Pregenerated sensors for GHR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055737Ensembl transcript IDs: ENSMUST00000069451.11, ENSMUST00000110697.9, ENSMUST00000110698.9, ENSMUST00000161561.8, ENSMUST00000161770.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCCAATCACACCACATCACTTCTACTTCTCTTACATGTAGCTGTGTaGCTTGAATGGAAATTTGTCGAAGAAAGCACTTCTTCCATTATT | + |
Preference number: 1 (lower is better) Translates to: ANHTTSLLLLLHVAV*LEWKFVEESTSSII Trigger: AATAATGGAAGAAGTGCTTTCTTCGACAAATTTCCATTCAAGCCACACAGCTACATGTAAGAGAAGTAGAAGTGATGTGGTGTGATTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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3UTR-3UTR GCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTTGGTTTAAGCGTTTGTaGCCAGCCTTTCCCTTGCCA | + |
Preference number: 2 (lower is better) Translates to: SITKLRPTVQTITATIQSWFKRL*PAFPLP Trigger: TGGCAAGGGAAAGGCTGGGCACAAACGCTTAAACCA...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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3UTR CAA 90 bp | AGGTTTGATGGCAAGGTTTCTGTTACCTGTTTAATTACTTCTGAGTaGTGCTTTGTGAGTGGGAAGTCATTTATTCTGTCCCTTCTCCCT | + |
Preference number: 2 (lower is better) Translates to: RFDGKVSVTCLITSE*CFVSGKSFILSLLP Trigger: AGGGAGAAGGGACAGAATAAATGACTTCCCACTCACAAAGCACAACTCAGAAGTAATTAAACAGGTAACAGAAACCTTGCCATCAAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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3UTR-3UTR GCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATTGGTTTAAGCGTTTGTaGCCAGCCTTTCCCTTGCCA | + |
Preference number: 2 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYWFKRL*PAFPLP Trigger: TGGCAAGGGAAAGGCTGGGCACAAACGCTTAAACCA...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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3UTR-3UTR GCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTCCATATCCACTCTCATaGTCTCCCAACACAGATTTA | + |
Preference number: 2 (lower is better) Translates to: TFIDQNMKPSLHCSCYILPYPLS*SPNTDL Trigger: TAAATCTGTGTTGGGAGAGCATGAGAGTGGATATGG...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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3UTR-3UTR CCA 90 bp | TTAGAATACTATAAAAACCAAGCTGGGTTTGACAGACTGCACTGTGGAGATGTGGCTGTGTGGCTTGAATaGAAATTTGTCGAAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: LEYYKNQAGFDRLHCGDVAVWLE*KFVEES Trigger: GCTTTCTTCGACAAATTTCCATTCAAGCCACACAGC...CACATCTCCACAGTGCAGTCTGTCAAACCCAGCTTGGTTTTTATAGTATTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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3UTR-3UTR TCA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTTCTGTCCCTTCTCCCTaGATTAAAAATTTGTGTCTG | + |
Preference number: 2 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSSVPSP*IKNLCL Trigger: CAGACACAAATTTTTAATTCAGGGAGAAGGGACAGA...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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3UTR-3UTR GCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGACCATATCCACTCTCATaGTCTCCCAACACAGATTTA | + |
Preference number: 2 (lower is better) Translates to: FIDQNMKPSLHCSCYILRPYPLS*SPNTDL Trigger: TAAATCTGTGTTGGGAGAGCATGAGAGTGGATATGG...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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3UTR-3UTR TCA 90 bp | TTAGAATACTATAAAAACCAAGCTGGGTTTGACAGACTGCACTGTGGAGATGTGTTTCTTTACGTTCATTaGCCAAAACATGAAACCCTC | + |
Preference number: 2 (lower is better) Translates to: LEYYKNQAGFDRLHCGDVFLYVH*PKHETL Trigger: GAGGGTTTCATGTTTTGGTCAATGAACGTAAAGAAA...CACATCTCCACAGTGCAGTCTGTCAAACCCAGCTTGGTTTTTATAGTATTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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3UTR-3UTR GCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATGCCTGTGCTATAATCTaGATTCAATTTCCTGAACTG | + |
Preference number: 2 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYACAII*IQFPEL Trigger: CAGTTCAGGAAATTGAATGCAGATTATAGCACAGGC...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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3UTR TCA 72 bp | TTAAATATAGACTGCAGAACACAACTAGTTAAACGGTaGATAACGGCTTGTGTGGCCAGCAAAGTACCAAAA | + |
Preference number: 3 (lower is better) Translates to: LNIDCRTQLVKR*ITACVASKVPK Trigger: TTTTGGTACTTTGCTGGCCACACAAGCCGTTATTCACCGTTTAACTAGTTGTGTTCTGCAGTCTATATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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3UTR GCA 72 bp | ATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTaGTACATCCTTAGATGGATTGTTCTGAACTACAAT | + |
Preference number: 3 (lower is better) Translates to: IDQNMKPSLHCS*YILRWIVLNYN Trigger: ATTGTAGTTCAGAACAATCCATCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTAAGACGTGGCTTCCATaGGAGGGGCCACAGCGATGC | + |
Preference number: 4 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSKTWLP*EGPQRC Trigger: GCATCGCTGTGGCCCCTCGCATGGAAGCCACGTCTT...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR GCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTAAGACGTGGCTTCCATaGGAGGGGCCACAGCGATGC | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPKTWLP*EGPQRC Trigger: GCATCGCTGTGGCCCCTCGCATGGAAGCCACGTCTT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTAAAATGTGCTGCTGGTaGCTGCCAGTGCCAAGGTTA | + |
Preference number: 4 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSKMCCW*LPVPRL Trigger: TAACCTTGGCACTGGCAGTCACCAGCAGCACATTTT...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR GCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTGCATTGGGTGGTGGTTaGCAACTCACTTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILALGGG*QLTWMS Trigger: AGACATCCAAGTGAGTTGGCAACCACCACCCAATGC...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTTCCCTTCAGAACATCTaGATTGGGTGGTGGTTGCCA | + |
