Pregenerated sensors for GPR137C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049092Ensembl transcript IDs: ENSMUST00000146150.3, ENSMUST00000147957.2, ENSMUST00000151749.2, ENSMUST00000226915.2, ENSMUST00000227009.2, ENSMUST00000227056.2, ENSMUST00000227086.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGTCCAGCCTCGACAGAGCTACCGGAGCTGCTACTTCTTACGATaGTTCTCTGTGGTCGCCACCAACGCCTTACGTGGAGGTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: PVQPRQSYRSCYFLR*FSVVATNALRGGLG Trigger: TCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGCTCTGTCGAGGCTGGACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR GCA 90 bp | CCAACCTCCCTCAACCCGGTCCAGCCTCGACAGAGCTACCGGAGCTaGTACTTCTTACGATGCTTCTCTGTGGTCGCCACCAACGCCTTA | + |
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Preference number: 1 (lower is better) Translates to: PTSLNPVQPRQSYRS*YFLRCFSVVATNAL Trigger: TAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGCTCTGTCGAGGCTGGACCGGGTTGAGGGAGGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CCA 90 bp | TACGATGCTTCTCTGTGGTCGCCACCAACGCCTTACGTGGAGGTCTaGGACATTGAACAAAGGGTGTCCCACTGCCTTAAGTTGTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: YDASLWSPPTPYVEV*DIEQRVSHCLKLSG Trigger: CCCCGACAACTTAAGGCAGTGGGACACCCTTTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CCA 90 bp | CTCGACAGAGCTACCGGAGCTGCTACTTCTTACGATGCTTCTCTGTaGTCGCCACCAACGCCTTACGTGGAGGTCTGGGACATTGAACAA | + |
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Preference number: 1 (lower is better) Translates to: LDRATGAATSYDASL*SPPTPYVEVWDIEQ Trigger: TTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGCTCTGTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR TCA 90 bp | AAGGGCTTTATGGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATTaGTCGTTCACCCCGTCGGGGAAGCGATCGATCAGAATTTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: KGFMEVLRLSRSIGY*SFTPSGKRSIRICA Trigger: TGCACAAATTCTGATCGATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
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| 3UTR CCA 90 bp | CGTCGTCACTGTCATACCGTCTTGGATTGTCGAAAAAGAAAGCCCTaGAGCTGTAGCTGTGGCTGCTTATCATGCCAGCAGGTGCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: RRHCHTVLDCRKRKP*SCSCGCLSCQQVPD Trigger: ATCTGGCACCTGCTGGCATGATAAGCAGCCACAGCTACAGCTCCAGGGCTTTCTTTTTCGACAATCCAAGACGGTATGACAGTGACGACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
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| 3UTR CCA 90 bp | CTACTTCTTACGATGCTTCTCTGTGGTCGCCACCAACGCCTTACGTaGAGGTCTGGGACATTGAACAAAGGGTGTCCCACTGCCTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: LLLTMLLCGRHQRLT*RSGTLNKGCPTALS Trigger: ACTTAAGGCAGTGGGACACCCTTTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR TCA 90 bp | ACCTTTAATCCTCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTaGGTTCCAGACCAGCCTGGTCTACATAGCAAGTTCCAGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: TFNPPTQEAETGESL*VPDQPGLHSKFQNS Trigger: GCTGTTCTGGAACTTGCTATGTAGACCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGAGGATTAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR TCA 90 bp | GTACTAATTCAGCCAAGGGACCAGTTACATCTACCTTCCTTCCCGTaGGTTCCCCAGTCTTGGCAAGTCGTCGTCACTGTCATACCGTCT | + |
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Preference number: 1 (lower is better) Translates to: VLIQPRDQLHLPSFP*VPQSWQVVVTVIPS Trigger: AGACGGTATGACAGTGACGACGACTTGCCAAGACTGGGGAACTCACGGGAAGGAAGGTAGATGTAACTGGTCCCTTGGCTGAATTAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
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| 3UTR GCA 90 bp | GTCTTGGATTGTCGAAAAAGAAAGCCCTGGAGCTGTAGCTGTGGCTaGTTATCATGCCAGCAGGTGCCAGATTCTGGTTTAATCTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VLDCRKRKPWSCSCG*LSCQQVPDSGLISV Trigger: CACAGAGATTAAACCAGAATCTGGCACCTGCTGGCATGATAAGCAGCCACAGCTACAGCTCCAGGGCTTTCTTTTTCGACAATCCAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
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| 3UTR GCA 90 bp | ACTGTCATCCAGAGCTGGGCATGGTGGTATACATCTATATTTCCTTaGATTTGGAAGGCTGAAGCAGGAGGATGGAGAGTTCAAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TVIQSWAWWYTSIFP*IWKAEAGGWRVQGQ Trigger: CTGGCCTTGAACTCTCCATCCTCCTGCTTCAGCCTTCCAAATGCAAGGAAATATAGATGTATACCACCATGCCCAGCTCTGGATGACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CCA 90 bp | AATCGCCAAAGCAAGCAGCAACTGGGACAAACACTAAGGGCTTTATaGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATTGATCGTTCA | + |
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Preference number: 1 (lower is better) Translates to: NRQSKQQLGQTLRAL*RSFDCPAALVIDRS Trigger: TGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCTTAGTGTTTGTCCCAGTTGCTGCTTGCTTTGGCGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
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| 3UTR CCA 90 bp | TATACATCTATATTTCCTTGCATTTGGAAGGCTGAAGCAGGAGGATaGAGAGTTCAAGGCCAGCCTGAAGTACATAGACAGTCTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: YTSIFPCIWKAEAGG*RVQGQPEVHRQSAS Trigger: TGAGGCAGACTGTCTATGTACTTCAGGCTGGCCTTGAACTCTCCATCCTCCTGCTTCAGCCTTCCAAATGCAAGGAAATATAGATGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR TCA 90 bp | GCCCTCAAAATCATGGCATTCTTCCAGCCTCTCCCTCCCAAGTGCTaGGATTATAGGTACATACCACACTTGACTTCAAATACTCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ALKIMAFFQPLPPKC*DYRYIPHLTSNTLL Trigger: TAAGAGAGTATTTGAAGTCAAGTGTGGTATGTACCTATAATCTCAGCACTTGGGAGGGAGAGGCTGGAAGAATGCCATGATTTTGAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CCA 90 bp | CAGATAGACATGATTGACAACCTTATACCCCCAACCTGTCTGAAATaGGTCAAATGTGCTGCAGAACAATGCAATCCAACCAGCAATTCC | + |
