Pregenerated sensors for GNE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028479Ensembl transcript IDs: ENSMUST00000030201.14, ENSMUST00000102936.9, ENSMUST00000128439.8, ENSMUST00000133709.8, ENSMUST00000140724.3, ENSMUST00000144985.8, ENSMUST00000172533.8, ENSMUST00000173234.8, ENSMUST00000173274.2, ENSMUST00000173383.2, ENSMUST00000174522.8
Found 421 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | GCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGATaGAGGGTGTCGGAGAGGGGTGTCCTGAGGTCCACGGAGTTCCAT | + |
Preference number: 1 (lower is better) Translates to: AMAAQLPSLSTHTGR*RVSERGVLRSTEFH Trigger: ATGGAACTCCGTGGACCTCAGGACACCCCTCTCCGACACCCTGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | CCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATaGTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTCTGAGACCA | + |
Preference number: 1 (lower is better) Translates to: PGRPSGSCALCSPEP*WLRQAGPGPPSLRP Trigger: TGGTCTCAGACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | CCCGAGTCTCTGTCCGTGTCCGTTCCCGGGAGACCTAGTGGATCCTaGGCGTTGTGTAGTCCAGAACCATGCTGGCTGCGCCAAGCAGGG | + |
Preference number: 1 (lower is better) Translates to: PESLSVSVPGRPSGS*ALCSPEPCWLRQAG Trigger: CCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGGACACGGACAGAGACTCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | AGCAGGGCCGGGTCCACCAAGTCTGAGACCACCACGTCCACATCCTaGACGGAGGACAAGGCTTGCTGGCGGATGACGTCCTTCACGATG | + |
Preference number: 1 (lower is better) Translates to: SRAGSTKSETTTSTS*TEDKACWRMTSFTM Trigger: CATCGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTGCAGGATGTGGACGTGGTGGTCTCAGACTTGGTGGACCCGGCCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | CTTGGCTTCCAGGCAGCTGAGCTGCCTGACATGGGTGCTGGGGACTaGCAGGAGCAGGGCAGGCTCTTAACCACTGAGCTGTCTCAGCAG | + |
Preference number: 1 (lower is better) Translates to: LGFQAAELPDMGAGD*QEQGRLLTTELSQQ Trigger: CTGCTGAGACAGCTCAGTGGTTAAGAGCCTGCCCTGCTCCTGCCAGTCCCCAGCACCCATGTCAGGCAGCTCAGCTGCCTGGAAGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | GGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTaGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTCTGAGACCACCA | + |
Preference number: 1 (lower is better) Translates to: GRPSGSCALCSPEPC*LRQAGPGPPSLRPP Trigger: TGGTGGTCTCAGACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | TCCCTCTGCAAGGCCATTCCAGAGGCGTACGCTTCGATGCACCCATaGCTTCCACAGGAGCAGTCAGGACCGTCCAGGGACACCACGAGA | + |
Preference number: 1 (lower is better) Translates to: SLCKAIPEAYASMHP*LPQEQSGPSRDTTR Trigger: TCTCGTGGTGTCCCTGGACGGTCCTGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCTCTGGAATGGCCTTGCAGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | CCACCACGTCCACATCCTGCACGGAGGACAAGGCTTGCTGGCGGATaGCGTCCTTCACGATGTGGATGTAGTGACTGGCCAGGACTCCAG | + |
Preference number: 1 (lower is better) Translates to: PPRPHPARRTRLAGG*RPSRCGCSDWPGLQ Trigger: CTGGAGTCCTGGCCAGTCACTACATCCACATCGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTGCAGGATGTGGACGTGGTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | GTCCTTTTCCTTGGCCGAACTTCCTCTCTGCCATGGCGGCACAGTTaGCGTCATTGTCCACCCACACGGGGAGATGCAGGGTGTCGGAGA | + |
Preference number: 1 (lower is better) Translates to: VLFLGRTSSLPWRHS*RHCPPTRGDAGCRR Trigger: TCTCCGACACCCTGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | GAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGGTTaGTCACGGGTGTTCCGAAAGCGCCAACCTCTCGCACGCCGCAGC | + |
Preference number: 1 (lower is better) Translates to: EHSPRFLFLSALCPG*SRVFRKRQPLARRS Trigger: GCTGCGGCGTGCGAGAGGTTGGCGCTTTCGGAACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | CGTCACGAAGTTCTCCTGTCCTTTTCCTTGGCCGAACTTCCTCTCTaGCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAG | + |
Preference number: 1 (lower is better) Translates to: RHEVLLSFSLAELPL*HGGTVAVIVHPHGE Trigger: CTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACAGGAGAACTTCGTGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | TCTTTGCTTCCCTCTGCAAGGCCATTCCAGAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGGAGCAGTCAGGACCGTCCAGGGACA | + |
Preference number: 1 (lower is better) Translates to: SLLPSARPFQRRTLR*THGFHRSSQDRPGT Trigger: TGTCCCTGGACGGTCCTGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCTCTGGAATGGCCTTGCAGAGGGAAGCAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | ACCTCTCGCACGCCGCAGCTGCTATTCCCAATCATGCAGCCAGCGTaGGCGACCAGCTGTATGAACTGGTCAAACGGGACGTGCTTGACT | + |
Preference number: 1 (lower is better) Translates to: TSRTPQLLFPIMQPA*ATSCMNWSNGTCLT Trigger: AGTCAAGCACGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCAGCTGCGGCGTGCGAGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | GGGTGTCCTGAGGTCCACGGAGTTCCATTCCTGGATCAGCTTGGTTaGATGCAGCACAACTCCTTCCTGGGGATTCACGCGGCCACCTGT | + |
Preference number: 1 (lower is better) Translates to: GCPEVHGVPFLDQLG*MQHNSFLGIHAATC Trigger: ACAGGTGGCCGCGTGAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | GTCCTGAGGTCCACGGAGTTCCATTCCTGGATCAGCTTGGTTGAATaGAGCACAACTCCTTCCTGGGGATTCACGCGGCCACCTGTGGAG | + |
Preference number: 1 (lower is better) Translates to: VLRSTEFHSWISLVE*STTPSWGFTRPPVE Trigger: CTCCACAGGTGGCCGCGTGAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | CGAAGTTCTCCTGTCCTTTTCCTTGGCCGAACTTCCTCTCTGCCATaGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGATGCA | + |
Preference number: 1 (lower is better) Translates to: RSSPVLFLGRTSSLP*RHSCRHCPPTRGDA Trigger: TGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACAGGAGAACTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | CCTGTCCCCGTGATGAGCGTCACGAAGTTCTCCTGTCCTTTTCCTTaGCCGAACTTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATTG | + |
Preference number: 1 (lower is better) Translates to: PVPVMSVTKFSCPFP*PNFLSAMAAQLPSL Trigger: CAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACAGGAGAACTTCGTGACGCTCATCACGGGGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | ATGCTCTGGGCCTTCACGTTGCCCAGCTTGGCAGCCTGGATGAGATaGAGGGCACCCACAGCTTCGTCTTTTGGTACTGACATCCCTTCC | + |
Preference number: 1 (lower is better) Translates to: MLWAFTLPSLAAWMR*RAPTASSFGTDIPS Trigger: GGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | TCGGTACGTGCTCCTCAGTGGTGCTGTTTGCTGGTGCAGTCTGGGTaGGTCCGTGGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTTG | + |
Preference number: 1 (lower is better) Translates to: SVRAPQWCCLLVQSG*VRGLPYLHSLLLLL Trigger: CAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCACTGAGGAGCACGTACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 90 bp | GTAAGATGCTCTGGGCCTTCACGTTGCCCAGCTTGGCAGCCTGGATaGGATGGAGGGCACCCACAGCTTCGTCTTTTGGTACTGACATCC | + |
Preference number: 1 (lower is better) Translates to: VRCSGPSRCPAWQPG*DGGHPQLRLLVLTS Trigger: GGATGTCAGTACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 90 bp | AGACATCCAGCCCTAGGCACTGAACAGGACTCTTGGGCTGTCCCTTaGAAGACAGCCACTGTTGGACTAGCTGAACCACAGCCTGTGAGC | + |
Preference number: 1 (lower is better) Translates to: RHPALGTEQDSWAVP*KTATVGLAEPQPVS Trigger: GCTCACAGGCTGTGGTTCAGCTAGTCCAACAGTGGCTGTCTTGCAAGGGACAGCCCAAGAGTCCTGTTCAGTGCCTAGGGCTGGATGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | GTGGGCGACCAGCTGTATGAACTGGTCAAACGGGACGTGCTTGACTaGACGGAAATTGGGGTGATGCTCGATGCCCTTCTTCCGCATCAC | + |
Preference number: 1 (lower is better) Translates to: VGDQLYELVKRDVLD*TEIGVMLDALLPHH Trigger: GTGATGCGGAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGCAGTCAAGCACGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR CCA 90 bp | TGCTCCTCAGTGGTGCTGTTTGCTGGTGCAGTCTGGGTGAGTCCGTaGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCG | + |
Preference number: 1 (lower is better) Translates to: CSSVVLFAGAVWVSP*PALFAFTSAAVGLS Trigger: CGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCACTGAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 90 bp | GTTCGTAAGATGCTCTGGGCCTTCACGTTGCCCAGCTTGGCAGCCTaGATGAGATGGAGGGCACCCACAGCTTCGTCTTTTGGTACTGAC | + |
Preference number: 1 (lower is better) Translates to: VRKMLWAFTLPSLAA*MRWRAPTASSFGTD Trigger: GTCAGTACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | AGGGTGTCGGAGAGGGGTGTCCTGAGGTCCACGGAGTTCCATTCCTaGATCAGCTTGGTTGAATGCAGCACAACTCCTTCCTGGGGATTC | + |
Preference number: 1 (lower is better) Translates to: RVSERGVLRSTEFHS*ISLVECSTTPSWGF Trigger: GAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGACACCCCTCTCCGACACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | CAAACTCCTCAAGTAAAGCATCTCTCAGCAGACACAGGGGTGCGGTaGCACATCTGTCCTGTCCCGGGGTGCGGTGACACATCTGTCCAA | + |
Preference number: 1 (lower is better) Translates to: QTPQVKHLSADTGVR*HICPVPGCGDTSVQ Trigger: TTGGACAGATGTGTCACCGCACCCCGGGACAGGACAGATGTGTCACCGCACCCCTGTGTCTGCTGAGAGATGCTTTACTTGAGGAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 90 bp | TCACGCGGCCACCTGTGGAGATGCCTACTCCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGGCAGCTTCCACACACATCTGCAGGA | + |
Preference number: 1 (lower is better) Translates to: SRGHLWRCLLPEFCN*VSQLPRQLPHTSAG Trigger: TCCTGCAGATGTGTGTGGAAGCTGCCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGGAGTAGGCATCTCCACAGGTGGCCGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | GGTGAGTCCGTGGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTTaGCTTGTCGTTGAAGATGTGGTTTCTCAAGCTCCCTGCCCTGGC | + |
Preference number: 1 (lower is better) Translates to: GESVACPICIHFCCC*LVVEDVVSQAPCPG Trigger: GCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | CTCAGTGGTGCTGTTTGCTGGTGCAGTCTGGGTGAGTCCGTGGCCTaGCCTATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCGTTGAA | + |
Preference number: 1 (lower is better) Translates to: LSGAVCWCSLGESVA*PICIHFCCCWLVVE Trigger: TTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | TCCACCAAGAGCAGGTCCTCATCATGGAGTTTCTTTGCTTCCCTCTaGAAGGCCATTCCAGAGGCGTACGCTTCGATGCACCCATGGCTT | + |
Preference number: 1 (lower is better) Translates to: STKSRSSSWSFFASL*KAIPEAYASMHPWL Trigger: AAGCCATGGGTGCATCGAAGCGTACGCCTCTGGAATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCTCTTGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | GGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCGTTaGAGATGTGGTTTCTCAAGCTCCCTGCCCTGGCTTCCTGTTCCT | + |
Preference number: 1 (lower is better) Translates to: GLPYLHSLLLLLACR*RCGFSSSLPWLPVP Trigger: AGGAACAGGAAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 90 bp | ATGAACTGGTCAAACGGGACGTGCTTGACTGCACGGAAATTGGGGTaGTGCTCGATGCCCTTCTTCCGCATCACTCGAACCATCTCCTTG | + |
Preference number: 1 (lower is better) Translates to: MNWSNGTCLTARKLG*CSMPFFRITRTISL Trigger: CAAGGAGATGGTTCGAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGCAGTCAAGCACGTCCCGTTTGACCAGTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR GCA 90 bp | TGCTGCTGTTGGCTTGTCGTTGAAGATGTGGTTTCTCAAGCTCCCTaGCCTGGCTTCCTGTTCCTGTGCCTTCCCTGCCTTTATGAATCC | + |
Preference number: 1 (lower is better) Translates to: CCCWLVVEDVVSQAP*PGFLFLCLPCLYES Trigger: GGATTCATAAAGGCAGGGAAGGCACAGGAACAGGAAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | AGTCTGGGTGAGTCCGTGGCCTGCCCTATTTGCATTCACTTCTGCTaGTGTTGGCTTGTCGTTGAAGATGTGGTTTCTCAAGCTCCCTGC | + |
Preference number: 1 (lower is better) Translates to: SLGESVACPICIHFC*CWLVVEDVVSQAPC Trigger: GCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | TGCAGTCTGGGTGAGTCCGTGGCCTGCCCTATTTGCATTCACTTCTaGTGCTGTTGGCTTGTCGTTGAAGATGTGGTTTCTCAAGCTCCC | + |
Preference number: 1 (lower is better) Translates to: CSLGESVACPICIHF*CCWLVVEDVVSQAP Trigger: GGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | GCTGTTTGCTGGTGCAGTCTGGGTGAGTCCGTGGCCTGCCCTATTTaGATTCACTTCTGCTGCTGTTGGCTTGTCGTTGAAGATGTGGTT | + |
Preference number: 1 (lower is better) Translates to: AVCWCSLGESVACPI*IHFCCCWLVVEDVV Trigger: AACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 90 bp | CTGGCCAGGACTCCAGACAGGATCACCAGGGAAGGATTCATAGTGTaGAGGATGTTCACAACCCCAAGTCCCAAAGCAGTTCCAGCTGTT | + |
Preference number: 1 (lower is better) Translates to: LARTPDRITREGFIV*RMFTTPSPKAVPAV Trigger: AACAGCTGGAACTGCTTTGGGACTTGGGGTTGTGAACATCCTCCACACTATGAATCCTTCCCTGGTGATCCTGTCTGGAGTCCTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | TTCCATTCCTGGATCAGCTTGGTTGAATGCAGCACAACTCCTTCCTaGGGATTCACGCGGCCACCTGTGGAGATGCCTACTCCCAGAATT | + |
Preference number: 1 (lower is better) Translates to: FHSWISLVECSTTPS*GFTRPPVEMPTPRI Trigger: AATTCTGGGAGTAGGCATCTCCACAGGTGGCCGCGTGAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | GTACACGTAAATGTGTATGCTGACATTCTGGGACACAGAGAGCAGTaGAAGGCTTTCTTTCCAGAAGCTCTGAGGCCGGCCTGCCTGCCT | + |
Preference number: 1 (lower is better) Translates to: VHVNVYADILGHREQ*KAFFPEALRPACLP Trigger: AGGCAGGCAGGCCGGCCTCAGAGCTTCTGGAAAGAAAGCCTTTCACTGCTCTCTGTGTCCCAGAATGTCAGCATACACATTTACGTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 90 bp | AGCCTGGATGAGATGGAGGGCACCCACAGCTTCGTCTTTTGGTACTaGCATCCCTTCCACCAAGAGCAGGTCCTCATCATGGAGTTTCTT | + |
Preference number: 1 (lower is better) Translates to: SLDEMEGTHSFVFWY*HPFHQEQVLIMEFL Trigger: AAGAAACTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | CTATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCGTTGAAGATGTaGTTTCTCAAGCTCCCTGCCCTGGCTTCCTGTTCCTGTGCCTTC | + |
Preference number: 1 (lower is better) Translates to: LFAFTSAAVGLSLKM*FLKLPALASCSCAF Trigger: GAAGGCACAGGAACAGGAAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | AAGGATTATAGCATTAGGGAGGCTGAGAACCACTGGTTAAAGGGCTaGATAGAACCAGCCCAAGACCGGCAAGTATGTAGGCGACAGACA | + |
Preference number: 1 (lower is better) Translates to: KDYSIREAENHWLKG*IEPAQDRQVCRRQT Trigger: TGTCTGTCGCCTACATACTTGCCGGTCTTGGGCTGGTTCTATGCAGCCCTTTAACCAGTGGTTCTCAGCCTCCCTAATGCTATAATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 90 bp | CAGTACTCTGGAAGCGGGGGCAGGAGGATTGCTGTAAGTTTAAGATaGACCAAGCGAGATTACAGAGACAAGCGAGATTCTGTCTCGAAA | + |
Preference number: 1 (lower is better) Translates to: QYSGSGGRRIAVSLR*TKRDYRDKRDSVSK Trigger: TTTCGAGACAGAATCTCGCTTGTCTCTGTAATCTCGCTTGGTTCATCTTAAACTTACAGCAATCCTCCTGCCCCCGCTTCCAGAGTACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 90 bp | TGTAGTGCTTGCAATATTTTATCTTGGGTGTCAGCATCCCTGACATaGAGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCC | + |
Preference number: 1 (lower is better) Translates to: CSACNILSWVSASLT*RTFSPVSLPICLVP Trigger: GGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGACACCCAAGATAAAATATTGCAAGCACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 90 bp | GGAGGTGTAGTGCTTGCAATATTTTATCTTGGGTGTCAGCATCCCTaGCATGAAGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTG | + |
Preference number: 1 (lower is better) Translates to: GGVVLAIFYLGCQHP*HEEHSPRFLFLSAL Trigger: CAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGACACCCAAGATAAAATATTGCAAGCACTACACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CCA 90 bp | GGAACTATAGTAAAGGATTATAGCATTAGGGAGGCTGAGAACCACTaGTTAAAGGGCTGCATAGAACCAGCCCAAGACCGGCAAGTATGT | + |
Preference number: 1 (lower is better) Translates to: GTIVKDYSIREAENH*LKGCIEPAQDRQVC Trigger: ACATACTTGCCGGTCTTGGGCTGGTTCTATGCAGCCCTTTAACCAGTGGTTCTCAGCCTCCCTAATGCTATAATCCTTTACTATAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 90 bp | GTGACAGCTTCTGTAAAGTACAAGGAAGAAGGAAGCAATTGCTATTaGCTGGTGGCCCTTGCTTTCCATTCACGGTTATTAAAGCCTGCT | + |
Preference number: 1 (lower is better) Translates to: VTASVKYKEEGSNCY*LVALAFHSRLLKPA Trigger: AGCAGGCTTTAATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCTTCCTTCTTCCTTGTACTTTACAGAAGCTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 90 bp | TTCCCATCCCCATATATCTTTGAGCAAGGGTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAATATTTTATCTTGGGTGTCAGCATCC | + |
