Pregenerated sensors for GALK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027207Ensembl transcript IDs: ENSMUST00000028636.13, ENSMUST00000094604.9, ENSMUST00000131643.8, ENSMUST00000134337.8, ENSMUST00000134798.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAGGTATACAAACAAGCCTTGCCAGGCAGCCACAAGAGGGATGTaGGGTATGGATGGGGCTGTCAGGATGGAAAGGCATTGGACAAGT | + |
|
Preference number: 1 (lower is better) Translates to: TRYTNKPCQAATRGM*GMDGAVRMERHWTS Trigger: ACTTGTCCAATGCCTTTCCATCCTGACAGCCCCATCCATACCTCACATCCCTCTTGTGGCTGCCTGGCAAGGCTTGTTTGTATACCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CCA 90 bp | ATACAAACAAGCCTTGCCAGGCAGCCACAAGAGGGATGTGAGGTATaGATGGGGCTGTCAGGATGGAAAGGCATTGGACAAGTAGAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: IQTSLARQPQEGCEV*MGLSGWKGIGQVEV Trigger: CACTTCTACTTGTCCAATGCCTTTCCATCCTGACAGCCCCATCCATACCTCACATCCCTCTTGTGGCTGCCTGGCAAGGCTTGTTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR GCA 90 bp | CCTTGTGCCCTTACTTCATCACTGTCGGTTCACACTTTAGGCTTTTaGTTATTCACCCAAAGCTGTGTACTGCACATCTGCCCTACAGGG | + |
|
Preference number: 1 (lower is better) Translates to: PCALTSSLSVHTLGF*LFTQSCVLHICPTG Trigger: CCCTGTAGGGCAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGTGATGAAGTAAGGGCACAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CCA 90 bp | CAGAAGACTTCAACAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTaGCCGCCATTCAAGAGCAACACACAGTTCAGTTGTATCAGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: QKTSTMWKRAKGSQQ*PPFKSNTQFSCISL Trigger: TAAACTGATACAACTGAACTGTGTGTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTGTTGAAGTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CCA 90 bp | AATCATCATCGTCATTTCCTACTATATCAGAAGACTTCAACAATGTaGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCATTCAAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: NHHRHFLLYQKTSTM*KRAKGSQQWPPFKS Trigger: GCTCTTGAATGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTGTTGAAGTCTTCTGATATAGTAGGAAATGACGATGATGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR GCA 90 bp | AGGAATATGGAGGATCAACATCAGCATCAGAGTCGCCACAGTCGATaGAGTCACCACAATCATCATCGTCATTTCCTACTATATCAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: RNMEDQHQHQSRHSR*SHHNHHRHFLLYQK Trigger: CTTCTGATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACTCTGATGCTGATGTTGATCCTCCATATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CCA 90 bp | GCTGTAGTACTGAAGTCTGGATACAAGGGGTCTGTATTAGCCAGTTaGAGAGTGTGTGTTTTCACAGGTTCCACAGCTATTAACATGTCT | + |
|
Preference number: 1 (lower is better) Translates to: AVVLKSGYKGSVLAS*RVCVFTGSTAINMS Trigger: AGACATGTTAATAGCTGTGGAACCTGTGAAAACACACACTCTCCAACTGGCTAATACAGACCCCTTGTATCCAGACTTCAGTACTACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR TCA 90 bp | CAAGTAGAAGTGCTAGTGAAAGGACAGTCAATTCAAATTGTCTTCTaGAATCTATCTTTTGGCTCCTCTTCCCAAAGTGATCTTCACCAT | + |
|
Preference number: 1 (lower is better) Translates to: QVEVLVKGQSIQIVF*NLSFGSSSQSDLHH Trigger: ATGGTGAAGATCACTTTGGGAAGAGGAGCCAAAAGATAGATTTCAGAAGACAATTTGAATTGACTGTCCTTTCACTAGCACTTCTACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CAA 90 bp | GTACTGCACATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTaGCCAGGCAGCCACAAGAGGGATGTGAGGTATGGATGGGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VLHICPTGNQVYKQA*PGSHKRDVRYGWGC Trigger: ACAGCCCCATCCATACCTCACATCCCTCTTGTGGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATGTGCAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR TCA 90 bp | TGCACATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTTGCCAGGCAGCCCTCCTCTTCCCAAAGTaGTCTTCACCATCTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CTSALQGTRYTNKPCQAALLFPK*SSPSSE Trigger: CTCTGAAGATGGTGAAGATCACTTTGGGAAGAGGAG...GGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACATCTGCCCTACAGGGGCCACAAGAGGGATGTaGGGTATGGATGGGGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGFCLFTQSCVLHICPTGATRGM*GMDGAV Trigger: GACAGCCCCATCCATACCTCACATCCCTCTTGTGGC...CCCTGTAGGGCAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CAA 90 bp | TTAAACATCTCTTTTAGCTTCAGCAATCTGAGGGACCGCACACAGTaGATGGCTGCTGGGGCGGTGCATCAGTCTGTTTGGAGGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LNISFSFSNLRDRTQ*MAAGAVHQSVWRMW Trigger: CCACATCCTCCAAACAGACTGATGCACCGCCCCAGCAGCCATCAACTGTGTGCGGTCCCTCAGATTGCTGAAGCTAAAAGAGATGTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCACATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTTGCCAGGCAGCCAAGACTTCAACAATGTaGAAGAGGGCTAAGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: CTSALQGTRYTNKPCQAAKTSTM*KRAKGS Trigger: GCTTCCCTTAGCCCTCTTCCACATTGTTGAAGTCTT...GGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGGCAGCCACAAGAGGGATGTGAGGTATGGATGGGGCTGTCAGGATGGAAAAAACAGAAAAAGAGCTaGTTTACTGTGGCACAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ARQPQEGCEVWMGLSGWKKQKKS*FTVAQE Trigger: TTCCTGTGCCACAGTAAATCAGCTCTTTTTCTGTTT...TTTCCATCCTGACAGCCCCATCCATACCTCACATCCCTCTTGTGGCTGCCTGGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCTGGATACAAGGGGTCTGTATTAGCCAGTTGGAGAGTGTGTGTTTTCACACACACAGTTGATGGCTaGTGGGGCGGTGCATCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KSGYKGSVLASWRVCVFTHTVDG*WGGASV Trigger: GACTGATGCACCGCCCCAGCAGCCATCAACTGTGTG...TGTGAAAACACACACTCTCCAACTGGCTAATACAGACCCCTTGTATCCAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTGGATACAAGGGGTCTGTATTAGCCAGTTGGAGAGTGTGTGTTTTCACAGGGCTCACCTATTATGTTaGCTCTTCCTGGGGCTCGAA | + |
|
Preference number: 2 (lower is better) Translates to: VWIQGVCISQLESVCFHRAHLLC*LFLGLE Trigger: TTCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGC...CCTGTGAAAACACACACTCTCCAACTGGCTAATACAGACCCCTTGTATCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTTGCCAGGCAGCCACAAAGGATGGAAAGGCATTaGACAAGTAGAAGTGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: HLPYREPGIQTSLARQPQRMERH*TSRSAS Trigger: ACTAGCACTTCTACTTGTCCAATGCCTTTCCATCCT...TTGTGGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACTTCATCACTGTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAAAGAAGGGAAGCCAGCAGTaGCCGCCATTCAAGAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: PYFITVGSHFRLLLIHPKKGSQQ*PPFKSN Trigger: GTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCCTT...CTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGTGATGAAGTAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGCTGGAGAGGCCCGAACTCGGGGGTATATTTCCATCTACCAGGCAATTCATCTGTATTAGCCAGTTaGAGAGTGTGTGTTTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: WSWRGPNSGVYFHLPGNSSVLAS*RVCVFT Trigger: TGTGAAAACACACACTCTCCAACTGGCTAATACAGA...TGAATTGCCTGGTAGATGGAAATATACCCCCGAGTTCGGGCCTCTCCAGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACATCTGCCCTACATTCTTCCTAGCGTGTTaGGGCAAAACTCAAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TLGFCLFTQSCVLHICPTFFLAC*GKTQGG Trigger: TCCTCCTTGAGTTTTGCCTCAACACGCTAGGAAGAA...TGTAGGGCAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CAA 90 bp | GGGAAGCCAGCAGTGGCCGCCATTCAAGAGCAACACACAGTTCAGTaGTATCAGTTTAATTGGAGCAGTGTTCAATTAAAAGTACATTTT | + |
|