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Preference number: 1 (lower is better) Translates to: QIDMIDNLIPPTCLK*VKCAAEQCNPTSNS Trigger: GGAATTGCTGGTTGGATTGCATTGTTCTGCAGCACATTTGACCCATTTCAGACAGGTTGGGGGTATAAGGTTGTCAATCATGTCTATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR GCA 90 bp | TTTTCCTATTATGTTTGGCCACTTTCTTTCCCTTTGAGTGAGAGGTaGTGTCTGGTAGAAGATACAAGGGAACCCTTAAGGCATCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: FSYYVWPLSFPLSER*CLVEDTREPLRHPR Trigger: TCTTGGATGCCTTAAGGGTTCCCTTGTATCTTCTACCAGACAGCACCTCTCACTCAAAGGGAAAGAAAGTGGCCAAACATAATAGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CAA 90 bp | CTTCTCTGTGGTCGCCACCAACGCCTTACGTGGAGGTCTGGGACATaGAACAAAGGGTGTCCCACTGCCTTAAGTTGTCGGGGCACGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLCGRHQRLTWRSGT*NKGCPTALSCRGTH Trigger: ATGCGTGCCCCGACAACTTAAGGCAGTGGGACACCCTTTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGCAACTGGGACAAACACTAAGGGCTTTATGGAGGTCCTTCGACTGTCCAACAGCTCTGCCTGGTaGCGTAATGGCTGGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: QAATGTNTKGFMEVLRLSNSSAW*RNGWQR Trigger: CCGCTGCCAGCCATTACGTCACCAGGCAGAGCTGTT...GGACAGTCGAAGGACCTCCATAAAGCCCTTAGTGTTTGTCCCAGTTGCTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGCCTCTACTTCAGCATCCAACCTCCCTCAACCCGGTCCAGCCTCGACATCCAAAAGCTGGCTATaGCAGCAGTGCCCACAATTC | + |
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Preference number: 2 (lower is better) Translates to: RAASTSASNLPQPGPASTSKSWL*QQCPQF Trigger: GAATTGTGGGCACTGCTGCCATAGCCAGCTTTTGGA...TGTCGAGGCTGGACCGGGTTGAGGGAGGTTGGATGCTGAAGTAGAGGCAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CAA 90 bp | ATGCTGGCACCTACAGTTACAGTTGTAAGCTACCACCGGCAGCTGTaGGGCACTGGACAGTCTTCTGTGAGAGCAGCAAGTGCTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: MLAPTVTVVSYHRQL*GTGQSSVRAASALN Trigger: GTTAAGAGCACTTGCTGCTCTCACAGAAGACTGTCCAGTGCCCAACAGCTGCCGGTGGTAGCTTACAACTGTAACTGTAGGTGCCAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147957.2 ENSMUST00000227086.2 |
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| 3UTR CAA 90 bp | CAAACACTAAGGGCTTTATGGAGGTCCTTCGACTGTCCCGCAGCATaGGTTATTGATCGTTCACCCCGTCGGGGAAGCGATCGATCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QTLRALWRSFDCPAA*VIDRSPRRGSDRSE Trigger: TTCTGATCGATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCTTAGTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCAGCATTGGTTATTGATCGTTCACCCCGTCGGGGAAGCGATCGATCAGAATCAGCTTCAGCAGAGCTaGCTCTACTTCAGCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: PQHWLLIVHPVGEAIDQNQLQQS*LYFSIQ Trigger: TTGGATGCTGAAGTAGAGGCAGCTCTGCTGAAGCTG...ATTCTGATCGATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTGAGTTCCAGACCAGCCTGGCCTCAAGTGTGGCTTTaGGCATGGCAGAATATTCTT | + |
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Preference number: 2 (lower is better) Translates to: SHSGGRDRRISVSSRPAWPQVWL*AWQNIL Trigger: AAGAATATTCTGCCATGCCCAAAGCCACACTTGAGG...CCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAGTCTTGGCAAGTCGTCGTCACTGTCATACCGTCTTGGATTGTCGAAAAGACCATGCTGGTACATaGTCCCACAGAAAGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: SPVLASRRHCHTVLDCRKDHAGT*SHRKRT Trigger: GGTCCTCTTTCTGTGGGAGCATGTACCAGCATGGTC...TTTTCGACAATCCAAGACGGTATGACAGTGACGACGACTTGCCAAGACTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAATCGCCAAAGCAAGCAGCAACTGGGACAAACACTAAGGGCTTTATGGAGGTACGATGCTTCTCTGTaGTCGCCACCAACGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LNRQSKQQLGQTLRALWRYDASL*SPPTPY Trigger: GTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTA...CCTCCATAAAGCCCTTAGTGTTTGTCCCAGTTGCTGCTTGCTTTGGCGATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTGAGTTCCAGACCAGCCTGGAACATTTCTCCTGTTTaGTTGTTAATTCCATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SHSGGRDRRISVSSRPAWNISPV*LLIPCW Trigger: CCAGCATGGAATTAACAAGCAAACAGGAGAAATGTT...CCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTATGTGCATGTGAATGCAGGTATGCTGGCACCTACAGTTACAGTTGTAAGACACTAAGGGCTTTATaGAGGTCCTTCGACTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GVCACECRYAGTYSYSCKTLRAL*RSFDCP Trigger: GGGACAGTCGAAGGACCTCCATAAAGCCCTTAGTGT...CTTACAACTGTAACTGTAGGTGCCAGCATACCTGCATTCACATGCACATACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAGTCTTGGCAAGTCGTCGTCACTGTCATACCGTCTTGGATTGTCGAAAATTTCCGTCTTCTCCCTaGGCCTTATCTGAAAGATTA | + |
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Preference number: 2 (lower is better) Translates to: SPVLASRRHCHTVLDCRKFPSSP*ALSERL Trigger: TAATCTTTCAGATAAGGCTCAGGGAGAAGACGGAAA...TTTTCGACAATCCAAGACGGTATGACAGTGACGACGACTTGCCAAGACTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAATTCTGTGCACTGATCACACTTTAAAGCTGTCACTGGGTAAGGTAGAGGTAAATATTCTGGTGTaGATCCTCAAGTGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ASILCTDHTLKLSLGKVEVNILV*ILKCGF Trigger: AAAGCCACACTTGAGGATTCACACCAGAATATTTAC...CTCTACCTTACCCAGTGACAGCTTTAAAGTGTGATCAGTGCACAGAATTGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR GCA 90 bp | AAATGCATCTGTAAACTTGTTTTGTCCCAAGACACTCTACTGAAGCCCCCTGTGAGTTGCAATAGATGGTaGAGTGTTGATGCAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: KCICKLVLSQDTLLKPPVSCNRW*SVDADG Trigger: ACCATCTGCATCAACACTGCACCATCTATTGCAACT...CACAGGGGGCTTCAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGATGCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTCTCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCTCCAAAAGCTGGCTATaGCAGCAGTGCCCACAATTC | + |
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Preference number: 2 (lower is better) Translates to: KLSLQLCYSMKNPKAGYGSKSWL*QQCPQF Trigger: GAATTGTGGGCACTGCTGCCATAGCCAGCTTTTGGA...GCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000147957.2 ENSMUST00000227009.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAACAGGCACAGGTTAAGCTTGTATCTTCTCTCCTAATTAGCTCTCCCCCATTCTGGCCTGATCCATaGTTCTTTATAATGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LQQAQVKLVSSLLISSPPFWPDP*FFIMKS Trigger: ACTTTTCATTATAAAGAACCATGGATCAGGCCAGAA...TGGGGGAGAGCTAATTAGGAGAGAAGATACAAGCTTAACCTGTGCCTGTTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGTCATGTTTACCTGTGTaGCAGCTTCCTAAACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QRSTFIGHSYTFATSLKLSCLPV*QLPKQP Trigger: AGGCTGTTTAGGAAGCTGTCACACAGGTAAACATGA...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR TCA 90 bp | TGCATAGACCAATACCGTTCTATATTAGTCAGTATTAAGTGTATGATGTCACCTCTGGACAGTCTTCTGTaGGAGCAGCAAGTGCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: CIDQYRSILVSIKCMMSPLDSLL*EQQVLL Trigger: TAAGAGCACTTGCTGCTCTCACAGAAGACTGTCCAG...AGGTGACATCATACACTTAATACTGACTAATATAGAACGGTATTGGTCTATGCA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGCTCAATTCTGTGCACTaGTCACACTTTAAAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FGFVPSQRTGRINNVFLKLNSVH*SHFKAV Trigger: GACAGCTTTAAAGTGTGATCAGTGCACAGAATTGAG...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCAGCAACTTTGCTATAGTATaGAGAATCCAAAAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSLQLCYSMKNPKAGYGSNFAIV*RIQKLA Trigger: AGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTT...GCTGCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000147957.2 ENSMUST00000227009.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGATGCTGAGGCATGTGAGTTTTAAGTTTGATAACATCTTGGGCTACACAAACTTTGCTATAGTATaGAGAATCCAAAAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LGMLRHVSFKFDNILGYTNFAIV*RIQKLA Trigger: AGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTT...TGTGTAGCCCAAGATGTTATCAAACTTAAAACTCACATGCCTCAGCATCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227009.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTTGGAACTGTGTTAATTCTCATCACCTCCAAAAGCCTTTGAGAGGATTAATGGGTCAAATGTGCTaGAGAACAATGCAATCCAAC | + |
