Pregenerated sensors for GLA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031266Ensembl transcript IDs: ENSMUST00000033621.8, ENSMUST00000153024.2, ENSMUST00000239113.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATCCGGCTGCCTCTGCCTCCTAAGTGCTAGGATTAAAGGCGTGTaGTACCACTGCTGGGCACTTCAGGCATTAAGGGAGTCTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SSGCLCLLSARIKGV*YHCWALQALRESGE Trigger: CTCCCCAGACTCCCTTAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAGGAGGCAGAGGCAGCCGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR GCA 90 bp | GAACTCTGTAGACCAGGCTGGCCTCGAATTCAGAACTCATCCGGCTaGCTCTGCCTCCTAAGTGCTAGGATTAAAGGCGTGTGCTACCAC | + |
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Preference number: 1 (lower is better) Translates to: ELCRPGWPRIQNSSG*LCLLSARIKGVCYH Trigger: GTGGTAGCACACGCCTTTAATCCTAGCACTTAGGAGGCAGAGGCAGCCGGATGAGTTCTGAATTCGAGGCCAGCCTGGTCTACAGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 90 bp | CTCTGCCTCCTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTaGGCACTTCAGGCATTAAGGGAGTCTGGGGAGCATGCTTCAATA | + |
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Preference number: 1 (lower is better) Translates to: LCLLSARIKGVCYHC*ALQALRESGEHASI Trigger: TATTGAAGCATGCTCCCCAGACTCCCTTAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAGGAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 90 bp | CTAGTTCCTCCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGTGCTaGAATTGGAGGCATGGAACACCATCATACTGGCTTTGTGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LVPPLGFSGLILTKC*NWRHGTPSYWLCVK Trigger: TTTTACACAAAGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGAACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR TCA 90 bp | AGTTTGTTTCCAGCCAGGCTTGCACTTTGTAGTCCAGGCTGGCCTTaGATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: SLFPARLALCSPGWP*IILAIASLVLGLRT Trigger: TGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGCCAGCCTGGACTACAAAGTGCAAGCCTGGCTGGAAACAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR TCA 90 bp | TCTAGAGAACCAGAAGAGGGCATCAGATCTCATTGCAGATTATTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCATGACCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SREPEEGIRSHCRLL*ATMWLLGFELMTFG Trigger: TCCAAAGGTCATGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAATAATCTGCAATGAGATCTGATGCCCTCTTCTGGTTCTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 90 bp | AAAAAGCACTTGTTCTTCTGGCTTCCTGGGCACCCGGTATGTATGTaGACCTCATACATACAGGCAAAACTCTTGAACCACATACATCTA | + |
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Preference number: 1 (lower is better) Translates to: KKHLFFWLPGHPVCM*TSYIQAKLLNHIHL Trigger: TAGATGTATGTGGTTCAAGAGTTTTGCCTGTATGTATGAGGTCCACATACATACCGGGTGCCCAGGAAGCCAGAAGAACAAGTGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGGCTGAGGCAGGCGGATTTCTAAATTCAAGGCCATCCTGGTCTACAGAGGTTCTTCTGGCTTCCTaGGCACCCGGTATGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: LEAEAGGFLNSRPSWSTEVLLAS*APGMYV Trigger: CACATACATACCGGGTGCCCAGGAAGCCAGAAGAAC...CTCTGTAGACCAGGATGGCCTTGAATTTAGAAATCCGCCTGCCTCAGCCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGTGTCCCTAGTTCCTCCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGAGCTTGCTGGCTCAGTaGTTAAGGGCACTTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LEVSLVPPLGFSGLILTKSLLAQ*LRALVK Trigger: TTTGACAAGTGCCCTTAATCACTGAGCCAGCAAGCT...CTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGAACTAGGGACACTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAGTGTCCCTAGTTCCTCCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGCACCCGGTATGTATGTaGACCTCATACATACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LEVSLVPPLGFSGLILTKHPVCM*TSYIQA Trigger: TGCCTGTATGTATGAGGTCCACATACATACCGGGTG...CTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGAACTAGGGACACTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTGGGCACTTCAGGCATTAAAGCACTTGTTCTTCTaGCTTCCTGGGCACCCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSARIKGVCYHCWALQALKHLFF*LPGHPV Trigger: TACCGGGTGCCCAGGAAGCCAGAAGAACAAGTGCTT...TAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTGGGCACTTCAGGCATTATCCCCTGGGTTTCTCTaGCCTTATCCTCACCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSARIKGVCYHCWALQALSPGFL*PYPHQV Trigger: CACTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGA...TAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTAGTCCAGGCTGGCCTTaGATTATACTTGCCATTGCC | + |
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Preference number: 2 (lower is better) Translates to: PYPHQVLELEAWNTIILASPGWP*IILAIA Trigger: GGCAATGGCAAGTATAATTCAAGGCCAGCCTGGACT...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTAGCTTGCTGGCTCAGTaGTTAAGGGCACTTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PYPHQVLELEAWNTIILASLLAQ*LRALVK Trigger: TTTGACAAGTGCCCTTAATCACTGAGCCAGCAAGCT...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CAA 90 bp | TCCTCCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGTGCTGGAATaGGAGGCATGGAACACCATCATACTGGCTTTGTGTAAAATAACA | + |