Preference number: 1 (lower is better) Translates to: FPSPYIFEQGYCLPN*RCSACNILSWVSAS Trigger: GGATGCTGACACCCAAGATAAAATATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTACCCTTGCTCAAAGATATATGGGGATGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | GGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGAGGCATTGGGTCCCCTaGAGCTTGGCTTCCAGGCAG | + |
Preference number: 2 (lower is better) Translates to: GPSRDTTRWPSSAAQKELRHWVP*SLASRQ Trigger: CTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCT...CAGCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | AGCTGCCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCCAGGCTCTTAACCACTaGGCTGTCTCAGCAGCCCTC | + |
Preference number: 2 (lower is better) Translates to: SCPRQRGIGSPGAWLPGSQALNH*AVSAAL Trigger: GAGGGCTGCTGAGACAGCTCAGTGGTTAAGAGCCTG...GCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGGCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCTGAGCTGCCTGACATaGGTGCTGGGGACTGGCAGG | + |
Preference number: 2 (lower is better) Translates to: AERHWVPWSLASRQLSCLLSCLT*VLGTGR Trigger: CCTGCCAGTCCCCAGCACCCATGTCAGGCAGCTCAG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | CCTTGGCCGAACTTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATaGTCCACCCACACGGGGAGATGCAGGGTGTCGGAGAGGGGTGTC | + |
Preference number: 2 (lower is better) Translates to: PWPNFLSAMAAQLPS*STHTGRCRVSERGV Trigger: GACACCCCTCTCCGACACCCTGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | TCTCTGTCCGTGTCCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTaGTGTAGTCCAGAACCATGCTGGCTGCGCCAAGCAGGGCCGGGT | + |
Preference number: 2 (lower is better) Translates to: SLSVSVPGRPSGSCA*CSPEPCWLRQAGPG Trigger: ACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGGACACGGACAGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCAGGCTCTTAACCACTaGGCTGTCTCAGCAGCCCTC | + |
Preference number: 2 (lower is better) Translates to: AERHWVPWSLASRQLSCLQALNH*AVSAAL Trigger: GAGGGCTGCTGAGACAGCTCAGTGGTTAAGAGCCTG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | CAGGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCCTGGATCAGCTTGGTTaGATGCAGCACAACTCCTTC | + |
Preference number: 2 (lower is better) Translates to: QDRPGTPRDGRAPPRRRSLDQLG*MQHNSF Trigger: GAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAG...GCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | TTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGACGGAGAGGGGTGTCCTaGGGTCCACGGAGTTCCATT | + |
Preference number: 2 (lower is better) Translates to: FLSAMAAQLPSLSTHTGRRRGVS*GPRSSI Trigger: AATGGAACTCCGTGGACCTCAGGACACCCCTCTCCG...TCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | TGTCCTTTTCCTTGGCCGAACTTCCTCTCTGCCATGGCGGCACAGTaGCCGTCATTGTCCACCCACACGGGGAGATGCAGGGTGTCGGAG | + |
Preference number: 2 (lower is better) Translates to: CPFPWPNFLSAMAAQ*PSLSTHTGRCRVSE Trigger: CTCCGACACCCTGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | CATGCAGCCAGCGTGGGCGACCAGCTGTATGAACTGGTCAAACGGGACGTGCTTCGGAGAGGGGTGTCCTaGGGTCCACGGAGTTCCATT | + |
Preference number: 2 (lower is better) Translates to: HAASVGDQLYELVKRDVLRRGVS*GPRSSI Trigger: AATGGAACTCCGTGGACCTCAGGACACCCCTCTCCG...AAGCACGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCACGCTGGCTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | GCCCAGCTTGGCAGCCTGGATGAGATGGAGGGCACCCACAGCTTCGTCTTTTGGAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGG | + |
Preference number: 2 (lower is better) Translates to: AQLGSLDEMEGTHSFVFWRRTLR*THGFHR Trigger: CCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCT...CCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | CCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTGGCTGTGTAGTCCAGAACCATaGTGGCTGCGCCAAGCAGGG | + |
Preference number: 2 (lower is better) Translates to: PGRPSGSCALCSPEPCWLCSPEP*WLRQAG Trigger: CCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACA...CAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | CTGGCGGATGACGTCCTTCACGATGTGGATGTAGTGACTGGCCAGGACTCCAGACTGAGCTGCCTGACATaGGTGCTGGGGACTGGCAGG | + |
Preference number: 2 (lower is better) Translates to: LADDVLHDVDVVTGQDSRLSCLT*VLGTGR Trigger: CCTGCCAGTCCCCAGCACCCATGTCAGGCAGCTCAG...TCTGGAGTCCTGGCCAGTCACTACATCCACATCGTGAAGGACGTCATCCGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | AATCATGCAGCCAGCGTGGGCGACCAGCTGTATGAACTGGTCAAACGGGACGTGCTGAGCTGCCTGACATaGGTGCTGGGGACTGGCAGG | + |
Preference number: 2 (lower is better) Translates to: NHAASVGDQLYELVKRDVLSCLT*VLGTGR Trigger: CCTGCCAGTCCCCAGCACCCATGTCAGGCAGCTCAG...CACGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCACGCTGGCTGCATGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | CCCAAAGCAGTTCCAGCTGTTCGTAAGATGCTCTGGGCCTTCACGTaGCCCAGCTTGGCAGCCTGGATGAGATGGAGGGCACCCACAGCT | + |
Preference number: 2 (lower is better) Translates to: PKAVPAVRKMLWAFT*PSLAAWMRWRAPTA Trigger: AGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAACAGCTGGAACTGCTTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | AGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGGTaGATCACGGGTGTTCCGAAAGCGCCAACCTCTCGCACGCCGCAG | + |
Preference number: 2 (lower is better) Translates to: RTFSPVSLPICLVPR*ITGVPKAPTSRTPQ Trigger: CTGCGGCGTGCGAGAGGTTGGCGCTTTCGGAACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | CCCTGTCCCCGTGATGAGCGTCACGAAGTTCTCCTGTCCTTTTCCTaGGCCGAACTTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATT | + |
Preference number: 2 (lower is better) Translates to: PCPRDERHEVLLSFS*AELPLCHGGTVAVI Trigger: AATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACAGGAGAACTTCGTGACGCTCATCACGGGGACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | GAGAGGGGTGTCCTGAGGTCCACGGAGTTCCATTCCTGGATCAGCTaGGTTGAATGCAGCACAACTCCTTCCTGGGGATTCACGCGGCCA | + |
Preference number: 2 (lower is better) Translates to: ERGVLRSTEFHSWIS*VECSTTPSWGFTRP Trigger: TGGCCGCGTGAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGACACCCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | GCTCCTTTTGGTGCAGGAAGTGTCCCTGGAACCCACAGCAGGGTTTGCAGTGAGTCCAGCCCTAGGCACTaGACAGGACTCTTGGGCTGT | + |
Preference number: 2 (lower is better) Translates to: APFGAGSVPGTHSRVCSESSPRH*TGLLGC Trigger: ACAGCCCAAGAGTCCTGTTCAGTGCCTAGGGCTGGA...CTCACTGCAAACCCTGCTGTGGGTTCCAGGGACACTTCCTGCACCAAAAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 90 bp | GTTCCAGCTGTTCGTAAGATGCTCTGGGCCTTCACGTTGCCCAGCTaGGCAGCCTGGATGAGATGGAGGGCACCCACAGCTTCGTCTTTT | + |
Preference number: 2 (lower is better) Translates to: VPAVRKMLWAFTLPS*AAWMRWRAPTASSF Trigger: AAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAACAGCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGACAGGCTCTTAACCACTaGGCTGTCTCAGCAGCCCTC | + |
Preference number: 2 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRQALNH*AVSAAL Trigger: GAGGGCTGCTGAGACAGCTCAGTGGTTAAGAGCCTG...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | ATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGGTTGATCACGGGTGTAGGCATTGGGTCCCCTaGAGCTTGGCTTCCAGGCAG | + |
Preference number: 2 (lower is better) Translates to: ILPGFSSYLPCAQVDHGCRHWVP*SLASRQ Trigger: CTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCT...ACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | TTCACGCGGCCACCTGTGGAGATGCCTACTCCCAGAATTCTGCAATaGAGTTTCACAGCTTCCGCGGCAGCTTCCACACACATCTGCAGG | + |
Preference number: 2 (lower is better) Translates to: FTRPPVEMPTPRILQ*SFTASAAASTHICR Trigger: CCTGCAGATGTGTGTGGAAGCTGCCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGGAGTAGGCATCTCCACAGGTGGCCGCGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | AGTCCGTGGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTTGGCTaGTCGTTGAAGATGTGGTTTCTCAAGCTCCCTGCCCTGGCTTCC | + |
Preference number: 2 (lower is better) Translates to: SPWPALFAFTSAAVG*SLKMWFLKLPALAS Trigger: GGAAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 90 bp | AAGCCCTTTGACACTCATGGCCCCGATAGGTATGAAGCTGCAGGGTaGGAGTTTGTCCTGCTGAGTTCTCCCTGCCTCTTTCCCACTGTG | + |
Preference number: 2 (lower is better) Translates to: KPFDTHGPDRYEAAG*EFVLLSSPCLFPTV Trigger: CACAGTGGGAAAGAGGCAGGGAGAACTCAGCAGGACAAACTCCAACCCTGCAGCTTCATACCTATCGGGGCCATGAGTGTCAAAGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR TCA 90 bp | CTGGCGGATGACGTCCTTCACGATGTGGATGTAGTGACTGGCCAGGACTCCAGACTGGATCAGCTTGGTTaGATGCAGCACAACTCCTTC | + |
Preference number: 2 (lower is better) Translates to: LADDVLHDVDVVTGQDSRLDQLG*MQHNSF Trigger: GAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAG...TCTGGAGTCCTGGCCAGTCACTACATCCACATCGTGAAGGACGTCATCCGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | GTCAGCATCCCTGACATGAAGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTCCGCGCAGAAGGAGCTaGCGTGGATCAGTTCGTGCT | + |
Preference number: 2 (lower is better) Translates to: VSIPDMKNILPGFSSYLPPRRRS*RGSVRA Trigger: AGCACGAACTGATCCACGGCAGCTCCTTCTGCGCGG...AGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | CAGGATCACCAGGGAAGGATTCATAGTGTGGAGGATGTTCACAACCCCAAGTCCAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGG | + |
Preference number: 2 (lower is better) Translates to: QDHQGRIHSVEDVHNPKSRRTLR*THGFHR Trigger: CCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCT...GGACTTGGGGTTGTGAACATCCTCCACACTATGAATCCTTCCCTGGTGATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | CCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTGGCTGATCATGGAGTTTCTTTaGTTCCCTCTGCAAGGCCAT | + |
Preference number: 2 (lower is better) Translates to: PGRPSGSCALCSPEPCWLIMEFL*FPLQGH Trigger: ATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGAT...CAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | AAGACAGCCACTGTTGGACTAGCTGAACCACAGCCTGTGAGCCATTCTGATAATCCGGCAGAGAGGCATTaGGTCCCCTGGAGCTTGGCT | + |
Preference number: 2 (lower is better) Translates to: KTATVGLAEPQPVSHSDNPAERH*VPWSLA Trigger: AGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG...ATTATCAGAATGGCTCACAGGCTGTGGTTCAGCTAGTCCAACAGTGGCTGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CCA 90 bp | TCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGATGCAATTCCTGGATCAGCTTaGTTGAATGCAGCACAACTC | + |
Preference number: 2 (lower is better) Translates to: SLPWRHSCRHCPPTRGDAIPGSA*LNAAQL Trigger: GAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAAT...TGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | GGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTGGCTGCGCCGAAGGATTCATAGTGTaGAGGATGTTCACAACCCCA | + |
Preference number: 2 (lower is better) Translates to: GDLVDPARCVVQNHAGCAEGFIV*RMFTTP Trigger: TGGGGTTGTGAACATCCTCCACACTATGAATCCTTC...GGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | TGGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCGTaGAAGATGTGGTTTCTCAAGCTCCCTGCCCTGGCTTCCTGTTCC | + |
Preference number: 2 (lower is better) Translates to: WPALFAFTSAAVGLS*KMWFLKLPALASCS Trigger: GGAACAGGAAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR GCA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGTCTTGGGCTGTCCCTTaGAAGACAGCCACTGTTGGA | + |
Preference number: 2 (lower is better) Translates to: SQQQKVTDTLARVGAYSRSWAVP*KTATVG Trigger: TCCAACAGTGGCTGTCTTGCAAGGGACAGCCCAAGA...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR GCA 90 bp | GTGTTCCGAAAGCGCCAACCTCTCGCACGCCGCAGCTGCTATTCCCAATCATGCGAACCATCTCCTTGCTaGCTGCATCGATATTTGGAA | + |
Preference number: 2 (lower is better) Translates to: VFRKRQPLARRSCYSQSCEPSPC*LHRYLE Trigger: TTCCAAATATCGATGCAGGCAGCAAGGAGATGGTTC...GCATGATTGGGAATAGCAGCTGCGGCGTGCGAGAGGTTGGCGCTTTCGGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR-3UTR GCA 90 bp | CCTGACATGAAGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGTGGGGTGATGCTCGATaGCCTTCTTCCGCATCACTC | + |
Preference number: 2 (lower is better) Translates to: PDMKNILPGFSSYLPCAQWGDAR*PSSASL Trigger: GAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCA...CTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR-3UTR CCA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGGCAATTGCTATTGCCTaGTGGCCCTTGCTTTCCATT | + |
Preference number: 2 (lower is better) Translates to: YVCGEGYVHLSAAAPGREAIAIA*WPLLSI Trigger: AATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGC...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CCA 90 bp | CTGGCGGATGACGTCCTTCACGATGTGGATGTAGTGACTGGCCAGGACTCCAGAAGCAGGTCCTCATCATaGAGTTTCTTTGCTTCCCTC | + |
Preference number: 2 (lower is better) Translates to: LADDVLHDVDVVTGQDSRSRSSS*SFFASL Trigger: GAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCT...TCTGGAGTCCTGGCCAGTCACTACATCCACATCGTGAAGGACGTCATCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | AGGATGTTCACAACCCCAAGTCCCAAAGCAGTTCCAGCTGTTCGTAAGATGCTCGAGGACAAGGCTTGCTaGCGGATGACGTCCTTCACG | + |
Preference number: 2 (lower is better) Translates to: RMFTTPSPKAVPAVRKMLEDKAC*RMTSFT Trigger: CGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTC...GAGCATCTTACGAACAGCTGGAACTGCTTTGGGACTTGGGGTTGTGAACATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | CAGGATCACCAGGGAAGGATTCATAGTGTGGAGGATGTTCACAACCCCAAGTCCTGTGGATGTAGTGACTaGCCAGGACTCCAGACAGGA | + |
Preference number: 2 (lower is better) Translates to: QDHQGRIHSVEDVHNPKSCGCSD*PGLQTG Trigger: TCCTGTCTGGAGTCCTGGCCAGTCACTACATCCACA...GGACTTGGGGTTGTGAACATCCTCCACACTATGAATCCTTCCCTGGTGATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CAA 90 bp | TGGCGGTACGTCCATGAGTTTATGGGAGTCAGGAGTGGATGCAGTTaGAATGGGAATGTCTCTGTAGGCTCAGGTATGTCGGTACGTGCT | + |
Preference number: 2 (lower is better) Translates to: WRYVHEFMGVRSGCS*NGNVSVGSGMSVRA Trigger: AGCACGTACCGACATACCTGAGCCTACAGAGACATTCCCATTCAAACTGCATCCACTCCTGACTCCCATAAACTCATGGACGTACCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR TCA 90 bp | CCCACAGCTTCGTCTTTTGGTACTGACATCCCTTCCACCAAGAGCAGGTCCTCATTCGTCTTTTGGTACTaGCATCCCTTCCACCAAGAG | + |
Preference number: 2 (lower is better) Translates to: PTASSFGTDIPSTKSRSSFVFWY*HPFHQE Trigger: CTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAA...TGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | CTTCCTGGGGATTCACGCGGCCACCTGTGGAGATGCCTACTCCCAGAATTCTGCTGGAGGTGTAGTGCTTaGAATATTTTATCTTGGGTG | + |
Preference number: 2 (lower is better) Translates to: LPGDSRGHLWRCLLPEFCWRCSA*NILSWV Trigger: CACCCAAGATAAAATATTGCAAGCACTACACCTCCA...GCAGAATTCTGGGAGTAGGCATCTCCACAGGTGGCCGCGTGAATCCCCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | ACGGAGTTCCATTCCTGGATCAGCTTGGTTGAATGCAGCACAACTCCTTCCTGGAGCAGGTCCTCATCATaGAGTTTCTTTGCTTCCCTC | + |
Preference number: 2 (lower is better) Translates to: TEFHSWISLVECSTTPSWSRSSS*SFFASL Trigger: GAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCT...CCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGTTGATCCACATCTTTTaGGGTGGGAAAATCCACCTT | + |
Preference number: 2 (lower is better) Translates to: SQQQKVTDTLARVGAYSRLIHIF*GGKIHL Trigger: AAGGTGGATTTTCCCACCTCAAAAGATGTGGATCAA...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR GCA 90 bp | TCCTATCTGCCTTGTGCCCAGGTTGATCACGGGTGTTCCGAAAGCGCCAACCTCAACATCTTTATGGAATaGTTAATGTCAGTGGTCACG | + |
Preference number: 2 (lower is better) Translates to: SYLPCAQVDHGCSESANLNIFME*LMSVVT Trigger: CGTGACCACTGACATTAAGCATTCCATAAAGATGTT...GAGGTTGGCGCTTTCGGAACACCCGTGATCAACCTGGGCACAAGGCAGATAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR-3UTR CCA 90 bp | ACCAAGAGCAGGTCCTCATCATGGAGTTTCTTTGCTTCCCTCTGCAAGGCCATTACGGAGTTCCATTCCTaGATCAGCTTGGTTGAATGC | + |