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Preference number: 2 (lower is better) Translates to: FPWNCVNSHHLQKPLRGLMGQMC*RTMQSN Trigger: GTTGGATTGCATTGTTCTGCAGCACATTTGACCCAT...TAATCCTCTCAAAGGCTTTTGGAGGTGATGAGAATTAACACAGTTCCAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGTTTAAGAAACCCCTCTaGCTTTCCAAAGAACACTGC | + |
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Preference number: 2 (lower is better) Translates to: FGFVPSQRTGRINNVFLKFKKPL*LSKEHC Trigger: GCAGTGTTCTTTGGAAAGCCAGAGGGGTTTCTTAAA...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTTTCCTTGGAACTGTGTTAATTCTCATCACCTCCAAAAGCCTTTGAGAGGAAAAAACATAGTTCCGTaGTTTGTTTCTGCAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: TFPWNCVNSHHLQKPLRGKNIVP*FVSATG Trigger: GCCTGTTGCAGAAACAAACCACGGAACTATGTTTTT...TCCTCTCAAAGGCTTTTGGAGGTGATGAGAATTAACACAGTTCCAAGGAAAAGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| 3UTR CAA 90 bp | AGCTATATCTCCAGACTTTTGTTAGTTGCAATAGATGGTGCAGTGTaGATGCAGATGGTTGTAAAGATGTTGAATACACGTACACGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SYISRLLLVAIDGAV*MQMVVKMLNTRTRS Trigger: TGAACGTGTACGTGTATTCAACATCTTTACAACCATCTGCATCAACACTGCACCATCTATTGCAACTAACAAAAGTCTGGAGATATAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGGTTAGTTGCAATAGATaGTGCAGTGTTGATGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: FGFVPSQRTGRINNVFLKVSCNR*CSVDAD Trigger: ATCTGCATCAACACTGCACCATCTATTGCAACTAAC...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTCTCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCAGTTTGATAACATCTTaGGCTACACAGCACATTCCA | + |
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Preference number: 2 (lower is better) Translates to: KLSLQLCYSMKNPKAGYGSLITS*ATQHIP Trigger: TGGAATGTGCTGTGTAGCCCAAGATGTTATCAAACT...GCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227009.2 ENSMUST00000227086.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGGTAAAAGTGCAAATATaGAAATGTGCGCTCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: QRSTFIGHSYTFATSLKLVKVQI*KCALHV Trigger: AACATGGAGCGCACATTTGCATATTTGCACTTTTAC...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| 3UTR CCA 72 bp | GCTACCGGAGCTGCTACTTCTTACGATGCTTCTCTGTaGTCGCCACCAACGCCTTACGTGGAGGTCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ATGAATSYDASL*SPPTPYVEVWD Trigger: GTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR GCA 72 bp | CCTCGACAGAGCTACCGGAGCTGCTACTTCTTACGATaGTTCTCTGTGGTCGCCACCAACGCCTTACGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PRQSYRSCYFLR*FSVVATNALRG Trigger: TCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGCTCTGTCGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR CCA 72 bp | GGGCTTTATGGAGGTCCTTCGACTGTCCCGCAGCATTaGTTATTGATCGTTCACCCCGTCGGGGAAGCGATC | + |
|
Preference number: 3 (lower is better) Translates to: GLYGGPSTVPQH*LLIVHPVGEAI Trigger: GATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| 3UTR TCA 72 bp | CAGCCAAGGGACCAGTTACATCTACCTTCCTTCCCGTaGGTTCCCCAGTCTTGGCAAGTCGTCGTCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QPRDQLHLPSFP*VPQSWQVVVTV Trigger: GACAGTGACGACGACTTGCCAAGACTGGGGAACTCACGGGAAGGAAGGTAGATGTAACTGGTCCCTTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| 3UTR TCA 72 bp | ATGGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATTaGTCGTTCACCCCGTCGGGGAAGCGATCGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MEVLRLSRSIGY*SFTPSGKRSIR Trigger: TCTGATCGATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| 3UTR CCA 72 bp | TCTCTGTGGTCGCCACCAACGCCTTACGTGGAGGTCTaGGACATTGAACAAAGGGTGTCCCACTGCCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLWSPPTPYVEV*DIEQRVSHCLK Trigger: CTTAAGGCAGTGGGACACCCTTTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR CCA 72 bp | ACGATGCTTCTCTGTGGTCGCCACCAACGCCTTACGTaGAGGTCTGGGACATTGAACAAAGGGTGTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: TMLLCGRHQRLT*RSGTLNKGCPT Trigger: AGTGGGACACCCTTTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR TCA 72 bp | CCTCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTaGGTTCCAGACCAGCCTGGTCTACATAGCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PPTQEAETGESL*VPDQPGLHSKF Trigger: GAACTTGCTATGTAGACCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR GCA 72 bp | GTTCACCCCGTCGGGGAAGCGATCGATCAGAATTTGTaGAAGGTGTATCGAGCCACAGTTAAGGAGATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: VHPVGEAIDQNL*KVYRATVKEMR Trigger: CCGCATCTCCTTAACTGTGGCTCGATACACCTTGCACAAATTCTGATCGATCGCTTCCCCGACGGGGTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| 3UTR TCA 72 bp | ACCACCGGCAGCTGTTGGGCACTGGACAGTCTTCTGTaGGAGCAGCAAGTGCTCTTAACTGATATCTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TTGSCWALDSLL*EQQVLLTDIFW Trigger: CCAGAAGATATCAGTTAAGAGCACTTGCTGCTCTCACAGAAGACTGTCCAGTGCCCAACAGCTGCCGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147957.2 ENSMUST00000227086.2 |
||
