Pregenerated sensors for GLS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026103Ensembl transcript IDs: ENSMUST00000114510.8, ENSMUST00000114512.8, ENSMUST00000114513.9, ENSMUST00000129107.2, ENSMUST00000155587.8, ENSMUST00000156887.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCACAGTTTCATCAAGGGTGGAGCTGGCTAGGGAATGGAGGGGGTaGCTGAAGCTGACTTTGACTGAAACAGGATCAAAGCAGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: ATVSSRVELAREWRG*LKLTLTETGSKQLE Trigger: CTCCAGCTGCTTTGATCCTGTTTCAGTCAAAGTCAGCTTCAGCCACCCCCTCCATTCCCTAGCCAGCTCCACCCTTGATGAAACTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR GCA 90 bp | AATTTTGGAGGTTGTCCCTGCGTAGGATGTTCCCAGTGCCACCTATaGACCTGTCTTGAGGGGGTGTGGAAGAAGCAACATAGCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: NFGGCPCVGCSQCHL*TCLEGVWKKQHSNR Trigger: CCTGTTGCTATGTTGCTTCTTCCACACCCCCTCAAGACAGGTGCATAGGTGGCACTGGGAACATCCTACGCAGGGACAACCTCCAAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR CCA 90 bp | GGAACATTAGCCACAGTTTCATCAAGGGTGGAGCTGGCTAGGGAATaGAGGGGGTGGCTGAAGCTGACTTTGACTGAAACAGGATCAAAG | + |
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Preference number: 1 (lower is better) Translates to: GTLATVSSRVELARE*RGWLKLTLTETGSK Trigger: CTTTGATCCTGTTTCAGTCAAAGTCAGCTTCAGCCACCCCCTCCATTCCCTAGCCAGCTCCACCCTTGATGAAACTGTGGCTAATGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR CCA 90 bp | GGTCCTTGTTATTATCAGCCAGTAGCGAACAGCCAGAGCAAGACCTaGCACAGGAAAGAGCATACTCAACCAAGCCACAGAGACTGTACA | + |
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Preference number: 1 (lower is better) Translates to: GPCYYQPVANSQSKT*HRKEHTQPSHRDCT Trigger: TGTACAGTCTCTGTGGCTTGGTTGAGTATGCTCTTTCCTGTGCCAGGTCTTGCTCTGGCTGTTCGCTACTGGCTGATAATAACAAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 90 bp | ACCCCGTGGACAGACTGTACAACAAAGCTCACTCCTAAGTGCATATaGGCGTATCATCACCAGGGCTTGAAAATGTACAGAACGCAAACC | + |
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Preference number: 1 (lower is better) Translates to: TPWTDCTTKLTPKCI*AYHHQGLKMYRTQT Trigger: GGTTTGCGTTCTGTACATTTTCAAGCCCTGGTGATGATACGCTCATATGCACTTAGGAGTGAGCTTTGTTGTACAGTCTGTCCACGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCCAAGTGTaGATGCACTTGTGTGCAAAAGTCCTCACTAACATACCCTTTATC | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCVCQV*MHLCAKVLTNIPFI Trigger: GATAAAGGGTATGTTAGTGAGGACTTTTGCACACAAGTGCATGCACACTTGGCATACACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 90 bp | CGACTCCATATGCACTCTACTGTACTGAGAACAACAATGTTATCCTaGGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCCCTA | + |
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Preference number: 1 (lower is better) Translates to: RLHMHSTVLRTTMLS*AKQYILLIWQWFPL Trigger: TAGGGGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTTGTTCTCAGTACAGTAGAGTGCATATGGAGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR TCA 90 bp | GCATACTCAACCAAGCCACAGAGACTGTACAAAACAGCACTGAGCTaGGAGAAGATGAAAACACCTGTCTCAAAGAATATACAGAACCAT | + |
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Preference number: 1 (lower is better) Translates to: AYSTKPQRLYKTALS*EKMKTPVSKNIQNH Trigger: ATGGTTCTGTATATTCTTTGAGACAGGTGTTTTCATCTTCTCTCAGCTCAGTGCTGTTTTGTACAGTCTCTGTGGCTTGGTTGAGTATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 90 bp | ATGCCATTCTCACACATCTGCAATTCTTTGGCTGGAGTGTTTCAGTaGTGTGAAACATTCCTAATACATTGTGATTCTGACAGGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: MPFSHICNSLAGVFQ*CETFLIHCDSDRTE Trigger: TTCTGTCCTGTCAGAATCACAATGTATTAGGAATGTTTCACATCACTGAAACACTCCAGCCAAAGAATTGCAGATGTGTGAGAATGGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR TCA 90 bp | AAGAGACTACATGGAAACAGGAGGTCATTTTCAGAATTGGTAAATTaGAACAGGTACACCCAGGAGATAAATTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: KRLHGNRRSFSELVN*NRYTQEINSLSLSL Trigger: GAGAGAGAGAGAGAGAGAATTTATCTCCTGGGTGTACCTGTTTCAATTTACCAATTCTGAAAATGACCTCCTGTTTCCATGTAGTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR TCA 90 bp | ACACACACACACACATACTTACAAACATACACACAAACCTATGAATaGCTACACTGTCCGAGCAGCATTTTCTGTTCCCTTTGTTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: THTHTYLQTYTQTYE*LHCPSSIFCSLCFQ Trigger: TTGAAAACAAAGGGAACAGAAAATGCTGCTCGGACAGTGTAGTCATTCATAGGTTTGTGTGTATGTTTGTAAGTATGTGTGTGTGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR CCA 90 bp | GATTATTTTAGATGTCATAATTTTGGCTCATCTTCCTTAGATAAATaGCCAAGCTCTATCTCTGATGGTAGAGATGTGAGGCTTGATGGC | + |
|
Preference number: 1 (lower is better) Translates to: DYFRCHNFGSSSLDK*PSSISDGRDVRLDG Trigger: GCCATCAAGCCTCACATCTCTACCATCAGAGATAGAGCTTGGCCATTTATCTAAGGAAGATGAGCCAAAATTATGACATCTAAAATAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 90 bp | AAATCAGACCATCAGGACTTTCCTGTATCTTACTTAGCCTATCAGTaGACTATTTTTCCCGCACTTTCTTTAGTTACAGAATCTGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: KSDHQDFPVSYLAYQ*TIFPALSLVTESAL Trigger: TAGAGCAGATTCTGTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACAGGAAAGTCCTGATGGTCTGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR CCA 90 bp | ACAGAAAAATTAGCTAAGATTGTAAAGCCAAAACAAACAGATCTTTaGAGTTTACAGATGGTAGCAGTTAGCGGCTCATTCACACACACA | + |
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Preference number: 1 (lower is better) Translates to: TEKLAKIVKPKQTDL*SLQMVAVSGSFTHT Trigger: TGTGTGTGTGAATGAGCCGCTAACTGCTACCATCTGTAAACTCCAAAGATCTGTTTGTTTTGGCTTTACAATCTTAGCTAATTTTTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTTTACAGATGGTAGCAGTTAGCGGCTCATTCACACACACACAGGGTCCTTCCAAAGCAAAGAAATaGTGGGTCTGCCAGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: WSLQMVAVSGSFTHTQGPSKAKK*WVCQAW Trigger: CCACGCCTGGCAGACCCACCATTTCTTTGCTTTGGA...AGGACCCTGTGTGTGTGTGAATGAGCCGCTAACTGCTACCATCTGTAAACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR-3UTR GCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTACCATTCTCACACATCTaGAATTCTTTGGCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: AYEHQRGRTASLSKTHHVPFSHI*NSLAGV Trigger: CACTCCAGCCAAAGAATTGCAGATGTGTGAGAATGG...