Preference number: 4 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSSLQNI*IGWWLP Trigger: TGGCAACCACCACCCAATGCAGATGTTCTGAAGGGA...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTGGTTGCCAACTCACTTaGATGTCTCCACGAATCCCG | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPGCQLT*MSPRIP Trigger: CGGGATTCGTGGAGACATCCAAGTGAGTTGGCAACC...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTGCTGTCTCAGACATCTaGGCAGTAGTGGTAAGGCTT | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILAVSDI*AVVVRL Trigger: AAGCCTTACCACTACTGCCCAGATGTCTGAGACAGC...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAACCGTGGTGTAGTCTaGGACAGACATCTCAGCATC | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILNRGVV*DRHLSI Trigger: GATGCTGAGATGTCTGTCCCAGACTACACCACGGTT...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTAAAATGTGCTGCTGGTaGCTGCCAGTGCCAAGGTTA | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPKMCCW*LPVPRL Trigger: TAACCTTGGCACTGGCAGTCACCAGCAGCACATTTT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | CTGCTAACTTTACCCCATCTGGATACTGGATTTCATACATGTGAGACTTTTCCTTTAGTAAAGTCCAGTTaGGGCCAATGGGTGGATCAG | + |
Preference number: 4 (lower is better) Translates to: LLTLPHLDTGFHTCETFPLVKSS*GQWVDQ Trigger: CTGATCCACCCATTGGCCTCAACTGGACTTTACTAA...AGGAAAAGTCTCACATGTATGAAATCCAGTATCCAGATGGGGTAAAGTTAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR GCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGAGCATTGGGTGGTGGTTaGCAACTCACTTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRALGGG*QLTWMS Trigger: AGACATCCAAGTGAGTTGGCAACCACCACCCAATGC...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTAGAATACTATAAAAACCAAGCTGGGTTTGACAGACTGCACTGTGGAGATGTGAAGGACTACACCACCTaGTGGTGTAATGTCGCTTAC | + |
Preference number: 4 (lower is better) Translates to: LEYYKNQAGFDRLHCGDVKDYTT*WCNVAY Trigger: GTAAGCGACATTACACCAGCAGGTGGTGTAGTCCTT...CACATCTCCACAGTGCAGTCTGTCAAACCCAGCTTGGTTTTTATAGTATTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR GCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTCAAAGGCAAAGCAGTTaGGTTGAGTATAAGGCCCCT | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILQRQSS*VEYKAP Trigger: AGGGGCCTTATACTCAACGCAACTGCTTTGCCTTTG...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTTCAGAACATCTGCATTaGGTGGTGGTTGCCAACTCA | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILSEHLH*VVVANS Trigger: TGAGTTGGCAACCACCACCCAATGCAGATGTTCTGA...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTCAGGGTCGTAACAGCTaGTACGCCCAGAATCATCAT | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPQGRNS*YAQNHH Trigger: ATGATGATTCTGGGCGTACCAGCTGTTACGACCCTG...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTCAGGGTCGTAACAGCTaGTACGCCCAGAATCATCAT | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSQGRNS*YAQNHH Trigger: ATGATGATTCTGGGCGTACCAGCTGTTACGACCCTG...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTAACCGTGGTGTAGTCTaGGACAGACATCTCAGCATC | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPNRGVV*DRHLSI Trigger: GATGCTGAGATGTCTGTCCCAGACTACACCACGGTT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | CTGCTAACTTTACCCCATCTGGATACTGGATTTCATACATGTGAGACTTTTCCTTTCTGTCCAGTAGCATaGAAATGTCTCCAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: LLTLPHLDTGFHTCETFPFCPVA*KCLQFR Trigger: CCTGAACTGGAGACATTTTCATGCTACTGGACAGAA...AGGAAAAGTCTCACATGTATGAAATCCAGTATCCAGATGGGGTAAAGTTAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR TCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTCCAACTTCCCTTCCTTaGGAAGATCTGGATCAATCC | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPPTSLP*EDLDQS Trigger: GGATTGATCCAGATCTTCTCAAGGAAGGGAAGTTGG...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTAAGGACTACACCACCTaGTGGTGTAATGTCGCTTAC | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPKDYTT*WCNVAY Trigger: GTAAGCGACATTACACCAGCAGGTGGTGTAGTCCTT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTATCTGGAGCAATATCTaGTGTCTCAGACATCTGGGC | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSIWSNI*CLRHLG Trigger: GCCCAGATGTCTGAGACAGCAGATATTGCTCCAGAT...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTCAAAGGCAAAGCAGTTaGGTTGAGTATAAGGCCCCT | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPQRQSS*VEYKAP Trigger: AGGGGCCTTATACTCAACGCAACTGCTTTGCCTTTG...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATGTTCAGTTGGTCTGTaGTCACATAACCACACGAGG | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRCSVGL*SHNHTR Trigger: CCTCGTGTGGTTATGTGAGCACAGACCAACTGAACA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTTTTGCCAAGAGTAGCTaGTGTAGCCTCACTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPFAKSS*CSLTSR Trigger: TCTGGAAGTGAGGCTACACCAGCTACTCTTGGCAAA...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTGATTCTTTGCAGAACTaGGGAAGCTTTGCCAAGAGT | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILDSLQN*GSFAKS Trigger: ACTCTTGGCAAAGCTTCCCCAGTTCTGCAAAGAATC...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTATCTGCATTGGGTGGTaGTTGCCAACTCACTTGGAT | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPICIGW*LPTHLD Trigger: ATCCAAGTGAGTTGGCAACCACCACCCAATGCAGAT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | TTAGAATACTATAAAAACCAAGCTGGGTTTGACAGACTGCACTGTGGAGATGTGCATGAATGCCTAAGATaGTGTTCACCTCCTCCAACT | + |
Preference number: 4 (lower is better) Translates to: LEYYKNQAGFDRLHCGDVHECLR*CSPPPT Trigger: AGTTGGAGGAGGTGAACACCATCTTAGGCATTCATG...CACATCTCCACAGTGCAGTCTGTCAAACCCAGCTTGGTTTTTATAGTATTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTCATGAATGCCTAAGATaGTGTTCACCTCCTCCAACT | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILHECLR*CSPPPT Trigger: AGTTGGAGGAGGTGAACACCATCTTAGGCATTCATG...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGACATCTCAGCATCTaGAGCAATATCTGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILRHLSI*SNICCL Trigger: GAGACAGCAGATATTGCTCCAGATGCTGAGATGTCT...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATTCTGTCCAGTAGCATaGAAATGTCTCCAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRFCPVA*KCLQFR Trigger: CCTGAACTGGAGACATTTTCATGCTACTGGACAGAA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTTCCAATATGTTCGTCTaGGGAAATATTACACGGAGG | + |
Preference number: 4 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSSNMFV*GNITRR Trigger: CCTCCGTGTAATATTTCCTCAGACGAACATATTGGA...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR GCA 90 bp | CTGCTAACTTTACCCCATCTGGATACTGGATTTCATACATGTGAGACTTTTCCTCTTGGATTGATTCTTTaGAGAACTGGGGAAGCTTTG | + |
