Pregenerated sensors for GPR37L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026424Ensembl transcript IDs: ENSMUST00000027682.9
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCAAGTCCATCTCTAAACAGCAAGATGAGAGAGGGGTCAAAGTaGGACCGTGTCAAAGAATCAGCAGACCATCATGGACCGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: EPSPSLNSKMREGSK*DRVKESADHHGPGW Trigger: CCATCCCGGTCCATGATGGTCTGCTGATTCTTTGACACGGTCTCACTTTGACCCCTCTCTCATCTTGCTGTTTAGAGATGGACTTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR TCA 90 bp | AAGAACAGCATTGTTTGTAGATGGAGCTTTGAAAAGCCCAGACTTTaGCAAGATGAGCCAAGTCCATCTCTAAACAGCAAGATGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: KNSIVCRWSFEKPRL*QDEPSPSLNSKMRE Trigger: CTCTCTCATCTTGCTGTTTAGAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTACAAACAATGCTGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR-3UTR GCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCCTCCCCCGCCGGCTCTaGACCTGCTCCCGATCCCCC | + |
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Preference number: 2 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPLPRRL*TCSRSP Trigger: GGGGGATCGGGAGCAGGTGCAGAGCCGGCGGGGGAG...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR-3UTR TCA 90 bp | CAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCCTCGGAGGATAAGAAGAGAGGGGTCAAAGTaGGACCGTGTCAAAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: QISIYKEVEIWQAPRRIRREGSK*DRVKES Trigger: TGATTCTTTGACACGGTCTCACTTTGACCCCTCTCT...TCTTATCCTCCGAGGGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR CAA 90 bp | AAGGAGGTGGAGATCTGGCAGGCCCCTCGGAGGATAAGAACAGCATaGTTTGTAGATGGAGCTTTGAAAAGCCCAGACTTTGACAAGATG | + |
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Preference number: 2 (lower is better) Translates to: KEVEIWQAPRRIRTA*FVDGALKSPDFDKM Trigger: CATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTACAAACAATGCTGTTCTTATCCTCCGAGGGGCCTGCCAGATCTCCACCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAAAACACATGCAGGGCTAAGACAGACCCACTTTAGAAAGTGGAGACCAGGGAGCATTGTTTGTAGATaGAGCTTTGAAAAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GKTHAGLRQTHFRKWRPGSIVCR*SFEKPR Trigger: TCTGGGCTTTTCAAAGCTCCATCTACAAACAATGCT...CCCTGGTCTCCACTTTCTAAAGTGGGTCTGTCTTAGCCCTGCATGTGTTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCACACACAGACTTTGACAAGATaGGCCAAGTCCATCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: QYRRLGRSRNDVGAHQHTQTLTR*AKSISK Trigger: TTTAGAGATGGACTTGGCTCATCTTGTCAAAGTCTG...TGTGTGCTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR CCA 72 bp | AAAGTGAGACCGTGTCAAAGAATCAGCAGACCATCATaGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: KVRPCQRISRPS*TGMAPLPRRLC Trigger: GCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGATTCTTTGACACGGTCTCACTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR CCA 72 bp | CCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTaGCAGGCCCCTCGGAGGATAAGAACAGCATTGTTT | + |
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Preference number: 3 (lower is better) Translates to: PRQISIYKEVEI*QAPRRIRTALF Trigger: AAACAATGCTGTTCTTATCCTCCGAGGGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR CCA 72 bp | ACCTCTGAGAACGGAAGACAGAGTGAGAGAATGCTCTaGGGAAAAGGGAAAACACATGCAGGGCTAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: TSENGRQSERML*GKGKTHAGLRQ Trigger: CTGTCTTAGCCCTGCATGTGTTTTCCCTTTTCCCCAGAGCATTCTCTCACTCTGTCTTCCGTTCTCAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR TCA 72 bp | CCATCTCTAAACAGCAAGATGAGAGAGGGGTCAAAGTaGGACCGTGTCAAAGAATCAGCAGACCATCATGGA | + |