Preference number: 2 (lower is better) Translates to: TKSRSSSWSFFASLCKAITEFHS*ISLVEC Trigger: GCATTCAACCAAGCTGATCCAGGAATGGAACTCCGT...AATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCTCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR GCA 90 bp | AGGATGTTCACAACCCCAAGTCCCAAAGCAGTTCCAGCTGTTCGTAAGATGCTCATCATGGAGTTTCTTTaGTTCCCTCTGCAAGGCCAT | + |
Preference number: 2 (lower is better) Translates to: RMFTTPSPKAVPAVRKMLIMEFL*FPLQGH Trigger: ATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGAT...GAGCATCTTACGAACAGCTGGAACTGCTTTGGGACTTGGGGTTGTGAACATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGGAGGCTGGGTACACCTaGGAGAGATTTTTAATTAAA | + |
Preference number: 2 (lower is better) Translates to: SQQQKVTDTLARVGAYSREAGYT*ERFLIK Trigger: TTTAATTAAAAATCTCTCCCAGGTGTACCCAGCCTC...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CCA 90 bp | AGGATGTTCACAACCCCAAGTCCCAAAGCAGTTCCAGCTGTTCGTAAGATGCTCATTCCTGGATCAGCTTaGTTGAATGCAGCACAACTC | + |
Preference number: 2 (lower is better) Translates to: RMFTTPSPKAVPAVRKMLIPGSA*LNAAQL Trigger: GAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAAT...GAGCATCTTACGAACAGCTGGAACTGCTTTGGGACTTGGGGTTGTGAACATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CCA 90 bp | GTCAGCATCCCTGACATGAAGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAAT | + |
Preference number: 2 (lower is better) Translates to: VSIPDMKNILPGFSSYLPYCLPN*RCSACN Trigger: ATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTA...AGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR TCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGAGACACAGGGGTGCGGTaGCACATCTGTCCTGTCCCG | + |
Preference number: 2 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRDTGVR*HICPVP Trigger: CGGGACAGGACAGATGTGTCACCGCACCCCTGTGTC...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 90 bp | CCTTTCGGTGACAGCTTCTGTAAAGTACAAGGAAGAAGGAAGCAATaGCTATTGCCTGGTGGCCCTTGCTTTCCATTCACGGTTATTAAA | + |
Preference number: 2 (lower is better) Translates to: PFGDSFCKVQGRRKQ*LLPGGPCFPFTVIK Trigger: TTTAATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCTTCCTTCTTCCTTGTACTTTACAGAAGCTGTCACCGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 90 bp | TCCTTGCTGCCTGCATCGATATTTGGAAACAGAACTAGGGTCCTCTaGTTAAACGAGATCAGGGCATCCAGTGTTAGCTCAAACATCTTT | + |
Preference number: 2 (lower is better) Translates to: SLLPASIFGNRTRVL*LNEIRASSVSSNIF Trigger: AAAGATGTTTGAGCTAACACTGGATGCCCTGATCTCGTTTAACAAGAGGACCCTAGTTCTGTTTCCAAATATCGATGCAGGCAGCAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR-3UTR GCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGACAGCAGACACAGGGGTaGGGTGACACATCTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRQQTQG*GDTSVL Trigger: CAGGACAGATGTGTCACCGCACCCCTGTGTCTGCTG...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 90 bp | ACCCTATCAGAGCAGCCTTGGCGAAAGCTCATGGGGAAAGTGGATTaGAAAGGTGTGATACTATTCTTGGTTGTCAACTTGATTACATCT | + |
Preference number: 2 (lower is better) Translates to: TLSEQPWRKLMGKVD*KGVILFLVVNLITS Trigger: AGATGTAATCAAGTTGACAACCAAGAATAGTATCACACCTTTCAAATCCACTTTCCCCATGAGCTTTCGCCAAGGCTGCTCTGATAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR GCA 90 bp | GGGGAAAGTGGATTTGAAAGGTGTGATACTATTCTTGGTTGTCAACTTGATTACTTGCCTGGTGGCCCTTaGTTTCCATTCACGGTTATT | + |
Preference number: 2 (lower is better) Translates to: GESGFERCDTILGCQLDYLPGGP*FPFTVI Trigger: AATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAA...GTAATCAAGTTGACAACCAAGAATAGTATCACACCTTTCAAATCCACTTTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CCA 90 bp | AAGTACAAGGAAGAAGGAAGCAATTGCTATTGCCTGGTGGCCCTTGCTTTCCATAGATTCTGGTATTTCTaGGACCAGATATCAAGTTTG | + |
Preference number: 2 (lower is better) Translates to: KYKEEGSNCYCLVALAFHRFWYF*DQISSL Trigger: CAAACTTGATATCTGGTCCCAGAAATACCAGAATCT...ATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCTTCCTTCTTCCTTGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR GCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGATGCATTCACTTCTGCTaGTGTTGGCTTGTCGTTGAA | + |
Preference number: 2 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRCIHFC*CWLVVE Trigger: TTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCA...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GCACAGTTGCCGTCATTGTCCACCCACACGGGGAGATaGAGGGTGTCGGAGAGGGGTGTCCTGAGGTCCACG | + |
Preference number: 3 (lower is better) Translates to: AQLPSLSTHTGR*RVSERGVLRST Trigger: CGTGGACCTCAGGACACCCCTCTCCGACACCCTGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | TTCCCTCTGCAAGGCCATTCCAGAGGCGTACGCTTCGATGCACCCATGGCTTCCTGGGTCCCCTGGAGCTaGGCTTCCAGGCAGCTGAGC | + |
Preference number: 3 (lower is better) Translates to: FPLQGHSRGVRFDAPMASWVPWS*ASRQLS Trigger: GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCA...GGAAGCCATGGGTGCATCGAAGCGTACGCCTCTGGAATGGCCTTGCAGAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | GTGTTCCGAAAGCGCCAACCTCTCGCACGCCGCAGCTaGTATTCCCAATCATGCAGCCAGCGTGGGCGACCA | + |
Preference number: 3 (lower is better) Translates to: VFRKRQPLARRS*YSQSCSQRGRP Trigger: TGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCAGCTGCGGCGTGCGAGAGGTTGGCGCTTTCGGAACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | GGGTCCACCAAGTCTGAGACCACCACGTCCACATCCTaGACGGAGGACAAGGCTTGCTGGCGGATGACGTCC | + |
Preference number: 3 (lower is better) Translates to: GSTKSETTTSTS*TEDKACWRMTS Trigger: GGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTGCAGGATGTGGACGTGGTGGTCTCAGACTTGGTGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | CCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATaGTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGT | + |
Preference number: 3 (lower is better) Translates to: PSGSCALCSPEP*WLRQAGPGPPS Trigger: ACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | CTGTCCGTGTCCGTTCCCGGGAGACCTAGTGGATCCTaGGCGTTGTGTAGTCCAGAACCATGCTGGCTGCGC | + |
Preference number: 3 (lower is better) Translates to: LSVSVPGRPSGS*ALCSPEPCWLR Trigger: GCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGGACACGGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | AGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTaGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTCTG | + |
Preference number: 3 (lower is better) Translates to: SGSCALCSPEPC*LRQAGPGPPSL Trigger: CAGACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGTGGGTCCCCTGGAGCTaGGCTTCCAGGCAGCTGAGC | + |
Preference number: 3 (lower is better) Translates to: YVCGEGYVHLSAAAPGREWVPWS*ASRQLS Trigger: GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCA...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | GCCCAGCTTGGCAGCCTGGATGAGATGGAGGGCACCCACAGCTTCGTCTTTTGGGCACAGTTGCCGTCATaGTCCACCCACACGGGGAGA | + |
Preference number: 3 (lower is better) Translates to: AQLGSLDEMEGTHSFVFWAQLPS*STHTGR Trigger: TCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGC...CCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | AGAACCATGCTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTCTGAGACCACCTTGCCACCCTCAGGTTaGTCCCGCCAAGATCAACAG | + |
Preference number: 3 (lower is better) Translates to: RTMLAAPSRAGSTKSETTLPPSG*SRQDQQ Trigger: CTGTTGATCTTGGCGGGACAAACCTGAGGGTGGCAA...GGTGGTCTCAGACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | ACACGGGGAGATGCAGGGTGTCGGAGAGGGGTGTCCTaGGGTCCACGGAGTTCCATTCCTGGATCAGCTTGG | + |
Preference number: 3 (lower is better) Translates to: TRGDAGCRRGVS*GPRSSIPGSAW Trigger: CCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGACACCCCTCTCCGACACCCTGCATCTCCCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | CAGGTATGTCGGTACGTGCTCCTCAGTGGTGCTGTTTaGTGGTGCAGTCTGGGTGAGTCCGTGGCCTGCCCT | + |
Preference number: 3 (lower is better) Translates to: QVCRYVLLSGAV*WCSLGESVACP Trigger: AGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCACTGAGGAGCACGTACCGACATACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | CCCTCTGCAAGGCCATTCCAGAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGGAGCAGTCAGGACCGT | + |
Preference number: 3 (lower is better) Translates to: PSARPFQRRTLR*THGFHRSSQDR Trigger: ACGGTCCTGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCTCTGGAATGGCCTTGCAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | CCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTCACGGAGGACAAGGCTaGCTGGCGGATGACGTCCTT | + |
Preference number: 3 (lower is better) Translates to: PFPGDLVDPARCVVQNHAHGGQG*LADDVL Trigger: AAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTG...AGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | ACGCCGCAGCTGCTATTCCCAATCATGCAGCCAGCGTaGGCGACCAGCTGTATGAACTGGTCAAACGGGACG | + |
Preference number: 3 (lower is better) Translates to: TPQLLFPIMQPA*ATSCMNWSNGT Trigger: CGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCAGCTGCGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | CCTGTCCTTTTCCTTGGCCGAACTTCCTCTCTGCCATaGCGGCACAGTTGCCGTCATTGTCCACCCACACGG | + |
Preference number: 3 (lower is better) Translates to: PVLFLGRTSSLP*RHSCRHCPPTR Trigger: CCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | ATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGGTTGATCACGGGTGTTGGGTCCCCTGGAGCTaGGCTTCCAGGCAGCTGAGC | + |
Preference number: 3 (lower is better) Translates to: ILPGFSSYLPCAQVDHGCWVPWS*ASRQLS Trigger: GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCA...ACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCATTCCTGGATCAGCTaGGTTGAATGCAGCACAACT | + |
Preference number: 3 (lower is better) Translates to: AERHWVPWSLASRQLSCLHSWIS*VECSTT Trigger: AGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | GTCCACATCCTGCACGGAGGACAAGGCTTGCTGGCGGATGACGTCCTTCACGATAGTGGATCCTGCGCGTaGTGTAGTCCAGAACCATGC | + |
Preference number: 3 (lower is better) Translates to: VHILHGGQGLLADDVLHDSGSCA*CSPEPC Trigger: GCATGGTTCTGGACTACACAACGCGCAGGATCCACT...ATCGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTGCAGGATGTGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | CAAGTAAAGCATCTCTCAGCAGACACAGGGGTGCGGTaGCACATCTGTCCTGTCCCGGGGTGCGGTGACACA | + |
Preference number: 3 (lower is better) Translates to: QVKHLSADTGVR*HICPVPGCGDT Trigger: TGTGTCACCGCACCCCGGGACAGGACAGATGTGTCACCGCACCCCTGTGTCTGCTGAGAGATGCTTTACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 72 bp | CCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGGTTaGTCACGGGTGTTCCGAAAGCGCCAACCTCTCGCA | + |
Preference number: 3 (lower is better) Translates to: PRFLFLSALCPG*SRVFRKRQPLA Trigger: TGCGAGAGGTTGGCGCTTTCGGAACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | TCTGGGCCTTCACGTTGCCCAGCTTGGCAGCCTGGATaGGATGGAGGGCACCCACAGCTTCGTCTTTTGGTA | + |
Preference number: 3 (lower is better) Translates to: SGPSRCPAWQPG*DGGHPQLRLLV Trigger: TACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | CCACATCCTGCACGGAGGACAAGGCTTGCTGGCGGATaGCGTCCTTCACGATGTGGATGTAGTGACTGGCCA | + |
Preference number: 3 (lower is better) Translates to: PHPARRTRLAGG*RPSRCGCSDWP Trigger: TGGCCAGTCACTACATCCACATCGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTGCAGGATGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | GGTGCAGGAAGTGTCCCTGGAACCCACAGCAGGGTTTaGAGTGAGATGACCCTATCAGAGCAGCCTTGGCGA | + |
Preference number: 3 (lower is better) Translates to: GAGSVPGTHSRV*SEMTLSEQPWR Trigger: TCGCCAAGGCTGCTCTGATAGGGTCATCTCACTGCAAACCCTGCTGTGGGTTCCAGGGACACTTCCTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | CCCCAAGTCCCAAAGCAGTTCCAGCTGTTCGTAAGATaGTCTGGGCCTTCACGTTGCCCAGCTTGGCAGCCT | + |
Preference number: 3 (lower is better) Translates to: PQVPKQFQLFVR*SGPSRCPAWQP Trigger: AGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAACAGCTGGAACTGCTTTGGGACTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | GCCTTCACGTTGCCCAGCTTGGCAGCCTGGATGAGATaGAGGGCACCCACAGCTTCGTCTTTTGGTACTGAC | + |
Preference number: 3 (lower is better) Translates to: AFTLPSLAAWMR*RAPTASSFGTD Trigger: GTCAGTACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | ATGCTCTGGGCCTTCACGTTGCCCAGCTTGGCAGCCTaGATGAGATGGAGGGCACCCACAGCTTCGTCTTTT | + |
Preference number: 3 (lower is better) Translates to: MLWAFTLPSLAA*MRWRAPTASSF Trigger: AAAAGACGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | TCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGATGCACCTGGATCAGCTTGGTaGAATGCAGCACAACTCCTT | + |
Preference number: 3 (lower is better) Translates to: SLPWRHSCRHCPPTRGDAPGSAW*NAAQLL Trigger: AAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGG...TGCATCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | GTGTCCCTGGAACCCACAGCAGGGTTTGCAGTGAGATaGCCCTATCAGAGCAGCCTTGGCGAAAGCTCATGG | + |
Preference number: 3 (lower is better) Translates to: VSLEPTAGFAVR*PYQSSLGESSW Trigger: CCATGAGCTTTCGCCAAGGCTGCTCTGATAGGGTCATCTCACTGCAAACCCTGCTGTGGGTTCCAGGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 72 bp | GCTCCTCAGTGGTGCTGTTTGCTGGTGCAGTCTGGGTaGGTCCGTGGCCTGCCCTATTTGCATTCACTTCTG | + |
Preference number: 3 (lower is better) Translates to: APQWCCLLVQSG*VRGLPYLHSLL Trigger: CAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCACTGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GCCCTAGGCACTGAACAGGACTCTTGGGCTGTCCCTTaGAAGACAGCCACTGTTGGACTAGCTGAACCACAG | + |
Preference number: 3 (lower is better) Translates to: ALGTEQDSWAVP*KTATVGLAEPQ Trigger: CTGTGGTTCAGCTAGTCCAACAGTGGCTGTCTTGCAAGGGACAGCCCAAGAGTCCTGTTCAGTGCCTAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GTTCTCCTGTCCTTTTCCTTGGCCGAACTTCCTCTCTaGCATGGCGGCACAGTTGCCGTCATTGTCCACCCA | + |
Preference number: 3 (lower is better) Translates to: VLLSFSLAELPL*HGGTVAVIVHP Trigger: TGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAAAGGACAGGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | ACGTGCTCCTCAGTGGTGCTGTTTGCTGGTGCAGTCTaGGTGAGTCCGTGGCCTGCCCTATTTGCATTCACT | + |
Preference number: 3 (lower is better) Translates to: TCSSVVLFAGAV*VSPWPALFAFT Trigger: AGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCACTGAGGAGCACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 72 bp | AGTCCCAAAGCAGTTCCAGCTGTTCGTAAGATGCTCTaGGCCTTCACGTTGCCCAGCTTGGCAGCCTGGATG | + |
Preference number: 3 (lower is better) Translates to: SPKAVPAVRKML*AFTLPSLAAWM Trigger: CATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAACAGCTGGAACTGCTTTGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | CCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTCCACAGCTTCGTCTTTaGGTACTGACATCCCTTCCA | + |
Preference number: 3 (lower is better) Translates to: PFPGDLVDPARCVVQNHAPQLRL*VLTSLP Trigger: TGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGG...AGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | AGGAAGTGTCCCTGGAACCCACAGCAGGGTTTGCAGTaGGATGACCCTATCAGAGCAGCCTTGGCGAAAGCT | + |
Preference number: 3 (lower is better) Translates to: RKCPWNPQQGLQ*DDPIRAALAKA Trigger: AGCTTTCGCCAAGGCTGCTCTGATAGGGTCATCTCACTGCAAACCCTGCTGTGGGTTCCAGGGACACTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 72 bp | ACAGAGAGCAGTGAAAGGCTTTCTTTCCAGAAGCTCTaGGGCCGGCCTGCCTGCCTGCAATCTCTGGGAAGA | + |
Preference number: 3 (lower is better) Translates to: TESSERLSFQKL*GRPACLQSLGR Trigger: TCTTCCCAGAGATTGCAGGCAGGCAGGCCGGCCTCAGAGCTTCTGGAAAGAAAGCCTTTCACTGCTCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR TCA 72 bp | TCAAACGGGACGTGCTTGACTGCACGGAAATTGGGGTaGTGCTCGATGCCCTTCTTCCGCATCACTCGAACC | + |