Preference number: 4 (lower is better) Translates to: LLTLPHLDTGFHTCETFPLGLIL*RTGEAL Trigger: CAAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAG...AGGAAAAGTCTCACATGTATGAAATCCAGTATCCAGATGGGGTAAAGTTAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR GCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGTAGGCACTGTTCATaGTGTAATTTTCTTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILSRHCS*CNFLGR Trigger: CCTGCCAAGAAAATTACAGCATGAACAGTGCCTACT...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGAGATTCTTTGCAGAACTaGGGAAGCTTTGCCAAGAGT | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRDSLQN*GSFAKS Trigger: ACTCTTGGCAAAGCTTCCCCAGTTCTGCAAAGAATC...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTAGACATCTCAGCATCTaGAGCAATATCTGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPRHLSI*SNICCL Trigger: GAGACAGCAGATATTGCTCCAGATGCTGAGATGTCT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
||
CDS-3UTR TCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATTCCTGGGTCCATTCATaGGCAATTCTTGCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYSWVHS*AILAAC Trigger: ACAAGCTGCAAGAATTGCTCATGAATGGACCCAGGA...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTCTATTTCGTCAACAGTaGAACATTTTTGGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILLFRQQ*NIFGPA Trigger: TGCTGGACCAAAAATGTTTCACTGTTGACGAAATAG...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
||
CDS-3UTR TCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATTTAGTAAAGTCCAGTTaGGGCCAATGGGTGGATCAG | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYLVKSS*GQWVDQ Trigger: CTGATCCACCCATTGGCCTCAACTGGACTTTACTAA...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTTCCAATATGTTCGTCTaGGGAAATATTACACGGAGG | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPSNMFV*GNITRR Trigger: CCTCCGTGTAATATTTCCTCAGACGAACATATTGGA...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
||
CDS-3UTR TCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTCAATATCTAGCTCAATaGACTCGACCCAGGAATCAT | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSQYLAQ*TRPRNH Trigger: ATGATTCCTGGGTCGAGTTCATTGAGCTAGATATTG...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
||
CDS-3UTR TCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTCAATATCTAGCTCAATaGACTCGACCCAGGAATCAT | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPQYLAQ*TRPRNH Trigger: ATGATTCCTGGGTCGAGTTCATTGAGCTAGATATTG...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
||
CDS-3UTR TCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATCCAAGGATACCAGCTaGTTTCTCATGATCATTGCT | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRSKDTS*FLMIIA Trigger: AGCAATGATCATGAGAAATCAGCTGGTATCCTTGGA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTTCCAAGGATACCAGCTaGTTTCTCATGATCATTGCT | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPSKDTS*FLMIIA Trigger: AGCAATGATCATGAGAAATCAGCTGGTATCCTTGGA...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTCTTGGATTGATTCTTTaGAGAACTGGGGAAGCTTTG | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPLGLIL*RTGEAL Trigger: CAAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAG...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTAGTAGGCACTGTTCATaGTGTAATTTTCTTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSSRHCS*CNFLGR Trigger: CCTGCCAAGAAAATTACAGCATGAACAGTGCCTACT...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATATCTGGAGCAATATCTaGTGTCTCAGACATCTGGGC | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYIWSNI*CLRHLG Trigger: GCCCAGATGTCTGAGACAGCAGATATTGCTCCAGAT...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATTGTTCAGTTGGTCTGTaGTCACATAACCACACGAGG | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYCSVGL*SHNHTR Trigger: CCTCGTGTGGTTATGTGAGCACAGACCAACTGAACA...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTCATCACACATGTCACTaGTATGGAAATCAGTATCCA | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILHHTCH*YGNQYP Trigger: TGGATACTGATTTCCATACCAGTGACATGTGTGATG...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATGACTACACCACCTGCTaGTGTAATGTCGCTTACTTG | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYDYTTC*CNVAYL Trigger: CAAGTAAGCGACATTACACCAGCAGGTGGTGTAGTC...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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3UTR CAA 72 bp | GGCAAGGTTTCTGTTACCTGTTTAATTACTTCTGAGTaGTGCTTTGTGAGTGGGAAGTCATTTATTCTGTCC | + |
Preference number: 4 (lower is better) Translates to: GKVSVTCLITSE*CFVSGKSFILS Trigger: GGACAGAATAAATGACTTCCCACTCACAAAGCACAACTCAGAAGTAATTAAACAGGTAACAGAAACCTTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR TCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTCTATTTCGTCAACAGTaGAACATTTTTGGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSLFRQQ*NIFGPA Trigger: TGCTGGACCAAAAATGTTTCACTGTTGACGAAATAG...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATTCTTCAGATTCTTCTaGTCAAGGCACAAGAGATCA | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRFFRFF*SRHKRS Trigger: TGATCTCTTGTGCCTTGATCAGAAGAATCTGAAGAA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTCACATGTCACTGGTATaGAAATCAGTATCCAAAATG | + |
Preference number: 4 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSHMSLV*KSVSKM Trigger: CATTTTGGATACTGATTTCCATACCAGTGACATGTG...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGACTCTTGGTTAAAGCTTaGTTTTATACAAGACGTGGC | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRLLVKA*FYTRRG Trigger: GCCACGTCTTGTATAAAACCAAGCTTTAACCAAGAG...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTCTCTTGGTTAAAGCTTaGTTTTATACAAGACGTGGC | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPLLVKA*FYTRRG Trigger: GCCACGTCTTGTATAAAACCAAGCTTTAACCAAGAG...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATTTATCCATTCTCAATaGGTACACTGGACAGTATGT | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRFIHSQ*VHWTVC Trigger: ACATACTGTCCAGTGTACTCATTGAGAATGGATAAA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGAGATATCTTCTTCACATaGTTCCAATATGTTCGTCTG | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRDIFFT*FQYVRL Trigger: CAGACGAACATATTGGAAGCATGTGAAGAAGATATC...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | CTGCTAACTTTACCCCATCTGGATACTGGATTTCATACATGTGAGACTTTTCCTATTTCTCATGATCATTaGTTAGAAGTCTGTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: LLTLPHLDTGFHTCETFPISHDH*LEVCLC Trigger: ACACAGACAGACTTCTAAGCAATGATCATGAGAAAT...AGGAAAAGTCTCACATGTATGAAATCCAGTATCCAGATGGGGTAAAGTTAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CCA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTACAGTGAAACATTTTTaGTCCAGCAAATCACCATTT | + |
