCAACCAAACCTTCATTAGTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | GAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGAGATACACGTTTCGCATGGACTaGACCGTGCAGAAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EALTTEMENEACRLTLRYTFRMD*TVQKIL Trigger: CAAGATCTTCTGCACGGTCAAGTCCATGCGAAACGT...GTATCTCAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATAAGCCATTGCTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTCTGGCAGCAGAGAAGTaGAGTGTTGAACTGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGISHCSIAIHGSTFGCFLAAEK*SVELLP Trigger: AGGAAGCAGTTCAACACTCAACTTCTCTGCTGCCAG...AAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS GCA 90 bp | CGTGATGTTGCCAATAAGACCTATCACGATGATAAGCCCATAAACTaGAGGGATGACATAGATGAAGCCCGGGTGAAACCAGTTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RDVANKTYHDDKPIN*RDDIDEARVKPVVH Trigger: ATGGACAACTGGTTTCACCCGGGCTTCATCTATGTCATCCCTGCAGTTTATGGGCTTATCATCGTGATAGGTCTTATTGGCAACATCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | GCCTGCAGGCTTACTTTGAGATACAATGGTGATTGGTGCATTTGGACATCTTTCACCGTGCAGAAGATCTaGATGAGCGTGATGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACRLTLRYNGDWCIWTSFTVQKI*MSVMLP Trigger: TGGCAACATCACGCTCATCAAGATCTTCTGCACGGT...GAAAGATGTCCAAATGCACCAATCACCATTGTATCTCAAAGTAAGCCTGCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGAAGCCCTCACAACTGAGATGGAAAATGAAGCCTGCAGGCTTACTTTGATGCCTGGATATCCATaGGCCGTACAATGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SEEALTTEMENEACRLTLMPGYP*AVQWLC Trigger: ACAAAGCCATTGTACGGCCAATGGATATCCAGGCAT...CAAAGTAAGCCTGCAGGCTTCATTTTCCATCTCAGTTGTGAGGGCTTCTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CAATCAATCTCAGGGCCCCTGGACATCTGTAGAACAATACCAGGAGTTCCTTTACAGATCAAAGCAGCTTaGAGACAGATCTTCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSISGPLDICRTIPGVPLQIKAA*RQIFIR Trigger: CCTGATGAAGATCTGTCTCAAAGCTGCTTTGATCTG...TAAAGGAACTCCTGGTATTGTTCTACAGATGTCCAGGGGCCCTGAGATTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATAAGCCATTGCTCCATAGCCATACATGGGTCTACATTTGGTTGCTTTATAAAGGGGATCAGTTaGCAGCCAATTCTGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGISHCSIAIHGSTFGCFIKGIS*QPILPN Trigger: ATTTGGCAGAATTGGCTGCAAACTGATCCCCTTTAT...AAAGCAACCAAATGTAGACCCATGTATGGCTATGGAGCAATGGCTTATGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | CATCCCCCTGAAGAGTCTTCAGAAGATATAGAGACAACAATCAATCTCAGGGCCTTCTTGACATGTATATaGCCTTCCACGGGAAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: HPPEESSEDIETTINLRAFLTCI*PSTGRL Trigger: CAATCTTCCCGTGGAAGGCAATATACATGTCAAGAA...GGCCCTGAGATTGATTGTTGTCTCTATATCTTCTGAAGACTCTTCAGGGGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS-3UTR CAA 90 bp | TGGATTAACAAGAATCAGAATTTCTATGAAATGGGAAATCTGGGCATAAGCCATGATTCGATCTGCTTCTaGACATGTATATTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WINKNQNFYEMGNLGISHDSICF*TCILPS Trigger: GGAAGGCAATATACATGTCAAGAAGCAGATCGAATC...ATGGCTTATGCCCAGATTTCCCATTTCATAGAAATTCTGATTCTTGTTAATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | CCAATTCTGCCAAATAGCCACCTGTCAGCCAGGTACTaGCTGGCATCCACAGGGGCGCATGTCACCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PILPNSHLSARY*LASTGAHVTSS