Preference number: 3 (lower is better) Translates to: SNGTCLTARKLG*CSMPFFRITRT Trigger: GGTTCGAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGCAGTCAAGCACGTCCCGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR TCA 72 bp | GAGGTCCACGGAGTTCCATTCCTGGATCAGCTTGGTTaGATGCAGCACAACTCCTTCCTGGGGATTCACGCG | + |
Preference number: 3 (lower is better) Translates to: EVHGVPFLDQLG*MQHNSFLGIHA Trigger: CGCGTGAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | TGGCTTGTCGTTGAAGATGTGGTTTCTCAAGCTCCCTaGCCTGGCTTCCTGTTCCTGTGCCTTCCCTGCCTT | + |
Preference number: 3 (lower is better) Translates to: WLVVEDVVSQAP*PGFLFLCLPCL Trigger: AAGGCAGGGAAGGCACAGGAACAGGAAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GCTGTTTGCTGGTGCAGTCTGGGTGAGTCCGTGGCCTaGCCTATTTGCATTCACTTCTGCTGCTGTTGGCTT | + |
Preference number: 3 (lower is better) Translates to: AVCWCSLGESVA*PICIHFCCCWL Trigger: AAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 72 bp | GTGGTGCTGTTTGCTGGTGCAGTCTGGGTGAGTCCGTaGCCTGCCCTATTTGCATTCACTTCTGCTGCTGTT | + |
Preference number: 3 (lower is better) Translates to: VVLFAGAVWVSP*PALFAFTSAAV Trigger: AACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCAGCAAACAGCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 72 bp | GAGAGGGGTGTCCTGAGGTCCACGGAGTTCCATTCCTaGATCAGCTTGGTTGAATGCAGCACAACTCCTTCC | + |
Preference number: 3 (lower is better) Translates to: ERGVLRSTEFHS*ISLVECSTTPS Trigger: GGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGACACCCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | CATGCAGCCAGCGTGGGCGACCAGCTGTATGAACTGGTCAAACGGGACGTGCTTCATTCCTGGATCAGCTaGGTTGAATGCAGCACAACT | + |
Preference number: 3 (lower is better) Translates to: HAASVGDQLYELVKRDVLHSWIS*VECSTT Trigger: AGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATG...AAGCACGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCACGCTGGCTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | GAGATGGAGGGCACCCACAGCTTCGTCTTTTGGTACTaGCATCCCTTCCACCAAGAGCAGGTCCTCATCATG | + |
Preference number: 3 (lower is better) Translates to: EMEGTHSFVFWY*HPFHQEQVLIM Trigger: CATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGGGTGCCCTCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | TGGTGCAGTCTGGGTGAGTCCGTGGCCTGCCCTATTTaGATTCACTTCTGCTGCTGTTGGCTTGTCGTTGAA | + |
Preference number: 3 (lower is better) Translates to: WCSLGESVACPI*IHFCCCWLVVE Trigger: TTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACCCAGACTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | TTCCACCAAGAGCAGGTCCTCATCATGGAGTTTCTTTaGTTCCCTCTGCAAGGCCATTCCAGAGGCGTACGC | + |
Preference number: 3 (lower is better) Translates to: FHQEQVLIMEFL*FPLQGHSRGVR Trigger: GCGTACGCCTCTGGAATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCTCTTGGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | CACCTGTGGAGATGCCTACTCCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGGCAGCTTCCACACACA | + |
Preference number: 3 (lower is better) Translates to: HLWRCLLPEFCN*VSQLPRQLPHT Trigger: TGTGTGTGGAAGCTGCCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGGAGTAGGCATCTCCACAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | AGCATTAGGGAGGCTGAGAACCACTGGTTAAAGGGCTaGATAGAACCAGCCCAAGACCGGCAAGTATGTAGG | + |
Preference number: 3 (lower is better) Translates to: SIREAENHWLKG*IEPAQDRQVCR Trigger: CCTACATACTTGCCGGTCTTGGGCTGGTTCTATGCAGCCCTTTAACCAGTGGTTCTCAGCCTCCCTAATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | CAGCTGTATGAACTGGTCAAACGGGACGTGCTTGACTaGACGGAAATTGGGGTGATGCTCGATGCCCTTCTT | + |
Preference number: 3 (lower is better) Translates to: QLYELVKRDVLD*TEIGVMLDALL Trigger: AAGAAGGGCATCGAGCATCACCCCAATTTCCGTGCAGTCAAGCACGTCCCGTTTGACCAGTTCATACAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | TGGGCGACCAGCTGTATGAACTGGTCAAACGGGACGTGCTTGACTGCACGGAAAACTCGAACCATCTCCTaGCTGCCTGCATCGATATTT | + |
Preference number: 3 (lower is better) Translates to: WATSCMNWSNGTCLTARKTRTIS*LPASIF Trigger: AAATATCGATGCAGGCAGCAAGGAGATGGTTCGAGT...TTTCCGTGCAGTCAAGCACGTCCCGTTTGACCAGTTCATACAGCTGGTCGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
3UTR-3UTR CAA 90 bp | GATGACGTCCTTCACGATGTGGATGTAGTGACTGGCCAGGACTCCAGACAGGATCATCATGGAGTTTCTTaGCTTCCCTCTGCAAGGCCA | + |
Preference number: 3 (lower is better) Translates to: DDVLHDVDVVTGQDSRQDHHGVS*LPSARP Trigger: TGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATG...ATCCTGTCTGGAGTCCTGGCCAGTCACTACATCCACATCGTGAAGGACGTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | TCCGTGTCCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAAGAAACTTTAAAATCCTaGGAACAGCATTCCCATCCC | + |
Preference number: 3 (lower is better) Translates to: SVSVPGRPSGSCALCSPEETLKS*EQHSHP Trigger: GGGATGGGAATGCTGTTCCAAGGATTTTAAAGTTTC...TTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGGACACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | AATGTGTATGCTGACATTCTGGGACACAGAGAGCAGTaGAAGGCTTTCTTTCCAGAAGCTCTGAGGCCGGCC | + |
Preference number: 3 (lower is better) Translates to: NVYADILGHREQ*KAFFPEALRPA Trigger: GGCCGGCCTCAGAGCTTCTGGAAAGAAAGCCTTTCACTGCTCTCTGTGTCCCAGAATGTCAGCATACACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GGCCCTTGCTTTCCATTCACGGTTATTAAAGCCTGCTaGACGAGTCTGACGTGTACTGAAGACCAGCTGAGA | + |
Preference number: 3 (lower is better) Translates to: GPCFPFTVIKAC*TSLTCTEDQLR Trigger: TCTCAGCTGGTCTTCAGTACACGTCAGACTCGTGCAGCAGGCTTTAATAACCGTGAATGGAAAGCAAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GTTTCTCAAGCTCCCTGCCCTGGCTTCCTGTTCCTGTaGCTTCCCTGCCTTTATGAATCCTCTAGAACTGTA | + |
Preference number: 3 (lower is better) Translates to: VSQAPCPGFLFL*LPCLYESSRTV Trigger: TACAGTTCTAGAGGATTCATAAAGGCAGGGAAGGCACAGGAACAGGAAGCCAGGGCAGGGAGCTTGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | GGTGAGTCCGTGGCCTGCCCTATTTGCATTCACTTCTaGTGCTGTTGGCTTGTCGTTGAAGATGTGGTTTCT | + |
Preference number: 3 (lower is better) Translates to: GESVACPICIHF*CCWLVVEDVVS Trigger: AGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAGGGCAGGCCACGGACTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CAA 90 bp | TCCGTGTCCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAAAAAAATAAGCTTTATTaGTATGTGTGTGGAGAGGGG | + |
Preference number: 3 (lower is better) Translates to: SVSVPGRPSGSCALCSPEKNKLY*YVCGEG Trigger: CCCCTCTCCACACACATACAAATAAAGCTTATTTTT...TTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGGACACGGA 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | GCTCTCTTTGGAAGCAAAATGTATACTCTGCCATTGTaGGTTTACCAGGACGTCGTCGTTGAGAGGTCCCCT | + |
Preference number: 3 (lower is better) Translates to: ALFGSKMYTLPL*VYQDVVVERSP Trigger: AGGGGACCTCTCAACGACGACGTCCTGGTAAACCCACAATGGCAGAGTATACATTTTGCTTCCAAAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 72 bp | GTAAAGGATTATAGCATTAGGGAGGCTGAGAACCACTaGTTAAAGGGCTGCATAGAACCAGCCCAAGACCGG | + |
Preference number: 3 (lower is better) Translates to: VKDYSIREAENH*LKGCIEPAQDR Trigger: CCGGTCTTGGGCTGGTTCTATGCAGCCCTTTAACCAGTGGTTCTCAGCCTCCCTAATGCTATAATCCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CCA 72 bp | ACTCCAGACAGGATCACCAGGGAAGGATTCATAGTGTaGAGGATGTTCACAACCCCAAGTCCCAAAGCAGTT | + |
Preference number: 3 (lower is better) Translates to: TPDRITREGFIV*RMFTTPSPKAV Trigger: AACTGCTTTGGGACTTGGGGTTGTGAACATCCTCCACACTATGAATCCTTCCCTGGTGATCCTGTCTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | TATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCGTTaGAGATGTGGTTTCTCAAGCTCCCTGCCCTGGCTT | + |
Preference number: 3 (lower is better) Translates to: YLHSLLLLLACR*RCGFSSSLPWL Trigger: AAGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CAA 90 bp | CCTGACATGAAGAACATTCTCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGTTGCAATATTTTATCTaGGGTGTCAGCATCCCTGAC | + |
Preference number: 3 (lower is better) Translates to: PDMKNILPGFSSYLPCAQLQYFI*GVSIPD Trigger: GTCAGGGATGCTGACACCCAAGATAAAATATTGCAA...CTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR-3UTR CAA 90 bp | AACTGGAGGTGTAGTGCTTGCAATATTTTATCTTGGGTGTCAGCATCCCTGACACCTGGATCAGCTTGGTaGAATGCAGCACAACTCCTT | + |
Preference number: 3 (lower is better) Translates to: NWRCSACNILSWVSASLTPGSAW*NAAQLL Trigger: AAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGG...TGTCAGGGATGCTGACACCCAAGATAAAATATTGCAAGCACTACACCTCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | TGCAATATTTTATCTTGGGTGTCAGCATCCCTGACATaGAGAACATTCTCCCCGGTTTCTCTTCCTATCTGC | + |
Preference number: 3 (lower is better) Translates to: CNILSWVSASLT*RTFSPVSLPIC Trigger: GCAGATAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGACACCCAAGATAAAATATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | GTGCTTGCAATATTTTATCTTGGGTGTCAGCATCCCTaGCATGAAGAACATTCTCCCCGGTTTCTCTTCCTA | + |
Preference number: 3 (lower is better) Translates to: VLAIFYLGCQHP*HEEHSPRFLFL Trigger: TAGGAAGAGAAACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGACACCCAAGATAAAATATTGCAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR GCA 72 bp | TCTGTAAAGTACAAGGAAGAAGGAAGCAATTGCTATTaGCTGGTGGCCCTTGCTTTCCATTCACGGTTATTA | + |
Preference number: 3 (lower is better) Translates to: SVKYKEEGSNCY*LVALAFHSRLL Trigger: TAATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCTTCCTTCTTCCTTGTACTTTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR GCA 72 bp | TCCCATCCCCATATATCTTTGAGCAAGGGTACTGTTTaGCGAACTGGAGGTGTAGTGCTTGCAATATTTTAT | + |
Preference number: 3 (lower is better) Translates to: SHPHISLSKGTV*RTGGVVLAIFY Trigger: ATAAAATATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTACCCTTGCTCAAAGATATATGGGGATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR CCA 72 bp | CCATATATCTTTGAGCAAGGGTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAATATTTTATCTTGGGTG | + |
Preference number: 3 (lower is better) Translates to: PYIFEQGYCLPN*RCSACNILSWV Trigger: CACCCAAGATAAAATATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTACCCTTGCTCAAAGATATATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
3UTR TCA 72 bp | TCATCCAAGAAAAAGCAGATGTTAAGCTGGGTGTGGTaGTTGATTGTTTATAATCCCAGTACTCTGGAAGCG | + |
Preference number: 3 (lower is better) Translates to: SSKKKQMLSWVW*LIVYNPSTLEA Trigger: CGCTTCCAGAGTACTGGGATTATAAACAATCAATCACCACACCCAGCTTAACATCTGCTTTTTCTTGGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CAA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGAGTGGTAACAGTGCAGTaGTTTGGTTGCAGTGATTAC | + |
Preference number: 3 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRVVTVQ*FGCSDY Trigger: GTAATCACTGCAACCAAACAACTGCACTGTTACCAC...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR-3UTR CAA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGACAGGAGTATGCCTTCTaGAAAAGTTGTGAAATGTAT | + |
Preference number: 3 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRQEYAF*KSCEMY Trigger: ATACATTTCACAACTTTTCAAGAAGGCATACTCCTG...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCCCCAGCTTGGCAGCCTaGATGAGATGGAGGGCACCC | + |
Preference number: 4 (lower is better) Translates to: PPAERHWVPWSLASRQLSPSLAA*MRWRAP Trigger: GGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGG...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCAGTCCAGAACCATGCTaGCTGCGCCAAGCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: PPAERHWVPWSLASRQLSSPEPC*LRQAGP Trigger: CGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACT...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR TCA 90 bp | GGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGCATCAATGGTCCCGCTaGCCTCGCCTCCTTCAATGT | + |
Preference number: 4 (lower is better) Translates to: GPSRDTTRWPSSAAQKELHQWSR*PRLLQC Trigger: ACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATG...CAGCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CCA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCAGCACAACTCCTTCCTaGGGATTCACGCGGCCACCT | + |
Preference number: 4 (lower is better) Translates to: PPAERHWVPWSLASRQLSSTTPS*GFTRPP Trigger: AGGTGGCCGCGTGAATCCCCAGGAAGGAGTTGTGCT...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCGCAGCCTGGATGAGATaGAGGGCACCCACAGCTTCG | + |
Preference number: 4 (lower is better) Translates to: PAERHWVPWSLASRQLSCAAWMR*RAPTAS Trigger: CGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGC...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
3UTR CAA 72 bp | GTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGGCATaGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAG | + |
Preference number: 4 (lower is better) Translates to: VHLSAAAPGREA*GPLELGFQAAE Trigger: CTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGGCAGCTGCACTCAGATGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
CDS-3UTR CCA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCGTTCGTAAGATGCTCTaGGCCTTCACGTTGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: PPAERHWVPWSLASRQLSVRKML*AFTLPS Trigger: GCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAAC...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR TCA 90 bp | CAGGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTCAGCATCCCTGACATaGAGAACATTCTCCCCGGTT | + |
Preference number: 4 (lower is better) Translates to: QDRPGTPRDGRAPPRRRSSASLT*RTFSPV Trigger: AACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGA...GCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | GGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGG | + |
Preference number: 4 (lower is better) Translates to: GPSRDTTRWPSSAAQKELPEFCN*VSQLPR Trigger: CCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGG...CAGCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | AGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACCGGAGAGGGGTGTCCTaGGGTCCACGGAGTTCCATT | + |
Preference number: 4 (lower is better) Translates to: REALGPLELGFQAAELPDRRGVS*GPRSSI Trigger: AATGGAACTCCGTGGACCTCAGGACACCCCTCTCCG...GTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | AGCTGCCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCGATCAGGTGCTGCTCTaGACTTCTAGTGCAGCACAC | + |
Preference number: 4 (lower is better) Translates to: SCPRQRGIGSPGAWLPGSDQVLL*TSSAAH Trigger: GTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGATC...GCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGGCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGATAGGAAGGGCAGCCTaGCAACAGGATGCGGTCGTG | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLIGRAA*QQDAVV Trigger: CACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTAT...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACGGAGGACAAGGCTTaGTGGCGGATGACGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLTEDKA*WRMTSF Trigger: GAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGT...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR TCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCATCAATGGTCCCGCTaGCCTCGCCTCCTTCAATGT | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLHQWSR*PRLLQC Trigger: ACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTCAGCATCCCTGACATaGAGAACATTCTCCCCGGTT | + |
Preference number: 4 (lower is better) Translates to: PPAERHWVPWSLASRQLSSASLT*RTFSPV Trigger: AACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGA...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | AGAACCATGCTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTCTGAGACCACCTGGGGTGATGCTCGATaGCCTTCTTCCGCATCACTC | + |