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Preference number: 3 (lower is better) Translates to: PSLNSKMREGSK*DRVKESADHHG Trigger: TCCATGATGGTCTGCTGATTCTTTGACACGGTCTCACTTTGACCCCTCTCTCATCTTGCTGTTTAGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR-3UTR CAA 90 bp | CAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCACACATTTGTAGATGGAGCTTaGAAAAGCCCAGACTTTGAC | + |
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Preference number: 3 (lower is better) Translates to: QYRRLGRSRNDVGAHQHTFVDGA*KSPDFD Trigger: GTCAAAGTCTGGGCTTTTCAAAGCTCCATCTACAAA...TGTGTGCTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR TCA 72 bp | ATTGTTTGTAGATGGAGCTTTGAAAAGCCCAGACTTTaGCAAGATGAGCCAAGTCCATCTCTAAACAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: IVCRWSFEKPRL*QDEPSPSLNSK Trigger: CTTGCTGTTTAGAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTACAAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | ATCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCAGGCTTCCTGCCTGGTaGGCCCCGCACCCGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: ISRPSWTGMAPLPRRLCTRLPAW*APHPPR Trigger: ACGTGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCT...GGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | TCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCTGGCTCCTGGGCCAGCTaGCATAGCAGGAGTTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SADHHGPGWHPSPAGSAPGSWAS*HSRSSG Trigger: GCCCGAACTCCTGCTATGGCAGCTGGCCCAGGAGCC...AGGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | ATCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCAGGAGGTCCAGGGTCTaGCGCGTGAGCTCGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: ISRPSWTGMAPLPRRLCTRRSRV*RVSSVE Trigger: CTCTACCGAGCTCACGCGGCAGACCCTGGACCTCCT...GGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR TCA 90 bp | ATCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCCGACCACGGTGCTGTTaGGCTGGCTCTCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: ISRPSWTGMAPLPRRLCTRPRCC*AGSHTA Trigger: AGCAGTGTGAGAGCCAGCTCAACAGCACCGTGGTCG...GGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | ATCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCCCTCCAAAGTCTTGGTaGGCTGCAGGCCAGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: ISRPSWTGMAPLPRRLCTPPKSW*AAGQQD Trigger: ATCCTGCTGGCCTGCAGCCCACCAAGACTTTGGAGG...GGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | TCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCTTGCAGGCCAGCAGGATaGATGGGCTTGGGATATTCA | + |
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Preference number: 4 (lower is better) Translates to: SADHHGPGWHPSPAGSAPCRPAG*MGLGYS Trigger: TGAATATCCCAAGCCCATCCATCCTGCTGGCCTGCA...AGGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | TCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCTTGGACCTTGGCTCTATaGCCACCTAAAGATGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SADHHGPGWHPSPAGSAPWTLAL*PPKDEV Trigger: CACCTCATCTTTAGGTGGGCATAGAGCCAAGGTCCA...AGGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | ATCAGCAGACCATCATGGACCGGGATGGCACCCCTCCCCCGCCGGCTCTGCACCAAGCCACCACGATATTaGAGACGTTCTCAGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: ISRPSWTGMAPLPRRLCTKPPRY*RRSQGV Trigger: CACTCCCTGAGAACGTCTGCAATATCGTGGTGGCTT...GGTGCAGAGCCGGCGGGGGAGGGGTGCCATCCCGGTCCATGATGGTCTGCTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCGCCCAGGGGCAGGAGTaGGGGCGACTCCCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPAQGQE*GRLPGL Trigger: AAGCCCAGGGAGTCGCCCCCACTCCTGCCCCTGGGC...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | AAAAGGCCAAGCCCTGGCTCTAGGGTGGCCAGATTGAGATTCTGGGCAACTCTATACACTCAGGCTTCCTaGCTGGTGGGCCCCGCACCC | + |