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Preference number: 2 (lower is better) Translates to: SSPGFLWPYPHQVLE*EAWNTIILALCKIT Trigger: TGTTATTTTACACAAAGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGAAGCACTTGTTCTTCTaGCTTCCTGGGCACCCGGTA | + |
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Preference number: 2 (lower is better) Translates to: GSLGSMLQYTSLVLDCWKKHLFF*LPGHPV Trigger: TACCGGGTGCCCAGGAAGCCAGAAGAACAAGTGCTT...CTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGAATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTAACAGCCAGGGCTATATaGAGAAACCCTGTCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ALNYTCHCLPSTGIKDMLTARAI*RNPVLG Trigger: CCCCAAGACAGGGTTTCTCCATATAGCCCTGGCTGT...TAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAACAGCCAGGGCTATATaGAGAAACCCTGTCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RESGEHASIYIPCFRLLETARAI*RNPVLG Trigger: CCCCAAGACAGGGTTTCTCCATATAGCCCTGGCTGT...TTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGAATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTATTTAAATCCTGGTTCTaGGTGCTAGAGCTTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ALNYTCHCLPSTGIKDMLFKSWF*VLELAG Trigger: GCCAGCAAGCTCTAGCACCCAGAACCAGGATTTAAA...TAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCCTTTAAATCCTGGTTCTaGGTGCTAGAGCTTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LGSMLQYTSLVLDCWKCPFKSWF*VLELAG Trigger: GCCAGCAAGCTCTAGCACCCAGAACCAGGATTTAAA...GGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATCACCCGGTATGTATGTaGACCTCATACATACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHHPVCM*TSYIQA Trigger: TGCCTGTATGTATGAGGTCCACATACATACCGGGTG...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTTTATTTGTGTCTGGCTaGTTTAGCTTTAAATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PYPHQVLELEAWNTIILALFVSG*FSFKSW Trigger: CCAGGATTTAAAGCTAAACCAGCCAGACACAAATAA...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGTTATTTGTGTCTGGCTaGTTTAGCTTTAAATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKLFVSG*FSFKSW Trigger: CCAGGATTTAAAGCTAAACCAGCCAGACACAAATAA...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCCGGGCAGGAAATAGTTTaGTTTGTAGTAAAACGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LGSMLQYTSLVLDCWKCPGQEIV*FVVKRD Trigger: GTCCCGTTTTACTACAAACCAAACTATTTCCTGCCC...GGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGAATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTATTCAAAAGCCTATGTTaGAAAGCAGCTTTTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ALNYTCHCLPSTGIKDMLFKSLC*KAAFKG Trigger: GCCCTTAAAAGCTGCTTTTCAACATAGGCTTTTGAA...TAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAAATCAACCAGTGTACGGAAGCATCTGCTACAGCCTACCGGTTACAAGTTAGGGCAGGAAATAGTTTaGTTTGTAGTAAAACGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LKSTSVRKHLLQPTGYKLGQEIV*FVVKRD Trigger: GTCCCGTTTTACTACAAACCAAACTATTTCCTGCCC...TAACTTGTAACCGGTAGGCTGTAGCAGATGCTTCCGTACACTGGTTGATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR TCA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATTTCAAAAGCCTATGTTaGAAAGCAGCTTTTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHFKSLC*KAAFKG Trigger: GCCCTTAAAAGCTGCTTTTCAACATAGGCTTTTGAA...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAATTCAGAACTCATCCGGCTGCCTCTGCCTCCCCGAATCCCCCAGTTaGTCACCAGGACAGTTCATC | + |
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Preference number: 3 (lower is better) Translates to: LCRPGWPRIQNSSGCLCLPESPS*SPGQFI Trigger: GATGAACTGTCCTGGTGACAAACTGGGGGATTCGGG...GAGGCAGAGGCAGCCGGATGAGTTCTGAATTCGAGGCCAGCCTGGTCTACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR GCA 72 bp | GGCTGGCCTCGAATTCAGAACTCATCCGGCTGCCTCTaGCTCCTAAGTGCTAGGATTAAAGGCGTGTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: GWPRIQNSSGCL*LLSARIKGVCY Trigger: GTAGCACACGCCTTTAATCCTAGCACTTAGGAGGCAGAGGCAGCCGGATGAGTTCTGAATTCGAGGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR GCA 72 bp | TGCCTCTGCCTCCTAAGTGCTAGGATTAAAGGCGTGTaGTACCACTGCTGGGCACTTCAGGCATTAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: CLCLLSARIKGV*YHCWALQALRE Trigger: CTCCCTTAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAGGAGGCAGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 72 bp | GTTGGAAGTGTCCCTAGTTCCTCCCCTGGGTTTCTCTaGCCTTATCCTCACCAAGTGCTGGAATTGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VGSVPSSSPGFL*PYPHQVLELEA Trigger: TGCCTCCAATTCCAGCACTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGAACTAGGGACACTTCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR TCA 72 bp | CCAGCCAGGCTTGCACTTTGTAGTCCAGGCTGGCCTTaGATTATACTTGCCATTGCCTCCCTAGTACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PARLALCSPGWP*IILAIASLVLG Trigger: TCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGCCAGCCTGGACTACAAAGTGCAAGCCTGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 72 bp | CCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGTGCTaGAATTGGAGGCATGGAACACCATCATACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PLGFSGLILTKC*NWRHGTPSYWL Trigger: AAGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGGCCAGAGAAACCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 72 bp | CTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTaGGCACTTCAGGCATTAAGGGAGTCTGGGGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LSARIKGVCYHC*ALQALRESGEH Trigger: ATGCTCCCCAGACTCCCTTAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCCCCCGAATCCCCCAGTTaGTCACCAGGACAGTTCATC | + |
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Preference number: 3 (lower is better) Translates to: LGSMLQYTSLVLDCWKCPPESPS*SPGQFI Trigger: GATGAACTGTCCTGGTGACAAACTGGGGGATTCGGG...GGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTGGGCACTTCAGGCATTACCTTGTTTTAGATTGTaGGAAGTGTCCCTAGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LSARIKGVCYHCWALQALPCFRL*EVSLVP Trigger: AGGAACTAGGGACACTTCCAACAATCTAAAACAAGG...TAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR TCA 72 bp | CTGCATTTCTTAGCTCTAGGGGATAACCTGGGCATATaGGTTTGTTTCCAGCCAGGCTTGCACTTTGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: LHFLALGDNLGI*VCFQPGLHFVV Trigger: GACTACAAAGTGCAAGCCTGGCTGGAAACAAACTCATATGCCCAGGTTATCCCCTAGAGCTAAGAAATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR TCA 72 bp | CAGATTATTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCATGACCTTTGGAAGAGCAGTCAATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QIIVSHHVVAGI*THDLWKSSQSS Trigger: AGAGGATTGACTGCTCTTCCAAAGGTCATGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAATAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR CCA 72 bp | TGGCCTTATCCTCACCAAGTGCTGGAATTGGAGGCATaGAACACCATCATACTGGCTTTGTGTAAAATAACA | + |
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Preference number: 3 (lower is better) Translates to: WPYPHQVLELEA*NTIILALCKIT Trigger: TGTTATTTTACACAAAGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCCTGTAGCCAATCACCATaGGTAAATACAGGTAATCCT | + |
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Preference number: 3 (lower is better) Translates to: LGSMLQYTSLVLDCWKCPCSQSP*VNTGNP Trigger: AGGATTACCTGTATTTACCAATGGTGATTGGCTACA...GGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATCATCTAAAGGGTTTTTaGTTGCTTTTGACTTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHHLKGF*LLLTWL Trigger: CAGCCAAGTCAAAAGCAACAAAAAACCCTTTAGATG...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAACATCTAAAGGGTTTTTaGTTGCTTTTGACTTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RESGEHASIYIPCFRLLEHLKGF*LLLTWL Trigger: CAGCCAAGTCAAAAGCAACAAAAAACCCTTTAGATG...TTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGATACAGGCAAAACTCTaGAACCACATACATCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: GSLGSMLQYTSLVLDCWKIQAKL*NHIHLK Trigger: CTTTAGATGTATGTGGTTCAAGAGTTTTGCCTGTAT...CTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAATGTAGCCAATCACCATaGGTAAATACAGGTAATCCT | + |
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Preference number: 3 (lower is better) Translates to: RESGEHASIYIPCFRLLECSQSP*VNTGNP Trigger: AGGATTACCTGTATTTACCAATGGTGATTGGCTACA...TTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAATTCAGAACTCATCCGGCTGCCTCTGCCTCTTGCCCAAGGGGTCTTaGTTGATGGCAATTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LCRPGWPRIQNSSGCLCLLPKGS*LMAITS Trigger: GGATGTAATTGCCATCAACCAAGACCCCTTGGGCAA...GAGGCAGAGGCAGCCGGATGAGTTCTGAATTCGAGGCCAGCCTGGTCTACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCTGAGGCAGGCGGATTTCTAAATTCAAGGCCATCCTGGTCTACAGAGCAGCCCAGGCTAGGTTaGAGAGTGGCCGTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEAEAGGFLNSRPSWSTEQPRLG*RVAVPK Trigger: TTTGGGAACGGCCACTCTCCAACCTAGCCTGGGCTG...CTCTGTAGACCAGGATGGCCTTGAATTTAGAAATCCGCCTGCCTCAGCCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGCGTTGGGGATCTGCCTaGAGCCTGCCCTTTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKRWGSA*SLPFES Trigger: GGATTCAAAGGGCAGGCTTCAGGCAGATCCCCAACG...