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR-3UTR GCA 90 bp | CACACACAGGGTCCTTGTTATTATCAGCCAGTAGCGAACAGCCAGAGCAAGACCTGTGTATGCCAAGTGTaGATGCACTTGTGTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: HTQGPCYYQPVANSQSKTCVCQV*MHLCAK Trigger: TTTTGCACACAAGTGCATGCACACTTGGCATACACA...GGTCTTGCTCTGGCTGTTCGCTACTGGCTGATAATAACAAGGACCCTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCACAAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTGGGGAATGCATACATCTGCAATTCTTTaGCTGGAGTGTTTCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VHKQGSGKAFKASGWGMHTSAIL*LECFSD Trigger: ATCACTGAAACACTCCAGCCAAAGAATTGCAGATGT...ATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTTGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATGTTATCCTGAGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCGCTGGGGAATGCATATaGACACCAAAGGGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: NNVILSKAIHLTDLAVVSAGECI*TPKGQD Trigger: GTCCTGCCCCTTTGGTGTTCATATGCATTCCCCAGC...GGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR-3UTR GCA 90 bp | AACGCAAACCATGAAGACCACACAGTTCAGCTGGCATTGGTAACTACTCTTTTAGCACGAGGTAACTATTaGTCACATTATGAAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NANHEDHTVQLALVTTLLARGNY*SHYEGR Trigger: CCTCCCTTCATAATGTGAGCAATAGTTACCTCGTGC...TAAAAGAGTAGTTACCAATGCCAGCTGAACTGTGTGGTCTTCATGGTTTGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR-3UTR TCA 90 bp | AACGCAAACCATGAAGACCACACAGTTCAGCTGGCATTGGTAACTACTCTTTTACTATTGCTCACATTATaGAGGGAGGCTGCTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: NANHEDHTVQLALVTTLLLLLTL*REAASF Trigger: AAATGAAGCAGCCTCCCTTCATAATGTGAGCAATAG...TAAAAGAGTAGTTACCAATGCCAGCTGAACTGTGTGGTCTTCATGGTTTGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR-3UTR TCA 90 bp | AACAATGTTATCCTGAGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCGCTGGAGTGTTTCAGTaGTGTGAAACATTCCTAATA | + |
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Preference number: 2 (lower is better) Translates to: NNVILSKAIHLTDLAVVSAGVFQ*CETFLI Trigger: TATTAGGAATGTTTCACATCACTGAAACACTCCAGC...GGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR-3UTR GCA 90 bp | TGTATCTTACTTAGCCTATCAGTGAACTATTTTTCCCGCACTTTCTTTAGTTACCCATTCTCACACATCTaGAATTCTTTGGCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: CILLSLSVNYFSRTFFSYPFSHI*NSLAGV Trigger: CACTCCAGCCAAAGAATTGCAGATGTGTGAGAATGG...GTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGCAGAGGCTTTGCTAATTTGGGACTAGCAAAATTTCTAGTTCTTTATGGCCTTCCTATACAGTTTTaGATGCTTGTTCTTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: IGRGFANLGLAKFLVLYGLPIQF*MLVLNS Trigger: GCTGTTAAGAACAAGCATTCAAAACTGTATAGGAAG...GCCATAAAGAACTAGAAATTTTGCTAGTCCCAAATTAGCAAAGCCTCTGCCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCAGAGGCTTTGCTAATTTGGGACTAGCAAAATTTCTAGTTCTTTATGGCGAATCACAGTCACTCTaGATACAAGAAAAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: IGRGFANLGLAKFLVLYGESQSL*IQEKEM Trigger: CATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTC...GCCATAAAGAACTAGAAATTTTGCTAGTCCCAAATTAGCAAAGCCTCTGCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAACCCTTTTCTTAATATCAGAGTTCCCAGTTTCAAATCAGACCATCAGGTTTAGTTACAGAATCTaGTCTACTATACATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RRTLFLISEFPVSNQTIRFSYRI*STIHVP Trigger: TGGCACATGTATAGTAGAGCAGATTCTGTAACTAAA...CCTGATGGTCTGATTTGAAACTGGGAACTCTGATATTAAGAAAAGGGTTCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR-3UTR CCA 90 bp | TGTATCTTACTTAGCCTATCAGTGAACTATTTTTCCCGCACTTTCTTTAGTTACACATCTGCAATTCTTTaGCTGGAGTGTTTCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: CILLSLSVNYFSRTFFSYTSAIL*LECFSD Trigger: ATCACTGAAACACTCCAGCCAAAGAATTGCAGATGT...GTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR-3UTR GCA 90 bp | TGTATCTTACTTAGCCTATCAGTGAACTATTTTTCCCGCACTTTCTTTAGTTACTTTAGTTACAGAATCTaGTCTACTATACATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: CILLSLSVNYFSRTFFSYFSYRI*STIHVP Trigger: TGGCACATGTATAGTAGAGCAGATTCTGTAACTAAA...GTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR CCA 72 bp | GCCACAGTTTCATCAAGGGTGGAGCTGGCTAGGGAATaGAGGGGGTGGCTGAAGCTGACTTTGACTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: ATVSSRVELARE*RGWLKLTLTET Trigger: TGTTTCAGTCAAAGTCAGCTTCAGCCACCCCCTCCATTCCCTAGCCAGCTCCACCCTTGATGAAACTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR GCA 72 bp | GTGAGGCTTGATGGCTTGCTGAGGAAACATGAAAACTaGACAGTGAGCCAGTGCTCTCTTTCCCAGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VRLDGLLRKHEN*TVSQCSLSQLR Trigger: CCTCAGCTGGGAAAGAGAGCACTGGCTCACTGTGCAGTTTTCATGTTTCCTCAGCAAGCCATCAAGCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR CCA 72 bp | AAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTaGGGAATGCATATGAACACCAAAGGGGCAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: KQGSGKAFKASG*GMHMNTKGAGQ Trigger: CTGTCCTGCCCCTTTGGTGTTCATATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR CCA 72 bp | TCATCAAGGGTGGAGCTGGCTAGGGAATGGAGGGGGTaGCTGAAGCTGACTTTGACTGAAACAGGATCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SSRVELAREWRG*LKLTLTETGSK Trigger: CTTTGATCCTGTTTCAGTCAAAGTCAGCTTCAGCCACCCCCTCCATTCCCTAGCCAGCTCCACCCTTGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR GCA 72 bp | AAACCATGTTCACCCATTAATTTTGGAGGTTGTCCCTaGGTAGGATGTTCCCAGTGCCACCTATGCACCTGT | + |
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Preference number: 3 (lower is better) Translates to: KPCSPINFGGCP*VGCSQCHLCTC Trigger: ACAGGTGCATAGGTGGCACTGGGAACATCCTACGCAGGGACAACCTCCAAAATTAATGGGTGAACATGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGAAATGGTGGGTCTGCCAGGCGTGGTAGTTTGCACCTTTAATCCCAGCACTCTCTTTTACACCACATaGTACAATGCACGAGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: KEMVGLPGVVVCTFNPSTLFYTT*YNARGN Trigger: GTTACCTCGTGCATTGTACAATGTGGTGTAAAAGAG...AGTGCTGGGATTAAAGGTGCAAACTACCACGCCTGGCAGACCCACCATTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 72 bp | CTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATaGTTAGTGTCCACAAGCAGGGCAGTGGCAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LNHSHSGYKKKR*LVSTSRAVARL Trigger: AAGCCTTGCCACTGCCCTGCTTGTGGACACTAATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTATGCCAAGTGTaGATGCACTTGTGTGCAAAAGTCCTCACTAACATA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVCQV*MHLCAKVLTNI Trigger: TATGTTAGTGAGGACTTTTGCACACAAGTGCATGCACACTTGGCATACACACACACACACACACACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR CCA 72 bp | TCACACTATTTTCACCTAATAACAGCATCGACCCCGTaGACAGACTGTACAACAAAGCTCACTCCTAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SHYFHLITASTP*TDCTTKLTPKC Trigger: GCACTTAGGAGTGAGCTTTGTTGTACAGTCTGTCCACGGGGTCGATGCTGTTATTAGGTGAAAATAGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 72 bp | ACAGACTGTACAACAAAGCTCACTCCTAAGTGCATATaGGCGTATCATCACCAGGGCTTGAAAATGTACAGA | + |
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Preference number: 3 (lower is better) Translates to: TDCTTKLTPKCI*AYHHQGLKMYR Trigger: TCTGTACATTTTCAAGCCCTGGTGATGATACGCTCATATGCACTTAGGAGTGAGCTTTGTTGTACAGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 72 bp | ACCAAGCCACAGAGACTGTACAAAACAGCACTGAGCTaGGAGAAGATGAAAACACCTGTCTCAAAGAATATA | + |