Preference number: 4 (lower is better) Translates to: RTMLAAPSRAGSTKSETTWGDAR*PSSASL Trigger: GAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCA...GGTGGTCTCAGACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGCAGAACCATGCTGGCTaGGCCAAGCAGGGCCGGGTC | + |
Preference number: 4 (lower is better) Translates to: YVCGEGYVHLSAAAPGREQNHAG*AKQGRV Trigger: GACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTG...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | GAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACATGTAGTCCAGAACCATaGTGGCTGCGCCAAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: ERHWVPWSLASRQLSCLTCSPEP*WLRQAG Trigger: CCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACA...TGTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | CCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTGGCTGTCACGCGGCCACCTGTaGAGATGCCTGAGCTACTCC | + |
Preference number: 4 (lower is better) Translates to: PGRPSGSCALCSPEPCWLSRGHL*RCLSYS Trigger: GGAGTAGCTCAGGCATCTCCACAGGTGGCCGCGTGA...CAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
3UTR CAA 72 bp | GTGTCCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTaGTGTAGTCCAGAACCATGCTGGCTGCGCCAAGCA | + |
Preference number: 4 (lower is better) Translates to: VSVPGRPSGSCA*CSPEPCWLRQA Trigger: TGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
CDS-3UTR TCA 90 bp | CCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTCGGGCTTCAGGCGATTaGGGACGTCCGGTAGCTTCA | + |
Preference number: 4 (lower is better) Translates to: PFPGDLVDPARCVVQNHARASGD*GRPVAS Trigger: TGAAGCTACCGGACGTCCTCAATCGCCTGAAGCCCG...AGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | GAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACAGCACGGAAATTGGGGTaGTGCTCGATGCCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: ERHWVPWSLASRQLSCLTARKLG*CSMPFF Trigger: GAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGC...TGTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCTCAGCATCCCTGACATaGAGAACATTCTCCCCGGTT | + |
Preference number: 4 (lower is better) Translates to: PAERHWVPWSLASRQLSCSASLT*RTFSPV Trigger: AACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGA...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGGGGTGTCAGCATCCCTaGCATGAAGAACATTCTCCC | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLGCQHP*HEEHSP Trigger: GGGAGAATGTTCTTCATGTCAGGGATGCTGACACCC...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TTGTGTAGTCCAGAACCATGCTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTATAGGAAGGGCAGCCTaGCAACAGGATGCGGTCGTG | + |
Preference number: 4 (lower is better) Translates to: LCSPEPCWLRQAGPGPPSIGRAA*QQDAVV Trigger: CACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTAT...ACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGACAGAACCATGCTGGCTaGGCCAAGCAGGGCCGGGTC | + |
Preference number: 4 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRQNHAG*AKQGRV Trigger: GACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTG...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | AGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACGCTTCGATGCACCCATaGCTTCCACAGGAGCAGTCA | + |
Preference number: 4 (lower is better) Translates to: REALGPLELGFQAAELPDASMHP*LPQEQS Trigger: TGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAGC...GTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCCCAGCTTGGCAGCCTaGATGAGATGGAGGGCACCC | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSPSLAA*MRWRAP Trigger: GGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGG...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGTGTGGATGTAGTGACTaGCCAGGACTCCAGACAGGA | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLCGCSD*PGLQTG Trigger: TCCTGTCTGGAGTCCTGGCCAGTCACTACATCCACA...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCAGTCCAGAACCATGCTaGCTGCGCCAAGCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSSPEPC*LRQAGP Trigger: CGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACT...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | GTTCGTAAGATGCTCTGGGCCTTCACGTTGCCCAGCTaGGCAGCCTGGATGAGATGGAGGGCACCCACAGCT | + |
Preference number: 4 (lower is better) Translates to: VRKMLWAFTLPS*AAWMRWRAPTA Trigger: AGCTGTGGGTGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
CDS-3UTR TCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGCTTCAGGCGATTaGGGACGTCCGGTAGCTTCA | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSRASGD*GRPVAS Trigger: TGAAGCTACCGGACGTCCTCAATCGCCTGAAGCCCG...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | CTTCGATGCACCCATGGCTTCCACAGGAGCAGTCAGGACCGTCCAGGGACACCAGCACGGAAATTGGGGTaGTGCTCGATGCCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: LRCTHGFHRSSQDRPGTPARKLG*CSMPFF Trigger: GAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGC...TGGTGTCCCTGGACGGTCCTGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGAGCACGGAAATTGGGGTaGTGCTCGATGCCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGARKLG*CSMPFF Trigger: GAAGAAGGGCATCGAGCATCACCCCAATTTCCGTGC...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | AGCTGCCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCATCCCCATATATCTTTaGGCAAGGGTACTGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: SCPRQRGIGSPGAWLPGSIPIYL*ARVLFA Trigger: GGCAAACAGTACCCTTGCTCAAAGATATATGGGGAT...GCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGATGGGGTGATGCTCGATaGCCTTCTTCCGCATCACTC | + |
Preference number: 4 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGWGDAR*PSSASL Trigger: GAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCA...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCGTTTCTCTTCCTATCTaGCTTGTGCCCAGGTTGATC | + |
Preference number: 4 (lower is better) Translates to: PAERHWVPWSLASRQLSCVSLPI*LVPRLI Trigger: GATCAACCTGGGCACAAGGCAGATAGGAAGAGAAAC...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | AGCTGCCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCATCATGGAGTTTCTTTaGTTCCCTCTGCAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: SCPRQRGIGSPGAWLPGSIMEFL*FPLQGH Trigger: ATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGAT...GCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCTCTGGGCCTTCACGTTaGCCAGCTTGGCAGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSSGPSR*PAWQPG Trigger: TCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGA...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGGCAGCCTGGATGAGATaGAGGGCACCCACAGCTTCG | + |
Preference number: 4 (lower is better) Translates to: YVCGEGYVHLSAAAPGREAAWMR*RAPTAS Trigger: CGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGC...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCGCAGCCTGGATGAGATaGAGGGCACCCACAGCTTCG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSAAWMR*RAPTAS Trigger: CGAAGCTGTGGGTGCCCTCCATCTCATCCAGGCTGC...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGCGGGCTTCAGGCGATTaGGGACGTCCGGTAGCTTCA | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQRASGD*GRPVAS Trigger: TGAAGCTACCGGACGTCCTCAATCGCCTGAAGCCCG...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | GAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACATCGCCTCCTTCAATGTaGAGGATGCGGATGTTCATC | + |
Preference number: 4 (lower is better) Translates to: ERHWVPWSLASRQLSCLTSPPSM*RMRMFI Trigger: GATGAACATCCGCATCCTTCACATTGAAGGAGGCGA...TGTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | GACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGCCGTGGATCAGTATCCCCATATATCTTTaGGCAAGGGTACTGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: DTTRWPSSAAQKELPWISIPIYL*ARVLFA Trigger: GGCAAACAGTACCCTTGCTCAAAGATATATGGGGAT...ACTGATCCACGGCAGCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | AGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGG | + |
Preference number: 4 (lower is better) Translates to: REALGPLELGFQAAELPDPEFCN*VSQLPR Trigger: CCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGG...GTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCGGAGAGGGGTGTCCTaGGGTCCACGGAGTTCCATT | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRRRGVS*GPRSSI Trigger: AATGGAACTCCGTGGACCTCAGGACACCCCTCTCCG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCGAACCATCTCCTTGCTaGCTGCATCGATATTTGGAA | + |
Preference number: 4 (lower is better) Translates to: PAERHWVPWSLASRQLSCEPSPC*LHRYLE Trigger: TTCCAAATATCGATGCAGGCAGCAAGGAGATGGTTC...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCTCGAACCATCTCCTTaGTGCCTGCATCGATATTTG | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLLEPSP*CLHRYL Trigger: CAAATATCGATGCAGGCAGCAAGGAGATGGTTCGAG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TTCCCTCTGCAAGGCCATTCCAGAGGCGTACGCTTCGATGCACCCATGGCTTCCTGCTATTCCCAATCATaGAGCCAGCGTGGGCGACCA | + |
Preference number: 4 (lower is better) Translates to: FPLQGHSRGVRFDAPMASCYSQS*SQRGRP Trigger: TGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCA...GGAAGCCATGGGTGCATCGAAGCGTACGCCTCTGGAATGGCCTTGCAGAGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGACCGCGCAGAAGGAGCTaGCGTGGATCAGTTCGTGCT | + |
Preference number: 4 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRPRRRS*RGSVRA Trigger: AGCACGAACTGATCCACGGCAGCTCCTTCTGCGCGG...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCCGCGCAGAAGGAGCTaGCGTGGATCAGTTCGTGCT | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRPRRRS*RGSVRA Trigger: AGCACGAACTGATCCACGGCAGCTCCTTCTGCGCGG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSRRTLR*THGFHR Trigger: CCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCT...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCTGGGCCTTCACGTTaGCCAGCTTGGCAGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRSGPSR*PAWQPG Trigger: TCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGA...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCACGGAGGACAAGGCTTaGTGGCGGATGACGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSTEDKA*WRMTSF Trigger: GAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGT...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCAGAACCATGCTGGCTaGGCCAAGCAGGGCCGGGTC | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRQNHAG*AKQGRV Trigger: GACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: PAERHWVPWSLASRQLSCYCLPN*RCSACN Trigger: ATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTA...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CCA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCATTCCTGGATCAGCTTaGTTGAATGCAGCACAACTC | + |
Preference number: 4 (lower is better) Translates to: PAERHWVPWSLASRQLSCIPGSA*LNAAQL Trigger: GAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAAT...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCGAGGACAAGGCTTGCTaGCGGATGACGTCCTTCACG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSEDKAC*RMTSFT Trigger: CGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTC...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | TCCCCGGTTTCTCTTCCTATCTGCCTTGTGCCCAGGTaGATCACGGGTGTTCCGAAAGCGCCAACCTCTCGC | + |
Preference number: 4 (lower is better) Translates to: SPVSLPICLVPR*ITGVPKAPTSR Trigger: GCGAGAGGTTGGCGCTTTCGGAACACCCGTGATCAACCTGGGCACAAGGCAGATAGGAAGAGAAACCGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133709.8 ENSMUST00000174522.8 |
||
3UTR CAA 72 bp | GTTCCAGCTGTTCGTAAGATGCTCTGGGCCTTCACGTaGCCCAGCTTGGCAGCCTGGATGAGATGGAGGGCA | + |
Preference number: 4 (lower is better) Translates to: VPAVRKMLWAFT*PSLAAWMRWRA Trigger: TGCCCTCCATCTCATCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAACAGCTGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172533.8 ENSMUST00000174522.8 |
||
CDS-3UTR GCA 90 bp | AGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACCACATAGAGATCAGGTaGTGCTCTGCACTTCTAGTG | + |
Preference number: 4 (lower is better) Translates to: REALGPLELGFQAAELPDHIEIR*CSALLV Trigger: CACTAGAAGTGCAGAGCAGCACCTGATCTCTATGTG...GTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTATAGGAAGGGCAGCCTaGCAACAGGATGCGGTCGTG | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRIGRAA*QQDAVV Trigger: CACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTAT...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGGAGGTGTAGTGCTTaGAATATTTTATCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: PPAERHWVPWSLASRQLSWRCSA*NILSWV Trigger: CACCCAAGATAAAATATTGCAAGCACTACACCTCCA...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCTCTGGGCCTTCACGTTaGCCAGCTTGGCAGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVSGPSR*PAWQPG Trigger: TCCAGGCTGCCAAGCTGGGCAACGTGAAGGCCCAGA...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGCAGAAGGAGCTGCCGTaGATCAGTTCGTGCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQQKELP*ISSCWW Trigger: CCACCAGCACGAACTGATCCACGGCAGCTCCTTCTG...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCAGAAGGAGCTGCCGTaGATCAGTTCGTGCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRQKELP*ISSCWW Trigger: CCACCAGCACGAACTGATCCACGGCAGCTCCTTCTG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGGAGGACAAGGCTTGCTaGCGGATGACGTCCTTCACG | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQEDKAC*RMTSFT Trigger: CGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTC...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
3UTR CAA 72 bp | CTGTCCCGGGGTGCGGTGACACATCTGTCCAATCCCTaGGCTGGTGGTGGCTACTTAACAGGAGTATGCCTT | + |
Preference number: 4 (lower is better) Translates to: LSRGAVTHLSNP*AGGGYLTGVCL Trigger: AAGGCATACTCCTGTTAAGTAGCCACCACCAGCCAAGGGATTGGACAGATGTGTCACCGCACCCCGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCATCAATGGTCCCGCTaGCCTCGCCTCCTTCAATGT | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRHQWSR*PRLLQC Trigger: ACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | CCAGCCCTAGGCACTGAACAGGACTCTTGGGCTGTCCCTTGCAAGACAGCCACTCTGGATCAGCTTGGTTaGATGCAGCACAACTCCTTC | + |
Preference number: 4 (lower is better) Translates to: PALGTEQDSWAVPCKTATLDQLG*MQHNSF Trigger: GAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAG...AGTGGCTGTCTTGCAAGGGACAGCCCAAGAGTCCTGTTCAGTGCCTAGGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR GCA 90 bp | GAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACACTTCAATGTGAAGGATaGGGATGTTCATCAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: ERHWVPWSLASRQLSCLTLQCEG*GCSSRQ Trigger: CTGCCTTGATGAACATCCGCATCCTTCACATTGAAG...TGTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCTGTAGTCCAGAACCATaGTGGCTGCGCCAAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVCSPEP*WLRQAG Trigger: CCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACA...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAACTTCCTCTCTGCCATaGCGGCACAGTTGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRTSSLP*RHSCRH Trigger: ATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGT...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTGCTTCGATGCACCCATaGCTTCCACAGGAGCAGTCA | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRASMHP*LPQEQS Trigger: TGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAGC...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTGTTCGTAAGATGCTCTaGGCCTTCACGTTGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRVRKML*AFTLPS Trigger: GCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAAC...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCAGTCCAGAACCATGCTaGCTGCGCCAAGCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVSPEPC*LRQAGP Trigger: CGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACT...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | GTCCTAAGTCTTCTGGGTCAGGTGCTATTGCTCCTTTaGGTGCAGGAAGTGTCCCTGGAACCCACAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: VLSLLGQVLLLL*VQEVSLEPTAG Trigger: CCCTGCTGTGGGTTCCAGGGACACTTCCTGCACCAAAAGGAGCAATAGCACCTGACCCAGAAGACTTAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCTCGCCTCCTTCAATGTaGAGGATGCGGATGTTCATC | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSSPPSM*RMRMFI Trigger: GATGAACATCCGCATCCTTCACATTGAAGGAGGCGA...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCATCAATGGTCCCGCTaGCCTCGCCTCCTTCAATGT | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVHQWSR*PRLLQC Trigger: ACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATG...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGGGTGTCAGCATCCCTaGCATGAAGAACATTCTCCC | + |
