Pregenerated sensors for GPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046856Ensembl transcript IDs: ENSMUST00000050536.14
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAAAGATACATaGTTTAAATTGCAGGGAAGAAATCCTCCCTTTTATAGCCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LSVSERPPEGSQKDT*FKLQGRNPPFYSQA Trigger: TGCTTGGCTATAAAAGGGAGGATTTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| 3UTR TCA 72 bp | TCAGAACGGCCACCAGAGGGCAGCCAGAAAGATACATaGTTTAAATTGCAGGGAAGAAATCCTCCCTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: SERPPEGSQKDT*FKLQGRNPPFY Trigger: ATAAAAGGGAGGATTTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR GCA 90 bp | GTGGAAGAAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAGGGGGATTCCACCCTaGAGCACATTCTGGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: VEETFRLSVSERPPEGSQRGIPP*STFWKE Trigger: CTCTTTCCAGAATGTGCTGCAGGGTGGAATCCCCCT...CTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTTCTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CCA 90 bp | AAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAAAGATACTGTACCAGAGCAGCTaGCTTCCCACAGCGAACGCT | + |
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Preference number: 4 (lower is better) Translates to: KLLGCQYQNGHQRAARKILYQSS*LPTANA Trigger: AGCGTTCGCTGTGGGAAGCCAGCTGCTCTGGTACAG...TATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CCA 90 bp | GAAGAAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAAAGACGATGGCATTTCCTaGGATGCCCAGAACAAATGC | + |
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Preference number: 4 (lower is better) Translates to: EETFRLSVSERPPEGSQKDDGIS*DAQNKC Trigger: GCATTTGTTCTGGGCATCCCAGGAAATGCCATCGTC...TTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR TCA 90 bp | AAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAAAGATAGGAAGAGAACAAAGATaGAGTCTGCGATGGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLLGCQYQNGHQRAARKIGREQR*SLRWPD Trigger: ATCTGGCCATCGCAGACTTCATCTTTGTTCTCTTCC...TATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR GCA 90 bp | CAGACGCAGGCTAAAATAGTGGAAGAAACTTTTAGGCTGTCAGTATCAGAACGGTGGCATTTCCTGGGATaGCCAGAACAAATGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: QTQAKIVEETFRLSVSERWHFLG*PEQMLG Trigger: CCCTAGCATTTGTTCTGGGCATCCCAGGAAATGCCA...CCGTTCTGATACTGACAGCCTAAAAGTTTCTTCCACTATTTTAGCCTGCGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CCA 90 bp | GTGGAAGAAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGGAAAACATGTTCAGTTaGGCAATGAAGGAATTAACC | + |
|
Preference number: 4 (lower is better) Translates to: VEETFRLSVSERPPEGSQENMFS*AMKELT Trigger: GGTTAATTCCTTCATTGCCCAACTGAACATGTTTTC...CTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTTCTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CCA 90 bp | AACGGCCACCAGAGGGCAGCCAGAAAGATACATGATTTAAATTGCAGGGAAGAAAGTAGCAGGAGCTCATaGTTAGCAAAGGGAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: NGHQRAARKIHDLNCREESSRSS*LAKGRG Trigger: ACCTCTTCCCTTTGCTAACCATGAGCTCCTGCTACT...TTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR GCA 90 bp | AACGGCCACCAGAGGGCAGCCAGAAAGATACATGATTTAAATTGCAGGGAAGAAAACAAAGATGAAGTCTaGGATGGCCAGATTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: NGHQRAARKIHDLNCREENKDEV*DGQIEE Trigger: TTCCTCAATCTGGCCATCGCAGACTTCATCTTTGTT...TTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR GCA 90 bp | GGCCACCAGAGGGCAGCCAGAAAGATACATGATTTAAATTGCAGGGAAGAAATCAGGATCATCCAGAGATaGTTTCTAGATATCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GHQRAARKIHDLNCREEIRIIQR*FLDIRM Trigger: CATCCTGATATCTAGAAAGCATCTCTGGATGATCCT...GATTTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS TCA 90 bp | ATGCCCAGAACAAATGCTAGGGCATATAAGAACAGGGAGATCCAGTaGACGAGTCCCAGGTACACCTTCTCCTCCGGGTCAGACTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: MPRTNARAYKNREIQ*TSPRYTFSSGSDSW Trigger: CCAGGAGTCTGACCCGGAGGAGAAGGTGTACCTGGGACTCGTTCACTGGATCTCCCTGTTCTTATATGCCCTAGCATTTGTTCTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CAA 90 bp | GTGGAAGAAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGTCTGCGATGGCCAGATaGAGGAACCAAAGAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VEETFRLSVSERPPEGSQSAMAR*RNQRVV Trigger: CACCACTCTTTGGTTCCTCAATCTGGCCATCGCAGA...CTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTTCTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CAA 90 bp | GGCCACCAGAGGGCAGCCAGAAAGATACATGATTTAAATTGCAGGGAAGAAATCGGAAGGCTAAGCCAGTaGAGAGGGGGATTCCACCCT | + |
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Preference number: 5 (lower is better) Translates to: GHQRAARKIHDLNCREEIGRLSQ*RGGFHP Trigger: AGGGTGGAATCCCCCTCTCAACTGGCTTAGCCTTCC...GATTTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS TCA 90 bp | ACGTCTTGCTTATTAGGACGTAAAGGATGGGATTCAAGCAGCTATTaGGGAAGGCTAAGCCAGTTGAGAGGGGGATTCCACCCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TSCLLGRKGWDSSSY*GRLSQLRGGFHPAA Trigger: TGCTGCAGGGTGGAATCCCCCTCTCAACTGGCTTAGCCTTCCTCAATAGCTGCTTGAATCCCATCCTTTACGTCCTAATAAGCAAGACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CAA 90 bp | AAACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAAAGATAATGAAGGAATTAACCTaGCAGAGCCACAGGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KLLGCQYQNGHQRAARKIMKELT*QSHRPK Trigger: CTTTGGCCTGTGGCTCTGCAAGGTTAATTCCTTCAT...TATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CAA 90 bp | GGCCACCAGAGGGCAGCCAGAAAGATACATGATTTAAATTGCAGGGAAGAAATCGGATTCAAGCAGCTATaGAGGAAGGCTAAGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: GHQRAARKIHDLNCREEIGFKQL*RKAKPV Trigger: AACTGGCTTAGCCTTCCTCAATAGCTGCTTGAATCC...GATTTCTTCCCTGCAATTTAAATCATGTATCTTTCTGGCTGCCCTCTGGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS-3UTR CAA 90 bp | ACTTTTAGGCTGTCAGTATCAGAACGGCCACCAGAGGGCAGCCAGAAAGATACAGGAAAACATGTTCAGTaGGGCAATGAAGGAATTAAC | + |
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Preference number: 5 (lower is better) Translates to: TFRLSVSERPPEGSQKDTGKHVQ*GNEGIN Trigger: GTTAATTCCTTCATTGCCCAACTGAACATGTTTTCC...TGTATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCTAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS GCA 90 bp | CAGCAAACCAAGAAGGCAATGACCACAGACAGGATCATCCAGAGATaGTTTCTAGATATCAGGATGTTCCGCTTTTTCATCTTGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: QQTKKAMTTDRIIQR*FLDIRMFRFFILKM Trigger: CATCTTCAAGATGAAAAAGCGGAACATCCTGATATCTAGAAAGCATCTCTGGATGATCCTGTCTGTGGTCATTGCCTTCTTGGTTTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS CAA 90 bp | AAAACACTGGAAAACATGTTCAGTTGGGCAATGAAGGAATTAACCTaGCAGAGCCACAGGCCAAAGGGCCAGTGGAAACTCAAGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: KTLENMFSWAMKELT*QSHRPKGQWKLKAT Trigger: CGTGGCCTTGAGTTTCCACTGGCCCTTTGGCCTGTGGCTCTGCAAGGTTAATTCCTTCATTGCCCAACTGAACATGTTTTCCAGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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| CDS TCA 72 bp | TTATTAGGACGTAAAGGATGGGATTCAAGCAGCTATTaGGGAAGGCTAAGCCAGTTGAGAGGGGGATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLGRKGWDSSSY*GRLSQLRGGFH Trigger: GTGGAATCCCCCTCTCAACTGGCTTAGCCTTCCTCAATAGCTGCTTGAATCCCATCCTTTACGTCCTAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050536.14 |
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