Trigger: GCTGCTGGTGACATGCGCCCCTGTGGATGCCAGCAAGTACCTGGCTGACAGGTGGCTATTTGGCAGAATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS GCA 72 bp | CAATTCTGCCAAATAGCCACCTGTCAGCCAGGTACTTaGTGGCATCCACAGGGGCGCATGTCACCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QFCQIATCQPGT*WHPQGRMSPAA Trigger: TGCTGCTGGTGACATGCGCCCCTGTGGATGCCAGCAAGTACCTGGCTGACAGGTGGCTATTTGGCAGAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS TCA 72 bp | CCACTTCAGAGTAGTGGTAGGAACGGTACAGGTAGATaGCATGGTTGGGGAGCCAGCAGAAGGCAAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLQSSGRNGTGR*HGWGASRRQRG Trigger: GCCTCTTTGCCTTCTGCTGGCTCCCCAACCATGTCATCTACCTGTACCGTTCCTACCACTACTCTGAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS TCA 72 bp | GACCTGTTCATCAGGCCAGGCTGGCAGCAGAGAAGTTaGGTGTTGAACTGCTTCCTGAAGCTCTTGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DLFIRPGWQQRS*VLNCFLKLLLS Trigger: GCTGAGCAAGAGCTTCAGGAAGCAGTTCAACACTCAACTTCTCTGCTGCCAGCCTGGCCTGATGAACAGGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | CAGAAGGCAAAGAGGCCCACAAACACCAGTACTGTCTaGGCAAGCCGCTTCCGGGATTCGATCTGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QKAKRPTNTSTV*ASRFRDSICFL Trigger: CAAGAAGCAGATCGAATCCCGGAAGCGGCTTGCCAAGACAGTACTGGTGTTTGTGGGCCTCTTTGCCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 90 bp | GGGAGCCAGCAGAAGGCAAAGAGGCCCACAAACACCAGTACTGTCTaGGCAAGCCGCTTCCGGGATTCGATCTGCTTCTTGACATGTATA | + |
|
Preference number: 6 (lower is better) Translates to: GSQQKAKRPTNTSTV*ASRFRDSICFLTCI Trigger: TATACATGTCAAGAAGCAGATCGAATCCCGGAAGCGGCTTGCCAAGACAGTACTGGTGTTTGTGGGCCTCTTTGCCTTCTGCTGGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | TTGATGAGGCTAAAGGTAGCCGAGGGGTTAGTGCTCTaGAAGGAGGTCATGCAGGTGGTACTTCTGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMRLKVAEGLVL*KEVMQVVLLPV Trigger: CACAGGCAGAAGTACCACCTGCATGACCTCCTTCAAGAGCACTAACCCCTCGGCTACCTTTAGCCTCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 90 bp | ATATTTCTGTTGATGAGGCTAAAGGTAGCCGAGGGGTTAGTGCTCTaGAAGGAGGTCATGCAGGTGGTACTTCTGCCTGTGCTGTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: IFLLMRLKVAEGLVL*KEVMQVVLLPVLWD Trigger: GTCCCACAGCACAGGCAGAAGTACCACCTGCATGACCTCCTTCAAGAGCACTAACCCCTCGGCTACCTTTAGCCTCATCAACAGAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | TGGGATGCCTGGATATCCATTGGCCGTACAATGGCTTaGTACCTGTCAGCTGACAGTGCCGTAAGTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WDAWISIGRTMA*YLSADSAVSVK Trigger: CTTCACACTTACGGCACTGTCAGCTGACAGGTACAAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 72 bp | GCTTTGAGACAGATCTTCATCAGGGCATGGGATGCCTaGATATCCATTGGCCGTACAATGGCTTTGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALRQIFIRAWDA*ISIGRTMALYL Trigger: CAGGTACAAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 72 bp | ATGAAGGTTTGGTTGGTATCTTTCACATGGAAGGGGTaGAGGTCAGAAAACACAGCCTCTGGGATGGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: MKVWLVSFTWKG*RSENTASGMAN Trigger: GTTGGCCATCCCAGAGGCTGTGTTTTCTGACCTCCACCCCTTCCATGTGAAAGATACCAACCAAACCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | GGCACGTTTCGCATGGACTTGACCGTGCAGAAGATCTaGATGAGCGTGATGTTGCCAATAAGACCTATCACG | + |