Preference number: 4 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRGCQHP*HEEHSP Trigger: GGGAGAATGTTCTTCATGTCAGGGATGCTGACACCC...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGGATCAGGTGCTGCTCTaGACTTCTAGTGCAGCACAC | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQDQVLL*TSSAAH Trigger: GTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGATC...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | TTGTGTAGTCCAGAACCATGCTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTGAACCATCTCCTTGCTaGCTGCATCGATATTTGGAA | + |
Preference number: 4 (lower is better) Translates to: LCSPEPCWLRQAGPGPPSEPSPC*LHRYLE Trigger: TTCCAAATATCGATGCAGGCAGCAAGGAGATGGTTC...ACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCTGCTATTCCCAATCATaGAGCCAGCGTGGGCGACCA | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVCYSQS*SQRGRP Trigger: TGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCA...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGGCTTCCACACACATCTaGAGGATTAAACTAATCCTT | + |
Preference number: 4 (lower is better) Translates to: AERHWVPWSLASRQLSCLASTHI*RIKLIL Trigger: AAGGATTAGTTTAATCCTGCAGATGTGTGTGGAAGC...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGG | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRRRTLR*THGFHR Trigger: CCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCT...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTACCACGTCCACATCCTaGACGGAGGACAAGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRTTSTS*TEDKAC Trigger: GCAAGCCTTGTCCTCCGTGCAGGATGTGGACGTGGT...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTGTAGTCCAGAACCATaGTGGCTGCGCCAAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRCSPEP*WLRQAG Trigger: CCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGACCTCTAACAATCGTGTaGAGCCTGGTGTTAATGTCA | + |
Preference number: 4 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGPLTIV*SLVLMS Trigger: TGACATTAACACCAGGCTCCACACGATTGTTAGAGG...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | TTGTGTAGTCCAGAACCATGCTGGCTGCGCCAAGCAGGGCCGGGTCCACCAAGTTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: LCSPEPCWLRQAGPGPPSYCLPN*RCSACN Trigger: ATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTA...ACTTGGTGGACCCGGCCCTGCTTGGCGCAGCCAGCATGGTTCTGGACTACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCGCTTCGATGCACCCATaGCTTCCACAGGAGCAGTCA | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVASMHP*LPQEQS Trigger: TGACTGCTCCTGTGGAAGCCATGGGTGCATCGAAGC...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | GACACTCATGGCCCCGATAGGTATGAAGCTGCAGGGTaGGAGTTTGTCCTGCTGAGTTCTCCCTGCCTCTTT | + |
Preference number: 4 (lower is better) Translates to: DTHGPDRYEAAG*EFVLLSSPCLF Trigger: AAAGAGGCAGGGAGAACTCAGCAGGACAAACTCCAACCCTGCAGCTTCATACCTATCGGGGCCATGAGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 72 bp | GTCCTGAGGTCCACGGAGTTCCATTCCTGGATCAGCTaGGTTGAATGCAGCACAACTCCTTCCTGGGGATTC | + |
Preference number: 4 (lower is better) Translates to: VLRSTEFHSWIS*VECSTTPSWGF Trigger: GAATCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGTGGACCTCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
CDS-3UTR TCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCAGCATCCCTGACATaGAGAACATTCTCCCCGGTT | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRSASLT*RTFSPV Trigger: AACCGGGGAGAATGTTCTTCATGTCAGGGATGCTGA...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCGGGTGTCAGCATCCCTaGCATGAAGAACATTCTCCC | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVGCQHP*HEEHSP Trigger: GGGAGAATGTTCTTCATGTCAGGGATGCTGACACCC...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGCTGGATCAGCTTGGTTaGATGCAGCACAACTCCTTC | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQLDQLG*MQHNSF Trigger: GAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAG...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | GAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACAATGTCAAAGTCATCTTaGTCAATCATGCGGTATGTG | + |
Preference number: 4 (lower is better) Translates to: ERHWVPWSLASRQLSCLTMSKSS*SIMRYV Trigger: CACATACCGCATGATTGAGCAAGATGACTTTGACAT...TGTCAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCGATCAGGTGCTGCTCTaGACTTCTAGTGCAGCACAC | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVDQVLL*TSSAAH Trigger: GTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGATC...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCATAGGAAGGGCAGCCTaGCAACAGGATGCGGTCGTG | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVIGRAA*QQDAVV Trigger: CACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTAT...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCTCGAACCATCTCCTTaGTGCCTGCATCGATATTTG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSLEPSP*CLHRYL Trigger: CAAATATCGATGCAGGCAGCAAGGAGATGGTTCGAG...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTGGGGTGATGCTCGATaGCCTTCTTCCGCATCACTC | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRWGDAR*PSSASL Trigger: GAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTGCTATTCCCAATCATaGAGCCAGCGTGGGCGACCA | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRCYSQS*SQRGRP Trigger: TGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCGTTTCTCTTCCTATCTaGCTTGTGCCCAGGTTGATC | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSVSLPI*LVPRLI Trigger: GATCAACCTGGGCACAAGGCAGATAGGAAGAGAAAC...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACGGAGTTCCATTCCTGGATCAGCTTGGTTGAATGCAGCACAACTCCTTCCTGGGGCCACCTGTGGAGATaGCTGAGCTACTCCCAGAAT | + |
Preference number: 4 (lower is better) Translates to: TEFHSWISLVECSTTPSWGHLWR*LSYSQN Trigger: ATTCTGGGAGTAGCTCAGGCATCTCCACAGGTGGCC...CCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCAGCAGGTCCTCATCATaGAGTTTCTTTGCTTCCCTC | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSSRSSS*SFFASL Trigger: GAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCT...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTTCGTAAGATGCTCTaGGCCTTCACGTTGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRVRKML*AFTLPS Trigger: GCTGGGCAACGTGAAGGCCCAGAGCATCTTACGAAC...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCTCCGTGAACAATCATaGTGTCGGGCTTCAGGCGAT | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRLREQS*CRASGD Trigger: ATCGCCTGAAGCCCGACATCATGATTGTTCACGGAG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGATTCGTCTTTTGGTACTaGCATCCCTTCCACCAAGAG | + |
Preference number: 4 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRFVFWY*HPFHQE Trigger: CTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAA...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | GGCCGAACTTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACAATGTCAAAGTCATCTTaGTCAATCATGCGGTATGTG | + |
Preference number: 4 (lower is better) Translates to: GRTSSLPWRHSCRHCPPTMSKSS*SIMRYV Trigger: CACATACCGCATGATTGAGCAAGATGACTTTGACAT...TGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCTTCAATGTGAAGGATaGGGATGTTCATCAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSLQCEG*GCSSRQ Trigger: CTGCCTTGATGAACATCCGCATCCTTCACATTGAAG...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCACATAGAGATCAGGTaGTGCTCTGCACTTCTAGTG | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRHIEIR*CSALLV Trigger: CACTAGAAGTGCAGAGCAGCACCTGATCTCTATGTG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCTGCTATTCCCAATCATaGAGCCAGCGTGGGCGACCA | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVCYSQS*SQRGRP Trigger: TGGTCGCCCACGCTGGCTGCATGATTGGGAATAGCA...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGATGGAGGTGTAGTGCTTaGAATATTTTATCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGWRCSA*NILSWV Trigger: CACCCAAGATAAAATATTGCAAGCACTACACCTCCA...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | TTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGAGCTTCCACACACATCTaGAGGATTAAACTAATCCTT | + |
Preference number: 4 (lower is better) Translates to: FLSAMAAQLPSLSTHTGRASTHI*RIKLIL Trigger: AAGGATTAGTTTAATCCTGCAGATGTGTGTGGAAGC...TCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGAGCTTCCACACACATCTaGAGGATTAAACTAATCCTT | + |
Preference number: 4 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGASTHI*RIKLIL Trigger: AAGGATTAGTTTAATCCTGCAGATGTGTGTGGAAGC...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | AGGACTAGTAAACTAAGCCTTCCCATGATGCTAGCTAGCATCCCGAGGTCTATGACGGAGGACAAGGCTTaGTGGCGGATGACGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: RTSKLSLPMMLASIPRSMTEDKA*WRMTSF Trigger: GAAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGT...CATAGACCTCGGGATGCTAGCTAGCATCATGGGAAGGCTTAGTTTACTAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCCTCTAACAATCGTGTaGAGCCTGGTGTTAATGTCA | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSPLTIV*SLVLMS Trigger: TGACATTAACACCAGGCTCCACACGATTGTTAGAGG...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: YVCGEGYVHLSAAAPGREYCLPN*RCSACN Trigger: ATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTA...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCTACTGTTTGCCGAACTaGAGGTGTAGTGCTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSYCLPN*RCSACN Trigger: ATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTA...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTACGGAGTTCCATTCCTaGATCAGCTTGGTTGAATGC | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRTEFHS*ISLVEC Trigger: GCATTCAACCAAGCTGATCCAGGAATGGAACTCCGT...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGGAAGGATTCATAGTGTaGAGGATGTTCACAACCCCA | + |
Preference number: 4 (lower is better) Translates to: YVCGEGYVHLSAAAPGREEGFIV*RMFTTP Trigger: TGGGGTTGTGAACATCCTCCACACTATGAATCCTTC...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTGTGGATGTAGTGACTaGCCAGGACTCCAGACAGGA | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRCGCSD*PGLQTG Trigger: TCCTGTCTGGAGTCCTGGCCAGTCACTACATCCACA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | GCTCCTTTTGGTGCAGGAAGTGTCCCTGGAACCCACAGCAGGGTTTGCAGTGAGTCCCGTTCTTCTCCATaGCTTGCTTCTTTTTACTTG | + |
Preference number: 4 (lower is better) Translates to: APFGAGSVPGTHSRVCSESRSSP*LASFYL Trigger: CAAGTAAAAAGAAGCAAGTCATGGAGAAGAACGGGA...CTCACTGCAAACCCTGCTGTGGGTTCCAGGGACACTTCCTGCACCAAAAGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTCGCCTCCTTCAATGTaGAGGATGCGGATGTTCATC | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRSPPSM*RMRMFI Trigger: GATGAACATCCGCATCCTTCACATTGAAGGAGGCGA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGAGTTTTAGGGTTGAACTaGGTGTACTTCTTAACGATT | + |
Preference number: 4 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGVLGLN*VYFLTI Trigger: AATCGTTAAGAAGTACACTCAGTTCAACCCTAAAAC...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR TCA 90 bp | AAGTCTTCTGGGTCAGGTGCTATTGCTCCTTTTGGTGCAGGAAGTGTCCCTGGACCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGG | + |
Preference number: 4 (lower is better) Translates to: KSSGSGAIAPFGAGSVPGPEFCN*VSQLPR Trigger: CCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGG...TCCAGGGACACTTCCTGCACCAAAAGGAGCAATAGCACCTGACCCAGAAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGG | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRPEFCN*VSQLPR Trigger: CCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | CCGTTCCCGGGAGACCTAGTGGATCCTGCGCGTTGTGTAGTCCAGAACCATGCTCATCTTGCTCAATCATaGGGTATGTGTTTCCATAGT | + |
Preference number: 4 (lower is better) Translates to: PFPGDLVDPARCVVQNHAHLAQS*GMCFHS Trigger: ACTATGGAAACACATACCGCATGATTGAGCAAGATG...AGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGGAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCGATCAGGTGCTGCTCTaGACTTCTAGTGCAGCACAC | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVDQVLL*TSSAAH Trigger: GTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGATC...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GTGGATGTAGTGACTGGCCAGGACTCCAGACAGGATCACCAGGGAAGGATTCATCTCGAACCATCTCCTTaGTGCCTGCATCGATATTTG | + |
Preference number: 4 (lower is better) Translates to: VDVVTGQDSRQDHQGRIHLEPSP*CLHRYL Trigger: CAAATATCGATGCAGGCAGCAAGGAGATGGTTCGAG...ATGAATCCTTCCCTGGTGATCCTGTCTGGAGTCCTGGCCAGTCACTACATCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | AAGACAGCCACTGTTGGACTAGCTGAACCACAGCCTGTGAGCCATTCTGATAATTGGGGTGATGCTCGATaGCCTTCTTCCGCATCACTC | + |
Preference number: 4 (lower is better) Translates to: KTATVGLAEPQPVSHSDNWGDAR*PSSASL Trigger: GAGTGATGCGGAAGAAGGGCATCGAGCATCACCCCA...ATTATCAGAATGGCTCACAGGCTGTGGTTCAGCTAGTCCAACAGTGGCTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGACCTCTAACAATCGTGTaGAGCCTGGTGTTAATGTCA | + |
Preference number: 4 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRPLTIV*SLVLMS Trigger: TGACATTAACACCAGGCTCCACACGATTGTTAGAGG...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CCA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGACGGAGTTCCATTCCTaGATCAGCTTGGTTGAATGC | + |
Preference number: 4 (lower is better) Translates to: SQQQKVTDTLARVGAYSRTEFHS*ISLVEC Trigger: GCATTCAACCAAGCTGATCCAGGAATGGAACTCCGT...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCTGTGGATGTAGTGACTaGCCAGGACTCCAGACAGGA | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVCGCSD*PGLQTG Trigger: TCCTGTCTGGAGTCCTGGCCAGTCACTACATCCACA...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | AAGTACAAGGAAGAAGGAAGCAATTGCTATTGCCTGGTGGCCCTTGCTTTCCATGAGGACAAGGCTTGCTaGCGGATGACGTCCTTCACG | + |
Preference number: 4 (lower is better) Translates to: KYKEEGSNCYCLVALAFHEDKAC*RMTSFT Trigger: CGTGAAGGACGTCATCCGCCAGCAAGCCTTGTCCTC...ATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCTTCCTTCTTCCTTGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTTCGTCTTTTGGTACTaGCATCCCTTCCACCAAGAG | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRFVFWY*HPFHQE Trigger: CTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GTGGATGTAGTGACTGGCCAGGACTCCAGACAGGATCACCAGGGAAGGATTCATCTTCAATGTGAAGGATaGGGATGTTCATCAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: VDVVTGQDSRQDHQGRIHLQCEG*GCSSRQ Trigger: CTGCCTTGATGAACATCCGCATCCTTCACATTGAAG...ATGAATCCTTCCCTGGTGATCCTGTCTGGAGTCCTGGCCAGTCACTACATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCGAACCATCTCCTTGCTaGCTGCATCGATATTTGGAA | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVEPSPC*LHRYLE Trigger: TTCCAAATATCGATGCAGGCAGCAAGGAGATGGTTC...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCTGGAGGTGTAGTGCTTaGAATATTTTATCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSWRCSA*NILSWV Trigger: CACCCAAGATAAAATATTGCAAGCACTACACCTCCA...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCATCATGGAGTTTCTTTaGTTCCCTCTGCAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVIMEFL*FPLQGH Trigger: ATGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGAT...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | AGCAATTGCTATTGCCTGGTGGCCCTTGCTTTCCATTCACGGTTATTAAAGCCTACTTCCTCTCTGCCATaGCGGCACAGTTGCCGTCAT | + |