Preference number: 4 (lower is better) Translates to: TFIDQNMKPSLHCSCYILTVKHF*SSKSPF Trigger: AAATGGTGATTTGCTGGACCAAAAATGTTTCACTGT...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTAAGAACCATGGAAACTaGATATCTTCTTCACATGCT | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSKNHGN*ISSSHA Trigger: AGCATGTGAAGAAGATATCCAGTTTCCATGGTTCTT...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGACACATGTCACTGGTATaGAAATCAGTATCCAAAATG | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRHMSLV*KSVSKM Trigger: CATTTTGGATACTGATTTCCATACCAGTGACATGTG...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR TCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATTTCTTCAGATTCTTCTaGTCAAGGCACAAGAGATCA | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYFFRFF*SRHKRS Trigger: TGATCTCTTGTGCCTTGATCAGAAGAATCTGAAGAA...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTATTTCTCATGATCATTaGTTAGAAGTCTGTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: SITKLRPTVQTITATIQSISHDH*LEVCLC Trigger: ACACAGACAGACTTCTAAGCAATGATCATGAGAAAT...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATTCCTTGAGAAGATCTaGATCAATCCCTTTAATCTT | + |
Preference number: 4 (lower is better) Translates to: FIDQNMKPSLHCSCYILRFLEKI*INPFNL Trigger: AAGATTAAAGGGATTGATCCAGATCTTCTCAAGGAA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CCA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTTTCCTTGAGAAGATCTaGATCAATCCCTTTAATCTT | + |
Preference number: 4 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPFLEKI*INPFNL Trigger: AAGATTAAAGGGATTGATCCAGATCTTCTCAAGGAA...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR GCA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATGATATCTTCTTCACATaGTTCCAATATGTTCGTCTG | + |
Preference number: 4 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYDIFFT*FQYVRL Trigger: CAGACGAACATATTGGAAGCATGTGAAGAAGATATC...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 90 bp | GCAGGGCGTGGCCACCTCCCGCTGGGTATTGCCTTGGGCTATCCCTaGCTTAATCTTTTGGCCTGGGGAAAGGACTACACCACCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: AGRGHLPLGIALGYP*LNLLAWGKDYTTCW Trigger: CCAGCAGGTGGTGTAGTCCTTTCCCCAGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGTGGCCACGCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 90 bp | CCGCTGGGTATTGCCTTGGGCTATCCCTGCCTTAATCTTTTGGCCTaGGGAAAGGACTACACCACCTGCTGGTGTAATGTCGCTTACTTG | + |
Preference number: 5 (lower is better) Translates to: PLGIALGYPCLNLLA*GKDYTTCWCNVAYL Trigger: CAAGTAAGCGACATTACACCAGCAGGTGGTGTAGTCCTTTCCCCAGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 90 bp | CACGGTGTGAACCGTGGTGTAGTCTGGGACAGACATCTCAGCATCTaGAGCAATATCTGCTGTCTCAGACATCTGGGCAGTAGTGGTAAG | + |
Preference number: 5 (lower is better) Translates to: HGVNRGVVWDRHLSI*SNICCLRHLGSSGK Trigger: CTTACCACTACTGCCCAGATGTCTGAGACAGCAGATATTGCTCCAGATGCTGAGATGTCTGTCCCAGACTACACCACGGTTCACACCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 90 bp | TATAAGGCCCCTTGGAGACTGCACGGTGTGAACCGTGGTGTAGTCTaGGACAGACATCTCAGCATCTGGAGCAATATCTGCTGTCTCAGA | + |
Preference number: 5 (lower is better) Translates to: YKAPWRLHGVNRGVV*DRHLSIWSNICCLR Trigger: TCTGAGACAGCAGATATTGCTCCAGATGCTGAGATGTCTGTCCCAGACTACACCACGGTTCACACCGTGCAGTCTCCAAGGGGCCTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 90 bp | TTTGTCAGGCAAAGGCAAAGCAGTTGCGTTGAGTATAAGGCCCCTTaGAGACTGCACGGTGTGAACCGTGGTGTAGTCTGGGACAGACAT | + |
Preference number: 5 (lower is better) Translates to: FVRQRQSSCVEYKAP*RLHGVNRGVVWDRH Trigger: ATGTCTGTCCCAGACTACACCACGGTTCACACCGTGCAGTCTCCAAGGGGCCTTATACTCAACGCAACTGCTTTGCCTTTGCCTGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 90 bp | CGAGGCTTTCCAGAAGAACTTGTCCCCAGGCTTGGATTGATTCTTTaGAGAACTGGGGAAGCTTTGCCAAGAGTAGCTGGTGTAGCCTCA | + |
Preference number: 5 (lower is better) Translates to: RGFPEELVPRLGLIL*RTGEALPRVAGVAS Trigger: TGAGGCTACACCAGCTACTCTTGGCAAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAGCCTGGGGACAAGTTCTTCTGGAAAGCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CCA 90 bp | TGGATTGATTCTTTGCAGAACTGGGGAAGCTTTGCCAAGAGTAGCTaGTGTAGCCTCACTTCCAGAAAATGTGCTGCTGGTGACTGCCAG | + |
Preference number: 5 (lower is better) Translates to: WIDSLQNWGSFAKSS*CSLTSRKCAAGDCQ Trigger: CTGGCAGTCACCAGCAGCACATTTTCTGGAAGTGAGGCTACACCAGCTACTCTTGGCAAAGCTTCCCCAGTTCTGCAAAGAATCAATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTACCTCCCGCTGGGTATaGCCTTGGGCTATCCCTGCC | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSTSRWV*PWAIPA Trigger: GGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGT...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS TCA 90 bp | TGGTGTAATGTCGCTTACTTGGGCATAAAAGTCAATGTTTGCCAGTaGTGTGGGATTACTCATCGGTGTAGAGGCGAGTTGGTGGGTTGC | + |
Preference number: 5 (lower is better) Translates to: WCNVAYLGIKVNVCQ*CGITHRCRGELVGC Trigger: GCAACCCACCAACTCGCCTCTACACCGATGAGTAATCCCACATCACTGGCAAACATTGACTTTTATGCCCAAGTAAGCGACATTACACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 90 bp | TCCAGAATTATCCATCCCTTCAGAACATCTGCATTGGGTGGTGGTTaGCAACTCACTTGGATGTCTCCACGAATCCCGGTCAAACTAATG | + |
Preference number: 5 (lower is better) Translates to: SRIIHPFRTSALGGG*QLTWMSPRIPVKLM Trigger: CATTAGTTTGACCGGGATTCGTGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGATAATTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CCA 90 bp | ATACTCCAGAATTATCCATCCCTTCAGAACATCTGCATTGGGTGGTaGTTGCCAACTCACTTGGATGTCTCCACGAATCCCGGTCAAACT | + |
Preference number: 5 (lower is better) Translates to: ILQNYPSLQNICIGW*LPTHLDVSTNPGQT Trigger: AGTTTGACCGGGATTCGTGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGATAATTCTGGAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CCA 90 bp | TTCATACTCCAGAATTATCCATCCCTTCAGAACATCTGCATTGGGTaGTGGTTGCCAACTCACTTGGATGTCTCCACGAATCCCGGTCAA | + |
Preference number: 5 (lower is better) Translates to: FILQNYPSLQNICIG*WLPTHLDVSTNPGQ Trigger: TTGACCGGGATTCGTGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGATAATTCTGGAGTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CCA 90 bp | CACTGGTATGGAAATCAGTATCCAAAATGTCAGGGTCGTAACAGCTaGTACGCCCAGAATCATCATCCTTTGCTCCAAGGATACCAGCTG | + |