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Preference number: 3 (lower is better) Translates to: TKPQRLYKTALS*EKMKTPVSKNI Trigger: TATATTCTTTGAGACAGGTGTTTTCATCTTCTCTCAGCTCAGTGCTGTTTTGTACAGTCTCTGTGGCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 72 bp | ATGCACTCTACTGTACTGAGAACAACAATGTTATCCTaGGCAAAGCAATACATCTTACTGATTTGGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: MHSTVLRTTMLS*AKQYILLIWQW Trigger: CCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTTGTTCTCAGTACAGTAGAGTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR TCA 72 bp | CACACACACATACTTACAAACATACACACAAACCTATaGATGACTACACTGTCCGAGCAGCATTTTCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: HTHILTNIHTNL*MTTLSEQHFLF Trigger: GAACAGAAAATGCTGCTCGGACAGTGTAGTCATTCATAGGTTTGTGTGTATGTTTGTAAGTATGTGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR CCA 72 bp | AGATGTCATAATTTTGGCTCATCTTCCTTAGATAAATaGCCAAGCTCTATCTCTGATGGTAGAGATGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: RCHNFGSSSLDK*PSSISDGRDVR Trigger: CCTCACATCTCTACCATCAGAGATAGAGCTTGGCCATTTATCTAAGGAAGATGAGCCAAAATTATGACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| 3UTR TCA 72 bp | TCACACATCTGCAATTCTTTGGCTGGAGTGTTTCAGTaGTGTGAAACATTCCTAATACATTGTGATTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SHICNSLAGVFQ*CETFLIHCDSD Trigger: GTCAGAATCACAATGTATTAGGAATGTTTCACATCACTGAAACACTCCAGCCAAAGAATTGCAGATGTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR TCA 72 bp | CATGGAAACAGGAGGTCATTTTCAGAATTGGTAAATTaGAACAGGTACACCCAGGAGATAAATTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HGNRRSFSELVN*NRYTQEINSLS Trigger: AGAGAGAGAATTTATCTCCTGGGTGTACCTGTTTCAATTTACCAATTCTGAAAATGACCTCCTGTTTCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| 3UTR CCA 72 bp | AATCATGGTGCTCAATTACCTGAATCACAGTCACTCTaGATACAAGAAAAAGAGATGATTAGTGTCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: NHGAQLPESQSL*IQEKEMISVHK Trigger: CTTGTGGACACTAATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACCATGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| 3UTR TCA 72 bp | CATCAGGACTTTCCTGTATCTTACTTAGCCTATCAGTaGACTATTTTTCCCGCACTTTCTTTAGTTACAGAA | + |
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Preference number: 3 (lower is better) Translates to: HQDFPVSYLAYQ*TIFPALSLVTE Trigger: TTCTGTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACAGGAAAGTCCTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| CDS-3UTR GCA 90 bp | AGCAAAGAAATGGTGGGTCTGCCAGGCGTGGTAGTTTGCACCTTTAATCCCAGCCGGCCACCATCTCCTTaGCCTCGCTGTTGCCGAACG | + |
|
Preference number: 4 (lower is better) Translates to: SKEMVGLPGVVVCTFNPSRPPSP*PRCCRT Trigger: CGTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCG...GCTGGGATTAAAGGTGCAAACTACCACGCCTGGCAGACCCACCATTTCTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AACGCAAACCATGAAGACCACACAGTTCAGCTGGCATTGGTAACTACTCTTTTACCTTGCCCTCGCTGTTaGCGAACGCGTCGGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NANHEDHTVQLALVTTLLPCPRC*RTRRSP Trigger: GGGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGG...TAAAAGAGTAGTTACCAATGCCAGCTGAACTGTGTGGTCTTCATGGTTTGCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGAAATGGTGGGTCTGCCAGGCGTGGTAGTTTGCACCTTTAATCCCAGCCATGGAGGGCTGTTCTaGAGTCATAATCCCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKEMVGLPGVVVCTFNPSHGGLF*SHNPAA Trigger: AGCAGCGGGATTATGACTCCAGAACAGCCCTCCATG...GCTGGGATTAAAGGTGCAAACTACCACGCCTGGCAGACCCACCATTTCTTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | AACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACCGACTTCACCCTTTaGTCACCTCCTTCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSDLSCAHNEGSSGNTAVTDFTL*SPPSLR Trigger: TCGGAGAGAAGGAGGTGATCAAAGGGTGAAGTCGGT...CACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAATGACCCTCTGCTGCTaGGACATGGAGGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSDLSCAHNEGSSGNTAMTLCC*DMEGCS Trigger: AGAACAGCCCTCCATGTCGCAGCAGCAGAGGGTCAT...TGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACTCTGCTGCTGCGACATaGAGGGCTGTTCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNSAAAT*RAVLES Trigger: TGACTCCAGAACAGCCCTCCATGTCGCAGCAGCAGA...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCATCTGCTGCTGCGACATaGAGGGCTGTTCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSDLSCAHNEGSSGNTASAAAT*RAVLES Trigger: TGACTCCAGAACAGCCCTCCATGTCGCAGCAGCAGA...TGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AACAATGTTATCCTGAGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCCCTTGCCCTCGCTGTTaGCGAACGCGTCGGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NNVILSKAIHLTDLAVVSPCPRC*RTRRSP Trigger: GGGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGG...GGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR TCA 90 bp | CACACACAGGGTCCTTGTTATTATCAGCCAGTAGCGAACAGCCAGAGCAAGACCAACACATCATGCCCATaGCGTTGGGGACAACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQGPCYYQPVANSQSKTNTSCP*RWGQLK Trigger: TTTTAGTTGTCCCCAACGTCATGGGCATGATGTGTT...GGTCTTGCTCTGGCTGTTCGCTACTGGCTGATAATAACAAGGACCCTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTCGGCCACCATCTCCTTaGCCTCGCTGTTGCCGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GAQLPESQSLWIQEKEMIRPPSP*PRCCRT Trigger: CGTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCG...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACAAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTGGGGAATGCATTCTTTCACCAGTAATTaGGCAGAAACCACCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHKQGSGKAFKASGWGMHSFTSN*AETTIS Trigger: GCTAATGGTGGTTTCTGCCCAATTACTGGTGAAAGA...ATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTTGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR CCA 90 bp | AACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGCCGTCGAGATTCTTGTaGACAGTCTGGTTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSDLSCAHNEGSSGNTAVPSRFL*TVWFPF Trigger: AAAGGGAAACCAGACTGTCCACAAGAATCTCGACGG...CACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTAGATCTTTGTCTAGCATaGCACCATCTGACGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYEHQRGRTASLSKTHHVDLCLA*HHLTLS Trigger: AGACAACGTCAGATGGTGTCATGCTAGACAAAGATC...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR TCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTAAACACATCATGCCCATaGCGTTGGGGACAACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AYEHQRGRTASLSKTHHVNTSCP*RWGQLK Trigger: TTTTAGTTGTCCCCAACGTCATGGGCATGATGTGTT...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | GTCCACAAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTGGGGAATGCATAGAAGTCACAACAATTaGTCCAGCATTTACCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKQGSGKAFKASGWGMHRSHNN*SSIYHR Trigger: CCTATGGTAAATGCTGGAGCAATTGTTGTGACTTCT...ATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTTGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTATCCCAACCATGTCTGTaGCTTCTGGAAAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYEHQRGRTASLSKTHHVSQPCL*LLENTS Trigger: AGAAGTGTTTTCCAGAAGGCACAGACATGGTTGGGA...