Pregenerated sensors for GRM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003974Ensembl transcript IDs: ENSMUST00000004076.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTGAAGGAAGCATTCACGCGGCTGGCTGCAGCGATCAACTCTCGTaGGTCATCACTGCGCATGAACAGGACCACAACTCGCGCGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: GEGSIHAAGCSDQLS*VITAHEQDHNSRVR Trigger: CCTAACGCGCGAGTTGTGGTCCTGTTCATGCGCAGTGATGACTCACGAGAGTTGATCGCTGCAGCCAGCCGCGTGAATGCTTCCTTCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 90 bp | TGTCGTAGGACTTGCGGATGTTGGAGCGCCCCACCTTTTCAGCAGTaGCGATGCAGATGTTGCGTAGCCTTGCTTCCTGCTCGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CRRTCGCWSAPPFQQ*RCRCCVALLPARRP Trigger: AGGCCTTCGAGCAGGAAGCAAGGCTACGCAACATCTGCATCGCCACTGCTGAAAAGGTGGGGCGCTCCAACATCCGCAAGTCCTACGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 90 bp | ATAGGTCTGCAGTGGGCCACTGGCCAGGGCCACAATCCATGCAGGTaGACTCATCAACCAGGTATTCATAGGGCTCACATGGGATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: IGLQWATGQGHNPCR*THQPGIHRAHMGCR Trigger: TCTGCATCCCATGTGAGCCCTATGAATACCTGGTTGATGAGTTCACCTGCATGGATTGTGGCCCTGGCCAGTGGCCCACTGCAGACCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 90 bp | CCCATCAAAGATGCGAGCGATGCAGTTTGTCTTGGTCAGGAGAGCTaGATAACAGATGGCAAAGGAGGTCCCAAGCCCAAGTCGGCGCAA | + |
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Preference number: 5 (lower is better) Translates to: PIKDASDAVCLGQES*ITDGKGGPKPKSAQ Trigger: TTGCGCCGACTTGGGCTTGGGACCTCCTTTGCCATCTGTTATTCAGCTCTCCTGACCAAGACAAACTGCATCGCTCGCATCTTTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 90 bp | TCTTTCCATCCAGGATCTTCATTGCATCACAGAGCTTGGTGGTGTTaGGACAGAGGGTGCGTTGCATTTTGTGCAGCGCATGCGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: SFHPGSSLHHRAWWC*DRGCVAFCAAHAPW Trigger: CCATGGCGCATGCGCTGCACAAAATGCAACGCACCCTCTGTCCCAACACCACCAAGCTCTGTGATGCAATGAAGATCCTGGATGGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 90 bp | AGTCTGTGTGTGACCACATTCTTCTGGGGTTGGAACAGGACAATGTaGACCTTGGGGGCAAACAAACAGCCCAAGACCACGAAACCACTC | + |
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Preference number: 5 (lower is better) Translates to: SLCVTTFFWGWNRTM*TLGANKQPKTTKPL Trigger: GAGTGGTTTCGTGGTCTTGGGCTGTTTGTTTGCCCCCAAGGTGCACATTGTCCTGTTCCAACCCCAGAAGAATGTGGTCACACACAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 90 bp | GTCCAGGACTTCCCTTCCGTTGCACACTGTCGGGACATATGTGCTTaGAGAGGACTGAGAATATGTGGTCGCAGTTCCACTGACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: VQDFPSVAHCRDICA*RGLRICGRSSTDTE Trigger: TTCAGTGTCAGTGGAACTGCGACCACATATTCTCAGTCCTCTGCAAGCACATATGTCCCGACAGTGTGCAACGGAAGGGAAGTCCTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 90 bp | GGAGGTCCCAAGCCCAAGTCGGCGCAATGCACAGATGACAGGCGATaGCTTAGCAATGAAGAAGAATGTCATGCAATAGGACAGGCTAAC | + |
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Preference number: 5 (lower is better) Translates to: GGPKPKSAQCTDDRR*LSNEEECHAIGQAN Trigger: GTTAGCCTGTCCTATTGCATGACATTCTTCTTCATTGCTAAGCCATCGCCTGTCATCTGTGCATTGCGCCGACTTGGGCTTGGGACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 90 bp | CAGGGATCACTGCACTGGGAAGTGGGGACTGAGTTCCGGGACCAATaGATAGAGTCCACATCTAGATATAAAGTTTCTGCCCAGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QGSLHWEVGTEFRDQ*IESTSRYKVSAQWP Trigger: TGGCCACTGGGCAGAAACTTTATATCTAGATGTGGACTCTATTCATTGGTCCCGGAACTCAGTCCCCACTTCCCAGTGCAGTGATCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 90 bp | ACAACTTCTTTCCATCCAGGATCTTCATTGCATCACAGAGCTTGGTaGTGTTGGGACAGAGGGTGCGTTGCATTTTGTGCAGCGCATGCG | + |