| 3UTR TCA 72 bp | GCATCTGTAAACTTGTTTTGTCCCAAGACACTCTACTaGAGCCCCCTGTGCAAAGGTCACGACTGCTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ASVNLFCPKTLY*SPLCKGHDCFW Trigger: CCAGAAGCAGTCGTGACCTTTGCACAGGGGGCTTCAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR CCA 72 bp | CAGTCTTGGCAAGTCGTCGTCACTGTCATACCGTCTTaGATTGTCGAAAAAGAAAGCCCTGGAGCTGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSWQVVVTVIPS*IVEKESPGAVA Trigger: AGCTACAGCTCCAGGGCTTTCTTTTTCGACAATCCAAGACGGTATGACAGTGACGACGACTTGCCAAGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| 3UTR CCA 72 bp | AGCAAGCAGCAACTGGGACAAACACTAAGGGCTTTATaGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SKQQLGQTLRAL*RSFDCPAALVI Trigger: AATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCTTAGTGTTTGTCCCAGTTGCTGCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| 3UTR CCA 72 bp | CTTGACCAGTCCTCTTCAAAGCCACACAGTCTCCACTaGCTTACTGTTCCTTTTAAGAAACCCCTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LDQSSSKPHSLH*LTVPFKKPLWL Trigger: AAGCCAGAGGGGTTTCTTAAAAGGAACAGTAAGCCAGTGGAGACTGTGTGGCTTTGAAGAGGACTGGTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR TCA 72 bp | GTTGGTAGATCCTATGTGGGGTCATGTTTACCTGTGTaGCAGCTTCCTAAACAGCCTGTCCACTCAGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: VGRSYVGSCLPV*QLPKQPVHSEY Trigger: GTATTCTGAGTGGACAGGCTGTTTAGGAAGCTGTCACACAGGTAAACATGACCCCACATAGGATCTACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR GCA 72 bp | TATACCCCCAACCTGTCTGAAATGGGTCAAATGTGCTaGAGAACAATGCAATCCAACCAGCAATTCCCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: YTPNLSEMGQMC*RTMQSNQQFPV Trigger: TACGGGGAATTGCTGGTTGGATTGCATTGTTCTGCAGCACATTTGACCCATTTCAGACAGGTTGGGGGTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR CCA 72 bp | TTCGTCCCAGTTCCAAAGCAGTTGGTAGATCCTATGTaGGGTCATGTTTACCTGTGTGACAGCTTCCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FVPVPKQLVDPM*GHVYLCDSFLN Trigger: GTTTAGGAAGCTGTCACACAGGTAAACATGACCCCACATAGGATCTACCAACTGCTTTGGAACTGGGACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR CCA 72 bp | TGGGCATGGTGGTATACATCTATATTTCCTTGCATTTaGAAGGCTGAAGCAGGAGGATGGAGAGTTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WAWWYTSIFPCI*KAEAGGWRVQG Trigger: GCCTTGAACTCTCCATCCTCCTGCTTCAGCCTTCCAAATGCAAGGAAATATAGATGTATACCACCATGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR GCA 72 bp | TATGTTTGGCCACTTTCTTTCCCTTTGAGTGAGAGGTaGTGTCTGGTAGAAGATACAAGGGAACCCTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YVWPLSFPLSER*CLVEDTREPLR Trigger: CCTTAAGGGTTCCCTTGTATCTTCTACCAGACAGCACCTCTCACTCAAAGGGAAAGAAAGTGGCCAAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGGAGGAAGGGCTGGAATaGTCATGTGCTTCAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QRSTFIGHSYTFATSLKLEEGLE*SCASVQ Trigger: CTGCACTGAAGCACATGACAATTCCAGCCCTTCCTC...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR TCA 72 bp | TGGTCAACAAACTCTCTCTACAACTTTGCTATAGTATaGAGAATCCAAAAGCTGGCTATGGCAGCAGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: WSTNSLYNFAIV*RIQKLAMAAVP Trigger: GGGCACTGCTGCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAGTTTGTTGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147957.2 ENSMUST00000227009.2 ENSMUST00000227086.2 |
||
| 3UTR TCA 72 bp | GTCTCCTCCATTTCCGTCTTCTCCCTGAGCCTTATCTaGAAGATTATCCCAGCCATAATTAAATGGACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSISVFSLSLI*KIIPAIIKWTL Trigger: GAGAGTCCATTTAATTATGGCTGGGATAATCTTTCAGATAAGGCTCAGGGAGAAGACGGAAATGGAGGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| 3UTR TCA 72 bp | ATCATGGCATTCTTCCAGCCTCTCCCTCCCAAGTGCTaGGATTATAGGTACATACCACACTTGACTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: IMAFFQPLPPKC*DYRYIPHLTSN Trigger: ATTTGAAGTCAAGTGTGGTATGTACCTATAATCTCAGCACTTGGGAGGGAGAGGCTGGAAGAATGCCATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR CCA 72 bp | ATGATTGACAACCTTATACCCCCAACCTGTCTGAAATaGGTCAAATGTGCTGCAGAACAATGCAATCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: MIDNLIPPTCLK*VKCAAEQCNPT Trigger: GGTTGGATTGCATTGTTCTGCAGCACATTTGACCCATTTCAGACAGGTTGGGGGTATAAGGTTGTCAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR GCA 72 bp | ATAGGCCATATTGTCTTAGAACTATGTAGTTTAGGATaGCCTCAAAATCATGGCATTCTTCCAGCCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IGHIVLELCSLG*PQNHGILPASP Trigger: GGGAGAGGCTGGAAGAATGCCATGATTTTGAGGGCATCCTAAACTACATAGTTCTAAGACAATATGGCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAATTCTGTGCACTGATCACACTTTAAAGCTGTCACTGGGTAAGGTAGAGATGGTTGTAAAGATGTaGAATACACGTACACGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASILCTDHTLKLSLGKVEMVVKM*NTRTRS Trigger: TGAACGTGTACGTGTATTCAACATCTTTACAACCAT...CTCTACCTTACCCAGTGACAGCTTTAAAGTGTGATCAGTGCACAGAATTGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR GCA 72 bp | CTACAGTATTTCATGATCATATGTATTGATGTATATTaGCAGATCCCTGGTTCGATGGGAGGGCTAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LQYFMIICIDVY*QIPGSMGGLEC Trigger: GCATTCTAGCCCTCCCATCGAACCAGGGATCTGGCAATATACATCAATACATATGATCATGAAATACTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGATCTGTAAACTTGTTTaGTCCCAAGACACTCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: FGFVPSQRTGRINNVFLKICKLV*SQDTLL Trigger: CAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGAT...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR TCA 72 bp | GCAAACACGGGGGCAGATTTCTTTGGTGATGTATTGTaGGATGTACATGAGACAAATGTTAAGAATTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ANTGADFFGDVL*DVHETNVKNLG Trigger: ACCTAAATTCTTAACATTTGTCTCATGTACATCTCACAATACATCACCAAAGAAATCTGCCCCCGTGTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR GCA 72 bp | TTCTCATCACCTCCAAAAGCCTTTGAGAGGATTAGCTaGATAGACCAATACCGTTCTATATTAGTCAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: FSSPPKAFERIS*IDQYRSILVSI Trigger: AATACTGACTAATATAGAACGGTATTGGTCTATGCAGCTAATCCTCTCAAAGGCTTTTGGAGGTGATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGATTTCTCCTGTTTGCTaGTTAATTCCATGCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FGFVPSQRTGRINNVFLKISPVC*LIPCWN Trigger: ATTCCAGCATGGAATTAACAAGCAAACAGGAGAAAT...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR GCA 72 bp | CTATATCTCCAGACTTTTGTTAGTTGCAATAGATGGTaGAGTGTTGATGCAGATGGTTGTAAAGATGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYLQTFVSCNRW*SVDADGCKDVE Trigger: TTCAACATCTTTACAACCATCTGCATCAACACTGCACCATCTATTGCAACTAACAAAAGTCTGGAGATATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR GCA 72 bp | GGCAAAGTACTACAACGTGTAACTTGTAGATCCTTCTaGTTCTGTCATCTAGGTATAAGGATTACAAATATG | + |
|
Preference number: 3 (lower is better) Translates to: GKVLQRVTCRSF*FCHLGIRITNM Trigger: CATATTTGTAATCCTTATACCTAGATGACAGAAGCAGAAGGATCTACAAGTTACACGTTGTAGTACTTTGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | CCACCGGCAGCTGTTGGGCACTGGACAGTCTTCTGTGAGAGCAGCAAGTGCTCTGGGGCAGAGAGCCGCTaGGGGAGAAGGCGGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPAAVGHWTVFCESSKCSGAESR*GRRRPR Trigger: TCTCGGCCGCCTTCTCCCTCAGCGGCTCTCTGCCCC...AGAGCACTTGCTGCTCTCACAGAAGACTGTCCAGTGCCCAACAGCTGCCGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147957.2 ENSMUST00000227086.2 |