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGTGTCCCTAGTTCCTCCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGGGTCCACCAATCTCCTaGAGGTTTCTCACAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LEVSLVPPLGFSGLILTKGPPIS*RFLTAT Trigger: TGTGGCTGTGAGAAACCTGCAGGAGATTGGTGGACC...CTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGAACTAGGGACACTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTCAGCCCAGGCTAGGTTaGAGAGTGGCCGTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PYPHQVLELEAWNTIILAQPRLG*RVAVPK Trigger: TTTGGGAACGGCCACTCTCCAACCTAGCCTGGGCTG...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | AAGCACTTGTTCTTCTGGCTTCCTGGGCACCCGGTATGTATGTGGACCTCATACGGTCCACCAATCTCCTaGAGGTTTCTCACAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KHLFFWLPGHPVCMWTSYGPPIS*RFLTAT Trigger: TGTGGCTGTGAGAAACCTGCAGGAGATTGGTGGACC...GTATGAGGTCCACATACATACCGGGTGCCCAGGAAGCCAGAAGAACAAGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCTGAGGCAGGCGGATTTCTAAATTCAAGGCCATCCTGGTCTACAGAGGCATCAGGCTCTTCTTaGCAGTCAAGGTTGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LEAEAGGFLNSRPSWSTEASGSS*QSRLHM Trigger: CATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGC...CTCTGTAGACCAGGATGGCCTTGAATTTAGAAATCCGCCTGCCTCAGCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGCATTGTCCAATGCTCTaGCCCCAAGAATGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKHCPML*PQECSR Trigger: TCTGGAGCATTCTTGGGGTCAGAGCATTGGACAATG...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGCCTGCTGGTCCCAACTaGGGCCAAAGTTGCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLGSMLQYTSLVLDCWKPAGPN*GQSCRS Trigger: TGATCGGCAACTTTGGCCTCAGTTGGGACCAGCAGG...CTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGAGCAGAGCTTTGGCTTaGGAGCTGATTTGTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKSRALA*ELICRR Trigger: TCTGCGACAAATCAGCTCTCAAGCCAAAGCTCTGCT...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTAAAACGGGACATAGAACTCTGCTGGGTCATTCCAGCTaGCTGGTCCAGCGACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGNSLVCSKTGHRTLLGHSS*LVQRLQ Trigger: TTGAAGTCGCTGGACCAGGCAGCTGGAATGACCCAG...CAGAGTTCTATGTCCCGTTTTACTACAAACCAAACTATTTCCTGCCCCTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATCGTTGGGGATCTGCCTaGAGCCTGCCCTTTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHRWGSA*SLPFES Trigger: GGATTCAAAGGGCAGGCTTCAGGCAGATCCCCAACG...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAACCTGCTGGTCCCAACTaGGGCCAAAGTTGCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RESGEHASIYIPCFRLLEPAGPN*GQSCRS Trigger: TGATCGGCAACTTTGGCCTCAGTTGGGACCAGCAGG...TTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGTGTGGTTTTCCTTTCTaGAACAGTAGCCCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKCGFPF*NSSPAC Trigger: GCAAGCAGGGCTACTGTTTCAGAAAGGAAAACCACA...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTATGAAACGTTCCCAATaGAGCCAGCCCATAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PYPHQVLELEAWNTIILAMKRSQ*SQPIVG Trigger: TCCTACTATGGGCTGGCTGCATTGGGAACGTTTCAT...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGACCGAAACAAAACAGTaGCTGAGGGGTTTACTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKTETKQ*LRGLLE Trigger: CTCGAGTAAACCCCTCAGGCACTGTTTTGTTTCGGT...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTAAAACGGGACATAGAACTCTGCTTTGGCTTGAGAGCTaGTTTGTCGCAGATCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAGNSLVCSKTGHRTLLWLES*FVADRW Trigger: CCAACGATCTGCGACAAATCAGCTCTCAAGCCAAAG...CAGAGTTCTATGTCCCGTTTTACTACAAACCAAACTATTTCCTGCCCCTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGTGTCCCTAGTTCCTCCCCTGGGTTTCTCTGGCCTTATCCTCACCAAGTCCAACAGTCATCTATaGAGAGATAGTCATAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVSLVPPLGFSGLILTKSNSHL*RDSHNL Trigger: CAGGTTATGACTATCTCTGCATAGATGACTGTTGGA...CTTGGTGAGGATAAGGCCAGAGAAACCCAGGGGAGGAACTAGGGACACTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | AAGCACTTGTTCTTCTGGCTTCCTGGGCACCCGGTATGTATGTGGACCTCATACCTAGCTTCAATCCTTTaGTGTGGACGTAATTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KHLFFWLPGHPVCMWTSYLASIL*CGRNLR Trigger: TCGCAAATTACGTCCACAGCAAAGGATTGAAGCTAG...GTATGAGGTCCACATACATACCGGGTGCCCAGGAAGCCAGAAGAACAAGTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTGGGCACTTCAGGCATTAATCTGCATGAACAGTTaGTCACTTATGCAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSARIKGVCYHCWALQALICMNS*SLMQAS Trigger: TGATGCCTGCATAAGTGAGCAACTGTTCATGCAGAT...TAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCCACTCCCGGGGAAACCTaGACAGGTTTTATTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGSMLQYTSLVLDCWKCPTPGET*TGFIPN Trigger: GTTGGGAATAAAACCTGTGCAGGTTTCCCCGGGAGT...GGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATCCAGCCGCGTATCTCTaGTCAAAAGCTTCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHPAAYL*SKASWP Trigger: TGGCCATGAAGCTTTTGAGCAGAGATACGCGGCTGG...