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTTAGATAAATGGCCAAGCTCTATCTCTGATGGTAGAGATGTGAGGCTTATGACCCTCTGCTGCTaGGACATGGAGGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLDKWPSSISDGRDVRLMTLCC*DMEGCS Trigger: AGAACAGCCCTCCATGTCGCAGCAGCAGAGGGTCAT...AAGCCTCACATCTCTACCATCAGAGATAGAGCTTGGCCATTTATCTAAGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGATCTTTGTCTAGCATaGCACCATCTGACGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSDLSCAHNEGSSGNTADLCLA*HHLTLS Trigger: AGACAACGTCAGATGGTGTCATGCTAGACAAAGATC...TGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTTACAGATGGTAGCAGTTAGCGGCTCATTCACACACACACAGGGTCCTAGCCATCACACTTGCTaGTTCACATGTCACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSLQMVAVSGSFTHTQGPSHHTC*FTCHFN Trigger: ATTGAAGTGACATGTGAATCAGCAAGTGTGATGGCT...AGGACCCTGTGTGTGTGTGAATGAGCCGCTAACTGCTACCATCTGTAAACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTTAGATAAATGGCCAAGCTCTATCTCTGATGGTAGAGATGTGAGGCTTACCGACTTCACCCTTTaGTCACCTCCTTCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLDKWPSSISDGRDVRLTDFTL*SPPSLR Trigger: TCGGAGAGAAGGAGGTGATCAAAGGGTGAAGTCGGT...AAGCCTCACATCTCTACCATCAGAGATAGAGCTTGGCCATTTATCTAAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACTCCCAACCATGTCTGTaGCTTCTGGAAAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNSQPCL*LLENTS Trigger: AGAAGTGTTTTCCAGAAGGCACAGACATGGTTGGGA...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTGGGGAATGCATATGAACAGCAACTCCAGATTTTaGAGGAAGACCAACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQGSGKAFKASGWGMHMNSNSRF*RKTNME Trigger: TTCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCT...GTTCATATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTAAGCAACTCCAGATTTTaGAGGAAGACCAACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AYEHQRGRTASLSKTHHVSNSRF*RKTNME Trigger: TTCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCT...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTAGATAAATGGCCAAGCTCTATCTCTGATGGTAGAGATGTGAGGCTTGCTGCTCCATGTCCATaGCTGACAGAGCAAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLDKWPSSISDGRDVRLAAPCP*LTEQTF Trigger: GAAGGTTTGCTCTGTCAGCCATGGACATGGAGCAGC...AAGCCTCACATCTCTACCATCAGAGATAGAGCTTGGCCATTTATCTAAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATCCGTCGAGATTCTTGTaGACAGTCTGGTTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNPSRFL*TVWFPF Trigger: AAAGGGAAACCAGACTGTCCACAAGAATCTCGACGG...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTATACACTCTTTCAACCTaGGATCAGATGTTCGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: AYEHQRGRTASLSKTHHVYTLST*DQMFAI Trigger: GATTGCGAACATCTGATCCCAGGTTGAAAGAGTGTA...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR TCA 90 bp | CACACACAGGGTCCTTGTTATTATCAGCCAGTAGCGAACAGCCAGAGCAAGACCCCATCTGACGTTGTCTaGAGAGTTAATCTTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: HTQGPCYYQPVANSQSKTPSDVV*RVNLNI Trigger: TATGTTAAGATTAACTCTTCAGACAACGTCAGATGG...GGTCTTGCTCTGGCTGTTCGCTACTGGCTGATAATAACAAGGACCCTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | GCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACAAACACATCATGCCCATaGCGTTGGGGACAACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHNEGSSGNTAVTDVVNTNTSCP*RWGQLK Trigger: TTTTAGTTGTCCCCAACGTCATGGGCATGATGTGTT...TGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCATCGACCCCGTGGACAGACTGTACAACAAAGCTCACTCCTAAGTGCATAAGAAGTCACAACAATTaGTCCAGCATTTACCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TASTPWTDCTTKLTPKCIRSHNN*SSIYHR Trigger: CCTATGGTAAATGCTGGAGCAATTGTTGTGACTTCT...TATGCACTTAGGAGTGAGCTTTGTTGTACAGTCTGTCCACGGGGTCGATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATGGTGGGTCTGCCAGGCGTGGTAGTTTGCACCTTTAATCCCAGCACTTACATGCCACAAGAATaGATCAAGCTCAGTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: KEMVGLPGVVVCTFNPSTYMPQE*IKLSVF Trigger: GAATACACTGAGCTTGATGCATTCTTGTGGCATGTA...AGTGCTGGGATTAAAGGTGCAAACTACCACGCCTGGCAGACCCACCATTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAAGCAACTCCAGATTTTaGAGGAAGACCAACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNSDLSCAHNEGSSGNTASNSRF*RKTNME Trigger: TTCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCT...TGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACAGCAACTCCAGATTTTaGAGGAAGACCAACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNSNSRF*RKTNME Trigger: TTCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCT...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACCACATCTCCAGTGTATaGGGCAAACAGAAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNHISSV*GKQKVY Trigger: ATAAACCTTCTGTTTGCCGCATACACTGGAGATGTG...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCATCTTTCACCAGTAATTaGGCAGAAACCACCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSDLSCAHNEGSSGNTASFTSN*AETTIS Trigger: GCTAATGGTGGTTTCTGCCCAATTACTGGTGAAAGA...TGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACTACACTCTTTCAACCTaGGATCAGATGTTCGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNYTLST*DQMFAI Trigger: GATTGCGAACATCTGATCCCAGGTTGAAAGAGTGTA...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATAGCCATCACACTTGCTaGTTCACATGTCACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNSHHTC*FTCHFN Trigger: ATTGAAGTGACATGTGAATCAGCAAGTGTGATGGCT...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATCCAATAGAATGCCTTTaGCCATCTACAGTACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNPIECL*PSTVQT Trigger: TGTCTGTACTGTAGATGGGCAAAGGCATTCTATTGG...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGGAAAGGGTTTACTTTaGAAGCTTCCAGCAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KNSDLSCAHNEGSSGNTAGKGLL*KLPAKT Trigger: AGTTTTTGCTGGAAGCTTGCAAAGTAAACCCTTTCC...TGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGAAATGGTGGGTCTGCCAGGCGTGGTAGTTTGCACCTTTAATCCCAGCTCCTGTAGATTTGAGTaGTGTAATAAACTTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKEMVGLPGVVVCTFNPSSCRFE*CNKLVN Trigger: GTTCACAAGTTTATTACAGCACTCAAATCTACAGGA...GCTGGGATTAAAGGTGCAAACTACCACGCCTGGCAGACCCACCATTTCTTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGCCAACAGTACTGGCATGGAATAAGAACAGCAACAAGACAAACCACATCTTTCACCAGTAATTaGGCAGAAACCACCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGQQYWHGIRTATRQTTSFTSN*AETTIS Trigger: GCTAATGGTGGTTTCTGCCCAATTACTGGTGAAAGA...TGTGGTTTGTCTTGTTGCTGTTCTTATTCCATGCCAGTACTGTTGGCCCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATTCTTTCACCAGTAATTaGGCAGAAACCACCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNSFTSN*AETTIS Trigger: GCTAATGGTGGTTTCTGCCCAATTACTGGTGAAAGA...