||
| CDS-3UTR GCA 90 bp | TCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTGAGTTCCAGACCAGCCTGGCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSGGRDRRISVSSRPAWRGPER*PRETQE Trigger: TTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACG...CCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR TCA 90 bp | CTGCTACTTCTTACGATGCTTCTCTGTGGTCGCCACCAACGCCTTACGTGGAGGAGAGGCTCTGGTAACTaGGCCGCCGCTCGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLTMLLCGRHQRLTWRRGSGN*AAARGT Trigger: TGTACCGCGAGCGGCGGCTCAGTTACCAGAGCCTCT...CCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGGGCTTTATGGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATTGATCGTGGGGCAGAGAGCCGCTaGGGGAGAAGGCGGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRALWRSFDCPAALVIDRGAESR*GRRRPR Trigger: TCTCGGCCGCCTTCTCCCTCAGCGGCTCTCTGCCCC...ACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | CTACACAGCACATTCCAGGCCAGTCTGAGCTCACTAGCATGTCCATCTGAAAACGGGGCAGAGAGCCGCTaGGGGAGAAGGCGGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSTFQASLSSLACPSENGAESR*GRRRPR Trigger: TCTCGGCCGCCTTCTCCCTCAGCGGCTCTCTGCCCC...GTTTTCAGATGGACATGCTAGTGAGCTCAGACTGGCCTGGAATGTGCTGTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGCTACACAGCACATTCCAGGCCAGTCTGAGCTCACTAGCATGTCCATCTCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLHSTFQASLSSLACPSRGPER*PRETQE Trigger: TTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACG...AGATGGACATGCTAGTGAGCTCAGACTGGCCTGGAATGTGCTGTGTAGCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227009.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | CTCCACTGGCTTACTGTTCCTTTTAAGAAACCCCTCTGGCTTTCCAAAGAACACGGGGCAGAGAGCCGCTaGGGGAGAAGGCGGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHWLTVPFKKPLWLSKEHGAESR*GRRRPR Trigger: TCTCGGCCGCCTTCTCCCTCAGCGGCTCTCTGCCCC...GTGTTCTTTGGAAAGCCAGAGGGGTTTCTTAAAAGGAACAGTAAGCCAGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR CAA 72 bp | GGTCGCCACCAACGCCTTACGTGGAGGTCTGGGACATaGAACAAAGGGTGTCCCACTGCCTTAAGTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHQRLTWRSGT*NKGCPTALSCR Trigger: CCGACAACTTAAGGCAGTGGGACACCCTTTGTTCAATGTCCCAGACCTCCACGTAAGGCGTTGGTGGCGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGGGGTATGTGCATGTGAATGCAGGTATGCTGGCACCTACAGTTACAGTTAGAGGCTCTGGTAACTaGGCCGCCGCTCGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VRGYVHVNAGMLAPTVTVRGSGN*AAARGT Trigger: TGTACCGCGAGCGGCGGCTCAGTTACCAGAGCCTCT...AACTGTAACTGTAGGTGCCAGCATACCTGCATTCACATGCACATACCCCCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147957.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTAAGTTTGATAACATCTTGGGCTACACAGCACATTCCAGGCCAGTCTGAGGGGGCAGAGAGCCGCTaGGGGAGAAGGCGGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLITSWATQHIPGQSEGAESR*GRRRPR Trigger: TCTCGGCCGCCTTCTCCCTCAGCGGCTCTCTGCCCC...CTCAGACTGGCCTGGAATGTGCTGTGTAGCCCAAGATGTTATCAAACTTAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000227009.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACAATAGCGGAGGAACAGCTCTGCCTGGTGACGTAATGGCTGGCAGCGGTATCAGCGGCTTAAGTTaGGGGAGAGGGAAAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNNSGGTALPGDVMAGSGISGLS*GRGKDR Trigger: CCTGTCTTTCCCTCTCCCTCAACTTAAGCCGCTGAT...ACCGCTGCCAGCCATTACGTCACCAGGCAGAGCTGTTCCTCCGCTATTGTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR GCA 90 bp | TCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTGAGTTCCAGACCAGCCTGGAGCTGTAGCTGTGGCTaGTTATCATGCCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSGGRDRRISVSSRPAWSCSCG*LSCQQV Trigger: CACCTGCTGGCATGATAAGCAGCCACAGCTACAGCT...CCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR CAA 72 bp | TATGGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATaGATCGTTCACCCCGTCGGGGAAGCGATCGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YGGPSTVPQHWL*IVHPVGEAIDQ Trigger: CTGATCGATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| 3UTR CAA 72 bp | AGGGCTTTATGGAGGTCCTTCGACTGTCCCGCAGCATaGGTTATTGATCGTTCACCCCGTCGGGGAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RALWRSFDCPAA*VIDRSPRRGSD Trigger: ATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| CDS-3UTR GCA 90 bp | ACAAACACTAAGGGCTTTATGGAGGTCCTTCGACTGTCCCGCAGCATTGGTTATCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNTKGFMEVLRLSRSIGYRGPER*PRETQE Trigger: TTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACG...ATAACCAATGCTGCGGGACAGTCGAAGGACCTCCATAAAGCCCTTAGTGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| CDS-3UTR GCA 90 bp | CTAAATCGCCAAAGCAAGCAGCAACTGGGACAAACACTAAGGGCTTTATGGAGGCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRQSKQQLGQTLRALWRRGPER*PRETQE Trigger: TTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACG...CCTCCATAAAGCCCTTAGTGTTTGTCCCAGTTGCTGCTTGCTTTGGCGATTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| 3UTR CAA 72 bp | CCTACAGTTACAGTTGTAAGCTACCACCGGCAGCTGTaGGGCACTGGACAGTCTTCTGTGAGAGCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTVTVVSYHRQL*GTGQSSVRAAS Trigger: ACTTGCTGCTCTCACAGAAGACTGTCCAGTGCCCAACAGCTGCCGGTGGTAGCTTACAACTGTAACTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147957.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCATCTGTAAACTTGTTTTGTCCCAAGACACTCTACTGAAGCCCCCTGTGAGAGGCTCTGGTAACTaGGCCGCCGCTCGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KCICKLVLSQDTLLKPPVRGSGN*AAARGT Trigger: TGTACCGCGAGCGGCGGCTCAGTTACCAGAGCCTCT...CACAGGGGGCTTCAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGATGCATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR TCA 90 bp | TCCCACTCAGGAGGCAGAGACAGGAGAATCTCTGTGAGTTCCAGACCAGCCTGGCTAAATTACTGCACGTaGAGAGCAAAGGAGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSGGRDRRISVSSRPAWLNYCT*RAKEQC Trigger: ACACTGCTCCTTTGCTCTTCACGTGCAGTAATTTAG...CCAGGCTGGTCTGGAACTCACAGAGATTCTCCTGTCTCTGCCTCCTGAGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTCTGCAACAGGCACAGGTTAAGCTTGTATCTTCTCTCCTAATTAGCAGAGGCTCTGGTAACTaGGCCGCCGCTCGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLFLQQAQVKLVSSLLISRGSGN*AAARGT Trigger: TGTACCGCGAGCGGCGGCTCAGTTACCAGAGCCTCT...GCTAATTAGGAGAGAAGATACAAGCTTAACCTGTGCCTGTTGCAGAAACAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTTGATGCAGATGGTTGTAAAGATGTTGAATACACGTACACGTTCATGGCATTCAGTGGGGGTGTaGCTGTGTAGGTGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLMQMVVKMLNTRTRSWHSVGV*LCRCRR Trigger: GCGGCGGCACCTACACAGTCACACCCCCACTGAATG...CCATGAACGTGTACGTGTATTCAACATCTTTACAACCATCTGCATCAACACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCAGCCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQLCYSMKNPKAGYGSRGPER*PRETQE Trigger: TTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACG...GCTGCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147957.2 ENSMUST00000227009.2 ENSMUST00000227086.2 |