Preference number: 4 (lower is better) Translates to: SNCYCLVALAFHSRLLKPTSSLP*RHSCRH Trigger: ATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGT...AGGCTTTAATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGGAAGGATTCATAGTGTaGAGGATGTTCACAACCCCA | + |
Preference number: 4 (lower is better) Translates to: SQQQKVTDTLARVGAYSREGFIV*RMFTTP Trigger: TGGGGTTGTGAACATCCTCCACACTATGAATCCTTC...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCGAAGGATTCATAGTGTaGAGGATGTTCACAACCCCA | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVEGFIV*RMFTTP Trigger: TGGGGTTGTGAACATCCTCCACACTATGAATCCTTC...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | CTATTTGCATTCACTTCTGCTGCTGTTGGCTTGTCGTaGAAGATGTGGTTTCTCAAGCTCCCTGCCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LFAFTSAAVGLS*KMWFLKLPALA Trigger: AGCCAGGGCAGGGAGCTTGAGAAACCACATCTTCAACGACAAGCCAACAGCAGCAGAAGTGAATGCAAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTATCCCCATATATCTTTaGGCAAGGGTACTGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRIPIYL*ARVLFA Trigger: GGCAAACAGTACCCTTGCTCAAAGATATATGGGGAT...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCATCTTGCTCAATCATaGGGTATGTGTTTCCATAGT | + |
Preference number: 4 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRHLAQS*GMCFHS Trigger: ACTATGGAAACACATACCGCATGATTGAGCAAGATG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGCATCTTGCTCAATCATaGGGTATGTGTTTCCATAGT | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQHLAQS*GMCFHS Trigger: ACTATGGAAACACATACCGCATGATTGAGCAAGATG...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCTTCAATGTGAAGGATaGGGATGTTCATCAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRLQCEG*GCSSRQ Trigger: CTGCCTTGATGAACATCCGCATCCTTCACATTGAAG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGAACCATCTCCTTGCTaGCTGCATCGATATTTGGAA | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVREPSPC*LHRYLE Trigger: TTCCAAATATCGATGCAGGCAGCAAGGAGATGGTTC...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCCTCTAACAATCGTGTaGAGCCTGGTGTTAATGTCA | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRPLTIV*SLVLMS Trigger: TGACATTAACACCAGGCTCCACACGATTGTTAGAGG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCAGCAGGTCCTCATCATaGAGTTTCTTTGCTTCCCTC | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVSRSSS*SFFASL Trigger: GAGGGAAGCAAAGAAACTCCATGATGAGGACCTGCT...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | GTCCATGAGTTTATGGGAGTCAGGAGTGGATGCAGTTaGAATGGGAATGTCTCTGTAGGCTCAGGTATGTCG | + |
Preference number: 4 (lower is better) Translates to: VHEFMGVRSGCS*NGNVSVGSGMS Trigger: CGACATACCTGAGCCTACAGAGACATTCCCATTCAAACTGCATCCACTCCTGACTCCCATAAACTCATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 72 bp | TTCAAATACATGGCTCACAGCGTGGTAACAGTGCAGTaGTTTGGTTGCAGTGATTACAGGGTGACCCACTGG | + |
Preference number: 4 (lower is better) Translates to: FKYMAHSVVTVQ*FGCSDYRVTHW Trigger: CCAGTGGGTCACCCTGTAATCACTGCAACCAAACAACTGCACTGTTACCACGCTGTGAGCCATGTATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | AGCAATTGCTATTGCCTGGTGGCCCTTGCTTTCCATTCACGGTTATTAAAGCCTTCGCCTCCTTCAATGTaGAGGATGCGGATGTTCATC | + |
Preference number: 4 (lower is better) Translates to: SNCYCLVALAFHSRLLKPSPPSM*RMRMFI Trigger: GATGAACATCCGCATCCTTCACATTGAAGGAGGCGA...AGGCTTTAATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGGTTTTAGGGTTGAACTaGGTGTACTTCTTAACGATT | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQVLGLN*VYFLTI Trigger: AATCGTTAAGAAGTACACTCAGTTCAACCCTAAAAC...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR TCA 90 bp | AAGACAGCCACTGTTGGACTAGCTGAACCACAGCCTGTGAGCCATTCTGATAATTTCGTCTTTTGGTACTaGCATCCCTTCCACCAAGAG | + |
Preference number: 4 (lower is better) Translates to: KTATVGLAEPQPVSHSDNFVFWY*HPFHQE Trigger: CTCTTGGTGGAAGGGATGTCAGTACCAAAAGACGAA...ATTATCAGAATGGCTCACAGGCTGTGGTTCAGCTAGTCCAACAGTGGCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR GCA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAACATCTTTATGGAATaGTTAATGTCAGTGGTCACG | + |
Preference number: 4 (lower is better) Translates to: FVCVWRGVCTSECSCPRQNIFME*LMSVVT Trigger: CGTGACCACTGACATTAAGCATTCCATAAAGATGTT...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | AGGACTAGTAAACTAAGCCTTCCCATGATGCTAGCTAGCATCCCGAGGTCTATGGTTTCTCTTCCTATCTaGCTTGTGCCCAGGTTGATC | + |
Preference number: 4 (lower is better) Translates to: RTSKLSLPMMLASIPRSMVSLPI*LVPRLI Trigger: GATCAACCTGGGCACAAGGCAGATAGGAAGAGAAAC...CATAGACCTCGGGATGCTAGCTAGCATCATGGGAAGGCTTAGTTTACTAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCATTCCTGGATCAGCTTaGTTGAATGCAGCACAACTC | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVIPGSA*LNAAQL Trigger: GAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAAT...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR GCA 90 bp | GTGGATGTAGTGACTGGCCAGGACTCCAGACAGGATCACCAGGGAAGGATTCATAACATCTTTATGGAATaGTTAATGTCAGTGGTCACG | + |
Preference number: 4 (lower is better) Translates to: VDVVTGQDSRQDHQGRIHNIFME*LMSVVT Trigger: CGTGACCACTGACATTAAGCATTCCATAAAGATGTT...ATGAATCCTTCCCTGGTGATCCTGTCTGGAGTCCTGGCCAGTCACTACATCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR GCA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCAACATCTTTATGGAATaGTTAATGTCAGTGGTCACG | + |
Preference number: 4 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVNIFME*LMSVVT Trigger: CGTGACCACTGACATTAAGCATTCCATAAAGATGTT...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGTTCTTCTCCATGACTTaGTTCTTTTTACTTGAGAGT | + |
Preference number: 4 (lower is better) Translates to: SQQQKVTDTLARVGAYSRFFSMT*FFLLES Trigger: ACTCTCAAGTAAAAAGAAGCAAGTCATGGAGAAGAA...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR GCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCATCTTGCTCAATCATaGGGTATGTGTTTCCATAGT | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVHLAQS*GMCFHS Trigger: ACTATGGAAACACATACCGCATGATTGAGCAAGATG...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCATGTCAAAGTCATCTTaGTCAATCATGCGGTATGTG | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVMSKSS*SIMRYV Trigger: CACATACCGCATGATTGAGCAAGATGACTTTGACAT...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTAACATCTTTATGGAATaGTTAATGTCAGTGGTCACG | + |
Preference number: 4 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRNIFME*LMSVVT Trigger: CGTGACCACTGACATTAAGCATTCCATAAAGATGTT...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGACCGCGCAGAAGGAGCTaGCGTGGATCAGTTCGTGCT | + |
Preference number: 4 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRPRRRS*RGSVRA Trigger: AGCACGAACTGATCCACGGCAGCTCCTTCTGCGCGG...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCTATAGTCTTTGTTCTTaGCGGAGAGCAGTTTGTCAT | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVYSLCS*RRAVCH Trigger: ATGACAAACTGCTCTCCGCCAAGAACAAAGACTATA...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
3UTR CAA 72 bp | CTTCATGCCCCTATTCCCATGCTTCCACTGCTCTCTTaGGAAGCAAAATGTATACTCTGCCATTGTGGGTTT | + |
Preference number: 4 (lower is better) Translates to: LHAPIPMLPLLS*EAKCILCHCGF Trigger: AAACCCACAATGGCAGAGTATACATTTTGCTTCCAAAGAGAGCAGTGGAAGCATGGGAATAGGGGCATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 72 bp | CCTGCATCGATATTTGGAAACAGAACTAGGGTCCTCTaGTTAAACGAGATCAGGGCATCCAGTGTTAGCTCA | + |
Preference number: 4 (lower is better) Translates to: PASIFGNRTRVL*LNEIRASSVSS Trigger: TGAGCTAACACTGGATGCCCTGATCTCGTTTAACAAGAGGACCCTAGTTCTGTTTCCAAATATCGATGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133709.8 |
||
CDS-3UTR TCA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCGTTTTAGGGTTGAACTaGGTGTACTTCTTAACGATT | + |
Preference number: 4 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVVLGLN*VYFLTI Trigger: AATCGTTAAGAAGTACACTCAGTTCAACCCTAAAAC...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR GCA 90 bp | AAGACAGCCACTGTTGGACTAGCTGAACCACAGCCTGTGAGCCATTCTGATAATATGTCAAAGTCATCTTaGTCAATCATGCGGTATGTG | + |
Preference number: 4 (lower is better) Translates to: KTATVGLAEPQPVSHSDNMSKSS*SIMRYV Trigger: CACATACCGCATGATTGAGCAAGATGACTTTGACAT...ATTATCAGAATGGCTCACAGGCTGTGGTTCAGCTAGTCCAACAGTGGCTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR GCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGAAGGCGTACGCTTCGATaGACCCATGGCTTCCACAGG | + |
Preference number: 4 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRRRTLR*THGFHR Trigger: CCTGTGGAAGCCATGGGTGCATCGAAGCGTACGCCT...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGAAGCACAACTCCTTCCTaGGGATTCACGCGGCCACCT | + |
Preference number: 4 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRSTTPS*GFTRPP Trigger: AGGTGGCCGCGTGAATCCCCAGGAAGGAGTTGTGCT...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 72 bp | TTCCCATCCCCATATATCTTTGAGCAAGGGTACTGTTaGCCGAACTGGAGGTGTAGTGCTTGCAATATTTTA | + |
Preference number: 4 (lower is better) Translates to: FPSPYIFEQGYC*PNWRCSACNIL Trigger: TAAAATATTGCAAGCACTACACCTCCAGTTCGGCAAACAGTACCCTTGCTCAAAGATATATGGGGATGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
CDS-3UTR TCA 90 bp | AGCAATTGCTATTGCCTGGTGGCCCTTGCTTTCCATTCACGGTTATTAAAGCCTGTTTTAGGGTTGAACTaGGTGTACTTCTTAACGATT | + |
Preference number: 4 (lower is better) Translates to: SNCYCLVALAFHSRLLKPVLGLN*VYFLTI Trigger: AATCGTTAAGAAGTACACTCAGTTCAACCCTAAAAC...AGGCTTTAATAACCGTGAATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
3UTR CAA 72 bp | GTACAGTCGGTAGGCAGAACTGAGGACTTTTATATTTaGTCATCCAAGAAAAAGCAGATGTTAAGCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: VQSVGRTEDFYI*SSKKKQMLSWV Trigger: CACCCAGCTTAACATCTGCTTTTTCTTGGATGACAAAATATAAAAGTCCTCAGTTCTGCCTACCGACTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR TCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGAATCCCCATATATCTTTaGGCAAGGGTACTGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRIPIYL*ARVLFA Trigger: GGCAAACAGTACCCTTGCTCAAAGATATATGGGGAT...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR GCA 90 bp | GGGGAAAGTGGATTTGAAAGGTGTGATACTATTCTTGGTTGTCAACTTGATTACGCTTCCACACACATCTaGAGGATTAAACTAATCCTT | + |
Preference number: 4 (lower is better) Translates to: GESGFERCDTILGCQLDYASTHI*RIKLIL Trigger: AAGGATTAGTTTAATCCTGCAGATGTGTGTGGAAGC...GTAATCAAGTTGACAACCAAGAATAGTATCACACCTTTCAAATCCACTTTCCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR GCA 90 bp | AAATTAGATAATGATAAAGCAGGGCCACAAATACAGAGCTCTTTTGGGAAAAGATGGAGGTGTAGTGCTTaGAATATTTTATCTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: KLDNDKAGPQIQSSFGKRWRCSA*NILSWV Trigger: CACCCAAGATAAAATATTGCAAGCACTACACCTCCA...TCTTTTCCCAAAAGAGCTCTGTATTTGTGGCCCTGCTTTATCATTATCTAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CAA 90 bp | CCCCCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCGCACAGTTGCCGTCATaGTCCACCCACACGGGGAGA | + |
Preference number: 5 (lower is better) Translates to: PPAERHWVPWSLASRQLSAQLPS*STHTGR Trigger: TCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGC...GCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGTCGGGCTTCAGGCGATaGAGGACGTCCGGTAGCTTC | + |
Preference number: 5 (lower is better) Translates to: AERHWVPWSLASRQLSCLSGFRR*RTSGSF Trigger: GAAGCTACCGGACGTCCTCAATCGCCTGAAGCCCGA...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCTTGCCACCCTCAGGTTaGTCCCGCCAAGATCAACAG | + |
Preference number: 5 (lower is better) Translates to: PAERHWVPWSLASRQLSCLPPSG*SRQDQQ Trigger: CTGTTGATCTTGGCGGGACAAACCTGAGGGTGGCAA...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | ATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGCCGTGGATCAGTTCGTGCTGGTGTTGCCACCCTCAGGTTaGTCCCGCCAAGATCAACAG | + |
Preference number: 5 (lower is better) Translates to: MAELRRAEGAAVDQFVLVLPPSG*SRQDQQ Trigger: CTGTTGATCTTGGCGGGACAAACCTGAGGGTGGCAA...CACCAGCACGAACTGATCCACGGCAGCTCCTTCTGCGCGGCGGAGCTCGGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGACCCGGAGCTTTCGGTaGTTCCCGTTCTTCTCCATG | + |
Preference number: 5 (lower is better) Translates to: AERHWVPWSLASRQLSCLTRSFR*FPFFSM Trigger: CATGGAGAAGAACGGGAACAACCGAAAGCTCCGGGT...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGACACGGAGGACAAGGCTaGCTGGCGGATGACGTCCTT | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGHGGQG*LADDVL Trigger: AAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTG...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCATCATGGAGTTTCTTaGCTTCCCTCTGCAAGGCCA | + |
Preference number: 5 (lower is better) Translates to: PAERHWVPWSLASRQLSCHHGVS*LPSARP Trigger: TGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATG...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | GGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGTTGCTGCATCGATATTaGGAAACAGAACTAGGGTCC | + |
Preference number: 5 (lower is better) Translates to: GPSRDTTRWPSSAAQKELLLHRY*ETELGS Trigger: GGACCCTAGTTCTGTTTCCAAATATCGATGCAGCAA...CAGCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGATTGCCACCCTCAGGTTaGTCCCGCCAAGATCAACAG | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGLPPSG*SRQDQQ Trigger: CTGTTGATCTTGGCGGGACAAACCTGAGGGTGGCAA...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCCTGGATCAGCTTGGTaGAATGCAGCACAACTCCTT | + |
Preference number: 5 (lower is better) Translates to: AERHWVPWSLASRQLSCLPGSAW*NAAQLL Trigger: AAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGCCACAGCTTCGTCTTTaGGTACTGACATCCCTTCCA | + |
Preference number: 5 (lower is better) Translates to: AERHWVPWSLASRQLSCLPQLRL*VLTSLP Trigger: TGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGG...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGCACGGAGGACAAGGCTaGCTGGCGGATGACGTCCTT | + |
Preference number: 5 (lower is better) Translates to: YVCGEGYVHLSAAAPGREHGGQG*LADDVL Trigger: AAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTG...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGAAGTGGATCCTGCGCGTaGTGTAGTCCAGAACCATGC | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGSGSCA*CSPEPC Trigger: GCATGGTTCTGGACTACACAACGCGCAGGATCCACT...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GGACCGTCCAGGGACACCACGAGATGGCCGAGCTCCGCCGCGCAGAAGGAGCTGAATGTCAAAGTCATCTaGCTCAATCATGCGGTATGT | + |
Preference number: 5 (lower is better) Translates to: GPSRDTTRWPSSAAQKELNVKVI*LNHAVC Trigger: ACATACCGCATGATTGAGCAAGATGACTTTGACATT...CAGCTCCTTCTGCGCGGCGGAGCTCGGCCATCTCGTGGTGTCCCTGGACGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS TCA 90 bp | AAGGCAGCAGACGTAGCCAGAGCAAGGGCGTCAAATCGGTCTCCGTaGACAATCATGATGTCGGGCTTCAGGCGATTGAGGACGTCCGGT | + |
Preference number: 5 (lower is better) Translates to: KAADVARARASNRSP*TIMMSGFRRLRTSG Trigger: ACCGGACGTCCTCAATCGCCTGAAGCCCGACATCATGATTGTTCACGGAGACCGATTTGACGCCCTTGCTCTGGCTACGTCTGCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS-3UTR CAA 90 bp | CCGGCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCGATGTGGTCAATGTCTaGAGAGATGTTCTCCTTTAC | + |
