RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPX7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028597

Ensembl transcript IDs: ENSMUST00000030332.7, ENSMUST00000184609.2

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTTTCATCACCTGCTCTGTAATACGGGGCTTGATCTCCGCCACTaGCACAGTGGGGTCCCATGCTCCCACCACCTTTCCGTCTGGGTC +
Preference number: 1 (lower is better)
Translates to: EFHHLLCNTGLDLRH*HSGVPCSHHLSVWV
Trigger: GACCCAGACGGAAAGGTGGTGGGAGCATGGGACCCCACTGTGCCAGTGGCGGAGATCAAGCCCCGTATTACAGAGCAGGTGATGAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184609.2
3UTR-3UTR CCA 90 bp ATCCATCTACATGTTTTCTTCATAGCCTTGCCATGTTTCCTTTGGCTAGAGGCCGAGTTTGCGGAGGGATaGGAGTTCCAGAGGGACCCG +
Preference number: 2 (lower is better)
Translates to: IHLHVFFIALPCFLWLEAEFAEG*EFQRDP
Trigger: CGGGTCCCTCTGGAACTCCCATCCCTCCGCAAACTC...GGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 90 bp GTTAAGAACTCTCACTGGCCAGCAAGCAGTTGCTGTCCGTTGCTCTaGGATTCAAATCATCCAAGTCTTAGGATTTGTCCTCTGAGGAGT +
Preference number: 2 (lower is better)
Translates to: VKNSHWPASSCCPLL*DSNHPSLRICPLRS
Trigger: ACTCCTCAGAGGACAAATCCTAAGACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAGAGTTCTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 90 bp TGTGCTGTTAAGAACTCTCACTGGCCAGCAAGCAGTTGCTGTCCGTaGCTCTTGGATTCAAATCATCCAAGTCTTAGGATTTGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: CAVKNSHWPASSCCP*LLDSNHPSLRICPL
Trigger: CAGAGGACAAATCCTAAGACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAGAGTTCTTAACAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 90 bp TCATATCCATCTACATGTTTTCTTCATAGCCTTGCCATGTTTCCTTaGGCTAGAGGCCCGCTGGCTGGTGATGTGCTGTTAAGAACTCTC +
Preference number: 2 (lower is better)
Translates to: SYPSTCFLHSLAMFP*ARGPLAGDVLLRTL
Trigger: GAGAGTTCTTAACAGCACATCACCAGCCAGCGGGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGATGGATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR-3UTR TCA 90 bp TCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTTCGTTAGGATTTGTCCTCTaGGGAGTGAAGGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SQIMLVYTQKTVRSASPSLGFVL*GVKGRE
Trigger: TTCTCTTCCCTTCACTCCTCAGAGGACAAATCCTAA...CGAAGGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR-3UTR CCA 90 bp TTATTATCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCTTGCCATGTTTCCTTTaGCTAGAGGCCCGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LLSQIMLVYTQKTVRSASLPCFL*LEARWL
Trigger: CAGCCAGCGGGCCTCTAGCCAAAGGAAACATGGCAA...GGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGATAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CCA 72 bp CACCTGCTCTGTAATACGGGGCTTGATCTCCGCCACTaGCACAGTGGGGTCCCATGCTCCCACCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: HLLCNTGLDLRH*HSGVPCSHHLS
Trigger: GGAAAGGTGGTGGGAGCATGGGACCCCACTGTGCCAGTGGCGGAGATCAAGCCCCGTATTACAGAGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184609.2
3UTR CCA 72 bp CTCACTGGCCAGCAAGCAGTTGCTGTCCGTTGCTCTTaGATTCAAATCATCCAAGTCTTAGGATTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LTGQQAVAVRCS*IQIIQVLGFVL
Trigger: GAGGACAAATCCTAAGACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR GCA 72 bp TGTGCTGTTAAGAACTCTCACTGGCCAGCAAGCAGTTaGTGTCCGTTGCTCTTGGATTCAAATCATCCAAGT +