||
| CDS-3UTR CCA 90 bp | AAATGCATCTGTAAACTTGTTTTGTCCCAAGACACTCTACTGAAGCCCCCTGTGCGCCACACCCAGTCATaGTGCCGTACCAGCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCICKLVLSQDTLLKPPVRHTQS*CRTSPK Trigger: CTTTGGGCTGGTACGGCACCATGACTGGGTGTGGCG...CACAGGGGGCTTCAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGATGCATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR CAA 72 bp | ATCGTTCACCCCGTCGGGGAAGCGATCGATCAGAATTaGTGCAAGGTGTATCGAGCCACAGTTAAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: IVHPVGEAIDQN*CKVYRATVKEM Trigger: CATCTCCTTAACTGTGGCTCGATACACCTTGCACAAATTCTGATCGATCGCTTCCCCGACGGGGTGAACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226915.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCAGCAGTAGAGGCTCTGGTAACTaGGCCGCCGCTCGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SLQLCYSMKNPKAGYGSSRGSGN*AAARGT Trigger: TGTACCGCGAGCGGCGGCTCAGTTACCAGAGCCTCT...ACTGCTGCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147957.2 ENSMUST00000227009.2 ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCCAGTCTTGGCAAGTCGTCGTCACTGTCATACCGTCTTGGATTGTCGAAACAGAGACATACCCTGTaGGGACATGGAACCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSLGKSSSLSYRLGLSKQRHTL*GHGTSR Trigger: TCTTGAGGTTCCATGTCCTCACAGGGTATGTCTCTG...TTTCGACAATCCAAGACGGTATGACAGTGACGACGACTTGCCAAGACTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGTCGTCGTCACTGTCATACCGTCTTGGATTGTCGAAAAAGAAAGCCCTCCCACGATGACAGTCTaGCACAGAGACATACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WQVVVTVIPSWIVEKESPPTMTV*HRDIPC Trigger: ACAGGGTATGTCTCTGTGCCAGACTGTCATCGTGGG...AGGGCTTTCTTTTTCGACAATCCAAGACGGTATGACAGTGACGACGACTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| CDS-3UTR TCA 90 bp | AAATGCATCTGTAAACTTGTTTTGTCCCAAGACACTCTACTGAAGCCCCCTGTGCTACAGAGCCCACGATaGCAGTCTGGCACAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KCICKLVLSQDTLLKPPVLQSPR*QSGTET Trigger: TGTCTCTGTGCCAGACTGTCATCGTGGGCTCTGTAG...CACAGGGGGCTTCAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGATGCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCAGCAGTCTCCCGCCTTACCTCTaGCAGGTAGAGGTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQLCYSMKNPKAGYGSSLPPYL*QVEVEE Trigger: CTCCTCAACCTCTACCTGGCAGAGGTAAGGCGGGAG...ACTGCTGCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR CCA 90 bp | TACTACTGTGTGTGTGTTATGTTTGTGTGTCCACATGAACACAAGGGTGCACGTTCTGGGACATCTCCGTaGACTAGCATTGCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YYCVCVMFVCPHEHKGARSGTSP*TSIAQV Trigger: GACCTGTGCAATGCTAGTCCACGGAGATGTCCCAGA...ACGTGCACCCTTGTGTTCATGTGGACACACAAACATAACACACACACAGTAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CCA 90 bp | AAATGCATCTGTAAACTTGTTTTGTCCCAAGACACTCTACTGAAGCCCCCTGTGCACAGGTCCATTCAGTaGGGGTGTGACTGTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCICKLVLSQDTLLKPPVHRSIQ*GCDCVG Trigger: ACCTACACAGTCACACCCCCACTGAATGGACCTGTG...CACAGGGGGCTTCAGTAGAGTGTCTTGGGACAAAACAAGTTTACAGATGCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CCA 90 bp | CATAGTTCCGTGGTTTGTTTCTGCAACAGGCACAGGTTAAGCTTGTATCTTCTCTACGATGCTTCTCTGTaGTCGCCACCAACGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSVVCFCNRHRLSLYLLYDASL*SPPTPY Trigger: GTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTA...GAGAAGATACAAGCTTAACCTGTGCCTGTTGCAGAAACAAACCACGGAACTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226915.2 |
||
| CDS-3UTR CCA 90 bp | TACTACTGTGTGTGTGTTATGTTTGTGTGTCCACATGAACACAAGGGTGCACGTCCCACGATGACAGTCTaGCACAGAGACATACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YYCVCVMFVCPHEHKGARPTMTV*HRDIPF Trigger: AAAGGGTATGTCTCTGTGCCAGACTGTCATCGTGGG...ACGTGCACCCTTGTGTTCATGTGGACACACAAACATAACACACACACAGTAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| 3UTR CAA 72 bp | GTGTTGTTTGGGCCTACTACTGTGTGTGTGTTATGTTaGTGTGTCCACATGAACACAAGGGTGCACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLFGPTTVCVLC*CVHMNTRVHVS Trigger: ACTCACGTGCACCCTTGTGTTCATGTGGACACACAAACATAACACACACACAGTAGTAGGCCCAAACAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCAATTCTGTGCACTGATCACACTTTAAAGCTGTCACTGGGTAAGGTAGAGACAGTCCATTTCAATTaGTTTTCTGGGACATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASILCTDHTLKLSLGKVETVHFN*FSGTSP Trigger: CGGAGATGTCCCAGAAAATCAATTGAAATGGACTGT...CTCTACCTTACCCAGTGACAGCTTTAAAGTGTGATCAGTGCACAGAATTGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR TCA 90 bp | TATTTCATGATCATATGTATTGATGTATATTGCCAGATCCCTGGTTCGATGGGACTACAGAGCCCACGATaGCAGTCTGGCACAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YFMIICIDVYCQIPGSMGLQSPR*QSGTET Trigger: TGTCTCTGTGCCAGACTGTCATCGTGGGCTCTGTAG...TCCCATCGAACCAGGGATCTGGCAATATACATCAATACATATGATCATGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151749.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGGACCATGCTGGTACATaGTCCCACAGAAAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FGFVPSQRTGRINNVFLKDHAGT*SHRKRT Trigger: GGTCCTCTTTCTGTGGGAGCATGTACCAGCATGGTC...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGCACACCCAGTCATGGTaGCGTACCAGCCCAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGFVPSQRTGRINNVFLKHTQSW*RTSPKF Trigger: AAACTTTGGGCTGGTACGGCACCATGACTGGGTGTG...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGGCAGGTGCCAGATTCTaGTTTAATCTCTGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSTFIGHSYTFATSLKLAGARF*FNLCAR Trigger: CCGGGCACAGAGATTAAACCAGAATCTGGCACCTGC...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGCGAAAAAGAAAGCCCTaGAGCTGTAGCTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGFVPSQRTGRINNVFLKRKRKP*SCSCGC Trigger: GCAGCCACAGCTACAGCTCCAGGGCTTTCTTTTTCG...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | AAACTCTCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCTGCTTCTGTCATCTCTaGCAGGTAGAGGTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSLQLCYSMKNPKAGYGCFCHL*QVEVEE Trigger: CTCCTCAACCTCTACCTGGCAGAGATGACAGAAGCA...GCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227009.2 |