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Preference number: 5 (lower is better) Translates to: TTSFHPGSSLHHRAW*CWDRGCVAFCAAHA Trigger: CGCATGCGCTGCACAAAATGCAACGCACCCTCTGTCCCAACACCACCAAGCTCTGTGATGCAATGAAGATCCTGGATGGAAAGAAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 90 bp | GCATGTACACATAAAACCCAGGCAGGCAATAGTGACTGGGCCTATTaGCCAGGCATCTTCCCACCTGATGTAATCCTCTGGAAGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: ACTHKTQAGNSDWAY*PGIFPPDVILWKVV Trigger: TACAACCTTCCAGAGGATTACATCAGGTGGGAAGATGCCTGGGCAATAGGCCCAGTCACTATTGCCTGCCTGGGTTTTATGTGTACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 90 bp | GATGACTGTTTCCCGCTTCTCTGGCAGGGTGTATCTTCTAGTACCTaGAGTCTCCAAGATAAGCCACACAGACACCATCACAATTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: DDCFPLLWQGVSSST*SLQDKPHRHHHNLH Trigger: GTGCAAATTGTGATGGTGTCTGTGTGGCTTATCTTGGAGACTCCAGGTACTAGAAGATACACCCTGCCAGAGAAGCGGGAAACAGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 90 bp | ATCCATGCAGGTGAACTCATCAACCAGGTATTCATAGGGCTCACATaGGATGCAGATCCAGCAGCAAACATCTCCTGGCTGCATGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: IHAGELINQVFIGLT*DADPAANISWLHVF Trigger: AAAAACATGCAGCCAGGAGATGTTTGCTGCTGGATCTGCATCCCATGTGAGCCCTATGAATACCTGGTTGATGAGTTCACCTGCATGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 90 bp | GGCCAACTTTTAAGTAGGAATACTTTCCACCTATATGCTGGAAGTTaGACACGTTGTATCTTCCCATCCCGTCTCCGTAAGTGTCAAACT | + |
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Preference number: 5 (lower is better) Translates to: GQLLSRNTFHLYAGS*TRCIFPSRLRKCQT Trigger: AGTTTGACACTTACGGAGACGGGATGGGAAGATACAACGTGTTCAACTTCCAGCATATAGGTGGAAAGTATTCCTACTTAAAAGTTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | TCTGCAGGAGCTCACGGATCACGCTGTCGTAGGACTTaGGGATGTTGGAGCGCCCCACCTTTTCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SAGAHGSRCRRT*GCWSAPPFQQW Trigger: CCACTGCTGAAAAGGTGGGGCGCTCCAACATCCGCAAGTCCTACGACAGCGTGATCCGTGAGCTCCTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | AGCGCCCCACCTTTTCAGCAGTGGCGATGCAGATGTTaGGTAGCCTTGCTTCCTGCTCGAAGGCCTCAATCC | + |
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Preference number: 6 (lower is better) Translates to: SAPPFQQWRCRC*VALLPARRPQS Trigger: GGATTGAGGCCTTCGAGCAGGAAGCAAGGCTACGCAACATCTGCATCGCCACTGCTGAAAAGGTGGGGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | GGATGTTGGAGCGCCCCACCTTTTCAGCAGTGGCGATaGAGATGTTGCGTAGCCTTGCTTCCTGCTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GCWSAPPFQQWR*RCCVALLPARR Trigger: CCTTCGAGCAGGAAGCAAGGCTACGCAACATCTGCATCGCCACTGCTGAAAAGGTGGGGCGCTCCAACATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | GAGCGCCCCACCTTTTCAGCAGTGGCGATGCAGATGTaGCGTAGCCTTGCTTCCTGCTCGAAGGCCTCAATC | + |
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Preference number: 6 (lower is better) Translates to: ERPTFSAVAMQM*RSLASCSKASI Trigger: GATTGAGGCCTTCGAGCAGGAAGCAAGGCTACGCAACATCTGCATCGCCACTGCTGAAAAGGTGGGGCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 72 bp | AGCATTCACGCGGCTGGCTGCAGCGATCAACTCTCGTaGGTCATCACTGCGCATGAACAGGACCACAACTCG | + |