Preference number: 5 (lower is better) Translates to: HWYGNQYPKCQGRNS*YAQNHHPLLQGYQL Trigger: CAGCTGGTATCCTTGGAGCAAAGGATGATGATTCTGGGCGTACCAGCTGTTACGACCCTGACATTTTGGATACTGATTTCCATACCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 90 bp | GGTAAGGCTTTCTGTGGTGATGTAAATGTCCTCTTGGTTAAAGCTTaGTTTTATACAAGACGTGGCTTCCATGCGAGGGGCCACAGCGAT | + |
Preference number: 5 (lower is better) Translates to: GKAFCGDVNVLLVKA*FYTRRGFHARGHSD Trigger: ATCGCTGTGGCCCCTCGCATGGAAGCCACGTCTTGTATAAAACCAAGCTTTAACCAAGAGGACATTTACATCACCACAGAAAGCCTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATACCTCCCGCTGGGTATaGCCTTGGGCTATCCCTGCC | + |
Preference number: 5 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYTSRWV*PWAIPA Trigger: GGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGT...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 90 bp | GGTGATACAGGTGGTTGTCAATCTCTTGATGTGGGTGCTGAGAATTaGACTTGGTTCCTTCTTCACATGCTTCCAATATGTTCGTCTGAG | + |
Preference number: 5 (lower is better) Translates to: GDTGGCQSLDVGAEN*TWFLLHMLPICSSE Trigger: CTCAGACGAACATATTGGAAGCATGTGAAGAAGGAACCAAGTCCAATTCTCAGCACCCACATCAAGAGATTGACAACCACCTGTATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110697.9 ENSMUST00000110698.9 |
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CDS-3UTR CAA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTTGCATTGGGTGGTGGTaGCCAACTCACTTGGATGTC | + |
Preference number: 5 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSCIGWW*PTHLDV Trigger: GACATCCAAGTGAGTTGGCAACCACCACCCAATGCA...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CAA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGACATGCTGTAATTTTCTaGGCAGGGCGTGGCCACCTC | + |
Preference number: 5 (lower is better) Translates to: FIDQNMKPSLHCSCYILRHAVIF*AGRGHL Trigger: GAGGTGGCCACGCCCTGCCAAGAAAATTACAGCATG...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS TCA 90 bp | CCAGAATCATCATCCTTTGCTCCAAGGATACCAGCTGATTTCTCATaGTCATTGCTTAGAAGTCTGTCTGTGTCAGACCCTTCAGTCTTC | + |
Preference number: 5 (lower is better) Translates to: PESSSFAPRIPADFS*SLLRSLSVSDPSVF Trigger: GAAGACTGAAGGGTCTGACACAGACAGACTTCTAAGCAATGATCATGAGAAATCAGCTGGTATCCTTGGAGCAAAGGATGATGATTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 90 bp | ATCAGGGCATTCTTTCCATTCCTGGGTCCATTCATGAGCAATTCTTaGAGCTTGTCGTTGGCTTTCCCTTTTAGCATAGTACAGCTGAAT | + |
Preference number: 5 (lower is better) Translates to: IRAFFPFLGPFMSNS*SLSLAFPFSIVQLN Trigger: ATTCAGCTGTACTATGCTAAAAGGGAAAGCCAACGACAAGCTGCAAGAATTGCTCATGAATGGACCCAGGAATGGAAAGAATGCCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS GCA 90 bp | CATCATCCTTTGCTCCAAGGATACCAGCTGATTTCTCATGATCATTaGTTAGAAGTCTGTCTGTGTCAGACCCTTCAGTCTTCTCATCCA | + |
Preference number: 5 (lower is better) Translates to: HHPLLQGYQLISHDH*LEVCLCQTLQSSHP Trigger: TGGATGAGAAGACTGAAGGGTCTGACACAGACAGACTTCTAAGCAATGATCATGAGAAATCAGCTGGTATCCTTGGAGCAAAGGATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 90 bp | CTCTTGATGTGGGTGCTGAGAATTGGACTTGGTTCCTTCTTCACATaGTTCCAATATGTTCGTCTGAGGAAATATTACACGGAGGACTTC | + |
Preference number: 5 (lower is better) Translates to: LLMWVLRIGLGSFFT*FQYVRLRKYYTEDF Trigger: GAAGTCCTCCGTGTAATATTTCCTCAGACGAACATATTGGAAGCATGTGAAGAAGGAACCAAGTCCAATTCTCAGCACCCACATCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110697.9 ENSMUST00000110698.9 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTGTCCCCAGGCTTGGATaGATTCTTTGCAGAACTGGG | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSVPRLG*ILCRTG Trigger: CCCAGTTCTGCAAAGAATCAATCCAAGCCTGGGGAC...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTTGCATTGGGTGGTGGTaGCCAACTCACTTGGATGTC | + |
Preference number: 5 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPCIGWW*PTHLDV Trigger: GACATCCAAGTGAGTTGGCAACCACCACCCAATGCA...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTCCCTGCCTTAATCTTTaGGCCTGGGGAAAGGACTAC | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSPCLNL*AWGKDY Trigger: GTAGTCCTTTCCCCAGGCCAAAAGATTAAGGCAGGG...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGACCCTGCCTTAATCTTTaGGCCTGGGGAAAGGACTAC | + |
Preference number: 5 (lower is better) Translates to: FIDQNMKPSLHCSCYILRPCLNL*AWGKDY Trigger: GTAGTCCTTTCCCCAGGCCAAAAGATTAAGGCAGGG...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS TCA 90 bp | GAATTGGACTTGGTTCCTTCTTCACATGCTTCCAATATGTTCGTCTaGGGAAATATTACACGGAGGACTTCGCTGAACTCGCTGTACTTT | + |
Preference number: 5 (lower is better) Translates to: ELDLVPSSHASNMFV*GNITRRTSLNSLYF Trigger: AAAGTACAGCGAGTTCAGCGAAGTCCTCCGTGTAATATTTCCTCAGACGAACATATTGGAAGCATGTGAAGAAGGAACCAAGTCCAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110697.9 ENSMUST00000110698.9 |
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CDS-3UTR CAA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTTTCAGAACATCTGCATaGGGTGGTGGTTGCCAACTC | + |
Preference number: 5 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPFRTSA*GGGCQL Trigger: GAGTTGGCAACCACCACCCAATGCAGATGTTCTGAA...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTTTCAGAACATCTGCATaGGGTGGTGGTTGCCAACTC | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSFRTSA*GGGCQL Trigger: GAGTTGGCAACCACCACCCAATGCAGATGTTCTGAA...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS TCA 90 bp | CTTCAGTCTTCTCATCCACATCTGCTTCATCAATATCTAGCTCAATaGACTCGACCCAGGAATCATCATTGTAGAAGTCGGGTTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: LQSSHPHLLHQYLAQ*TRPRNHHCRSRVCS Trigger: ACTACAAACCCGACTTCTACAATGATGATTCCTGGGTCGAGTTCATTGAGCTAGATATTGATGAAGCAGATGTGGATGAGAAGACTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATGTCCCCAGGCTTGGATaGATTCTTTGCAGAACTGGG | + |
Preference number: 5 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYVPRLG*ILCRTG Trigger: CCCAGTTCTGCAAAGAATCAATCCAAGCCTGGGGAC...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTAGAATACTATAAAAACCAAGCTGGGTTTGACAGACTGCACTGTGGAGATGTGTTTAGTAAAGTCCAGTaGAGGCCAATGGGTGGATCA | + |