||
| 3UTR CAA 72 bp | GGAACCCTTAAGGCATCCAAGATCTTACTCAGGCTGTaGGTAACTTGGATGTATACATACATAACACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTLKASKILLRL*VTWMYTYITLP Trigger: GGGAAGTGTTATGTATGTATACATCCAAGTTACCAACAGCCTGAGTAAGATCTTGGATGCCTTAAGGGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTTGATGCAGATGGTTGTAAAGATGTTGAATACACGTACACGTTCATGGTTTCCGTCTTCTCCCTaGGCCTTATCTGAAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: AVLMQMVVKMLNTRTRSWFPSSP*ALSERL Trigger: TAATCTTTCAGATAAGGCTCAGGGAGAAGACGGAAA...CCATGAACGTGTACGTGTATTCAACATCTTTACAACCATCTGCATCAACACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CCA 90 bp | TACTACTGTGTGTGTGTTATGTTTGTGTGTCCACATGAACACAAGGGTGCACGTACTGTCATACCGTCTTaGATTGTCGAAAAAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YYCVCVMFVCPHEHKGARTVIPS*IVEKES Trigger: GCTTTCTTTTTCGACAATCCAAGACGGTATGACAGT...ACGTGCACCCTTGTGTTCATGTGGACACACAAACATAACACACACACAGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGTCCCTGAGCCTTATCTaGAAGATTATCCCAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QRSTFIGHSYTFATSLKLSLSLI*KIIPAI Trigger: TATGGCTGGGATAATCTTTCAGATAAGGCTCAGGGA...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGTTTACATATCACCTCTaGCAGGTAGAGGTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRSTFIGHSYTFATSLKLFTYHL*QVEVEE Trigger: CTCCTCAACCTCTACCTGGCAGAGGTGATATGTAAA...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTTGATGCAGATGGTTGTAAAGATGTTGAATACACGTACACGTTCATGGTACCAGCCCAAAGTTTaGGAGTTTGATAAACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVLMQMVVKMLNTRTRSWYQPKV*EFDKLP Trigger: AGGAAGTTTATCAAACTCGCAAACTTTGGGCTGGTA...CCATGAACGTGTACGTGTATTCAACATCTTTACAACCATCTGCATCAACACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR GCA 90 bp | AAACTCTCTCTACAACTTTGCTATAGTATGAAGAATCCAAAAGCTGGCTATGGCACTTGTAGATCCTTCTaGTTCTGTCATCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSLQLCYSMKNPKAGYGTCRSF*FCHLCQ Trigger: CTGGCAGAGATGACAGAAGCAGAAGGATCTACAAGT...GCCATAGCCAGCTTTTGGATTCTTCATACTATAGCAAAGTTGTAGAGAGAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227009.2 |
||
| 3UTR CAA 72 bp | TCCAGACTTTTGTTAGTTGCAATAGATGGTGCAGTGTaGATGCAGATGGTTGTAAAGATGTTGAATACACGT | + |
|
Preference number: 4 (lower is better) Translates to: SRLLLVAIDGAV*MQMVVKMLNTR Trigger: ACGTGTATTCAACATCTTTACAACCATCTGCATCAACACTGCACCATCTATTGCAACTAACAAAAGTCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS CCA 90 bp | GAAGCAGTAGAGCAGCCAGTGCGGGAAGAAGTGCAGGCGAGAGGGTaGCCGCAGCAGGGGCAGAGAGCCGCTGAGGGAGAAGGCGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EAVEQPVREEVQARG*PQQGQRAAEGEGGR Trigger: TCGGCCGCCTTCTCCCTCAGCGGCTCTCTGCCCCTGCTGCGGCCACCCTCTCGCCTGCACTTCTTCCCGCACTGGCTGCTCTACTGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000146150.3 ENSMUST00000147957.2 ENSMUST00000226915.2 ENSMUST00000227009.2 ENSMUST00000227056.2 ENSMUST00000227086.2 |
||
| CDS GCA 90 bp | GCCGCTGAGGGAGAAGGCGGCCGAGAAGAGCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAAGAGGCAGAGGCTCTGGTAACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAEGEGGREERGPER*PRETQEEAEALVTE Trigger: CTCAGTTACCAGAGCCTCTGCCTCTTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACGCTCTTCTCGGCCGCCTTCTCCCTCAGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000146150.3 ENSMUST00000147957.2 ENSMUST00000226915.2 ENSMUST00000227009.2 ENSMUST00000227056.2 ENSMUST00000227086.2 |
||
| CDS TCA 90 bp | CCCCCTCAGGCACCGAGTCCATCAGCGGCTCTGCCAGGTAGAGGTTaGGGAGACAGAGCGTGGAGAACTGTAGGCAGGAGGGGAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPQAPSPSAALPGRG*GDRAWRTVGRRGSS Trigger: ACTGCTTCCCCTCCTGCCTACAGTTCTCCACGCTCTGTCTCCTCAACCTCTACCTGGCAGAGCCGCTGATGGACTCGGTGCCTGAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227056.2 |
||
| CDS TCA 90 bp | AGAGCAAAGGAGCAGTGTCTGTCACAGGTCCATTCAGTGGGGGTGTaGCTGTGTAGGTGCCGCCGCCACACCCAGTCATGGTGCCGTACC | + |
|
Preference number: 5 (lower is better) Translates to: RAKEQCLSQVHSVGV*LCRCRRHTQSWCRT Trigger: GGTACGGCACCATGACTGGGTGTGGCGGCGGCACCTACACAGTCACACCCCCACTGAATGGACCTGTGACAGACACTGCTCCTTTGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS GCA 90 bp | CCGGTCCAGCCTCGACAGAGCTACCGGAGCTGCTACTTCTTACGATaGTTCTCTGTGGTCGCCACCAACGCCTTACGTGGAGGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVQPRQSYRSCYFLR*FSVVATNALRGGLC Trigger: GCAGAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGCTCTGTCGAGGCTGGACCGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226915.2 |
||
| CDS CCA 90 bp | GCACGTGAAGAGCAAAGGAGCAGTGTCTGTCACAGGTCCATTCAGTaGGGGTGTGACTGTGTAGGTGCCGCCGCCACACCCAGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: AREEQRSSVCHRSIQ*GCDCVGAAATPSHG Trigger: ACCATGACTGGGTGTGGCGGCGGCACCTACACAGTCACACCCCCACTGAATGGACCTGTGACAGACACTGCTCCTTTGCTCTTCACGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS GCA 90 bp | GTGCCGCCGCCACACCCAGTCATGGTGCCGTACCAGCCCAAAGTTTaGGAGTTTGATAAACTTCCTTCCCGTGAGTTCCCCAGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPPPHPVMVPYQPKV*EFDKLPSREFPSLG Trigger: GCCAAGACTGGGGAACTCACGGGAAGGAAGTTTATCAAACTCGCAAACTTTGGGCTGGTACGGCACCATGACTGGGTGTGGCGGCGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CAA 90 bp | GCATTGGTTATTGATCGTTCACCCCGTCGGGGAAGCGATCGATCAGAATTTGTGCATCAGCGGCTTAAGTaGAGGGAGAGGGAAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALVIDRSPRRGSDRSEFVHQRLK*RERERQ Trigger: CTGTCTTTCCCTCTCCCTCAACTTAAGCCGCTGATG...CACAAATTCTGATCGATCGCTTCCCCGACGGGGTGAACGATCAATAACCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
||