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | AACAATGTTATCCTGAGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCGCAGGAAGACCAACATaGAACGCAAACTGCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NNVILSKAIHLTDLAVVSAGRPT*NANCPE Trigger: CTCAGGGCAGTTTGCGTTCCATGTTGGTCTTCCTGC...GGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR CCA 90 bp | TCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAGAAGCTGCTCCATGTCCATaGCTGACAGAGCAAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNTAVTDVVNTHYYQIEAAPCP*LTEQTF Trigger: GAAGGTTTGCTCTGTCAGCCATGGACATGGAGCAGC...TTCTATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CCA 90 bp | TCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAGAACATGGAGGGCTGTTCTaGAGTCATAATCCCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNTAVTDVVNTHYYQIEHGGLF*SHNPAA Trigger: AGCAGCGGGATTATGACTCCAGAACAGCCCTCCATG...TTCTATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTAAAGGTCCAAGCCTTTaGTCACCTCCTTCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAQLPESQSLWIQEKEMIKGPSL*SPPSLR Trigger: TCGGAGAGAAGGAGGTGATCAAAGGCTTGGACCTTT...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | GCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACAACCTTCCCTCCAGACTaGTTTTTAGCACTTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: AHNEGSSGNTAVTDVVNTTFPPD*FLALSY Trigger: ATATGAAAGTGCTAAAAAGCAGTCTGGAGGGAAGGT...TGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATAGAAGTCACAACAATTaGTCCAGCATTTACCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNRSHNN*SSIYHR Trigger: CCTATGGTAAATGCTGGAGCAATTGTTGTGACTTCT...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTGGGGAATGCATATGAACTTCAGACTGAAACGTTaGATTACTGAATCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: KQGSGKAFKASGWGMHMNFRLKR*ITESNI Trigger: TATGTTGGATTCAGTAATGCAACGTTTCAGTCTGAA...GTTCATATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTAAAACCCACCATGTACTTTTCTTGTCCTTCTaGAATTGTATAGAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AYEHQRGRTASLSKTHHVLFLSF*NCIEQQ Trigger: TTGCTGTTCTATACAATTGCAGAAGGACAAGAAAAG...TACATGGTGGGTTTTAGAAAGGCTGGCTGTCCTGCCCCTTTGGTGTTCATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR GCA 90 bp | AACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGCTTTTCTTGTCCTTCTaGAATTGTATAGAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSDLSCAHNEGSSGNTAVLFLSF*NCIEQQ Trigger: TTGCTGTTCTATACAATTGCAGAAGGACAAGAAAAG...CACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGGCAGTGGCAAGGCTTTTAAAGCATCAGGCTGGGGAATGCATATGAACTCCTGTAGATTTGAGTaGTGTAATAAACTTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQGSGKAFKASGWGMHMNSCRFE*CNKLVN Trigger: GTTCACAAGTTTATTACAGCACTCAAATCTACAGGA...GTTCATATGCATTCCCCAGCCTGATGCTTTAAAAGCCTTGCCACTGCCCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| 3UTR CAA 72 bp | AACGCAAACCATGAAGACCACACAGTTCAGCTGGCATaGGTAACTACTCTTTTACACCACATTGTACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NANHEDHTVQLA*VTTLLHHIVQC Trigger: GCATTGTACAATGTGGTGTAAAAGAGTAGTTACCAATGCCAGCTGAACTGTGTGGTCTTCATGGTTTGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR TCA 90 bp | CAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTAGTGTCCCAAAGGAATGCCTTTaGTCACCTCCTTCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLPESQSLWIQEKEMISVPKECL*SPPSLR Trigger: TCGGAGAGAAGGAGGTGATCAAAGGCATTCCTTTGG...GACACTAATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACTTCAGACTGAAACGTTaGATTACTGAATCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNFRLKR*ITESNI Trigger: TATGTTGGATTCAGTAATGCAACGTTTCAGTCTGAA...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATATCCCAACCATGTCTGTaGCTTCTGGAAAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNTAVTDVVNTHYYQISQPCL*LLENTS Trigger: AGAAGTGTTTTCCAGAAGGCACAGACATGGTTGGGA...TATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTTCCCAACCATGTCTGTaGCTTCTGGAAAACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAQLPESQSLWIQEKEMISQPCL*LLENTS Trigger: AGAAGTGTTTTCCAGAAGGCACAGACATGGTTGGGA...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR TCA 90 bp | AACAATGTTATCCTGAGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCAGCCATCACACTTGCTaGTTCACATGTCACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNVILSKAIHLTDLAVVSSHHTC*FTCHFN Trigger: ATTGAAGTGACATGTGAATCAGCAAGTGTGATGGCT...GGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTAGCCATCACACTTGCTaGTTCACATGTCACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAQLPESQSLWIQEKEMISHHTC*FTCHFN Trigger: ATTGAAGTGACATGTGAATCAGCAAGTGTGATGGCT...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR TCA 90 bp | CAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTAGTGTCAACACATCATGCCCATaGCGTTGGGGACAACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPESQSLWIQEKEMISVNTSCP*RWGQLK Trigger: TTTTAGTTGTCCCCAACGTCATGGGCATGATGTGTT...GACACTAATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAACCTTCCCTCCAGACTaGTTTTTAGCACTTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNTAVTDVVNTHYYQITFPPD*FLALSY Trigger: ATATGAAAGTGCTAAAAAGCAGTCTGGAGGGAAGGT...TATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTCCAATAGAATGCCTTTaGCCATCTACAGTACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GAQLPESQSLWIQEKEMIPIECL*PSTVQT Trigger: TGTCTGTACTGTAGATGGGCAAAGGCATTCTATTGG...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATACCATCTGACGTTGTCTaGAGAGTTAATCTTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNTAVTDVVNTHYYQIPSDVV*RVNLNI Trigger: TATGTTAAGATTAACTCTTCAGACAACGTCAGATGG...TATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AATATCAGAGTTCCCAGTTTCAAATCAGACCATCAGGACTTTCCTGTATCTTACAGAAGTCACAACAATTaGTCCAGCATTTACCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIRVPSFKSDHQDFPVSYRSHNN*SSIYHR Trigger: CCTATGGTAAATGCTGGAGCAATTGTTGTGACTTCT...GTAAGATACAGGAAAGTCCTGATGGTCTGATTTGAAACTGGGAACTCTGATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTTACATGCCACAAGAATaGATCAAGCTCAGTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GAQLPESQSLWIQEKEMIYMPQE*IKLSVF Trigger: GAATACACTGAGCTTGATGCATTCTTGTGGCATGTA...