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Preference number: 4 (lower is better) Translates to: KRPSPGSRVARLRFWATLYTQAS*LVGPAP Trigger: GGGTGCGGGGCCCACCAGGCAGGAAGCCTGAGTGTA...TAGAGTTGCCCAGAATCTCAATCTGGCCACCCTAGAGCCAGGGCTTGGCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | CAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCCTCGGAGGATAAGACTCCATGAAGGGCACTaGCCGGCAAGAAACATCCCC | + |
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Preference number: 4 (lower is better) Translates to: QISIYKEVEIWQAPRRIRLHEGH*PARNIP Trigger: GGGGATGTTTCTTGCCGGGCAGTGCCCTTCATGGAG...TCTTATCCTCCGAGGGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGCCAAGCCCTGGCTCTAGGGTGGCCAGATTGAGATTCTGGGCAACTCTATGGCCTCCAAAGTCTTaGTGGGCTGCAGGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KRPSPGSRVARLRFWATLWPPKS*WAAGQQ Trigger: CTGCTGGCCTGCAGCCCACCAAGACTTTGGAGGCCA...TAGAGTTGCCCAGAATCTCAATCTGGCCACCCTAGAGCCAGGGCTTGGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | AGTAGAAATGATGTTGGAGCTCACCAGCACACAATCCATCATGATGGACAGGCTCTCAGGCTTCCTGCCTaGTGGGCCCCGCACCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRNDVGAHQHTIHHDGQALRLPA*WAPHPP Trigger: TGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCTGAG...AGCCTGTCCATCATGATGGATTGTGTGCTGGTGAGCTCCAACATCATTTCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCCGGGGTCGACTCTGCTaGTCCTGGACCTTGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPRGRLC*SWTLAL Trigger: TAGAGCCAAGGTCCAGGAGCAGCAGAGTCGACCCCG...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | GTAGATGGAGCTTTGAAAAGCCCAGACTTTGACAAGATGAGCCAAGTCCATCTCGTGGGAGCCGGCTCCTaGGCCAGCTGCCATAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VDGALKSPDFDKMSQVHLVGAGS*ASCHSR Trigger: CCTGCTATGGCAGCTGGCCCAGGAGCCGGCTCCCAC...GAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | CTAGTCCAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCCTGGCCCAGTGGCCTaGAGATGCACAGGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LVQYRRLGRSRNDVGAHQPGPVA*RCTGGA Trigger: TGCTCCTCCTGTGCATCTGCAGGCCACTGGGCCAGG...CTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTGGACTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCCGACTCTGCTGCTCCTaGACCTTGGCTCTATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPRLCCS*TLALCP Trigger: TGGGCATAGAGCCAAGGTCCAGGAGCAGCAGAGTCG...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | CAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCACACAGGCCCCATCCTTGTCTaGGTTGGGGCTAGTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QYRRLGRSRNDVGAHQHTGPILV*VGASGL Trigger: GAGGCCACTAGCCCCAACCCAGACAAGGATGGGGCC...TGTGTGCTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | GGGAAAACACATGCAGGGCTAAGACAGACCCACTTTAGAAAGTGGAGACCAGGGGTCCATTACCTGGGGTaGCCCCATCCTTGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GKTHAGLRQTHFRKWRPGVHYLG*PHPCLG Trigger: ACCCAGACAAGGATGGGGCCACCCCAGGTAATGGAC...CCCTGGTCTCCACTTTCTAAAGTGGGTCTGTCTTAGCCCTGCATGTGTTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | GGGAAAACACATGCAGGGCTAAGACAGACCCACTTTAGAAAGTGGAGACCAGGGGTGCTGGTGGCCACATaGAATCGGTCTATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GKTHAGLRQTHFRKWRPGVLVAT*NRSMPR Trigger: CCTGGGCATAGACCGATTCCATGTGGCCACCAGCAC...CCCTGGTCTCCACTTTCTAAAGTGGGTCTGTCTTAGCCCTGCATGTGTTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCCCTTTGGCAGGGTGCTaGTGGCCACATGGAATCGGT | + |
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Preference number: 4 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPPLAGC*WPHGIG Trigger: ACCGATTCCATGTGGCCACCAGCACCCTGCCAAAGG...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | GGGAAAACACATGCAGGGCTAAGACAGACCCACTTTAGAAAGTGGAGACCAGGGAAAGTCTTGGTGGGCTaGAGGCCAGCAGGATGGATG | + |