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Preference number: 6 (lower is better) Translates to: SIHAAGCSDQLS*VITAHEQDHNS Trigger: CGAGTTGTGGTCCTGTTCATGCGCAGTGATGACTCACGAGAGTTGATCGCTGCAGCCAGCCGCGTGAATGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 72 bp | ACTTGCGGATGTTGGAGCGCCCCACCTTTTCAGCAGTaGCGATGCAGATGTTGCGTAGCCTTGCTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TCGCWSAPPFQQ*RCRCCVALLPA Trigger: AGCAGGAAGCAAGGCTACGCAACATCTGCATCGCCACTGCTGAAAAGGTGGGGCGCTCCAACATCCGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 72 bp | CAGTGGGCCACTGGCCAGGGCCACAATCCATGCAGGTaGACTCATCAACCAGGTATTCATAGGGCTCACATG | + |
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Preference number: 6 (lower is better) Translates to: QWATGQGHNPCR*THQPGIHRAHM Trigger: CATGTGAGCCCTATGAATACCTGGTTGATGAGTTCACCTGCATGGATTGTGGCCCTGGCCAGTGGCCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | GAGATGAGGTGGTGGAGTCCAGGACTTCCCTTCCGTTaGACACTGTCGGGACATATGTGCTTGCAGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: EMRWWSPGLPFR*TLSGHMCLQRT Trigger: AGTCCTCTGCAAGCACATATGTCCCGACAGTGTGCAACGGAAGGGAAGTCCTGGACTCCACCACCTCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | AGAGATGAGGTGGTGGAGTCCAGGACTTCCCTTCCGTaGCACACTGTCGGGACATATGTGCTTGCAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RDEVVESRTSLP*HTVGTYVLAED Trigger: GTCCTCTGCAAGCACATATGTCCCGACAGTGTGCAACGGAAGGGAAGTCCTGGACTCCACCACCTCATCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | GATGGCAAAGGAGGTCCCAAGCCCAAGTCGGCGCAATaGACAGATGACAGGCGATGGCTTAGCAATGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: DGKGGPKPKSAQ*TDDRRWLSNEE Trigger: TTCTTCATTGCTAAGCCATCGCCTGTCATCTGTGCATTGCGCCGACTTGGGCTTGGGACCTCCTTTGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | GTGACCACATTCTTCTGGGGTTGGAACAGGACAATGTaGACCTTGGGGGCAAACAAACAGCCCAAGACCACG | + |
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Preference number: 6 (lower is better) Translates to: VTTFFWGWNRTM*TLGANKQPKTT Trigger: CGTGGTCTTGGGCTGTTTGTTTGCCCCCAAGGTGCACATTGTCCTGTTCCAACCCCAGAAGAATGTGGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 72 bp | GTGGTCGCAGTTCCACTGACACTGAACCTGTTGAGGTaGAGTCTGTGTGTGACCACATTCTTCTGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: VVAVPLTLNLLR*SLCVTTFFWGW Trigger: CCAACCCCAGAAGAATGTGGTCACACACAGACTTCACCTCAACAGGTTCAGTGTCAGTGGAACTGCGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | CATAAAACCCAGGCAGGCAATAGTGACTGGGCCTATTaGCCAGGCATCTTCCCACCTGATGTAATCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HKTQAGNSDWAY*PGIFPPDVILW Trigger: CCAGAGGATTACATCAGGTGGGAAGATGCCTGGGCAATAGGCCCAGTCACTATTGCCTGCCTGGGTTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | GGACTTCCCTTCCGTTGCACACTGTCGGGACATATGTaGTTGCAGAGGACTGAGAATATGTGGTCGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLPFRCTLSGHM*LQRTENMWSQF Trigger: GAACTGCGACCACATATTCTCAGTCCTCTGCAAGCACATATGTCCCGACAGTGTGCAACGGAAGGGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 72 bp | CATTCTTCTGGGGTTGGAACAGGACAATGTGCACCTTaGGGGCAAACAAACAGCCCAAGACCACGAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: HSSGVGTGQCAP*GQTNSPRPRNH Trigger: GTGGTTTCGTGGTCTTGGGCTGTTTGTTTGCCCCCAAGGTGCACATTGTCCTGTTCCAACCCCAGAAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | TCCAGGATCTTCATTGCATCACAGAGCTTGGTGGTGTaGGGACAGAGGGTGCGTTGCATTTTGTGCAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SRIFIASQSLVV*GQRVRCILCSA