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR GCA 90 bp | TCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAGAATACATGCCACAAGAATaGATCAAGCTCAGTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNTAVTDVVNTHYYQIEYMPQE*IKLSVF Trigger: GAATACACTGAGCTTGATGCATTCTTGTGGCATGTA...TTCTATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| 3UTR CAA 72 bp | ACATGGAAACAGGAGGTCATTTTCAGAATTGGTAAATaGAAACAGGTACACCCAGGAGATAAATTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWKQEVIFRIGK*KQVHPGDKFSL Trigger: GAGAGAGAATTTATCTCCTGGGTGTACCTGTTTCAATTTACCAATTCTGAAAATGACCTCCTGTTTCCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATATTCAGACTGAAACGTTaGATTACTGAATCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNTAVTDVVNTHYYQIFRLKR*ITESNI Trigger: TATGTTGGATTCAGTAATGCAACGTTTCAGTCTGAA...TATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR GCA 90 bp | AACAAGAAACAAAAGCCTAAAGATGTTTCCGATGTTAAAAGGAGAATCGTTCTGACCTTCCCTCCAGACTaGTTTTTAGCACTTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: NKKQKPKDVSDVKRRIVLTFPPD*FLALSY Trigger: ATATGAAAGTGCTAAAAAGCAGTCTGGAGGGAAGGT...CAGAACGATTCTCCTTTTAACATCGGAAACATCTTTAGGCTTTTGTTTCTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGAAACAAAAGCCTAAAGATGTTTCCGATGTTAAAAGGAGAATCGTTCTGTACATGCCACAAGAATaGATCAAGCTCAGTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: NKKQKPKDVSDVKRRIVLYMPQE*IKLSVF Trigger: GAATACACTGAGCTTGATGCATTCTTGTGGCATGTA...CAGAACGATTCTCCTTTTAACATCGGAAACATCTTTAGGCTTTTGTTTCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR TCA 90 bp | TGTATCTTACTTAGCCTATCAGTGAACTATTTTTCCCGCACTTTCTTTAGTTACCCATCTGACGTTGTCTaGAGAGTTAATCTTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: CILLSLSVNYFSRTFFSYPSDVV*RVNLNI Trigger: TATGTTAAGATTAACTCTTCAGACAACGTCAGATGG...GTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR GCA 90 bp | TGTATCTTACTTAGCCTATCAGTGAACTATTTTTCCCGCACTTTCTTTAGTTACTTCAGACTGAAACGTTaGATTACTGAATCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: CILLSLSVNYFSRTFFSYFRLKR*ITESNI Trigger: TATGTTGGATTCAGTAATGCAACGTTTCAGTCTGAA...GTAACTAAAGAAAGTGCGGGAAAAATAGTTCACTGATAGGCTAAGTAAGATACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGAAATGGTGGGTCTGCCAGGCGTGGTAGTTTGCACCTTTAATCCCAGCTCCTTGCCCTCGCTGTaGCCGAACGCGTCGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKEMVGLPGVVVCTFNPSSLPSL*PNASVS Trigger: GGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGGA...GCTGGGATTAAAGGTGCAAACTACCACGCCTGGCAGACCCACCATTTCTTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS GCA 90 bp | GCAAGCTTCCAGCAAAAACTTGACAACTTCAACATGACCCTCTGCTaGTGCGACATGGAGGGCTGTTCTGGAGTCATAATCCCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASFQQKLDNFNMTLC*CDMEGCSGVIIPLL Trigger: GAGCAGCGGGATTATGACTCCAGAACAGCCCTCCATGTCGCAGCAGCAGAGGGTCATGTTGAAGTTGTCAAGTTTTTGCTGGAAGCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000156887.8 |
||
| CDS GCA 90 bp | AGCTTCCAGCAAAAACTTGACAACTTCAACATGACCCTCTGCTGCTaGGACATGGAGGGCTGTTCTGGAGTCATAATCCCGCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFQQKLDNFNMTLCC*DMEGCSGVIIPLLH Trigger: ATGGAGCAGCGGGATTATGACTCCAGAACAGCCCTCCATGTCGCAGCAGCAGAGGGTCATGTTGAAGTTGTCAAGTTTTTGCTGGAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000156887.8 |
||
| CDS CCA 90 bp | TGTATTCCGAACTGCCTCAGGACTGAGGACTCTTTCACCAGTAATTaGGCAGAAACCACCATTAGCCAAGGTGGCAGCCATCACACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CIPNCLRTEDSFTSN*AETTISQGGSHHTC Trigger: GCAAGTGTGATGGCTGCCACCTTGGCTAATGGTGGTTTCTGCCCAATTACTGGTGAAAGAGTCCTCAGTCCTGAGGCAGTTCGGAATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000155587.8 |
||
| CDS GCA 90 bp | TTTGCAAGCTTCCAGCAAAAACTTGACAACTTCAACATGACCCTCTaGTGCTGCGACATGGAGGGCTGTTCTGGAGTCATAATCCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FASFQQKLDNFNMTL*CCDMEGCSGVIIPL Trigger: CAGCGGGATTATGACTCCAGAACAGCCCTCCATGTCGCAGCAGCAGAGGGTCATGTTGAAGTTGTCAAGTTTTTGCTGGAAGCTTGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000156887.8 |
||
| CDS-3UTR CAA 90 bp | CACACACAGGGTCCTTGTTATTATCAGCCAGTAGCGAACAGCCAGAGCAAGACCCAGCAACTCCAGATTTaGCAGGAAGACCAACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: HTQGPCYYQPVANSQSKTQQLQI*QEDQHG Trigger: TCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCTG...GGTCTTGCTCTGGCTGTTCGCTACTGGCTGATAATAACAAGGACCCTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | AACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACACTGTTGCCCATCTaGTCAAGAGGAGGAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: NSDLSCAHNEGSSGNTAVTLLPI*SRGGDQ Trigger: TTGGTCTCCTCCTCTTGACAAGATGGGCAACAGTGT...CACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | AATATCAGAGTTCCCAGTTTCAAATCAGACCATCAGGACTTTCCTGTATCTTACTCCTTGCCCTCGCTGTaGCCGAACGCGTCGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NIRVPSFKSDHQDFPVSYSLPSL*PNASVS Trigger: GGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGGA...GTAAGATACAGGAAAGTCCTGATGGTCTGATTTGAAACTGGGAACTCTGATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR CAA 90 bp | AACAATGTTATCCTGAGCAAAGCAATACATCTTACTGATTTGGCAGTGGTTTCCGCGGCCACCATCTCCTaGCCCTCGCTGTTGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NNVILSKAIHLTDLAVVSAATIS*PSLLPN Trigger: GTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCGC...GGAAACCACTGCCAAATCAGTAAGATGTATTGCTTTGCTCAGGATAACATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR CAA 90 bp | TCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAGAAGCGGCCACCATCTCCTaGCCCTCGCTGTTGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGNTAVTDVVNTHYYQIEAATIS*PSLLPN Trigger: GTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCGC...TTCTATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS TCA 90 bp | TGGGCAGAAACCACCATTAGCCAAGGTGGCAGCCATCACACTTGCTaGTTCACATGTCACTTCAATAGAGCACAGCTGGAAGTAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: WAETTISQGGSHHTC*FTCHFNRAQLEVKI Trigger: GATTTTTACTTCCAGCTGTGCTCTATTGAAGTGACATGTGAATCAGCAAGTGTGATGGCTGCCACCTTGGCTAATGGTGGTTTCTGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000155587.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATTGGCAGCCATCACACTaGCTGATTCACATGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNWQPSH*LIHMSL Trigger: AAGTGACATGTGAATCAGCAAGTGTGATGGCTGCCA...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGGCCAACAGTACTGGCATGGAATAAGAACAGCAACAAGACAAACCACACAGCAACTCCAGATTTaGCAGGAAGACCAACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLGQQYWHGIRTATRQTTQQLQI*QEDQHG Trigger: TCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCTG...TGTGGTTTGTCTTGTTGCTGTTCTTATTCCATGCCAGTACTGTTGGCCCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
||
| CDS-3UTR CAA 90 bp | GCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACACAGCAACTCCAGATTTaGCAGGAAGACCAACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: AHNEGSSGNTAVTDVVNTQQLQI*QEDQHG Trigger: TCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCTG...TGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACGGGAAAGGGTTTACTTaGCAAGCTTCCAGCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNGKGFT*QASSKN Trigger: GTTTTTGCTGGAAGCTTGCAAAGTAAACCCTTTCCC...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACATCATCAGAATCCCCTaGAGGTGTGTACTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNIIRIP*RCVLNL Trigger: CAAGTTCAGTACACACCTCAAGGGGATTCTGATGAT...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | CACACACAGGGTCCTTGTTATTATCAGCCAGTAGCGAACAGCCAGAGCAAGACCAGACAAAAAGGAACTTaGGTATCTCCAATAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: HTQGPCYYQPVANSQSKTRQKGT*VSPIEC Trigger: GCATTCTATTGGAGATACCAAAGTTCCTTTTTGTCT...GGTCTTGCTCTGGCTGTTCGCTACTGGCTGATAATAACAAGGACCCTGTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