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Preference number: 4 (lower is better) Translates to: GKTHAGLRQTHFRKWRPGKVLVG*RPAGWM Trigger: CATCCATCCTGCTGGCCTGCAGCCCACCAAGACTTT...CCCTGGTCTCCACTTTCTAAAGTGGGTCTGTCTTAGCCCTGCATGTGTTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCGCTGCTCCTGGACCTTaGCTCTATGCCCACCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPAAPGP*LYAHLK Trigger: CTTTAGGTGGGCATAGAGCCAAGGTCCAGGAGCAGC...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | CTAGTCCAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGAGTGCTGTACCTCCTTaGGCCCCTCGTCCTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LVQYRRLGRSRNDVGAHQSAVPP*APRPWC Trigger: GCACCAAGGACGAGGGGCCCAAGGAGGTACAGCACT...CTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTGGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR TCA 90 bp | AAAAGGCCAAGCCCTGGCTCTAGGGTGGCCAGATTGAGATTCTGGGCAACTCTAGCCACACAATGCACATaGCAGACAGATTGCCAACGA | + |
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Preference number: 4 (lower is better) Translates to: KRPSPGSRVARLRFWATLATQCT*QTDCQR Trigger: TCGTTGGCAATCTGTCTGTCATGTGCATTGTGTGGC...TAGAGTTGCCCAGAATCTCAATCTGGCCACCCTAGAGCCAGGGCTTGGCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | CAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCACACAAGCTGGCTCTCACACTaGTCATGCCTGCCCGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: QYRRLGRSRNDVGAHQHTSWLSH*SCLPAL Trigger: TAGAGCGGGCAGGCATGAGCAGTGTGAGAGCCAGCT...TGTGTGCTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | CAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCACACAGGCCAGCAGGATGGATaGGCTTGGGATATTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QYRRLGRSRNDVGAHQHTGQQDG*AWDIQP Trigger: GGGCTGAATATCCCAAGCCCATCCATCCTGCTGGCC...TGTGTGCTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | GTAGATGGAGCTTTGAAAAGCCCAGACTTTGACAAGATGAGCCAAGTCCATCTCCTGCAGCCTCTGACTTaGCGTCCCGGTCAGGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: VDGALKSPDFDKMSQVHLLQPLT*RPGQVD Trigger: GTCAACCTGACCGGGACGCCAAGTCAGAGGCTGCAG...GAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | GTAGATGGAGCTTTGAAAAGCCCAGACTTTGACAAGATGAGCCAAGTCCATCTCAATGGGCCTCACCTTTaGCAGGGTGCTGGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VDGALKSPDFDKMSQVHLNGPHL*QGAGGH Trigger: GTGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATT...GAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCAAGAAGGTGGAGAACTaGTTGATGAGGCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPKKVEN*LMRPRR Trigger: CCTCCTGGGCCTCATCAACCAGTTCTCCACCTTCTT...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | ACGGGAACAATGCAACTGAGAACCTCTGAGAACGGAAGACAGAGTGAGAGAATGCAATCCAGAAAGGCCTaGCCCAGTGGCCTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: TGTMQLRTSENGRQSERMQSRKA*PSGLQM Trigger: CATCTGCAGGCCACTGGGCCAGGCCTTTCTGGATTG...CATTCTCTCACTCTGTCTTCCGTTCTCAGAGGTTCTCAGTTGCATTGTTCCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | CTAGTCCAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGTCACCTTTGGCAGGGTaGTGGTGGCCACATGGAATC | + |
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Preference number: 4 (lower is better) Translates to: LVQYRRLGRSRNDVGAHQSPLAG*WWPHGI Trigger: GATTCCATGTGGCCACCAGCACCCTGCCAAAGGTGA...CTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTGGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | CTAGTCCAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGTTGGCAGGGTGCTGGTaGCCACATGGAATCGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LVQYRRLGRSRNDVGAHQLAGCW*PHGIGL Trigger: TAGACCGATTCCATGTGGCCACCAGCACCCTGCCAA...CTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTGGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | CTAGTCCAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGACGGTGCTGTTGAGCTaGCTCTCACACTGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: LVQYRRLGRSRNDVGAHQTVLLS*LSHCSC Trigger: GCATGAGCAGTGTGAGAGCCAGCTCAACAGCACCGT...CTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTGGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CCA 90 bp | AGTAGAAATGATGTTGGAGCTCACCAGCACACAATCCATCATGATGGACAGGCTATTGACATCGCTCAATaGGCCTCACCTTTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SRNDVGAHQHTIHHDGQAIDIAQ*ASPLAG Trigger: CCCTGCCAAAGGTGAGGCCCATTGAGCGATGTCAAT...AGCCTGTCCATCATGATGGATTGTGTGCTGGTGAGCTCCAACATCATTTCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR CAA 72 bp | GAGATCTGGCAGGCCCCTCGGAGGATAAGAACAGCATaGTTTGTAGATGGAGCTTTGAAAAGCCCAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: EIWQAPRRIRTA*FVDGALKSPDF Trigger: AAAGTCTGGGCTTTTCAAAGCTCCATCTACAAACAATGCTGTTCTTATCCTCCGAGGGGCCTGCCAGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR TCA 90 bp | GTAGATGGAGCTTTGAAAAGCCCAGACTTTGACAAGATGAGCCAAGTCCATCTCTTCGGGCAGGTCAGCTaGAGGTTTCATGATACACGA | + |
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Preference number: 4 (lower is better) Translates to: VDGALKSPDFDKMSQVHLFGQVS*RFHDTR Trigger: TCGTGTATCATGAAACCTTCAGCTGACCTGCCCGAA...GAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR GCA 90 bp | CTAGTCCAGTATAGGAGGCTAGGTAGGAGTAGAAATGATGTTGGAGCTCACCAGCAAAATACCACCACATaGGGGCATTCTGGTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LVQYRRLGRSRNDVGAHQQNTTT*GHSGRS Trigger: TGACCTACCAGAATGCCCGCATGTGGTGGTATTTTG...CTGGTGAGCTCCAACATCATTTCTACTCCTACCTAGCCTCCTATACTGGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| 3UTR CAA 72 bp | CGGAGGATAAGAACAGCATTGTTTGTAGATGGAGCTTaGAAAAGCCCAGACTTTGACAAGATGAGCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RRIRTALFVDGA*KSPDFDKMSQV Trigger: GACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTACAAACAATGCTGTTCTTATCCTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 90 bp | CTCACACTGCTCATGCCTGCCCGCTCTACACTCAGGCTTCCTGCCTaGTGGGCCCCGCACCCGCCACGTCACCAGCTGACAGGTGACGGT | + |
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Preference number: 5 (lower is better) Translates to: LTLLMPARSTLRLPA*WAPHPPRHQLTGDG Trigger: ACCGTCACCTGTCAGCTGGTGACGTGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCATGAGCAGTGTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 90 bp | ACACTGCTCATGCCTGCCCGCTCTACACTCAGGCTTCCTGCCTGGTaGGCCCCGCACCCGCCACGTCACCAGCTGACAGGTGACGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: TLLMPARSTLRLPAW*APHPPRHQLTGDGE Trigger: TTCACCGTCACCTGTCAGCTGGTGACGTGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCATGAGCAGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 90 bp | ACCACAGTCAGGCCGACCACGGTGCTGTTGAGCTGGCTCTCACACTaGTCATGCCTGCCCGCTCTACACTCAGGCTTCCTGCCTGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: TTVRPTTVLLSWLSH*SCLPALHSGFLPGG Trigger: CCCACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCATGAGCAGTGTGAGAGCCAGCTCAACAGCACCGTGGTCGGCCTGACTGTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 90 bp | ACTCCTCGGGTACATAGTGCTGTACCTCCTTGGGCCCCTCGTCCTTaGTGCCTCTTCGGGGTCGACTCTGCTGCTCCTGGACCTTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TPRVHSAVPPWAPRP*CLFGVDSAAPGPWL Trigger: GAGCCAAGGTCCAGGAGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGACGAGGGGCCCAAGGAGGTACAGCACTATGTACCCGAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 90 bp | TCCTTGGGCCCCTCGTCCTTGGTGCCTCTTCGGGGTCGACTCTGCTaGTCCTGGACCTTGGCTCTATGCCCACCTAAAGATGAGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLGPSSLVPLRGRLC*SWTLALCPPKDEVA Trigger: TGCCACCTCATCTTTAGGTGGGCATAGAGCCAAGGTCCAGGAGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGACGAGGGGCCCAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 90 bp | TGGGATATTCAGCCCACTCCTCGGGTACATAGTGCTGTACCTCCTTaGGCCCCTCGTCCTTGGTGCCTCTTCGGGGTCGACTCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: WDIQPTPRVHSAVPP*APRPWCLFGVDSAA Trigger: AGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGACGAGGGGCCCAAGGAGGTACAGCACTATGTACCCGAGGAGTGGGCTGAATATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 90 bp | GATTGCCAACGATACCCACAGCAAACACCACCAGAGCCAGGAGCATaGTGGCGTAGGCGCTGTAGGAGCTCTCGGTCACCGGATACAGGG | + |
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Preference number: 5 (lower is better) Translates to: DCQRYPQQTPPEPGA*WRRRCRSSRSPDTG Trigger: CCCTGTATCCGGTGACCGAGAGCTCCTACAGCGCCTACGCCATCATGCTCCTGGCTCTGGTGGTGTTTGCTGTGGGTATCGTTGGCAATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 90 bp | CTCGGTCACCGGATACAGGGGGTTCTGAATCTGCAGCCTCTGACTTaGCGTCCCGGTCAGGTTGACCCTCAGCTCTTGTCCATTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGHRIQGVLNLQPLT*RPGQVDPQLLSITW Trigger: CCAGGTAATGGACAAGAGCTGAGGGTCAACCTGACCGGGACGCCAAGTCAGAGGCTGCAGATTCAGAACCCCCTGTATCCGGTGACCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 90 bp | CATCGCTCAATGGGCCTCACCTTTGGCAGGGTGCTGGTGGCCACATaGAATCGGTCTATGCCCAGGGCACAGAGACTGAAGGTTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HRSMGLTFGRVLVAT*NRSMPRAQRLKVVT Trigger: AGTCACAACCTTCAGTCTCTGTGCCCTGGGCATAGACCGATTCCATGTGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTGAGCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CAA 90 bp | AAAAGGCCAAGCCCTGGCTCTAGGGTGGCCAGATTGAGATTCTGGGCAACTCTAGTGGCCTCCAAAGTCTaGGTGGGCTGCAGGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: KRPSPGSRVARLRFWATLVASKV*VGCRPA Trigger: TGCTGGCCTGCAGCCCACCAAGACTTTGGAGGCCAC...TAGAGTTGCCCAGAATCTCAATCTGGCCACCCTAGAGCCAGGGCTTGGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 90 bp | CCAGAATTGATTGACATCGCTCAATGGGCCTCACCTTTGGCAGGGTaGTGGTGGCCACATGGAATCGGTCTATGCCCAGGGCACAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PELIDIAQWASPLAG*WWPHGIGLCPGHRD Trigger: GTCTCTGTGCCCTGGGCATAGACCGATTCCATGTGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTGAGCGATGTCAATCAATTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CAA 90 bp | GGGAAAACACATGCAGGGCTAAGACAGACCCACTTTAGAAAGTGGAGACCAGGGCAATGGGCCTCACCTTaGGCAGGGTGCTGGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GKTHAGLRQTHFRKWRPGQWASP*AGCWWP Trigger: TGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTG...CCCTGGTCTCCACTTTCTAAAGTGGGTCTGTCTTAGCCCTGCATGTGTTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 90 bp | ATCATGGAGCCCACCCAGATGACAGCTAGTTTAGCCAGAATTGATTaGCATCGCTCAATGGGCCTCACCTTTGGCAGGGTGCTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IMEPTQMTASLARID*HRSMGLTFGRVLVA Trigger: GGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTGAGCGATGTCAATCAATTCTGGCTAAACTAGCTGTCATCTGGGTGGGCTCCATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 90 bp | CTGGTAGGTCATCACCAGCGAATAGACAGATTCGGGCAGGTCAGCTaGAGGTTTCATGATACACGAGTCCACAGTTCCTGCGGTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LVGHHQRIDRFGQVS*RFHDTRVHSSCGGS Trigger: GCTCCCACCGCAGGAACTGTGGACTCGTGTATCATGAAACCTTCAGCTGACCTGCCCGAATCTGTCTATTCGCTGGTGATGACCTACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CAA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCAAGGTGGAGAACTGGTaGATGAGGCCCAGGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPKVENW*MRPRRS Trigger: GGACCTCCTGGGCCTCATCAACCAGTTCTCCACCTT...