Preference number: 3 (lower is better)
Translates to: CAVKNSHWPASS*CPLLLDSNHPS
Trigger: ACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAGAGTTCTTAACAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR-3UTR CAA 90 bp TCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTTCGGTTTTCTTCATAGCCTaGCCATGTTTCCTTTGGCTA +
Preference number: 3 (lower is better)
Translates to: SQIMLVYTQKTVRSASPSVFFIA*PCFLWL
Trigger: TAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAAC...CGAAGGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR GCA 72 bp AGAACTCTCACTGGCCAGCAAGCAGTTGCTGTCCGTTaGTCTTGGATTCAAATCATCCAAGTCTTAGGATTT +
Preference number: 3 (lower is better)
Translates to: RTLTGQQAVAVR*SWIQIIQVLGF
Trigger: AAATCCTAAGACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAGAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR TCA 72 bp TGGATTCAAATCATCCAAGTCTTAGGATTTGTCCTCTaGGGAGTGAAGGGAAGAGAAGCTTTAGCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: WIQIIQVLGFVL*GVKGREALALC
Trigger: GCAGAGAGCTAAAGCTTCTCTTCCCTTCACTCCTCAGAGGACAAATCCTAAGACTTGGATGATTTGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR GCA 90 bp CATCTACATGTTTTCTTCATAGCCTTGCCATGTTTCCTTTGGCTAGAGGCCCGCGGGCCCAGGTCCCGCTaGAGCTGCTGCAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HLHVFFIALPCFLWLEARGPRSR*SCCKAR
Trigger: CCGAGCCTTGCAGCAGCTGCAGCGGGACCTGGGCCC...GCGGGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR GCA 90 bp TCACTGGCCAGCAAGCAGTTGCTGTCCGTTGCTCTTGGATTCAAATCATCCAAGCACAGTGGGGTCCCATaGTCCCACCACCTTTCCGTC +
Preference number: 4 (lower is better)
Translates to: SLASKQLLSVALGFKSSKHSGVP*SHHLSV
Trigger: GACGGAAAGGTGGTGGGAGCATGGGACCCCACTGTG...CTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CCA 90 bp GCCATGTTTCCTTTGGCTAGAGGCCCGCTGGCTGGTGATGTGCTGTTAAGAACTTACTTGAAGGCAGGGTaGGCACCAGTGCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: AMFPLARGPLAGDVLLRTYLKAG*APVPVT
Trigger: AGTCACTGGCACTGGTGCCCACCCTGCCTTCAAGTA...AGTTCTTAACAGCACATCACCAGCCAGCGGGCCTCTAGCCAAAGGAAACATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR TCA 90 bp TCACTGGCCAGCAAGCAGTTGCTGTCCGTTGCTCTTGGATTCAAATCATCCAAGGCAAGCACATTAAAATaGTGGGGGCCCAGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SLASKQLLSVALGFKSSKASTLK*WGPRSR
Trigger: GCGGGACCTGGGCCCCCATCATTTTAATGTGCTTGC...CTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CCA 90 bp AGGATTTGTCCTCTGAGGAGTGAAGGGAAGAGAAGCTTTAGCTCTCTGCCGGTGTCTCAATCTCCCTGTTaGTGTCTGGTTCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RICPLRSEGKRSFSSLPVSQSPC*CLVPVG
Trigger: GCCAACAGGAACCAGACACCAACAGGGAGATTGAGA...CACCGGCAGAGAGCTAAAGCTTCTCTTCCCTTCACTCCTCAGAGGACAAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CCA 90 bp TCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTTCGCTCCCTGTTGGTGTCTaGTTCCTGTTGGCCAAACTG +
Preference number: 4 (lower is better)
Translates to: SQIMLVYTQKTVRSASPSLPVGV*FLLAKL
Trigger: CAGTTTGGCCAACAGGAACCAGACACCAACAGGGAG...CGAAGGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR GCA 90 bp CATCTACATGTTTTCTTCATAGCCTTGCCATGTTTCCTTTGGCTAGAGGCCCGCACCAGTGCCAGTGACTaGGATCTTGCTAAACATGGG +