|
Preference number: 6 (lower is better) Translates to: GTFRMDLTVQKI*MSVMLPIRPIT Trigger: CGTGATAGGTCTTATTGGCAACATCACGCTCATCAAGATCTTCTGCACGGTCAAGTCCATGCGAAACGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | AGATCTTCATCAGGGCATGGGATGCCTGGATATCCATaGGCCGTACAATGGCTTTGTACCTGTCAGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RSSSGHGMPGYP*AVQWLCTCQLT Trigger: TGTCAGCTGACAGGTACAAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 72 bp | ATCAAAGCAGCTTTGAGACAGATCTTCATCAGGGCATaGGATGCCTGGATATCCATTGGCCGTACAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IKAALRQIFIRA*DAWISIGRTMA Trigger: AGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGCTGCTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CCA 72 bp | GCACAACTAATGAAGGTTTGGTTGGTATCTTTCACATaGAAGGGGTGGAGGTCAGAAAACACAGCCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQLMKVWLVSFT*KGWRSENTASG Trigger: CCCAGAGGCTGTGTTTTCTGACCTCCACCCCTTCCATGTGAAAGATACCAACCAAACCTTCATTAGTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | CTAGAGATGAACAGGTTTGGCACGTTTCGCATGGACTaGACCGTGCAGAAGATCTTGATGAGCGTGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LEMNRFGTFRMD*TVQKILMSVML Trigger: CAACATCACGCTCATCAAGATCTTCTGCACGGTCAAGTCCATGCGAAACGTGCCAAACCTGTTCATCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 72 bp | ACCCCCACTGAAGTAAGTTGTATAAAGGGGATCAGTTaGCAGCCAATTCTGCCAAATAGCCACCTGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPTEVSCIKGIS*QPILPNSHLSA Trigger: GGCTGACAGGTGGCTATTTGGCAGAATTGGCTGCAAACTGATCCCCTTTATACAACTTACTTCAGTGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 90 bp | AAGACAGACACCCCCACTGAAGTAAGTTGTATAAAGGGGATCAGTTaGCAGCCAATTCTGCCAAATAGCCACCTGTCAGCCAGGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KTDTPTEVSCIKGIS*QPILPNSHLSARYL Trigger: CAAGTACCTGGCTGACAGGTGGCTATTTGGCAGAATTGGCTGCAAACTGATCCCCTTTATACAACTTACTTCAGTGGGGGTGTCTGTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 90 bp | AACAGGTTTGGCACGTTTCGCATGGACTTGACCGTGCAGAAGATCTaGATGAGCGTGATGTTGCCAATAAGACCTATCACGATGATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NRFGTFRMDLTVQKI*MSVMLPIRPITMIS Trigger: GCTTATCATCGTGATAGGTCTTATTGGCAACATCACGCTCATCAAGATCTTCTGCACGGTCAAGTCCATGCGAAACGTGCCAAACCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS CAA 90 bp | TCTGGGATGGCCAACAACATAGAGACAATCCAGATCAAAGCAGCTTaGAGACAGATCTTCATCAGGGCATGGGATGCCTGGATATCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SGMANNIETIQIKAA*RQIFIRAWDAWISI Trigger: AATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGCTGCTTTGATCTGGATTGTCTCTATGTTGTTGGCCATCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||
| CDS GCA 72 bp | GCCAATAAGACCTATCACGATGATAAGCCCATAAACTaGAGGGATGACATAGATGAAGCCCGGGTGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: ANKTYHDDKPIN*RDDIDEARVKP Trigger: TGGTTTCACCCGGGCTTCATCTATGTCATCCCTGCAGTTTATGGGCTTATCATCGTGATAGGTCTTATTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033730.3 |
||