Trigger: TGCGCTGCACAAAATGCAACGCACCCTCTGTCCCAACACCACCAAGCTCTGTGATGCAATGAAGATCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | CTTCCCTTCCGTTGCACACTGTCGGGACATATGTGCTaGCAGAGGACTGAGAATATGTGGTCGCAGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LPFRCTLSGHMC*QRTENMWSQFH Trigger: GTGGAACTGCGACCACATATTCTCAGTCCTCTGCAAGCACATATGTCCCGACAGTGTGCAACGGAAGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 90 bp | TTCTTTCCATCCAGGATCTTCATTGCATCACAGAGCTTGGTGGTGTaGGGACAGAGGGTGCGTTGCATTTTGTGCAGCGCATGCGCCATG | + |
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Preference number: 6 (lower is better) Translates to: FFPSRIFIASQSLVV*GQRVRCILCSACAM Trigger: CATGGCGCATGCGCTGCACAAAATGCAACGCACCCTCTGTCCCAACACCACCAAGCTCTGTGATGCAATGAAGATCCTGGATGGAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 90 bp | TGTGTGACCACATTCTTCTGGGGTTGGAACAGGACAATGTGCACCTaGGGGGCAAACAAACAGCCCAAGACCACGAAACCACTCAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: CVTTFFWGWNRTMCT*GANKQPKTTKPLKL Trigger: TAGCTTGAGTGGTTTCGTGGTCTTGGGCTGTTTGTTTGCCCCCAAGGTGCACATTGTCCTGTTCCAACCCCAGAAGAATGTGGTCACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 90 bp | GAACCTGTTGAGGTGAAGTCTGTGTGTGACCACATTCTTCTGGGGTaGGAACAGGACAATGTGCACCTTGGGGGCAAACAAACAGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: EPVEVKSVCDHILLG*EQDNVHLGGKQTAQ Trigger: TTGGGCTGTTTGTTTGCCCCCAAGGTGCACATTGTCCTGTTCCAACCCCAGAAGAATGTGGTCACACACAGACTTCACCTCAACAGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 72 bp | GGTGAACTCATCAACCAGGTATTCATAGGGCTCACATaGGATGCAGATCCAGCAGCAAACATCTCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GELINQVFIGLT*DADPAANISWL Trigger: CAGCCAGGAGATGTTTGCTGCTGGATCTGCATCCCATGTGAGCCCTATGAATACCTGGTTGATGAGTTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 72 bp | TTCCCGCTTCTCTGGCAGGGTGTATCTTCTAGTACCTaGAGTCTCCAAGATAAGCCACACAGACACCATCAC | + |
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Preference number: 6 (lower is better) Translates to: FPLLWQGVSSST*SLQDKPHRHHH Trigger: GTGATGGTGTCTGTGTGGCTTATCTTGGAGACTCCAGGTACTAGAAGATACACCCTGCCAGAGAAGCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | ACATTCTTCTGGGGTTGGAACAGGACAATGTGCACCTaGGGGGCAAACAAACAGCCCAAGACCACGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: TFFWGWNRTMCT*GANKQPKTTKP Trigger: TGGTTTCGTGGTCTTGGGCTGTTTGTTTGCCCCCAAGGTGCACATTGTCCTGTTCCAACCCCAGAAGAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | CATGGGATGCAGATCCAGCAGCAAACATCTCCTGGCTaGATGTTTTTCATTTCATTGGGGGCACAGGGATCA | + |
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Preference number: 6 (lower is better) Translates to: HGMQIQQQTSPG*MFFISLGAQGS Trigger: TGATCCCTGTGCCCCCAATGAAATGAAAAACATGCAGCCAGGAGATGTTTGCTGCTGGATCTGCATCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | ACTCATCAACCAGGTATTCATAGGGCTCACATGGGATaGAGATCCAGCAGCAAACATCTCCTGGCTGCATGT | + |