| CDS-3UTR CAA 90 bp | TTTGGCTTTGTACCATCTCAGAGGACGGGAAGGATTAACAATGTGTTTTTAAAGCTCCGTGGACTAGCATaGCACAGGTCAAGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FGFVPSQRTGRINNVFLKLRGLA*HRSSSL Trigger: CAGTGAACTTGACCTGTGCAATGCTAGTCCACGGAG...CTTTAAAAACACATTGTTAATCCTTCCCGTCCTCTGAGATGGTACAAAGCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS TCA 90 bp | TTACGTATAAGCTATGGTGATTCCTTATATCTAAATTACTGCACGTaGAGAGCAAAGGAGCAGTGTCTGTCACAGGTCCATTCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRISYGDSLYLNYCT*RAKEQCLSQVHSVG Trigger: CCCCACTGAATGGACCTGTGACAGACACTGCTCCTTTGCTCTTCACGTGCAGTAATTTAGATATAAGGAATCACCATAGCTTATACGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CAA 90 bp | TACTACTGTGTGTGTGTTATGTTTGTGTGTCCACATGAACACAAGGGTGCACGTACAGAGACATACCCTTaGATTCGAGGTAGACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: YYCVCVMFVCPHEHKGARTETYP*IRGRHL Trigger: CAAATGTCTACCTCGAATCAAAGGGTATGTCTCTGT...ACGTGCACCCTTGTGTTCATGTGGACACACAAACATAACACACACACAGTAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTTGATGCAGATGGTTGTAAAGATGTTGAATACACGTACACGTTCATGGCCAAAGTTTGCGAGTTaGATAAACTTCCTTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVLMQMVVKMLNTRTRSWPKFAS*INFLPV Trigger: CACGGGAAGGAAGTTTATCAAACTCGCAAACTTTGG...CCATGAACGTGTACGTGTATTCAACATCTTTACAACCATCTGCATCAACACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS-3UTR CAA 90 bp | CAAAGAAGTACATTCATTGGCCACAGCTATACTTTTGCAACCAGTTTGAAACTGAGTAGAATTTTGTGTTaGTCAAGTTCAGTGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: QRSTFIGHSYTFATSLKLSRILC*SSSVAH Trigger: ATGTGCCACTGAACTTGACAAACACAAAATTCTACT...CAGTTTCAAACTGGTTGCAAAAGTATAGCTGTGGCCAATGAATGTACTTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS GCA 72 bp | GGAGAAGGCGGCCGAGAAGAGCGTGGTCCTGAGCGCTaGCCACGCGAGACACAGGAAGAGGCAGAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GEGGREERGPER*PRETQEEAEAL Trigger: CAGAGCCTCTGCCTCTTCCTGTGTCTCGCGTGGGCAGCGCTCAGGACCACGCTCTTCTCGGCCGCCTTCTCC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000146150.3 ENSMUST00000147957.2 ENSMUST00000226915.2 ENSMUST00000227009.2 ENSMUST00000227056.2 ENSMUST00000227086.2 |
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| CDS TCA 72 bp | ACGCGAGACACAGGAAGAGGCAGAGGCTCTGGTAACTaGGCCGCCGCTCGCGGTACAGGAGCAGCCGCCACA | + |
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Preference number: 6 (lower is better) Translates to: TRDTGRGRGSGN*AAARGTGAAAT Trigger: TGTGGCGGCTGCTCCTGTACCGCGAGCGGCGGCTCAGTTACCAGAGCCTCTGCCTCTTCCTGTGTCTCGCGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000146150.3 ENSMUST00000147957.2 ENSMUST00000226915.2 ENSMUST00000227009.2 ENSMUST00000227056.2 ENSMUST00000227086.2 |
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| CDS TCA 72 bp | GAGCAGTGTCTGTCACAGGTCCATTCAGTGGGGGTGTaGCTGTGTAGGTGCCGCCGCCACACCCAGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: EQCLSQVHSVGV*LCRCRRHTQSW Trigger: CCATGACTGGGTGTGGCGGCGGCACCTACACAGTCACACCCCCACTGAATGGACCTGTGACAGACACTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS TCA 72 bp | ACCCCCTCAGGCACCGAGTCCATCAGCGGCTTAAGTTaGGGGAGAGGGAAAGACAGGAGTGTCTCAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TPSGTESISGLS*GRGKDRSVSVS Trigger: GGACACTGAGACACTCCTGTCTTTCCCTCTCCCTCAACTTAAGCCGCTGATGGACTCGGTGCCTGAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| CDS GCA 72 bp | TCTGTGGTCGCCACCAACGCCTTACGTGGAGGTCTCTaGCAGGTAGAGGTTGAGGAGACAGAGCGTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SVVATNALRGGL*QVEVEETERGE Trigger: TTCTCCACGCTCTGTCTCCTCAACCTCTACCTGGCAGAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226915.2 |
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| CDS CCA 72 bp | GCTACCGGAGCTGCTACTTCTTACGATGCTTCTCTGTaGTCGCCACCAACGCCTTACGTGGAGGTCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ATGAATSYDASL*SPPTPYVEVSA Trigger: GGCAGAGACCTCCACGTAAGGCGTTGGTGGCGACCACAGAGAAGCATCGTAAGAAGTAGCAGCTCCGGTAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226915.2 |
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| CDS CAA 72 bp | AACCCCCTCAGGCACCGAGTCCATCAGCGGCTTAAGTaGAGGGAGAGGGAAAGACAGGAGTGTCTCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NPLRHRVHQRLK*RERERQECLSV Trigger: GACACTGAGACACTCCTGTCTTTCCCTCTCCCTCAACTTAAGCCGCTGATGGACTCGGTGCCTGAGGGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227086.2 |
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| CDS CAA 90 bp | CGCCACACCCAGTCATGGTGCCGTACCAGCCCAAAGTTTGCGAGTTaGATAAACTTCCTTCCCGTGAGTTCCCCAGTCTTGGCAAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: RHTQSWCRTSPKFAS*INFLPVSSPVLASR Trigger: ACGACTTGCCAAGACTGGGGAACTCACGGGAAGGAAGTTTATCAAACTCGCAAACTTTGGGCTGGTACGGCACCATGACTGGGTGTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS GCA 72 bp | CCACACCCAGTCATGGTGCCGTACCAGCCCAAAGTTTaGGAGTTTGATAAACTTCCTTCCCGTGAGTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: PHPVMVPYQPKV*EFDKLPSREFP Trigger: GGGGAACTCACGGGAAGGAAGTTTATCAAACTCGCAAACTTTGGGCTGGTACGGCACCATGACTGGGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS CAA 72 bp | CAGTCATGGTGCCGTACCAGCCCAAAGTTTGCGAGTTaGATAAACTTCCTTCCCGTGAGTTCCCCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: QSWCRTSPKFAS*INFLPVSSPVL Trigger: CAAGACTGGGGAACTCACGGGAAGGAAGTTTATCAAACTCGCAAACTTTGGGCTGGTACGGCACCATGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS CAA 72 bp | AGTTTGATAAACTTCCTTCCCGTGAGTTCCCCAGTCTaGGCAAGTCGTCGTCACTGTCATACCGTCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLINFLPVSSPV*ASRRHCHTVLD Trigger: ATCCAAGACGGTATGACAGTGACGACGACTTGCCAAGACTGGGGAACTCACGGGAAGGAAGTTTATCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS CAA 90 bp | CAGTCCATTTCAATTGATTTTCTGGGACATCTCCGTGGACTAGCATaGCACAGGTCAAGTTCACTGCTAAGAAGAGGAGGCTTGCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: QSISIDFLGHLRGLA*HRSSSLLRRGGLPV Trigger: TACTGGCAAGCCTCCTCTTCTTAGCAGTGAACTTGACCTGTGCAATGCTAGTCCACGGAGATGTCCCAGAAAATCAATTGAAATGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS CAA 72 bp | TCAATTGATTTTCTGGGACATCTCCGTGGACTAGCATaGCACAGGTCAAGTTCACTGCTAAGAAGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SIDFLGHLRGLA*HRSSSLLRRGG Trigger: GCCTCCTCTTCTTAGCAGTGAACTTGACCTGTGCAATGCTAGTCCACGGAGATGTCCCAGAAAATCAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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| CDS TCA 72 bp | AGCTATGGTGATTCCTTATATCTAAATTACTGCACGTaGAGAGCAAAGGAGCAGTGTCTGTCACAGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SYGDSLYLNYCT*RAKEQCLSQVH Trigger: ATGGACCTGTGACAGACACTGCTCCTTTGCTCTTCACGTGCAGTAATTTAGATATAAGGAATCACCATAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146150.3 |
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