Preference number: 4 (lower is better)
Translates to: HLHVFFIALPCFLWLEARTSASD*DLAKHG
Trigger: CCCATGTTTAGCAAGATCGCAGTCACTGGCACTGGT...GCGGGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 72 bp TCTACATGTTTTCTTCATAGCCTTGCCATGTTTCCTTaGGCTAGAGGCCCGCTGGCTGGTGATGTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: STCFLHSLAMFP*ARGPLAGDVLL
Trigger: TAACAGCACATCACCAGCCAGCGGGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 72 bp TTGCCTCATATCCATCTACATGTTTTCTTCATAGCCTaGCCATGTTTCCTTTGGCTAGAGGCCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPHIHLHVFFIA*PCFLWLEARWL
Trigger: CAGCCAGCGGGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGATGGATATGAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CCA 90 bp ATTATCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTCCAGAAGTTCCAGGTaGGCTCCTTCCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: IITNNACLHAENRAECFPSRSSR*APSQKS
Trigger: AGACTTCTGGGAAGGAGCCCACCTGGAACTTCTGGA...GGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR GCA 90 bp ATTATCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCAAGAGACACTGTAGGTaGGGCGGGCAAAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: IITNNACLHAENRAECFPKRHCR*GGQSSQ
Trigger: TTGAGAACTTTGCCCGCCGCACCTACAGTGTCTCTT...GGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR GCA 90 bp TCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTTCGATGAGTTTCATCACCTaGTCTGTAATACGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SQIMLVYTQKTVRSASPSMSFIT*SVIRGL
Trigger: CAAGCCCCGTATTACAGAGCAGGTGATGAAACTCAT...CGAAGGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 72 bp TCTCACTGGCCAGCAAGCAGTTGCTGTCCGTTGCTCTaGGATTCAAATCATCCAAGTCTTAGGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SHWPASSCCPLL*DSNHPSLRICP
Trigger: AGGACAAATCCTAAGACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
3UTR CAA 72 bp AAGAACTCTCACTGGCCAGCAAGCAGTTGCTGTCCGTaGCTCTTGGATTCAAATCATCCAAGTCTTAGGATT +
Preference number: 4 (lower is better)
Translates to: KNSHWPASSCCP*LLDSNHPSLRI
Trigger: AATCCTAAGACTTGGATGATTTGAATCCAAGAGCAACGGACAGCAACTGCTTGCTGGCCAGTGAGAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CAA 90 bp TTGGCTAGAGGCCCGCTGGCTGGTGATGTGCTGTTAAGAACTCTCACTGGCCAGTCCAGCGACACCAGCTaGCCCCGGATGTTGACCGCC +
Preference number: 5 (lower is better)
Translates to: LARGPLAGDVLLRTLTGQSSDTS*PRMLTA
Trigger: GGCGGTCAACATCCGGGGCAAGCTGGTGTCGCTGGA...CTGGCCAGTGAGAGTTCTTAACAGCACATCACCAGCCAGCGGGCCTCTAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CAA 90 bp CCATCTACATGTTTTCTTCATAGCCTTGCCATGTTTCCTTTGGCTAGAGGCCCGGAAGTCCTGCTCGGATaGCGCGCAGGCCGCGGCCCA +
Preference number: 5 (lower is better)
Translates to: PSTCFLHSLAMFPLARGPEVLLG*RAGRGP
Trigger: TGGGCCGCGGCCTGCGCGCAATCCGAGCAGGACTTC...CGGGCCTCTAGCCAAAGGAAACATGGCAAGGCTATGAAGAAAACATGTAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS CCA 90 bp GTGGGCTCCTTCCCAGAAGTCTGGGTTAGGTACTTGAAGGCAGGGTaGGCACCAGTGCCAGTGACTGCGATCTTGCTAAACATGGGAAAA +
Preference number: 5 (lower is better)
Translates to: VGSFPEVWVRYLKAG*APVPVTAILLNMGK