||
| CDS-3UTR CAA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACATCATGCCCATGACGTaGGGGACAACTAAAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNIMPMT*GTTKRI Trigger: TATTCTTTTAGTTGTCCCCAACGTCATGGGCATGAT...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | AACGCAAACCATGAAGACCACACAGTTCAGCTGGCATTGGTAACTACTCTTTTAACACTGTTGCCCATCTaGTCAAGAGGAGGAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: NANHEDHTVQLALVTTLLTLLPI*SRGGDQ Trigger: TTGGTCTCCTCCTCTTGACAAGATGGGCAACAGTGT...TAAAAGAGTAGTTACCAATGCCAGCTGAACTGTGTGGTCTTCATGGTTTGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | GCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACAGGGAAAGGGTTTACTTaGCAAGCTTCCAGCAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: AHNEGSSGNTAVTDVVNTGKGFT*QASSKN Trigger: GTTTTTGCTGGAAGCTTGCAAAGTAAACCCTTTCCC...TGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATTTATTCCACCTGTCCTaGGGGAAAGGGTTTACTTTG | + |
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Preference number: 5 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNLFHLS*GKGFTL Trigger: CAAAGTAAACCCTTTCCCCAAGGACAGGTGGAATAA...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | GCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACATTATTCCACCTGTCCTaGGGGAAAGGGTTTACTTTG | + |
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Preference number: 5 (lower is better) Translates to: AHNEGSSGNTAVTDVVNTLFHLS*GKGFTL Trigger: CAAAGTAAACCCTTTCCCCAAGGACAGGTGGAATAA...TGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | TGGAGTTTACAGATGGTAGCAGTTAGCGGCTCATTCACACACACACAGGGTCCTAGGTGTGTACTGAACTaGGTATTCCTGAAGGATTTT | + |
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Preference number: 5 (lower is better) Translates to: WSLQMVAVSGSFTHTQGPRCVLN*VFLKDF Trigger: AAAATCCTTCAGGAATACCAAGTTCAGTACACACCT...AGGACCCTGTGTGTGTGTGAATGAGCCGCTAACTGCTACCATCTGTAAACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | ACAGCATCGACCCCGTGGACAGACTGTACAACAAAGCTCACTCCTAAGTGCATACGCAATCCTGTAGATTaGAGTGCTGTAATAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: TASTPWTDCTTKLTPKCIRNPVD*SAVINL Trigger: CAAGTTTATTACAGCACTCAAATCTACAGGATTGCG...TATGCACTTAGGAGTGAGCTTTGTTGTACAGTCTGTCCACGGGGTCGATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATATCATGCCCATGACGTaGGGGACAACTAAAAGAATA | + |
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Preference number: 5 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNIMPMT*GTTKRI Trigger: TATTCTTTTAGTTGTCCCCAACGTCATGGGCATGAT...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | TTCCCAAAGAACTCAGATTTGTCGTGTGCGCACAATGAAGGAAGCTCCGGTAACAGACAAAAAGGAACTTaGGTATCTCCAATAGAATGC | + |
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Preference number: 5 (lower is better) Translates to: FPKNSDLSCAHNEGSSGNRQKGT*VSPIEC Trigger: GCATTCTATTGGAGATACCAAAGTTCCTTTTTGTCT...GTTACCGGAGCTTCCTTCATTGTGCGCACACGACAAATCTGAGTTCTTTGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTACACTGTTGCCCATCTaGTCAAGAGGAGGAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: GAQLPESQSLWIQEKEMITLLPI*SRGGDQ Trigger: TTGGTCTCCTCCTCTTGACAAGATGGGCAACAGTGT...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGAGGCTTTGCTAATTTGGGACTAGCAAAATTTCTAGTTCTTTATGGCTGGCAGCCATCACACTaGCTGATTCACATGTCACTT | + |
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Preference number: 5 (lower is better) Translates to: IGRGFANLGLAKFLVLYGWQPSH*LIHMSL Trigger: AAGTGACATGTGAATCAGCAAGTGTGATGGCTGCCA...GCCATAAAGAACTAGAAATTTTGCTAGTCCCAAATTAGCAAAGCCTCTGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| CDS-3UTR CAA 90 bp | AGAAGAACCCTTTTCTTAATATCAGAGTTCCCAGTTTCAAATCAGACCATCAGGCAGCAACTCCAGATTTaGCAGGAAGACCAACATGGA | + |
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Preference number: 5 (lower is better) Translates to: RRTLFLISEFPVSNQTIRQQLQI*QEDQHG Trigger: TCCATGTTGGTCTTCCTGCAAAATCTGGAGTTGCTG...CCTGATGGTCTGATTTGAAACTGGGAACTCTGATATTAAGAAAAGGGTTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| CDS-3UTR CAA 90 bp | TGTGCGCACAATGAAGGAAGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATCTTGTCCTTCTGCAATaGTATAGAACAGCAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: CAHNEGSSGNTAVTDVVNLVLLQ*YRTANL Trigger: AAGATTTGCTGTTCTATACAATTGCAGAAGGACAAG...ATTTACAACATCTGTCACTGCAGTGTTACCGGAGCTTCCTTCATTGTGCGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | TCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAGAAATCATCAGAATCCCCTaGAGGTGTGTACTGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: SGNTAVTDVVNTHYYQIEIIRIP*RCVLNL Trigger: CAAGTTCAGTACACACCTCAAGGGGATTCTGATGAT...TTCTATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | ATAGGCAGAGGCTTTGCTAATTTGGGACTAGCAAAATTTCTAGTTCTTTATGGCATCATGCCCATGACGTaGGGGACAACTAAAAGAATA | + |
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Preference number: 5 (lower is better) Translates to: IGRGFANLGLAKFLVLYGIMPMT*GTTKRI Trigger: TATTCTTTTAGTTGTCCCCAACGTCATGGGCATGAT...GCCATAAAGAACTAGAAATTTTGCTAGTCCCAAATTAGCAAAGCCTCTGCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| CDS-3UTR CAA 90 bp | AATATCAGAGTTCCCAGTTTCAAATCAGACCATCAGGACTTTCCTGTATCTTACATCATGCCCATGACGTaGGGGACAACTAAAAGAATA | + |
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Preference number: 5 (lower is better) Translates to: NIRVPSFKSDHQDFPVSYIMPMT*GTTKRI Trigger: TATTCTTTTAGTTGTCCCCAACGTCATGGGCATGAT...GTAAGATACAGGAAAGTCCTGATGGTCTGATTTGAAACTGGGAACTCTGATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000155587.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCGGTAACACTGCAGTGACAGATGTTGTAAATACACATTACTACCAGATAAGGTGTGTACTGAACTaGGTATTCCTGAAGGATTTT | + |
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Preference number: 5 (lower is better) Translates to: SSGNTAVTDVVNTHYYQIRCVLN*VFLKDF Trigger: AAAATCCTTCAGGAATACCAAGTTCAGTACACACCT...TATCTGGTAGTAATGTGTATTTACAACATCTGTCACTGCAGTGTTACCGGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS-3UTR CAA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTAGACAAAAAGGAACTTaGGTATCTCCAATAGAATGC | + |