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Preference number: 6 (lower is better) Translates to: THQPGIHRAHMG*RSSSKHLLAAC Trigger: ACATGCAGCCAGGAGATGTTTGCTGCTGGATCTGCATCCCATGTGAGCCCTATGAATACCTGGTTGATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 72 bp | TTCCATCCAGGATCTTCATTGCATCACAGAGCTTGGTaGTGTTGGGACAGAGGGTGCGTTGCATTTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: FHPGSSLHHRAW*CWDRGCVAFCA Trigger: TGCACAAAATGCAACGCACCCTCTGTCCCAACACCACCAAGCTCTGTGATGCAATGAAGATCCTGGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 72 bp | CTGCACTGGGAAGTGGGGACTGAGTTCCGGGACCAATaGATAGAGTCCACATCTAGATATAAAGTTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LHWEVGTEFRDQ*IESTSRYKVSA Trigger: GGCAGAAACTTTATATCTAGATGTGGACTCTATTCATTGGTCCCGGAACTCAGTCCCCACTTCCCAGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 90 bp | AGTACCTGGAGTCTCCAAGATAAGCCACACAGACACCATCACAATTaGCACCAGTATCAAACCCAGGCAGATAAAAACCTGAGAACTGGG | + |
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Preference number: 6 (lower is better) Translates to: STWSLQDKPHRHHHN*HQYQTQADKNLRTG Trigger: CCCAGTTCTCAGGTTTTTATCTGCCTGGGTTTGATACTGGTGCAAATTGTGATGGTGTCTGTGTGGCTTATCTTGGAGACTCCAGGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | AGTCTCCAAGATAAGCCACACAGACACCATCACAATTaGCACCAGTATCAAACCCAGGCAGATAAAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: SLQDKPHRHHHN*HQYQTQADKNL Trigger: CAGGTTTTTATCTGCCTGGGTTTGATACTGGTGCAAATTGTGATGGTGTCTGTGTGGCTTATCTTGGAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 90 bp | CAGAGTTCTCGGCCTGATGCTTTGACCAAGGGTGTGTTGTTGTGCTaGATAAAAACAGTTATGACTATGCATGTACACATAAAACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QSSRPDALTKGVLLC*IKTVMTMHVHIKPR Trigger: CCTGGGTTTTATGTGTACATGCATAGTCATAACTGTTTTTATCAAGCACAACAACACACCCTTGGTCAAAGCATCAGGCCGAGAACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS TCA 72 bp | TTAAGTAGGAATACTTTCCACCTATATGCTGGAAGTTaGACACGTTGTATCTTCCCATCCCGTCTCCGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LSRNTFHLYAGS*TRCIFPSRLRK Trigger: CTTACGGAGACGGGATGGGAAGATACAACGTGTTCAACTTCCAGCATATAGGTGGAAAGTATTCCTACTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS GCA 72 bp | TCTCGGCCTGATGCTTTGACCAAGGGTGTGTTGTTGTaGTTGATAAAAACAGTTATGACTATGCATGTACAC | + |
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Preference number: 6 (lower is better) Translates to: SRPDALTKGVLL*LIKTVMTMHVH Trigger: GTGTACATGCATAGTCATAACTGTTTTTATCAAGCACAACAACACACCCTTGGTCAAAGCATCAGGCCGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | CAGAGTTCTCGGCCTGATGCTTTGACCAAGGGTGTGTaGTTGTGCTTGATAAAAACAGTTATGACTATGCAT | + |
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Preference number: 6 (lower is better) Translates to: QSSRPDALTKGV*LCLIKTVMTMH Trigger: ATGCATAGTCATAACTGTTTTTATCAAGCACAACAACACACCCTTGGTCAAAGCATCAGGCCGAGAACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CAA 72 bp | CGGCCTGATGCTTTGACCAAGGGTGTGTTGTTGTGCTaGATAAAAACAGTTATGACTATGCATGTACACATA | + |
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Preference number: 6 (lower is better) Translates to: RPDALTKGVLLC*IKTVMTMHVHI Trigger: TATGTGTACATGCATAGTCATAACTGTTTTTATCAAGCACAACAACACACCCTTGGTCAAAGCATCAGGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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| CDS CCA 72 bp | ACATGTATCCAAAATGTGAACCCCCAGCTTCACTCCTaGAAGCAAGTAATTGTCTTTGTTGATTTCATCAAT | + |
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Preference number: 6 (lower is better) Translates to: TCIQNVNPQLHS*KQVIVFVDFIN Trigger: ATTGATGAAATCAACAAAGACAATTACTTGCTTCCAGGAGTGAAGCTGGGGGTTCACATTTTGGATACATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004076.5 |
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