Trigger: TTTTCCCATGTTTAGCAAGATCGCAGTCACTGGCACTGGTGCCCACCCTGCCTTCAAGTACCTAACCCAGACTTCTGGGAAGGAGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CAA 90 bp TCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTTCGCCAGTGACTGCGATCTaGCTAAACATGGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: SQIMLVYTQKTVRSASPSPVTAI*LNMGKE
Trigger: CTCTTTTCCCATGTTTAGCAAGATCGCAGTCACTGG...CGAAGGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CAA 90 bp TTATTATCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCGTCTGGGTTAGGTACTaGAAGGCAGGGTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: LLSQIMLVYTQKTVRSASVWVRY*KAGWAP
Trigger: TGGTGCCCACCCTGCCTTCAAGTACCTAACCCAGAC...GGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGATAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CAA 90 bp TTATTATCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCGGTGTCTGGTTCCTGTaGGCCAAACTGGTTGCAAGG +
Preference number: 5 (lower is better)
Translates to: LLSQIMLVYTQKTVRSASGVWFL*AKLVAR
Trigger: CCTTGCAACCAGTTTGGCCAACAGGAACCAGACACC...GGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGATAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS-3UTR CAA 90 bp ATTATCACAAATAATGCTTGTTTACACGCAGAAAACCGTGCGGAGTGCTTCCCCTTCTCAATCTCCCTGTaGGTGTCTGGTTCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: IITNNACLHAENRAECFPFSISL*VSGSCW
Trigger: CCAACAGGAACCAGACACCAACAGGGAGATTGAGAA...GGGGAAGCACTCCGCACGGTTTTCTGCGTGTAAACAAGCATTATTTGTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS CAA 90 bp GCCCCGGATGTTGACCGCCTTGAAGTCGTAGAAGTCCTGCTCGGATaGCGCGCAGGCCGCGGCCCACAGGAGCAGCCACGCCGTCGCCAC +
Preference number: 6 (lower is better)
Translates to: APDVDRLEVVEVLLG*RAGRGPQEQPRRRH
Trigger: GTGGCGACGGCGTGGCTGCTCCTGTGGGCCGCGGCCTGCGCGCAATCCGAGCAGGACTTCTACGACTTCAAGGCGGTCAACATCCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030332.7
ENSMUST00000184609.2
CDS CAA 72 bp GTTGACCGCCTTGAAGTCGTAGAAGTCCTGCTCGGATaGCGCGCAGGCCGCGGCCCACAGGAGCAGCCACGC +
Preference number: 6 (lower is better)
Translates to: VDRLEVVEVLLG*RAGRGPQEQPR
Trigger: GCGTGGCTGCTCCTGTGGGCCGCGGCCTGCGCGCAATCCGAGCAGGACTTCTACGACTTCAAGGCGGTCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030332.7
ENSMUST00000184609.2
CDS CCA 72 bp TTCCCAGAAGTCTGGGTTAGGTACTTGAAGGCAGGGTaGGCACCAGTGCCAGTGACTGCGATCTTGCTAAAC +
Preference number: 6 (lower is better)
Translates to: FPEVWVRYLKAG*APVPVTAILLN
Trigger: GTTTAGCAAGATCGCAGTCACTGGCACTGGTGCCCACCCTGCCTTCAAGTACCTAACCCAGACTTCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS GCA 72 bp GTACTTGAAGGCAGGGTGGGCACCAGTGCCAGTGACTaGGATCTTGCTAAACATGGGAAAAGAGACACTGTA +
Preference number: 6 (lower is better)
Translates to: VLEGRVGTSASD*DLAKHGKRDTV
Trigger: TACAGTGTCTCTTTTCCCATGTTTAGCAAGATCGCAGTCACTGGCACTGGTGCCCACCCTGCCTTCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7
CDS GCA 72 bp AAGTCTTCTCGTTTCCGAAGGATGAGTTTCATCACCTaGTCTGTAATACGGGGCTTGATCTCCGCCACTGGC +
Preference number: 6 (lower is better)
Translates to: KSSRFRRMSFIT*SVIRGLISATG
Trigger: GCCAGTGGCGGAGATCAAGCCCCGTATTACAGAGCAGGTGATGAAACTCATCCTTCGGAAACGAGAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030332.7