Preference number: 5 (lower is better) Translates to: LEYYKNQAGFDRLHCGDVFSKVQ*RPMGGS Trigger: TGATCCACCCATTGGCCTCAACTGGACTTTACTAAA...CACATCTCCACAGTGCAGTCTGTCAAACCCAGCTTGGTTTTTATAGTATTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CAA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTTTTAGTAAAGTCCAGTaGAGGCCAATGGGTGGATCA | + |
Preference number: 5 (lower is better) Translates to: TFIDQNMKPSLHCSCYILFSKVQ*RPMGGS Trigger: TGATCCACCCATTGGCCTCAACTGGACTTTACTAAA...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTAGAATACTATAAAAACCAAGCTGGGTTTGACAGACTGCACTGTGGAGATGTGTCCAACTTCCCTTCCTaGAGAAGATCTGGATCAATC | + |
Preference number: 5 (lower is better) Translates to: LEYYKNQAGFDRLHCGDVSNFPS*RRSGSI Trigger: GATTGATCCAGATCTTCTCAAGGAAGGGAAGTTGGA...CACATCTCCACAGTGCAGTCTGTCAAACCCAGCTTGGTTTTTATAGTATTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CAA 90 bp | ACGTTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAAAAGTGGCTGTGGCTaGTTTTCTTCTACTGTCTGG | + |
Preference number: 5 (lower is better) Translates to: TFIDQNMKPSLHCSCYILKSGCG*FSSTVW Trigger: CCAGACAGTAGAAGAAAACAAGCCACAGCCACTTTT...AAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 90 bp | CTAATGTTTAGTAAAGTCCAGTTGAGGCCAATGGGTGGATCAGGTTaGACTATTTCGTCAACAGTGAAACATTTTTGGTCCAGCAAATCA | + |
Preference number: 5 (lower is better) Translates to: LMFSKVQLRPMGGSG*TISSTVKHFWSSKS Trigger: TGATTTGCTGGACCAAAAATGTTTCACTGTTGACGAAATAGTGCAACCTGATCCACCCATTGGCCTCAACTGGACTTTACTAAACATTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTGCTTGGATTGATTCTTaGCAGAACTGGGGAAGCTTT | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSAWIDS*QNWGSF Trigger: AAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAGC...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATCTTGCAGCTTGTCGTaGGCTTTCCCTTTTAGCATA | + |
Preference number: 5 (lower is better) Translates to: FIDQNMKPSLHCSCYILRSCSLS*AFPFSI Trigger: TATGCTAAAAGGGAAAGCCAACGACAAGCTGCAAGA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTTCCAACTTCCCTTCCTaGAGAAGATCTGGATCAATC | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSSNFPS*RRSGSI Trigger: GATTGATCCAGATCTTCTCAAGGAAGGGAAGTTGGA...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | AACACAGATTTAAAACATAGTTTTGGTTTAAGCGTTTGTGCCCAGCCTTTCCCTAAAAGTGGCTGTGGCTaGTTTTCTTCTACTGTCTGG | + |
Preference number: 5 (lower is better) Translates to: NTDLKHSFGLSVCAQPFPKSGCG*FSSTVW Trigger: CCAGACAGTAGAAGAAAACAAGCCACAGCCACTTTT...AGGGAAAGGCTGGGCACAAACGCTTAAACCAAAACTATGTTTTAAATCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTCATGATTTTGTTCAGTaGGTCTGTGCTCACATAACC | + |
Preference number: 5 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSHDFVQ*VCAHIT Trigger: GGTTATGTGAGCACAGACCAACTGAACAAAATCATG...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CAA 90 bp | CTGCTAACTTTACCCCATCTGGATACTGGATTTCATACATGTGAGACTTTTCCTCATAAAAGTCAATGTTaGCCAGTGATGTGGGATTAC | + |
Preference number: 5 (lower is better) Translates to: LLTLPHLDTGFHTCETFPHKSQC*PVMWDY Trigger: GTAATCCCACATCACTGGCAAACATTGACTTTTATG...AGGAAAAGTCTCACATGTATGAAATCCAGTATCCAGATGGGGTAAAGTTAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTCATGATTTTGTTCAGTaGGTCTGTGCTCACATAACC | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSHDFVQ*VCAHIT Trigger: GGTTATGTGAGCACAGACCAACTGAACAAAATCATG...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATGCTTGGATTGATTCTTaGCAGAACTGGGGAAGCTTT | + |
Preference number: 5 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYAWIDS*QNWGSF Trigger: AAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAGC...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTTTTATCTACCTTATCTCCCTTATTTGAGATCGGTTGTCCTGGGAGGGTAAGTAACAGTGAAACATTTTaGGTCCAGCAAATCACCATT | + |
Preference number: 5 (lower is better) Translates to: FLSTLSPLFEIGCPGRVSNSETF*VQQITI Trigger: AATGGTGATTTGCTGGACCAAAAATGTTTCACTGTT...ACTTACCCTCCCAGGACAACCGATCTCAAATAAGGGAGATAAGGTAGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069451.11 |
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CDS-3UTR CAA 90 bp | AGTATCACAAAATTAAGACCCACAGTACAGACAATCACTGCCACTATACAGTCTCATAAAAGTCAATGTTaGCCAGTGATGTGGGATTAC | + |
Preference number: 5 (lower is better) Translates to: SITKLRPTVQTITATIQSHKSQC*PVMWDY Trigger: GTAATCCCACATCACTGGCAAACATTGACTTTTATG...AGACTGTATAGTGGCAGTGATTGTCTGTACTGTGGGTCTTAATTTTGTGATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGAAACAGTGAAACATTTTaGGTCCAGCAAATCACCATT | + |
Preference number: 5 (lower is better) Translates to: FIDQNMKPSLHCSCYILRNSETF*VQQITI Trigger: AATGGTGATTTGCTGGACCAAAAATGTTTCACTGTT...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTCATTGACCAAAACATGAAACCCTCTTTACACTGTAGCTGCTACATCCTTAGATGTAATGTCGCTTACTaGGGCATAAAAGTCAATGTT | + |
Preference number: 5 (lower is better) Translates to: FIDQNMKPSLHCSCYILRCNVAY*GIKVNV Trigger: AACATTGACTTTTATGCCCAAGTAAGCGACATTACA...TCTAAGGATGTAGCAGCTACAGTGTAAAGAGGGTTTCATGTTTTGGTCAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS-3UTR CAA 90 bp | TTGCATATCCAAACTAGTTTTACCTTCTCACCTAGAGTTTTAGTTCCCAGTTATTGTAATGTCGCTTACTaGGGCATAAAAGTCAATGTT | + |
Preference number: 5 (lower is better) Translates to: LHIQTSFTFSPRVLVPSYCNVAY*GIKVNV Trigger: AACATTGACTTTTATGCCCAAGTAAGCGACATTACA...ATAACTGGGAACTAAAACTCTAGGTGAGAAGGTAAAACTAGTTTGGATATGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | TGGCAGGGCGTGGCCACCTCCCGCTGGGTATTGCCTTaGGCTATCCCTGCCTTAATCTTTTGGCCTGGGGAA | + |
Preference number: 6 (lower is better) Translates to: WQGVATSRWVLP*AIPALIFWPGE Trigger: TTCCCCAGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGTGGCCACGCCCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 72 bp | TTGGCAGGGCGTGGCCACCTCCCGCTGGGTATTGCCTaGGGCTATCCCTGCCTTAATCTTTTGGCCTGGGGA | + |
Preference number: 6 (lower is better) Translates to: LAGRGHLPLGIA*GYPCLNLLAWG Trigger: TCCCCAGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGTGGCCACGCCCTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | AGGCACTGTTCATGCTGTAATTTTCTTGGCAGGGCGTaGCCACCTCCCGCTGGGTATTGCCTTGGGCTATCC | + |
Preference number: 6 (lower is better) Translates to: RHCSCCNFLGRA*PPPAGYCLGLS Trigger: GGATAGCCCAAGGCAATACCCAGCGGGAGGTGGCCACGCCCTGCCAAGAAAATTACAGCATGAACAGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 72 bp | TTTTCTTGGCAGGGCGTGGCCACCTCCCGCTGGGTATaGCCTTGGGCTATCCCTGCCTTAATCTTTTGGCCT | + |