Preference number: 5 (lower is better) Translates to: PAERHWVPWSLASRQLSCDVVNV*RDVLLY Trigger: GTAAAGGAGAACATCTCTCAAGACATTGACCACATC...GCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGACCCAGAATTCTGCAATaGAGTTTCACAGCTTCCGCG | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGPRILQ*SFTASA Trigger: CGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGG...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGACCTGGATCAGCTTGGTaGAATGCAGCACAACTCCTT | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGPGSAW*NAAQLL Trigger: AAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGG...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | TCACAGCAGCAGAAGGTAACTGATACACTGGCACGTGTGGGTGCTTACTCCAGGGCACAGTTGCCGTCATaGTCCACCCACACGGGGAGA | + |
Preference number: 5 (lower is better) Translates to: SQQQKVTDTLARVGAYSRAQLPS*STHTGR Trigger: TCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGC...CCTGGAGTAAGCACCCACACGTGCCAGTGTATCAGTTACCTTCTGCTGCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGACATCATGGAGTTTCTTaGCTTCCCTCTGCAAGGCCA | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGHHGVS*LPSARP Trigger: TGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATG...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGAGTGGATCCTGCGCGTaGTGTAGTCCAGAACCATGC | + |
Preference number: 5 (lower is better) Translates to: YVCGEGYVHLSAAAPGRESGSCA*CSPEPC Trigger: GCATGGTTCTGGACTACACAACGCGCAGGATCCACT...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS TCA 90 bp | CGGCCACCTGTGGAGATGCCTGAGCTACTCCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGGCAGCTTCCACACACATCTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: RPPVEMPELLPEFCN*VSQLPRQLPHTSAG Trigger: TCCTGCAGATGTGTGTGGAAGCTGCCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGGAGTAGCTCAGGCATCTCCACAGGTGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS GCA 90 bp | GTCTTTGTTCTTGGCGGAGAGCAGTTTGTCATAGGAAGGGCAGCCTaGCAACAGGATGCGGTCGTGGTCCTCGCACATAGAGATCAGGTG | + |
Preference number: 5 (lower is better) Translates to: VFVLGGEQFVIGRAA*QQDAVVVLAHRDQV Trigger: CACCTGATCTCTATGTGCGAGGACCACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTATGACAAACTGCTCTCCGCCAAGAACAAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS-3UTR CAA 90 bp | TTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCACCCACACGGGGAGAACTCGAACCATCTCCTaGCTGCCTGCATCGATATTT | + |
Preference number: 5 (lower is better) Translates to: FLSAMAAQLPSLSTHTGRTRTIS*LPASIF Trigger: AAATATCGATGCAGGCAGCAAGGAGATGGTTCGAGT...TCTCCCCGTGTGGGTGGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | GCAGAGAGGCATTGGGTCCCCTGGAGCTTGGCTTCCAGGCAGCTGAGCTGCCTGGAAACTTTAAAATCCTaGGAACAGCATTCCCATCCC | + |
Preference number: 5 (lower is better) Translates to: AERHWVPWSLASRQLSCLETLKS*EQHSHP Trigger: GGGATGGGAATGCTGTTCCAAGGATTTTAAAGTTTC...CAGGCAGCTCAGCTGCCTGGAAGCCAAGCTCCAGGGGACCCAATGCCTCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGACATTCCTGGATCAGCTaGGTTGAATGCAGCACAACT | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGHSWIS*VECSTT Trigger: AGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATG...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCACGGAGGACAAGGCTaGCTGGCGGATGACGTCCTT | + |
Preference number: 5 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRHGGQG*LADDVL Trigger: AAGGACGTCATCCGCCAGCAAGCCTTGTCCTCCGTG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS TCA 90 bp | CTGATAGAGTCATCAATGGTCCCGCTGACCTCGCCTCCTTCAATGTaGAGGATGCGGATGTTCATCAAGGCAGCAGACGTAGCCAGAGCA | + |
Preference number: 5 (lower is better) Translates to: LIESSMVPLTSPPSM*RMRMFIKAADVARA Trigger: TGCTCTGGCTACGTCTGCTGCCTTGATGAACATCCGCATCCTTCACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATGACTCTATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS-3UTR CAA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGACTCGAACCATCTCCTaGCTGCCTGCATCGATATTT | + |
Preference number: 5 (lower is better) Translates to: YVCGEGYVHLSAAAPGRETRTIS*LPASIF Trigger: AAATATCGATGCAGGCAGCAAGGAGATGGTTCGAGT...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | GAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCACTCGAACCATCTCCTaGCTGCCTGCATCGATATTT | + |
Preference number: 5 (lower is better) Translates to: EEHGSTLSSSRVSVRVRSTRTIS*LPASIF Trigger: AAATATCGATGCAGGCAGCAAGGAGATGGTTCGAGT...GGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | TTTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGCCACAGCTTCGTCTTTaGGTACTGACATCCCTTCCA | + |
Preference number: 5 (lower is better) Translates to: FVCVWRGVCTSECSCPRQPQLRL*VLTSLP Trigger: TGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGG...CTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 |
||
CDS-3UTR CAA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTCCACAGCTTCGTCTTTaGGTACTGACATCCCTTCCA | + |
Preference number: 5 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRPQLRL*VLTSLP Trigger: TGGAAGGGATGTCAGTACCAAAAGACGAAGCTGTGG...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTAGTGGATCCTGCGCGTaGTGTAGTCCAGAACCATGC | + |
Preference number: 5 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRSGSCA*CSPEPC Trigger: GCATGGTTCTGGACTACACAACGCGCAGGATCCACT...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS GCA 90 bp | CAGGATGCGGTCGTGGTCCTCGCACATAGAGATCAGGTGCTGCTCTaGACTTCTAGTGCAGCACACATGGTAGTGAGCCAGTTTTGTTAT | + |
Preference number: 5 (lower is better) Translates to: QDAVVVLAHRDQVLL*TSSAAHMVVSQFCY Trigger: ATAACAAAACTGGCTCACTACCATGTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGATCTCTATGTGCGAGGACCACGACCGCATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS-3UTR CAA 90 bp | GCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTTCCCGGGAAATGTCAAAGTCATCTaGCTCAATCATGCGGTATGT | + |
Preference number: 5 (lower is better) Translates to: AWFHSKQLPSLCPCPFPGNVKVI*LNHAVC Trigger: ACATACCGCATGATTGAGCAAGATGACTTTGACATT...TCCCGGGAACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCTTGCCACCCTCAGGTTaGTCCCGCCAAGATCAACAG | + |
Preference number: 5 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVLPPSG*SRQDQQ Trigger: CTGTTGATCTTGGCGGGACAAACCTGAGGGTGGCAA...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCATCATGGAGTTTCTTaGCTTCCCTCTGCAAGGCCA | + |
Preference number: 5 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVHHGVS*LPSARP Trigger: TGGCCTTGCAGAGGGAAGCAAAGAAACTCCATGATG...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCACTCGAACCATCTCCTaGCTGCCTGCATCGATATTT | + |
Preference number: 5 (lower is better) Translates to: DLEEHGSTLSSSRVSVRVTRTIS*LPASIF Trigger: AAATATCGATGCAGGCAGCAAGGAGATGGTTCGAGT...GACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | TTTCCTTGGCCGAACTTCCTCTCTGCCATGGCGGCACAGTTGCCGTCATTGTCCGAAACTTTAAAATCCTaGGAACAGCATTCCCATCCC | + |
Preference number: 5 (lower is better) Translates to: FPWPNFLSAMAAQLPSLSETLKS*EQHSHP Trigger: GGGATGGGAATGCTGTTCCAAGGATTTTAAAGTTTC...GGACAATGACGGCAACTGTGCCGCCATGGCAGAGAGGAAGTTCGGCCAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | TATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGAGAGGATGTGGTCAATGTCTaGAGAGATGTTCTCCTTTAC | + |
Preference number: 5 (lower is better) Translates to: YVCGEGYVHLSAAAPGREDVVNV*RDVLLY Trigger: GTAAAGGAGAACATCTCTCAAGACATTGACCACATC...CTCTCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | GAGTTCCATTCCTGGATCAGCTTGGTTGAATGCAGCACAACTCCTTCCTGGGGACCCAGAATTCTGCAATaGAGTTTCACAGCTTCCGCG | + |
Preference number: 5 (lower is better) Translates to: EFHSWISLVECSTTPSWGPRILQ*SFTASA Trigger: CGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGG...TCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTCCCAGAATTCTGCAATaGAGTTTCACAGCTTCCGCG | + |
Preference number: 5 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRPRILQ*SFTASA Trigger: CGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGG...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS CCA 90 bp | ACCGACTCTACCATGGCCGCTTCATCTTCCCCTCTAACAATCGTGTaGAGCCTGGTGTTAATGTCAAAGTCATCTTGCTCAATCATGCGG | + |
Preference number: 5 (lower is better) Translates to: TDSTMAASSSPLTIV*SLVLMSKSSCSIMR Trigger: CCGCATGATTGAGCAAGATGACTTTGACATTAACACCAGGCTCCACACGATTGTTAGAGGGGAAGATGAAGCGGCCATGGTAGAGTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000128439.8 ENSMUST00000140724.3 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS-3UTR CAA 90 bp | TTGTATGTGTGTGGAGAGGGGTATGTACATCTGAGTGCAGCTGCCCCCGGCAGATTGCAATATTTTATCTaGGGTGTCAGCATCCCTGAC | + |
Preference number: 5 (lower is better) Translates to: LYVCGEGYVHLSAAAPGRLQYFI*GVSIPD Trigger: GTCAGGGATGCTGACACCCAAGATAAAATATTGCAA...TCTGCCGGGGGCAGCTGCACTCAGATGTACATACCCCTCTCCACACACATACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | CTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTGTCCGTGATGTGGTCAATGTCTaGAGAGATGTTCTCCTTTAC | + |
Preference number: 5 (lower is better) Translates to: LEEHGSTLSSSRVSVRVRDVVNV*RDVLLY Trigger: GTAAAGGAGAACATCTCTCAAGACATTGACCACATC...ACGGACACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GTGGATGTAGTGACTGGCCAGGACTCCAGACAGGATCACCAGGGAAGGATTCATTTGCAATATTTTATCTaGGGTGTCAGCATCCCTGAC | + |
Preference number: 5 (lower is better) Translates to: VDVVTGQDSRQDHQGRIHLQYFI*GVSIPD Trigger: GTCAGGGATGCTGACACCCAAGATAAAATATTGCAA...ATGAATCCTTCCCTGGTGATCCTGTCTGGAGTCCTGGCCAGTCACTACATCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | ACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCCGTTTGCAATATTTTATCTaGGGTGTCAGCATCCCTGAC | + |
Preference number: 5 (lower is better) Translates to: TDLEEHGSTLSSSRVSVRLQYFI*GVSIPD Trigger: GTCAGGGATGCTGACACCCAAGATAAAATATTGCAA...ACGGACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | GAGTTCCATTCCTGGATCAGCTTGGTTGAATGCAGCACAACTCCTTCCTGGGGAGATGTGGTCAATGTCTaGAGAGATGTTCTCCTTTAC | + |
Preference number: 5 (lower is better) Translates to: EFHSWISLVECSTTPSWGDVVNV*RDVLLY Trigger: GTAAAGGAGAACATCTCTCAAGACATTGACCACATC...TCCCCAGGAAGGAGTTGTGCTGCATTCAACCAAGCTGATCCAGGAATGGAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS-3UTR CAA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCGAAACTTTAAAATCCTaGGAACAGCATTCCCATCCC | + |
Preference number: 5 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVETLKS*EQHSHP Trigger: GGGATGGGAATGCTGTTCCAAGGATTTTAAAGTTTC...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | AACACTGATCTAGAAGAGCATGGTTCCACTCTAAGCAGCTCCCGAGTCTCTGTCAATGTCAAAGTCATCTaGCTCAATCATGCGGTATGT | + |
Preference number: 5 (lower is better) Translates to: NTDLEEHGSTLSSSRVSVNVKVI*LNHAVC Trigger: ACATACCGCATGATTGAGCAAGATGACTTTGACATT...GACAGAGACTCGGGAGCTGCTTAGAGTGGAACCATGCTCTTCTAGATCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 |
||
CDS-3UTR CAA 90 bp | AAGTACAAGGAAGAAGGAAGCAATTGCTATTGCCTGGTGGCCCTTGCTTTCCATGAAACTTTAAAATCCTaGGAACAGCATTCCCATCCC | + |
Preference number: 5 (lower is better) Translates to: KYKEEGSNCYCLVALAFHETLKS*EQHSHP Trigger: GGGATGGGAATGCTGTTCCAAGGATTTTAAAGTTTC...ATGGAAAGCAAGGGCCACCAGGCAATAGCAATTGCTTCCTTCTTCCTTGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030201.14 |
||
CDS CCA 72 bp | TCGGGGCCAGTTTGGAGTAGTCAGCTCGGTTGCAGGTaGCAACGCAAACCCGGAGCTTTCGGTTGTTCCCGT | + |
Preference number: 6 (lower is better) Translates to: SGPVWSSQLGCR*QRKPGAFGCSR Trigger: ACGGGAACAACCGAAAGCTCCGGGTTTGCGTTGCCACCTGCAACCGAGCTGACTACTCCAAACTGGCCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000128439.8 ENSMUST00000133709.8 ENSMUST00000140724.3 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS GCA 72 bp | CTTGGCGGAGAGCAGTTTGTCATAGGAAGGGCAGCCTaGCAACAGGATGCGGTCGTGGTCCTCGCACATAGA | + |
Preference number: 6 (lower is better) Translates to: LGGEQFVIGRAA*QQDAVVVLAHR Trigger: TCTATGTGCGAGGACCACGACCGCATCCTGTTGGCAGGCTGCCCTTCCTATGACAAACTGCTCTCCGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS TCA 72 bp | GACGTAGCCAGAGCAAGGGCGTCAAATCGGTCTCCGTaGACAATCATGATGTCGGGCTTCAGGCGATTGAGG | + |
Preference number: 6 (lower is better) Translates to: DVARARASNRSP*TIMMSGFRRLR Trigger: CCTCAATCGCCTGAAGCCCGACATCATGATTGTTCACGGAGACCGATTTGACGCCCTTGCTCTGGCTACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS GCA 72 bp | GTCGTGGTCCTCGCACATAGAGATCAGGTGCTGCTCTaGACTTCTAGTGCAGCACACATGGTAGTGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: VVVLAHRDQVLL*TSSAAHMVVSQ Trigger: CTGGCTCACTACCATGTGTGCTGCACTAGAAGTGCAGAGCAGCACCTGATCTCTATGTGCGAGGACCACGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS TCA 72 bp | TCATCAATGGTCCCGCTGACCTCGCCTCCTTCAATGTaGAGGATGCGGATGTTCATCAAGGCAGCAGACGTA | + |
Preference number: 6 (lower is better) Translates to: SSMVPLTSPPSM*RMRMFIKAADV Trigger: TACGTCTGCTGCCTTGATGAACATCCGCATCCTTCACATTGAAGGAGGCGAGGTCAGCGGGACCATTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS TCA 72 bp | GTGGAGATGCCTGAGCTACTCCCAGAATTCTGCAATTaGGTTTCACAGCTTCCGCGGCAGCTTCCACACACA | + |
Preference number: 6 (lower is better) Translates to: VEMPELLPEFCN*VSQLPRQLPHT Trigger: TGTGTGTGGAAGCTGCCGCGGAAGCTGTGAAACTCAATTGCAGAATTCTGGGAGTAGCTCAGGCATCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172533.8 |
||
CDS CAA 72 bp | CGGTTGCAGGTGGCAACGCAAACCCGGAGCTTTCGGTaGTTCCCGTTCTTCTCCATGACTTGCTTCTTTTTA | + |
Preference number: 6 (lower is better) Translates to: RLQVATQTRSFR*FPFFSMTCFFL Trigger: TAAAAAGAAGCAAGTCATGGAGAAGAACGGGAACAACCGAAAGCTCCGGGTTTGCGTTGCCACCTGCAACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030201.14 ENSMUST00000128439.8 ENSMUST00000140724.3 ENSMUST00000144985.8 |
||
CDS CCA 72 bp | ACCATGGCCGCTTCATCTTCCCCTCTAACAATCGTGTaGAGCCTGGTGTTAATGTCAAAGTCATCTTGCTCA | + |
Preference number: 6 (lower is better) Translates to: TMAASSSPLTIV*SLVLMSKSSCS Trigger: TGAGCAAGATGACTTTGACATTAACACCAGGCTCCACACGATTGTTAGAGGGGAAGATGAAGCGGCCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000128439.8 ENSMUST00000140724.3 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS CAA 90 bp | CCCTCTAACAATCGTGTGGAGCCTGGTGTTAATGTCAAAGTCATCTaGCTCAATCATGCGGTATGTGTTTCCATAGTCGTCAATCAGGTG | + |
Preference number: 6 (lower is better) Translates to: PSNNRVEPGVNVKVI*LNHAVCVSIVVNQV Trigger: CACCTGATTGACGACTATGGAAACACATACCGCATGATTGAGCAAGATGACTTTGACATTAACACCAGGCTCCACACGATTGTTAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000128439.8 ENSMUST00000140724.3 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS CAA 72 bp | GCTGCATCGATATTTGGAAACAGAACTAGGGTCCTCTaGTTAAACGAGATCAGGGCATCCAGTGTTAGCTCA | + |
Preference number: 6 (lower is better) Translates to: AASIFGNRTRVL*LNEIRASSVSS Trigger: TGAGCTAACACTGGATGCCCTGATCTCGTTTAACAAGAGGACCCTAGTTCTGTTTCCAAATATCGATGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |
||
CDS TCA 72 bp | CCTTACATTTTACATCATCGCCTAGCCACATCCGAATaGTGCTCATATAGTCTTTGTTCTTGGCGGAGAGCA | + |
Preference number: 6 (lower is better) Translates to: PYILHHRLATSE*CSYSLCSWRRA Trigger: TGCTCTCCGCCAAGAACAAAGACTATATGAGCATCATTCGGATGTGGCTAGGCGATGATGTAAAATGTAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 |
||
CDS CAA 72 bp | AATCGTGTGGAGCCTGGTGTTAATGTCAAAGTCATCTaGCTCAATCATGCGGTATGTGTTTCCATAGTCGTC | + |
Preference number: 6 (lower is better) Translates to: NRVEPGVNVKVI*LNHAVCVSIVV Trigger: GACGACTATGGAAACACATACCGCATGATTGAGCAAGATGACTTTGACATTAACACCAGGCTCCACACGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000030201.14 ENSMUST00000102936.9 ENSMUST00000128439.8 ENSMUST00000140724.3 ENSMUST00000144985.8 ENSMUST00000172533.8 ENSMUST00000173234.8 ENSMUST00000173274.2 ENSMUST00000173383.2 |
||
CDS CAA 90 bp | CATCTCCTTGCTGCATCGATATTTGGAAACAGAACTAGGGTCCTCTaGTTAAACGAGATCAGGGCATCCAGTGTTAGCTCAAACATCTTT | + |
Preference number: 6 (lower is better) Translates to: HLLAASIFGNRTRVL*LNEIRASSVSSNIF Trigger: AAAGATGTTTGAGCTAACACTGGATGCCCTGATCTCGTTTAACAAGAGGACCCTAGTTCTGTTTCCAAATATCGATGCAGCAAGGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174522.8 |