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGAATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTAGCATCAGGCTCTTCTTaGCAGTCAAGGTTGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ALNYTCHCLPSTGIKDMLASGSS*QSRLHM Trigger: CATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGC...TAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTGGTTTTCCTTTCTaGAACAGTAGCCCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLGSMLQYTSLVLDCWKCGFPF*NSSPAC Trigger: GCAAGCAGGGCTACTGTTTCAGAAAGGAAAACCACA...CTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGCTAGGATTAAAGGCGTGTGCTACCACTGCTGGGCACTTCAGGCATTATCCAACAGTCATCTATaGAGAGATAGTCATAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSARIKGVCYHCWALQALSNSHL*RDSHNL Trigger: CAGGTTATGACTATCTCTGCATAGATGACTGTTGGA...TAATGCCTGAAGTGCCCAGCAGTGGTAGCACACGCCTTTAATCCTAGCACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTGAATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTAGCTGTGGACGTAATTTaGGAGGTGTTTGATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALNYTCHCLPSTGIKDMLAVDVI*EVFDPT Trigger: AGTGGGATCAAACACCTCGCAAATTACGTCCACAGC...TAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGATACTTTATTTTTAGAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTCTGGGTCATTCCAGCTaGCTGGTCCAGCGACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWDTLFLEGGAGNSLVCSLGHSS*LVQRLQ Trigger: TTGAAGTCGCTGGACCAGGCAGCTGGAATGACCCAG...ACTACAAACCAAACTATTTCCTGCCCCTCCCTCTAAAAATAAAGTATCCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCATTGTCCAATGCTCTaGCCCCAAGAATGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGSMLQYTSLVLDCWKCHCPML*PQECSR Trigger: TCTGGAGCATTCTTGGGGTCAGAGCATTGGACAATG...ACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTAGCAGAGCTTTGGCTTaGGAGCTGATTTGTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGSMLQYTSLVLDCWKCSRALA*ELICRR Trigger: TCTGCGACAAATCAGCTCTCAAGCCAAAGCTCTGCT...ACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | ATAAACAGCTGCTTCAGGGTTGTGAAGGTTAAAATCAACCAGTGTACGGAAGCAATGAAACGTTCCCAATaGAGCCAGCCCATAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: INSCFRVVKVKINQCTEAMKRSQ*SQPIVG Trigger: TCCTACTATGGGCTGGCTGCATTGGGAACGTTTCAT...TGCTTCCGTACACTGGTTGATTTTAACCTTCACAACCCTGAAGCAGCTGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTGAATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTAATGAGCTCTGCCATCTaGATGAACAGTTGCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ALNYTCHCLPSTGIKDMLMSSAI*MNSCSL Trigger: AAGTGAGCAACTGTTCATGCAGATGGCAGAGCTCAT...TAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATTCAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATGCTGTGGACGTAATTTaGGAGGTGTTTGATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHAVDVI*EVFDPT Trigger: AGTGGGATCAAACACCTCGCAAATTACGTCCACAGC...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAATCAACCAGTGTACGGAAGCATCTGCTACAGCCTACCGGTTACAAGTTAACCGAAACAAAACAGTaGCTGAGGGGTTTACTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSTSVRKHLLQPTGYKLTETKQ*LRGLLE Trigger: CTCGAGTAAACCCCTCAGGCACTGTTTTGTTTCGGT...TAACTTGTAACCGGTAGGCTGTAGCAGATGCTTCCGTACACTGGTTGATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| 3UTR CAA 72 bp | GAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTaGGAAGTGTCCCTAGTTCCTCCCCTGGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EHASIYIPCFRL*EVSLVPPLGFS Trigger: AGAGAAACCCAGGGGAGGAACTAGGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCCCTAGCTTCAATCCTTTaGTGTGGACGTAATTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGSMLQYTSLVLDCWKCPLASIL*CGRNLR Trigger: TCGCAAATTACGTCCACAGCAAAGGATTGAAGCTAG...GGGACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAATCAACCAGTGTACGGAAGCATCTGCTACAGCCTACCGGTTACAAGTTAGGGTCTCAAATAAAGTaGCCACTCACAGGAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSTSVRKHLLQPTGYKLGSQIK*PLTGVY Trigger: GTATACTCCTGTGAGTGGCCACTTTATTTGAGACCC...TAACTTGTAACCGGTAGGCTGTAGCAGATGCTTCCGTACACTGGTTGATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAATCAACCAGTGTACGGAAGCATCTGCTACAGCCTACCGGTTACAAGTTAACTACACTGTCACAGTaGCAACCATCAAATTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSTSVRKHLLQPTGYKLTTLSQ*QPSNFS Trigger: GCTAAAATTTGATGGTTGTCACTGTGACAGTGTAGT...TAACTTGTAACCGGTAGGCTGTAGCAGATGCTTCCGTACACTGGTTGATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGATACTTTATTTTTAGAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTGGGTCTCAAATAAAGTaGCCACTCACAGGAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LWDTLFLEGGAGNSLVCSGSQIK*PLTGVY Trigger: GTATACTCCTGTGAGTGGCCACTTTATTTGAGACCC...ACTACAAACCAAACTATTTCCTGCCCCTCCCTCTAAAAATAAAGTATCCCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGATACTTTATTTTTAGAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTATCTGCATGAACAGTTaGTCACTTATGCAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LWDTLFLEGGAGNSLVCSICMNS*SLMQAS Trigger: TGATGCCTGCATAAGTGAGCAACTGTTCATGCAGAT...ACTACAAACCAAACTATTTCCTGCCCCTCCCTCTAAAAATAAAGTATCCCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| 