Preference number: 6 (lower is better) Translates to: FSWQGVATSRWV*PWAIPALIFWP Trigger: AGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGTGGCCACGCCCTGCCAAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 90 bp | CACCTCCCGCTGGGTATTGCCTTGGGCTATCCCTGCCTTAATCTTTaGGCCTGGGGAAAGGACTACACCACCTGCTGGTGTAATGTCGCT | + |
Preference number: 6 (lower is better) Translates to: HLPLGIALGYPCLNL*AWGKDYTTCWCNVA Trigger: AGCGACATTACACCAGCAGGTGGTGTAGTCCTTTCCCCAGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAGCGGGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | CCTTGGAGACTGCACGGTGTGAACCGTGGTGTAGTCTaGGACAGACATCTCAGCATCTGGAGCAATATCTGC | + |
Preference number: 6 (lower is better) Translates to: PWRLHGVNRGVV*DRHLSIWSNIC Trigger: GCAGATATTGCTCCAGATGCTGAGATGTCTGTCCCAGACTACACCACGGTTCACACCGTGCAGTCTCCAAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 72 bp | CTGGGTATTGCCTTGGGCTATCCCTGCCTTAATCTTTaGGCCTGGGGAAAGGACTACACCACCTGCTGGTGT | + |
Preference number: 6 (lower is better) Translates to: LGIALGYPCLNL*AWGKDYTTCWC Trigger: ACACCAGCAGGTGGTGTAGTCCTTTCCCCAGGCCAAAAGATTAAGGCAGGGATAGCCCAAGGCAATACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 72 bp | CTCACAAAAGTAGGCACTGTTCATGCTGTAATTTTCTaGGCAGGGCGTGGCCACCTCCCGCTGGGTATTGCC | + |
Preference number: 6 (lower is better) Translates to: LTKVGTVHAVIF*AGRGHLPLGIA Trigger: GGCAATACCCAGCGGGAGGTGGCCACGCCCTGCCAAGAAAATTACAGCATGAACAGTGCCTACTTTTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 72 bp | ATCCATCCCTTCAGAACATCTGCATTGGGTGGTGGTTaGCAACTCACTTGGATGTCTCCACGAATCCCGGTC | + |
Preference number: 6 (lower is better) Translates to: IHPFRTSALGGG*QLTWMSPRIPV Trigger: GACCGGGATTCGTGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CAA 90 bp | AGTTGGTGGGTTGCCTCAGTTTCGCTGCTCAAAAGTGGCTGTGGCTaGTTTTCTTCTACTGTCTGGGTAATGGAGGGATGCAGAGAGCCA | + |
Preference number: 6 (lower is better) Translates to: SWWVASVSLLKSGCG*FSSTVWVMEGCREP Trigger: TGGCTCTCTGCATCCCTCCATTACCCAGACAGTAGAAGAAAACAAGCCACAGCCACTTTTGAGCAGCGAAACTGAGGCAACCCACCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | AACCGTGGTGTAGTCTGGGACAGACATCTCAGCATCTaGAGCAATATCTGCTGTCTCAGACATCTGGGCAGT | + |
Preference number: 6 (lower is better) Translates to: NRGVVWDRHLSI*SNICCLRHLGS Trigger: ACTGCCCAGATGTCTGAGACAGCAGATATTGCTCCAGATGCTGAGATGTCTGTCCCAGACTACACCACGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 72 bp | CCAGAAGAACTTGTCCCCAGGCTTGGATTGATTCTTTaGAGAACTGGGGAAGCTTTGCCAAGAGTAGCTGGT | + |
Preference number: 6 (lower is better) Translates to: PEELVPRLGLIL*RTGEALPRVAG Trigger: ACCAGCTACTCTTGGCAAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAGCCTGGGGACAAGTTCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CCA 72 bp | TCTTTGCAGAACTGGGGAAGCTTTGCCAAGAGTAGCTaGTGTAGCCTCACTTCCAGAAAATGTGCTGCTGGT | + |
Preference number: 6 (lower is better) Translates to: SLQNWGSFAKSS*CSLTSRKCAAG Trigger: ACCAGCAGCACATTTTCTGGAAGTGAGGCTACACCAGCTACTCTTGGCAAAGCTTCCCCAGTTCTGCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CAA 72 bp | CGAGGCTTTCCAGAAGAACTTGTCCCCAGGCTTGGATaGATTCTTTGCAGAACTGGGGAAGCTTTGCCAAGA | + |
Preference number: 6 (lower is better) Translates to: RGFPEELVPRLG*ILCRTGEALPR Trigger: TCTTGGCAAAGCTTCCCCAGTTCTGCAAAGAATCAATCCAAGCCTGGGGACAAGTTCTTCTGGAAAGCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CAA 72 bp | GTTGCCTCAGTTTCGCTGCTCAAAAGTGGCTGTGGCTaGTTTTCTTCTACTGTCTGGGTAATGGAGGGATGC | + |
Preference number: 6 (lower is better) Translates to: VASVSLLKSGCG*FSSTVWVMEGC Trigger: GCATCCCTCCATTACCCAGACAGTAGAAGAAAACAAGCCACAGCCACTTTTGAGCAGCGAAACTGAGGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 90 bp | ATGGCGGATCCTCTGAAGCTGGTGATACAGGTGGTTGTCAATCTCTaGATGTGGGTGCTGAGAATTGGACTTGGTTCCTTCTTCACATGC | + |
Preference number: 6 (lower is better) Translates to: MADPLKLVIQVVVNL*MWVLRIGLGSFFTC Trigger: GCATGTGAAGAAGGAACCAAGTCCAATTCTCAGCACCCACATCAAGAGATTGACAACCACCTGTATCACCAGCTTCAGAGGATCCGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110697.9 ENSMUST00000110698.9 |
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CDS CCA 72 bp | AATTATCCATCCCTTCAGAACATCTGCATTGGGTGGTaGTTGCCAACTCACTTGGATGTCTCCACGAATCCC | + |
Preference number: 6 (lower is better) Translates to: NYPSLQNICIGW*LPTHLDVSTNP Trigger: GGGATTCGTGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGATAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CCA 72 bp | GAGTTGGTGGGTTGCCTCAGTTTCGCTGCTCAAAAGTaGCTGTGGCTTGTTTTCTTCTACTGTCTGGGTAAT | + |
Preference number: 6 (lower is better) Translates to: ELVGCLSFAAQK*LWLVFFYCLGN Trigger: ATTACCCAGACAGTAGAAGAAAACAAGCCACAGCCACTTTTGAGCAGCGAAACTGAGGCAACCCACCAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 90 bp | CTGGGCAGTAGTGGTAAGGCTTTCTGTGGTGATGTAAATGTCCTCTaGGTTAAAGCTTGGTTTTATACAAGACGTGGCTTCCATGCGAGG | + |
Preference number: 6 (lower is better) Translates to: LGSSGKAFCGDVNVL*VKAWFYTRRGFHAR Trigger: CCTCGCATGGAAGCCACGTCTTGTATAAAACCAAGCTTTAACCAAGAGGACATTTACATCACCACAGAAAGCCTTACCACTACTGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS TCA 72 bp | GTCGCTTACTTGGGCATAAAAGTCAATGTTTGCCAGTaGTGTGGGATTACTCATCGGTGTAGAGGCGAGTTG | + |
Preference number: 6 (lower is better) Translates to: VAYLGIKVNVCQ*CGITHRCRGEL Trigger: CAACTCGCCTCTACACCGATGAGTAATCCCACATCACTGGCAAACATTGACTTTTATGCCCAAGTAAGCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | CAGAATTATCCATCCCTTCAGAACATCTGCATTGGGTaGTGGTTGCCAACTCACTTGGATGTCTCCACGAAT | + |
Preference number: 6 (lower is better) Translates to: QNYPSLQNICIG*WLPTHLDVSTN Trigger: ATTCGTGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGATAATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CCA 72 bp | GTTCACCTCCTCCAACTTCCCTTCCTTGAGAAGATCTaGATCAATCCCTTTAATCTTTGGAACTGGGACTGG | + |
Preference number: 6 (lower is better) Translates to: VHLLQLPFLEKI*INPFNLWNWDW Trigger: CCAGTCCCAGTTCCAAAGATTAAAGGGATTGATCCAGATCTTCTCAAGGAAGGGAAGTTGGAGGAGGTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | GGAAATCAGTATCCAAAATGTCAGGGTCGTAACAGCTaGTACGCCCAGAATCATCATCCTTTGCTCCAAGGA | + |
Preference number: 6 (lower is better) Translates to: GNQYPKCQGRNS*YAQNHHPLLQG Trigger: TCCTTGGAGCAAAGGATGATGATTCTGGGCGTACCAGCTGTTACGACCCTGACATTTTGGATACTGATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 72 bp | CCATTCCTGGGTCCATTCATGAGCAATTCTTGCAGCTaGTCGTTGGCTTTCCCTTTTAGCATAGTACAGCTG | + |