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Preference number: 5 (lower is better) Translates to: GAQLPESQSLWIQEKEMIRQKGT*VSPIEC Trigger: GCATTCTATTGGAGATACCAAAGTTCCTTTTTGTCT...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| CDS-3UTR CAA 90 bp | GGTGCTCAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTCTTGTCCTTCTGCAATaGTATAGAACAGCAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: GAQLPESQSLWIQEKEMILVLLQ*YRTANL Trigger: AAGATTTGCTGTTCTATACAATTGCAGAAGGACAAG...AATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTGAGCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| CDS-3UTR CAA 90 bp | CAATTACCTGAATCACAGTCACTCTGGATACAAGAAAAAGAGATGATTAGTGTCCGCAATCCTGTAGATTaGAGTGCTGTAATAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: QLPESQSLWIQEKEMISVRNPVD*SAVINL Trigger: CAAGTTTATTACAGCACTCAAATCTACAGGATTGCG...GACACTAATCATCTCTTTTTCTTGTATCCAGAGTGACTGTGATTCAGGTAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114510.8 |
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| CDS TCA 90 bp | TTTTTAAAAAGATCTTTGTCTAGCATGACACCATCTGACGTTGTCTaGAGAGTTAATCTTAACATATCCATACACTCTTTCAACCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: FLKRSLSSMTPSDVV*RVNLNISIHSFNLG Trigger: TCCCAGGTTGAAAGAGTGTATGGATATGTTAAGATTAACTCTTCAGACAACGTCAGATGGTGTCATGCTAGACAAAGATCTTTTTAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000114513.9 |
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| CDS CCA 72 bp | CCTTCCCCAGCTCCTGTAGGATCTCCGAGGGCGAACTaGACAGGCCGCCCGCGCCGGGGCCCTTCGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PSPAPVGSPRAN*TGRPRRGPSRG Trigger: GCCGCGCGAAGGGCCCCGGCGCGGGCGGCCTGTCCAGTTCGCCCTCGGAGATCCTACAGGAGCTGGGGAAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000114513.9 |
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| CDS GCA 72 bp | TGTCGCCCGCGGCCACCATCTCCTTGCCCTCGCTGTTaGCGAACGCGTCGGTCTCCCCCGGGCTGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CRPRPPSPCPRC*RTRRSPPGCPW Trigger: CCAAGGACAGCCCGGGGGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCGCGGGCGACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000114513.9 |
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| CDS CAA 72 bp | TTGTCGCCCGCGGCCACCATCTCCTTGCCCTCGCTGTaGCCGAACGCGTCGGTCTCCCCCGGGCTGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSPAATISLPSL*PNASVSPGLSL Trigger: CAAGGACAGCCCGGGGGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCGCGGGCGACAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000114513.9 |
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| CDS CAA 72 bp | TGTTTTATTTTATTGTCGCCCGCGGCCACCATCTCCTaGCCCTCGCTGTTGCCGAACGCGTCGGTCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: CFILLSPAATIS*PSLLPNASVSP Trigger: GGGGGAGACCGACGCGTTCGGCAACAGCGAGGGCAAGGAGATGGTGGCCGCGGGCGACAATAAAATAAAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000114513.9 |
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| CDS CCA 72 bp | CTGTTCTGGAGTCATAATCCCGCTGCTCCATGTCCATaGCTGACAGAGCAAACCTTCGGAGGGCAGACACAT | + |
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Preference number: 6 (lower is better) Translates to: LFWSHNPAAPCP*LTEQTFGGQTH Trigger: ATGTGTCTGCCCTCCGAAGGTTTGCTCTGTCAGCCATGGACATGGAGCAGCGGGATTATGACTCCAGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000156887.8 |
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| CDS GCA 72 bp | AGCAAACCTTCGGAGGGCAGACACATCTCCAGTGTATaGGGCAAACAGAAGGTTTATCACCGACTTCACCCT | + |
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Preference number: 6 (lower is better) Translates to: SKPSEGRHISSV*GKQKVYHRLHP Trigger: AGGGTGAAGTCGGTGATAAACCTTCTGTTTGCCGCATACACTGGAGATGTGTCTGCCCTCCGAAGGTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000156887.8 |
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| CDS CCA 72 bp | AACTGCCTCAGGACTGAGGACTCTTTCACCAGTAATTaGGCAGAAACCACCATTAGCCAAGGTGGCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NCLRTEDSFTSN*AETTISQGGSH Trigger: ATGGCTGCCACCTTGGCTAATGGTGGTTTCTGCCCAATTACTGGTGAAAGAGTCCTCAGTCCTGAGGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000155587.8 |
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| CDS TCA 72 bp | ACCACCATTAGCCAAGGTGGCAGCCATCACACTTGCTaGTTCACATGTCACTTCAATAGAGCACAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TTISQGGSHHTC*FTCHFNRAQLE Trigger: TTCCAGCTGTGCTCTATTGAAGTGACATGTGAATCAGCAAGTGTGATGGCTGCCACCTTGGCTAATGGTGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000155587.8 |
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| CDS GCA 72 bp | GCCACAAGAATGCATCAAGCTCAGTGTATTCCGAACTaGCTCAGGACTGAGGACTCTTTCACCAGTAATTGG | + |
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Preference number: 6 (lower is better) Translates to: ATRMHQAQCIPN*LRTEDSFTSNW Trigger: CCAATTACTGGTGAAAGAGTCCTCAGTCCTGAGGCAGTTCGGAATACACTGAGCTTGATGCATTCTTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000155587.8 |
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| CDS CCA 72 bp | AAACATCATGGTGTCCAAAGTGTAGTGCTTCATCCATaGGGGTATTATTCCACCTGTCCTTGGGGAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: KHHGVQSVVLHP*GYYSTCPWGKG Trigger: ACCCTTTCCCCAAGGACAGGTGGAATAATACCCCCATGGATGAAGCACTACACTTTGGACACCATGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114512.8 ENSMUST00000114513.9 ENSMUST00000156887.8 |
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| CDS CAA 72 bp | GGACAACTAAAAGAATACCCCCAGCAACTCCAGATTTaGCAGGAAGACCAACCTTGTACCATGATATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GQLKEYPQQLQI*QEDQPCTMICL Trigger: AAGGCATATCATGGTACAAGGTTGGTCTTCCTGCAAAATCTGGAGTTGCTGGGGGTATTCTTTTAGTTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129107.2 ENSMUST00000156887.8 |
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| CDS GCA 72 bp | ATGTACATACTCAGTTCCCAGGTCATTAACAGCAATTaGATATTTCAGGGGTTTTACACAGGACTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: MYILSSQVINSN*IFQGFYTGLKT Trigger: TGTCTTCAGTCCTGTGTAAAACCCCTGAAATATGCAATTGCTGTTAATGACCTGGGAACTGAGTATGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 |
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| CDS TCA 72 bp | AGATCTTTGTCTAGCATGACACCATCTGACGTTGTCTaGAGAGTTAATCTTAACATATCCATACACTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RSLSSMTPSDVV*RVNLNISIHSF Trigger: GAAAGAGTGTATGGATATGTTAAGATTAACTCTTCAGACAACGTCAGATGGTGTCATGCTAGACAAAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114510.8 ENSMUST00000114513.9 |
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| CDS CAA 72 bp | GGATTATGTGGTTTATCATCTTCATTCAAAAAGAGTTaGTTGAATCTTAATCCACTTGGCTCCTTCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: GLCGLSSSFKKS*LNLNPLGSFPT Trigger: TGTTGGGAAGGAGCCAAGTGGATTAAGATTCAACAAACTCTTTTTGAATGAAGATGATAAACCACATAATCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114510.8 ENSMUST00000114512.8 ENSMUST00000114513.9 |
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