3UTR CAA 72 bp | CCACCCCCTGAGGTAGAGACTTGTATTTCAAGGGATTaGAGGCCAGTAATAAGCTTTAAATATGTTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPEVETCISRD*RPVISFKYVLL Trigger: AAGCAAAACATATTTAAAGCTTATTACTGGCCTCAAATCCCTTGAAATACAAGTCTCTACCTCAGGGGGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGATACTTTATTTTTAGAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTTCCCAAACCTCAATGTaGTTTTCCTTTCTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LWDTLFLEGGAGNSLVCSSQTSM*FSFLKQ Trigger: CTGTTTCAGAAAGGAAAACCACATTGAGGTTTGGGA...ACTACAAACCAAACTATTTCCTGCCCCTCCCTCTAAAAATAAAGTATCCCAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS CCA 90 bp | AGGGGAGCGGCCATGATAGCCCAGAGGGCCATCTGTGTCACCTGCTaGTCCCAACTGAGGCCAAAGTTGCCGATCACTAACATGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGAAMIAQRAICVTC*SQLRPKLPITNMSG Trigger: CCCAGACATGTTAGTGATCGGCAACTTTGGCCTCAGTTGGGACCAGCAGGTGACACAGATGGCCCTCTGGGCTATCATGGCCGCTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS TCA 90 bp | TTTGCGAGGTGTTTGATCCCACTAGGAAAGCGTTGGGGATCTGCCTaGAGCCTGCCCTTTGAATCCCTCTCGGGAGCCATCCAACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FARCLIPLGKRWGSA*SLPFESLSGAIQQS Trigger: TGACTGTTGGATGGCTCCCGAGAGGGATTCAAAGGGCAGGCTTCAGGCAGATCCCCAACGCTTTCCTAGTGGGATCAAACACCTCGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
||
| CDS GCA 90 bp | GCCTGCCCTTTGAATCCCTCTCGGGAGCCATCCAACAGTCATCTATaGAGAGATAGTCATAACCTGCATCCCGCCAGCCATCAGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: ACPLNPSREPSNSHL*RDSHNLHPASHQRP Trigger: TGGTCTCTGATGGCTGGCGGGATGCAGGTTATGACTATCTCTGCATAGATGACTGTTGGATGGCTCCCGAGAGGGATTCAAAGGGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTCCTGAAGCCTGCCCTTaGAATCCCTCTCGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PYPHQVLELEAWNTIILAPEACP*NPSREP Trigger: TGGCTCCCGAGAGGGATTCAAAGGGCAGGCTTCAGG...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS TCA 90 bp | GATCCCACTAGGAAAGCGTTGGGGATCTGCCTGAAGCCTGCCCTTTaGATCCCTCTCGGGAGCCATCCAACAGTCATCTATGCAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: DPTRKALGICLKPAL*IPLGSHPTVIYAEI Trigger: TATCTCTGCATAGATGACTGTTGGATGGCTCCCGAGAGGGATTCAAAGGGCAGGCTTCAGGCAGATCCCCAACGCTTTCCTAGTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
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| CDS GCA 90 bp | CTCGGGAGCCATCCAACAGTCATCTATGCAGAGATAGTCATAACCTaGATCCCGCCAGCCATCAGAGACCATGAGCTCTGCCATCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGSHPTVIYAEIVIT*IPPAIRDHELCHLH Trigger: ATGCAGATGGCAGAGCTCATGGTCTCTGATGGCTGGCGGGATGCAGGTTATGACTATCTCTGCATAGATGACTGTTGGATGGCTCCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
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| CDS CCA 90 bp | ATCTGCATGAACAGTTGCTCACTTATGCAGGCATCAGGCTCTTCTTaGCAGTCAAGGTTGCACATGAAACGTTCCCAATGCAGCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ICMNSCSLMQASGSS*QSRLHMKRSQCSQP Trigger: GGGCTGGCTGCATTGGGAACGTTTCATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGCCTGCATAAGTGAGCAACTGTTCATGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CCA 90 bp | AGCCAGGATTGCAGGCTAGTCCTCTACCCAGGGAAGAAATCTGGATaGTATAAGGACAAGGTCCACCAATCTCCTGCAGGTTTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SQDCRLVLYPGKKSG*YKDKVHQSPAGFSQ Trigger: CTGTGAGAAACCTGCAGGAGATTGGTGGACCTTGTCCTTATACCATCCAGATTTCTTCCCTGGGTAGAGGACTAGCCTGCAATCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTGGCATCAGGCTCTTCTaGGCAGTCAAGGTTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PYPHQVLELEAWNTIILAGIRLF*AVKVAH Trigger: ATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGCC...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | CCTTATCCTCACCAAGTGCTGGAATTGGAGGCATGGAACACCATCATACTGGCTAAGCAGAGCTTTGGCTaGAGAGCTGATTTGTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PYPHQVLELEAWNTIILAKQSFG*RADLSQ Trigger: CTGCGACAAATCAGCTCTCAAGCCAAAGCTCTGCTT...AGCCAGTATGATGGTGTTCCATGCCTCCAATTCCAGCACTTGGTGAGGATAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | AAGCACTTGTTCTTCTGGCTTCCTGGGCACCCGGTATGTATGTGGACCTCATACCCCAAGGGGTCTTGGTaGATGGCAATTACATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KHLFFWLPGHPVCMWTSYPKGSW*MAITSL Trigger: TAAGGATGTAATTGCCATCAACCAAGACCCCTTGGG...GTATGAGGTCCACATACATACCGGGTGCCCAGGAAGCCAGAAGAACAAGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | CTAGTACTGGGATTAAGGACATGCTACCACATCCAGTCTGTCACCTGGAGGAAGCTTGCCCAAGGGGTCTaGGTTGATGGCAATTACATC | + |
|