Preference number: 6 (lower is better) Translates to: PFLGPFMSNSCS*SLAFPFSIVQL Trigger: CAGCTGTACTATGCTAAAAGGGAAAGCCAACGACAAGCTGCAAGAATTGCTCATGAATGGACCCAGGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CAA 72 bp | TACTCCAGAATTATCCATCCCTTCAGAACATCTGCATaGGGTGGTGGTTGCCAACTCACTTGGATGTCTCCA | + |
Preference number: 6 (lower is better) Translates to: YSRIIHPFRTSA*GGGCQLTWMSP Trigger: TGGAGACATCCAAGTGAGTTGGCAACCACCACCCAATGCAGATGTTCTGAAGGGATGGATAATTCTGGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 |
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CDS CAA 72 bp | GGTCGTAACAGCTGGTACGCCCAGAATCATCATCCTTaGCTCCAAGGATACCAGCTGATTTCTCATGATCAT | + |
Preference number: 6 (lower is better) Translates to: GRNSWYAQNHHP*LQGYQLISHDH Trigger: ATGATCATGAGAAATCAGCTGGTATCCTTGGAGCAAAGGATGATGATTCTGGGCGTACCAGCTGTTACGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CAA 90 bp | TTTCCATTCCTGGGTCCATTCATGAGCAATTCTTGCAGCTTGTCGTaGGCTTTCCCTTTTAGCATAGTACAGCTGAATAGATCCTGGGGT | + |
Preference number: 6 (lower is better) Translates to: FPFLGPFMSNSCSLS*AFPFSIVQLNRSWG Trigger: ACCCCAGGATCTATTCAGCTGTACTATGCTAAAAGGGAAAGCCAACGACAAGCTGCAAGAATTGCTCATGAATGGACCCAGGAATGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CAA 90 bp | ATGTCTCCACGAATCCCGGTCAAACTAATGTTTAGTAAAGTCCAGTaGAGGCCAATGGGTGGATCAGGTTGCACTATTTCGTCAACAGTG | + |
Preference number: 6 (lower is better) Translates to: MSPRIPVKLMFSKVQ*RPMGGSGCTISSTV Trigger: CACTGTTGACGAAATAGTGCAACCTGATCCACCCATTGGCCTCAACTGGACTTTACTAAACATTAGTTTGACCGGGATTCGTGGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CCA 72 bp | TTCTGTGGTGATGTAAATGTCCTCTTGGTTAAAGCTTaGTTTTATACAAGACGTGGCTTCCATGCGAGGGGC | + |
Preference number: 6 (lower is better) Translates to: FCGDVNVLLVKA*FYTRRGFHARG Trigger: GCCCCTCGCATGGAAGCCACGTCTTGTATAAAACCAAGCTTTAACCAAGAGGACATTTACATCACCACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | AAGCTGGTGATACAGGTGGTTGTCAATCTCTTGATGTaGGTGCTGAGAATTGGACTTGGTTCCTTCTTCACA | + |
Preference number: 6 (lower is better) Translates to: KLVIQVVVNLLM*VLRIGLGSFFT Trigger: TGTGAAGAAGGAACCAAGTCCAATTCTCAGCACCCACATCAAGAGATTGACAACCACCTGTATCACCAGCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110697.9 ENSMUST00000110698.9 |
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CDS CAA 72 bp | CGAATCCCGGTCAAACTAATGTTTAGTAAAGTCCAGTaGAGGCCAATGGGTGGATCAGGTTGCACTATTTCG | + |
Preference number: 6 (lower is better) Translates to: RIPVKLMFSKVQ*RPMGGSGCTIS Trigger: CGAAATAGTGCAACCTGATCCACCCATTGGCCTCAACTGGACTTTACTAAACATTAGTTTGACCGGGATTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CAA 90 bp | GCATTCTTTCCATTCCTGGGTCCATTCATGAGCAATTCTTGCAGCTaGTCGTTGGCTTTCCCTTTTAGCATAGTACAGCTGAATAGATCC | + |
Preference number: 6 (lower is better) Translates to: AFFPFLGPFMSNSCS*SLAFPFSIVQLNRS Trigger: GGATCTATTCAGCTGTACTATGCTAAAAGGGAAAGCCAACGACAAGCTGCAAGAATTGCTCATGAATGGACCCAGGAATGGAAAGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS CAA 90 bp | AAATGTCAGGGTCGTAACAGCTGGTACGCCCAGAATCATCATCCTTaGCTCCAAGGATACCAGCTGATTTCTCATGATCATTGCTTAGAA | + |
Preference number: 6 (lower is better) Translates to: KCQGRNSWYAQNHHP*LQGYQLISHDHCLE Trigger: TTCTAAGCAATGATCATGAGAAATCAGCTGGTATCCTTGGAGCAAAGGATGATGATTCTGGGCGTACCAGCTGTTACGACCCTGACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 72 bp | AGTAAAGTCCAGTTGAGGCCAATGGGTGGATCAGGTTaGACTATTTCGTCAACAGTGAAACATTTTTGGTCC | + |
Preference number: 6 (lower is better) Translates to: SKVQLRPMGGSG*TISSTVKHFWS Trigger: GGACCAAAAATGTTTCACTGTTGACGAAATAGTGCAACCTGATCCACCCATTGGCCTCAACTGGACTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS GCA 72 bp | TTGCTCCAAGGATACCAGCTGATTTCTCATGATCATTaGTTAGAAGTCTGTCTGTGTCAGACCCTTCAGTCT | + |
Preference number: 6 (lower is better) Translates to: LLQGYQLISHDH*LEVCLCQTLQS Trigger: AGACTGAAGGGTCTGACACAGACAGACTTCTAAGCAATGATCATGAGAAATCAGCTGGTATCCTTGGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS TCA 72 bp | TCTCATCCACATCTGCTTCATCAATATCTAGCTCAATaGACTCGACCCAGGAATCATCATTGTAGAAGTCGG | + |
Preference number: 6 (lower is better) Translates to: SHPHLLHQYLAQ*TRPRNHHCRSR Trigger: CCGACTTCTACAATGATGATTCCTGGGTCGAGTTCATTGAGCTAGATATTGATGAAGCAGATGTGGATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS GCA 72 bp | TTCTTTCCATTCCTGGGTCCATTCATGAGCAATTCTTaGAGCTTGTCGTTGGCTTTCCCTTTTAGCATAGTA | + |
Preference number: 6 (lower is better) Translates to: FFPFLGPFMSNS*SLSLAFPFSIV Trigger: TACTATGCTAAAAGGGAAAGCCAACGACAAGCTGCAAGAATTGCTCATGAATGGACCCAGGAATGGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069451.11 ENSMUST00000110697.9 ENSMUST00000110698.9 ENSMUST00000161561.8 ENSMUST00000161770.2 |
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CDS GCA 72 bp | CATCATTGTAGAAGTCGGGTTTGTAGTTATCATGAATaGCTAAGATGGTGTTCACCTCCTCCAACTTCCCTT | + |
Preference number: 6 (lower is better) Translates to: HHCRSRVCSYHE*LRWCSPPPTSL Trigger: AAGGGAAGTTGGAGGAGGTGAACACCATCTTAGGCATTCATGATAACTACAAACCCGACTTCTACAATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | ACTGAGCAAACTTCAAGGTACCATCACACATGTCACTaGTATGGAAATCAGTATCCAAAATGTCAGGGTCGT | + |
Preference number: 6 (lower is better) Translates to: TEQTSRYHHTCH*YGNQYPKCQGR Trigger: ACGACCCTGACATTTTGGATACTGATTTCCATACCAGTGACATGTGTGATGGTACCTTGAAGTTTGCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |
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CDS CCA 72 bp | TGTCAATCTCTTGATGTGGGTGCTGAGAATTGGACTTaGTTCCTTCTTCACATGCTTCCAATATGTTCGTCT | + |
Preference number: 6 (lower is better) Translates to: CQSLDVGAENWT*FLLHMLPICSS Trigger: AGACGAACATATTGGAAGCATGTGAAGAAGGAACCAAGTCCAATTCTCAGCACCCACATCAAGAGATTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110697.9 ENSMUST00000110698.9 |
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CDS TCA 72 bp | CACAAGAGATCAGCTTCCATATTTAACTTCTGTGACTaGGCAAACTTCAAGGTACCATCACACATGTCACTG | + |
Preference number: 6 (lower is better) Translates to: HKRSASIFNFCD*ANFKVPSHMSL Trigger: CAGTGACATGTGTGATGGTACCTTGAAGTTTGCTCAGTCACAGAAGTTAAATATGGAAGCTGATCTCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069451.11 ENSMUST00000161561.8 |