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CAA 90 bp | TCTAATGACCTAGACAGATCTCCATCTACAAGGAGGTGGAGATCTGGCAGGCCCTGCTGCTCCTGGACCTaGGCTCTATGCCCACCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SNDLDRSPSTRRWRSGRPCCSWT*ALCPPK Trigger: TTTAGGTGGGCATAGAGCCAAGGTCCAGGAGCAGCA...GGGCCTGCCAGATCTCCACCTCCTTGTAGATGGAGATCTGTCTAGGTCATTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CAA 90 bp | ACGGGAACAATGCAACTGAGAACCTCTGAGAACGGAAGACAGAGTGAGAGAATGCCATCCTTGTCTGGGTaGGGGCTAGTGGCCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: TGTMQLRTSENGRQSERMPSLSG*GLVASK Trigger: TTTGGAGGCCACTAGCCCCAACCCAGACAAGGATGG...CATTCTCTCACTCTGTCTTCCGTTCTCAGAGGTTCTCAGTTGCATTGTTCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 90 bp | AGTTCCAGGCACTCTTCAAGTAGTAGCTGTGCCACACAATGCACATaGCAGACAGATTGCCAACGATACCCACAGCAAACACCACCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SSRHSSSSSCATQCT*QTDCQRYPQQTPPE Trigger: CTCTGGTGGTGTTTGCTGTGGGTATCGTTGGCAATCTGTCTGTCATGTGCATTGTGTGGCACAGCTACTACTTGAAGAGTGCCTGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS-3UTR CAA 90 bp | GTAGATGGAGCTTTGAAAAGCCCAGACTTTGACAAGATGAGCCAAGTCCATCTCTGCTTGGTAATCTCATaGAAGATGACAATTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VDGALKSPDFDKMSQVHLCLVIS*KMTIGR Trigger: CCTCCCAATTGTCATCTTCAATGAGATTACCAAGCA...GAGATGGACTTGGCTCATCTTGTCAAAGTCTGGGCTTTTCAAAGCTCCATCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 72 bp | ACTGCTCATGCCTGCCCGCTCTACACTCAGGCTTCCTaGCTGGTGGGCCCCGCACCCGCCACGTCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TAHACPLYTQAS*LVGPAPATSPA Trigger: AGCTGGTGACGTGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCATGAGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | ATGCCTGCCCGCTCTACACTCAGGCTTCCTGCCTGGTaGGCCCCGCACCCGCCACGTCACCAGCTGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: MPARSTLRLPAW*APHPPRHQLTG Trigger: ACCTGTCAGCTGGTGACGTGGCGGGTGCGGGGCCCACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 72 bp | CATAGTGCTGTACCTCCTTGGGCCCCTCGTCCTTGGTaGCTCTTCGGGGTCGACTCTGCTGCTCCTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: HSAVPPWAPRPW*LFGVDSAAPGP Trigger: AGGTCCAGGAGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGACGAGGGGCCCAAGGAGGTACAGCACTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 72 bp | AGGCCGACCACGGTGCTGTTGAGCTGGCTCTCACACTaGTCATGCCTGCCCGCTCTACACTCAGGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RPTTVLLSWLSH*SCLPALHSGFL Trigger: CAGGAAGCCTGAGTGTAGAGCGGGCAGGCATGAGCAGTGTGAGAGCCAGCTCAACAGCACCGTGGTCGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CAA 72 bp | GGGGTGATGGCGCCCTTAAAGAAGGTGGAGAACTGGTaGATGAGGCCCAGGAGGTCCAGGGTCTGCCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GVMAPLKKVENW*MRPRRSRVCRV Trigger: CACGCGGCAGACCCTGGACCTCCTGGGCCTCATCAACCAGTTCTCCACCTTCTTTAAGGGCGCCATCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CAA 90 bp | AGGAGCACAGGGGTGATGGCGCCCTTAAAGAAGGTGGAGAACTGGTaGATGAGGCCCAGGAGGTCCAGGGTCTGCCGCGTGAGCTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSTGVMAPLKKVENW*MRPRRSRVCRVSSV Trigger: TACCGAGCTCACGCGGCAGACCCTGGACCTCCTGGGCCTCATCAACCAGTTCTCCACCTTCTTTAAGGGCGCCATCACCCCTGTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 72 bp | CGATACCCACAGCAAACACCACCAGAGCCAGGAGCATaGTGGCGTAGGCGCTGTAGGAGCTCTCGGTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: RYPQQTPPEPGA*WRRRCRSSRSP Trigger: CGGTGACCGAGAGCTCCTACAGCGCCTACGCCATCATGCTCCTGGCTCTGGTGGTGTTTGCTGTGGGTATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 72 bp | ACCACGGTGCTGTTGAGCTGGCTCTCACACTGCTCATaGCTGCCCGCTCTACACTCAGGCTTCCTGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TTVLLSWLSHCS*LPALHSGFLPG Trigger: ACCAGGCAGGAAGCCTGAGTGTAGAGCGGGCAGGCATGAGCAGTGTGAGAGCCAGCTCAACAGCACCGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | GTACATAGTGCTGTACCTCCTTGGGCCCCTCGTCCTTaGTGCCTCTTCGGGGTCGACTCTGCTGCTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VHSAVPPWAPRP*CLFGVDSAAPG Trigger: TCCAGGAGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGACGAGGGGCCCAAGGAGGTACAGCACTATGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | CCCGGTCAGGTTGACCCTCAGCTCTTGTCCATTACCTaGGGTGGCCCCATCCTTGTCTGGGTTGGGGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: PGQVDPQLLSIT*GGPILVWVGAS Trigger: ACTAGCCCCAACCCAGACAAGGATGGGGCCACCCCAGGTAATGGACAAGAGCTGAGGGTCAACCTGACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | GACATCGCTCAATGGGCCTCACCTTTGGCAGGGTGCTaGTGGCCACATGGAATCGGTCTATGCCCAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DIAQWASPLAGC*WPHGIGLCPGH Trigger: GTGCCCTGGGCATAGACCGATTCCATGTGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTGAGCGATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 72 bp | CCCTCGTCCTTGGTGCCTCTTCGGGGTCGACTCTGCTaGTCCTGGACCTTGGCTCTATGCCCACCTAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PSSLVPLRGRLC*SWTLALCPPKD Trigger: ATCTTTAGGTGGGCATAGAGCCAAGGTCCAGGAGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGACGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | CGGATACAGGGGGTTCTGAATCTGCAGCCTCTGACTTaGCGTCCCGGTCAGGTTGACCCTCAGCTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RIQGVLNLQPLT*RPGQVDPQLLS Trigger: GGACAAGAGCTGAGGGTCAACCTGACCGGGACGCCAAGTCAGAGGCTGCAGATTCAGAACCCCCTGTATCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | ATCGCTCAATGGGCCTCACCTTTGGCAGGGTGCTGGTaGCCACATGGAATCGGTCTATGCCCAGGGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: IAQWASPLAGCW*PHGIGLCPGHR Trigger: TCTGTGCCCTGGGCATAGACCGATTCCATGTGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTGAGCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CCA 72 bp | TCCTTGGTGCCTCTTCGGGGTCGACTCTGCTGCTCCTaGACCTTGGCTCTATGCCCACCTAAAGATGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLVPLRGRLCCS*TLALCPPKDEV Trigger: CACCTCATCTTTAGGTGGGCATAGAGCCAAGGTCCAGGAGCAGCAGAGTCGACCCCGAAGAGGCACCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CAA 72 bp | CCAGAATTGATTGACATCGCTCAATGGGCCTCACCTTaGGCAGGGTGCTGGTGGCCACATGGAATCGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PELIDIAQWASP*AGCWWPHGIGL Trigger: TAGACCGATTCCATGTGGCCACCAGCACCCTGCCAAAGGTGAGGCCCATTGAGCGATGTCAATCAATTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 72 bp | CCCACCCAGATGACAGCTAGTTTAGCCAGAATTGATTaGCATCGCTCAATGGGCCTCACCTTTGGCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTQMTASLARID*HRSMGLTFGRV Trigger: CACCCTGCCAAAGGTGAGGCCCATTGAGCGATGTCAATCAATTCTGGCTAAACTAGCTGTCATCTGGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS TCA 72 bp | CATCACCAGCGAATAGACAGATTCGGGCAGGTCAGCTaGAGGTTTCATGATACACGAGTCCACAGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HHQRIDRFGQVS*RFHDTRVHSSC Trigger: GCAGGAACTGTGGACTCGTGTATCATGAAACCTTCAGCTGACCTGCCCGAATCTGTCTATTCGCTGGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS GCA 72 bp | GGCACTGCCCGGCAAGAAACATCCCCGAGTAGCCTTTaGTTGGTAATCTCATTGAAGATGACAATTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTARQETSPSSL*LVISLKMTIGR Trigger: CCTCCCAATTGTCATCTTCAATGAGATTACCAAGCAAAGGCTACTCGGGGATGTTTCTTGCCGGGCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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| CDS CAA 72 bp | ACTGCCCGGCAAGAAACATCCCCGAGTAGCCTTTGCTaGGTAATCTCATTGAAGATGACAATTGGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TARQETSPSSLC*VISLKMTIGRQ Trigger: CTGCCTCCCAATTGTCATCTTCAATGAGATTACCAAGCAAAGGCTACTCGGGGATGTTTCTTGCCGGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027682.9 |
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