Preference number: 5 (lower is better) Translates to: LVLGLRTCYHIQSVTWRKLAQGV*VDGNYI Trigger: GATGTAATTGCCATCAACCAAGACCCCTTGGGCAAG...CTTCCTCCAGGTGACAGACTGGATGTGGTAGCATGTCCTTAATCCCAGTACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | AGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGTGTCCTGAAGCCTGCCCTTaGAATCCCTCTCGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGSMLQYTSLVLDCWKCPEACP*NPSREP Trigger: TGGCTCCCGAGAGGGATTCAAAGGGCAGGCTTCAGG...ACACTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | TTAAAATCAACCAGTGTACGGAAGCATCTGCTACAGCCTACCGGTTACAAGTTAGGCATCAGGCTCTTCTaGGCAGTCAAGGTTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LKSTSVRKHLLQPTGYKLGIRLF*AVKVAH Trigger: ATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGCC...TAACTTGTAACCGGTAGGCTGTAGCAGATGCTTCCGTACACTGGTTGATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATATTTGTCGCAGATCGTaGGACATGAGTAGGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHICRRS*DMSRGA Trigger: CGCTCCCCTACTCATGTCCAACGATCTGCGACAAAT...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
||
| CDS GCA 90 bp | TATGAAAGGGTCTCAAATAAAGTGGCCACTCACAGGAGTATACAATaGTTCGGCCTGTCCTGTTCAAGGCCAAGGCCATGTACTTATAAC | + |
|
Preference number: 5 (lower is better) Translates to: YERVSNKVATHRSIQ*FGLSCSRPRPCTYN Trigger: GTTATAAGTACATGGCCTTGGCCTTGAACAGGACAGGCCGAAGCATTGTATACTCCTGTGAGTGGCCACTTTATTTGAGACCCTTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | GGGAGTCTGGGGAGCATGCTTCAATATACATCCCTTGTTTTAGATTGTTGGAAGCAACTGAGGCCAAAGTaGCCGATCACTAACATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLGSMLQYTSLVLDCWKQLRPK*PITNMS Trigger: AGACATGTTAGTGATCGGCAACTTTGGCCTCAGTTG...CTTCCAACAATCTAAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | ATAAACAGCTGCTTCAGGGTTGTGAAGGTTAAAATCAACCAGTGTACGGAAGCACTTGCCCAAGGGGTCTaGGTTGATGGCAATTACATC | + |
|
Preference number: 5 (lower is better) Translates to: INSCFRVVKVKINQCTEALAQGV*VDGNYI Trigger: GATGTAATTGCCATCAACCAAGACCCCTTGGGCAAG...TGCTTCCGTACACTGGTTGATTTTAACCTTCACAACCCTGAAGCAGCTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | CTTTGGGATACTTTATTTTTAGAGGGAGGGGCAGGAAATAGTTTGGTTTGTAGTATTTGTCGCAGATCGTaGGACATGAGTAGGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LWDTLFLEGGAGNSLVCSICRRS*DMSRGA Trigger: CGCTCCCCTACTCATGTCCAACGATCTGCGACAAAT...ACTACAAACCAAACTATTTCCTGCCCCTCCCTCTAAAAATAAAGTATCCCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS-3UTR CAA 90 bp | AATTATACTTGCCATTGCCTCCCTAGTACTGGGATTAAGGACATGCTACCACATCCCAAGGGGTCTTGGTaGATGGCAATTACATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NYTCHCLPSTGIKDMLPHPKGSW*MAITSL Trigger: TAAGGATGTAATTGCCATCAACCAAGACCCCTTGGG...ATGTGGTAGCATGTCCTTAATCCCAGTACTAGGGAGGCAATGGCAAGTATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS TCA 72 bp | CCCAGAGGGCCATCTGTGTCACCTGCTGGTCCCAACTaGGGCCAAAGTTGCCGATCACTAACATGTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRGPSVSPAGPN*GQSCRSLTCLG Trigger: ACCCAGACATGTTAGTGATCGGCAACTTTGGCCTCAGTTGGGACCAGCAGGTGACACAGATGGCCCTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CCA 72 bp | GCCATGATAGCCCAGAGGGCCATCTGTGTCACCTGCTaGTCCCAACTGAGGCCAAAGTTGCCGATCACTAAC | + |
|
Preference number: 6 (lower is better) Translates to: AMIAQRAICVTC*SQLRPKLPITN Trigger: GTTAGTGATCGGCAACTTTGGCCTCAGTTGGGACCAGCAGGTGACACAGATGGCCCTCTGGGCTATCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS GCA 72 bp | TCTTGGCAGTCAAGGTTGCACATGAAACGTTCCCAATaGAGCCAGCCCATAGTAGGAGTCCGCGCCAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWQSRLHMKRSQ*SQPIVGVRAKP Trigger: TGGCTTGGCGCGGACTCCTACTATGGGCTGGCTGCATTGGGAACGTTTCATGTGCAACCTTGACTGCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS GCA 72 bp | TCCCGCCAGCCATCAGAGACCATGAGCTCTGCCATCTaGATGAACAGTTGCTCACTTATGCAGGCATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRQPSETMSSAI*MNSCSLMQASG Trigger: GCCTGATGCCTGCATAAGTGAGCAACTGTTCATGCAGATGGCAGAGCTCATGGTCTCTGATGGCTGGCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CCA 72 bp | CCTGCAGGTTTCTCACAGCCACAGCCCAGGCTAGGTTaGAGAGTGGCCGTTCCCAAACCTCAATGTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PAGFSQPQPRLG*RVAVPKPQCGF Trigger: AAAACCACATTGAGGTTTGGGAACGGCCACTCTCCAACCTAGCCTGGGCTGTGGCTGTGAGAAACCTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 72 bp | TGCAGCCAGCCCATAGTAGGAGTCCGCGCCAAGCCATaGTCCAATGCTCTGACCCCAAGAATGCTCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: CSQPIVGVRAKP*SNALTPRMLQK Trigger: TTTCTGGAGCATTCTTGGGGTCAGAGCATTGGACAATGGCTTGGCGCGGACTCCTACTATGGGCTGGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 90 bp | CGTTCCCAATGCAGCCAGCCCATAGTAGGAGTCCGCGCCAAGCCATaGTCCAATGCTCTGACCCCAAGAATGCTCCAGAAAACTAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSQCSQPIVGVRAKP*SNALTPRMLQKTKA Trigger: GGCTTTAGTTTTCTGGAGCATTCTTGGGGTCAGAGCATTGGACAATGGCTTGGCGCGGACTCCTACTATGGGCTGGCTGCATTGGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS TCA 72 bp | AGGAAAGCGTTGGGGATCTGCCTGAAGCCTGCCCTTTaGATCCCTCTCGGGAGCCATCCAACAGTCATCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RKALGICLKPAL*IPLGSHPTVIY Trigger: ATAGATGACTGTTGGATGGCTCCCGAGAGGGATTCAAAGGGCAGGCTTCAGGCAGATCCCCAACGCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
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| CDS TCA 72 bp | GTGGCCGTTCCCAAACCTCAATGTGGTTTTCCTTTCTaGAACAGTAGCCCTGCTTGCCCAAGGGGTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VAVPKPQCGFPF*NSSPACPRGLG Trigger: ACCAAGACCCCTTGGGCAAGCAGGGCTACTGTTTCAGAAAGGAAAACCACATTGAGGTTTGGGAACGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 90 bp | CATCTGCATGAACAGTTGCTCACTTATGCAGGCATCAGGCTCTTCTaGGCAGTCAAGGTTGCACATGAAACGTTCCCAATGCAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLHEQLLTYAGIRLF*AVKVAHETFPMQPA Trigger: GGCTGGCTGCATTGGGAACGTTTCATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGCCTGCATAAGTGAGCAACTGTTCATGCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS GCA 72 bp | TCAGAGACCATGAGCTCTGCCATCTGCATGAACAGTTaGTCACTTATGCAGGCATCAGGCTCTTCTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SETMSSAICMNS*SLMQASGSSWQ Trigger: CTGCCAAGAAGAGCCTGATGCCTGCATAAGTGAGCAACTGTTCATGCAGATGGCAGAGCTCATGGTCTCTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS GCA 72 bp | CATCCAACAGTCATCTATGCAGAGATAGTCATAACCTaGATCCCGCCAGCCATCAGAGACCATGAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HPTVIYAEIVIT*IPPAIRDHELC Trigger: GCAGAGCTCATGGTCTCTGATGGCTGGCGGGATGCAGGTTATGACTATCTCTGCATAGATGACTGTTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
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| CDS GCA 72 bp | TTGAATCCCTCTCGGGAGCCATCCAACAGTCATCTATaGAGAGATAGTCATAACCTGCATCCCGCCAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LNPSREPSNSHL*RDSHNLHPASH Trigger: ATGGCTGGCGGGATGCAGGTTATGACTATCTCTGCATAGATGACTGTTGGATGGCTCCCGAGAGGGATTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033621.8 ENSMUST00000153024.2 ENSMUST00000239113.2 |
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| CDS CCA 72 bp | TGCAGGCTAGTCCTCTACCCAGGGAAGAAATCTGGATaGTATAAGGACAAGGTCCACCAATCTCCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRLVLYPGKKSG*YKDKVHQSPAG Trigger: ACCTGCAGGAGATTGGTGGACCTTGTCCTTATACCATCCAGATTTCTTCCCTGGGTAGAGGACTAGCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS GCA 72 bp | GTCTCAAATAAAGTGGCCACTCACAGGAGTATACAATaGTTCGGCCTGTCCTGTTCAAGGCCAAGGCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: VSNKVATHRSIQ*FGLSCSRPRPC Trigger: ACATGGCCTTGGCCTTGAACAGGACAGGCCGAAGCATTGTATACTCCTGTGAGTGGCCACTTTATTTGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 72 bp | ATCAGAGACCATGAGCTCTGCCATCTGCATGAACAGTaGCTCACTTATGCAGGCATCAGGCTCTTCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IRDHELCHLHEQ*LTYAGIRLFLA Trigger: TGCCAAGAAGAGCCTGATGCCTGCATAAGTGAGCAACTGTTCATGCAGATGGCAGAGCTCATGGTCTCTGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CCA 72 bp | AACAGTTGCTCACTTATGCAGGCATCAGGCTCTTCTTaGCAGTCAAGGTTGCACATGAAACGTTCCCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: NSCSLMQASGSS*QSRLHMKRSQC Trigger: GCATTGGGAACGTTTCATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGCCTGCATAAGTGAGCAACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 72 bp | GAACAGTTGCTCACTTATGCAGGCATCAGGCTCTTCTaGGCAGTCAAGGTTGCACATGAAACGTTCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: EQLLTYAGIRLF*AVKVAHETFPM Trigger: CATTGGGAACGTTTCATGTGCAACCTTGACTGCCAAGAAGAGCCTGATGCCTGCATAAGTGAGCAACTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 90 bp | GTGGTTTTCCTTTCTGAAACAGTAGCCCTGCTTGCCCAAGGGGTCTaGGTTGATGGCAATTACATCCTTATTCTGAAGCAGAGCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVFLSETVALLAQGV*VDGNYILILKQSFG Trigger: GCCAAAGCTCTGCTTCAGAATAAGGATGTAATTGCCATCAACCAAGACCCCTTGGGCAAGCAGGGCTACTGTTTCAGAAAGGAAAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 72 bp | CTTTCTGAAACAGTAGCCCTGCTTGCCCAAGGGGTCTaGGTTGATGGCAATTACATCCTTATTCTGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSETVALLAQGV*VDGNYILILKQ Trigger: CTGCTTCAGAATAAGGATGTAATTGCCATCAACCAAGACCCCTTGGGCAAGCAGGGCTACTGTTTCAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CAA 72 bp | GGCAATTACATCCTTATTCTGAAGCAGAGCTTTGGCTaGAGAGCTGATTTGTCGCAGATCGTTGGACATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GNYILILKQSFG*RADLSQIVGHE Trigger: CTCATGTCCAACGATCTGCGACAAATCAGCTCTCAAGCCAAAGCTCTGCTTCAGAATAAGGATGTAATTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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| CDS CCA 72 bp | TCCAATGATTGCAGTAATATTGGATATCTGTATAATTaGGCTTATGAAAGGGTCTCAAATAAAGTGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SNDCSNIGYLYN*AYERVSNKVAT Trigger: AGTGGCCACTTTATTTGAGACCCTTTCATAAGCCCAATTATACAGATATCCAATATTACTGCAATCATTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033621.8 ENSMUST00000239113.2 |
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