Preference number: 2 (lower is better) Translates to: GKPAVAAIQEQHTVQ*YQFNWSSVQLKVHF Trigger: AAAATGTACTTTTAATTGAACACTGCTCCAATTAAACTGATACAACTGAACTGTGTGTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCCAAAGTGTTCCTGAATTCCCTTAAAGCCACACAAGAAGTAGTTGTGCCATATGTTGACTCTTCCTaGGGCTCGAACATAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: KAKVFLNSLKATQEVVVPYVDSS*GSNIKL Trigger: AAGTTTTATGTTCGAGCCCCAGGAAGAGTCAACATA...TGGCACAACTACTTCTTGTGTGGCTTTAAGGGAATTCAGGAACACTTTGGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCGCCACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTATATGAAAAGTGGTCATTATaGAGTCTAGCTTTCACCATT | + |
|
Preference number: 2 (lower is better) Translates to: SRHSRCSHHNHHRHFLLYEKWSL*SLAFTI Trigger: AATGGTGAAAGCTAGACTTCATAATGACCACTTTTC...ATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR GCA 72 bp | CTTCAGCAATCTGAGGGACCGCACACAGTTGATGGCTaGTGGGGCGGTGCATCAGTCTGTTTGGAGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQQSEGPHTVDG*WGGASVCLEDV Trigger: CACATCCTCCAAACAGACTGATGCACCGCCCCAGCAGCCATCAACTGTGTGCGGTCCCTCAGATTGCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR CCA 72 bp | CAGCAATCTGAGGGACCGCACACAGTTGATGGCTGCTaGGGCGGTGCATCAGTCTGTTTGGAGGATGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QQSEGPHTVDGC*GGASVCLEDVV Trigger: AACCACATCCTCCAAACAGACTGATGCACCGCCCCAGCAGCCATCAACTGTGTGCGGTCCCTCAGATTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR CCA 72 bp | AGCCTTGCCAGGCAGCCACAAGAGGGATGTGAGGTATaGATGGGGCTGTCAGGATGGAAAGGCATTGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: SLARQPQEGCEV*MGLSGWKGIGQ Trigger: TTGTCCAATGCCTTTCCATCCTGACAGCCCCATCCATACCTCACATCCCTCTTGTGGCTGCCTGGCAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR TCA 72 bp | CAAGTTCCACCTTGGAAAGTCTCAGTCCCAGCACCGTaGGAGTCACTAACCCAGCACAGCAAACCAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QVPPWKVSVPAP*ESLTQHSKPEH Trigger: GTGCTCTGGTTTGCTGTGCTGGGTTAGTGACTCTCACGGTGCTGGGACTGAGACTTTCCAAGGTGGAACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR CCA 72 bp | TCACTAACCCAGCACAGCAAACCAGAGCACTGGAGCTaGAGAGGCCCGAACTCGGGGGTATATTTCCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLTQHSKPEHWS*RGPNSGVYFHL Trigger: TAGATGGAAATATACCCCCGAGTTCGGGCCTCTCCAGCTCCAGTGCTCTGGTTTGCTGTGCTGGGTTAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR CCA 72 bp | TGCCGCCACCTTCAGTGCCTATGTAGCGCTCACTCTTaGCACAGATTTCTGCAAGTTCCACCTTGGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CRHLQCLCSAHS*HRFLQVPPWKV Trigger: GACTTTCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGCTACATAGGCACTGAAGGTGGCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR CCA 72 bp | TCAACAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTaGCCGCCATTCAAGAGCAACACACAGTTCAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: STMWKRAKGSQQ*PPFKSNTQFSC Trigger: ACAACTGAACTGTGTGTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR CAA 90 bp | GCCTATGTAGCGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGAAAGTGCTCACCTATTATGTaGACTCTTCCTGGGGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: AYVALTLGTDFCKFHLGKCSPIM*TLPGAR Trigger: TCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGCA...CTTTCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGCTACATAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGCTGGAGAGGCCCGAACTCGGGGGTATATTTCCATCTACCAGGCAATTCAGTCTGTATTAGCCAGTaGGAGAGTGTGTGTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WSWRGPNSGVYFHLPGNSVCISQ*ESVCFH Trigger: GTGAAAACACACACTCTCCAACTGGCTAATACAGAC...TGAATTGCCTGGTAGATGGAAATATACCCCCGAGTTCGGGCCTCTCCAGCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR CCA 72 bp | CGTCATTTCCTACTATATCAGAAGACTTCAACAATGTaGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RHFLLYQKTSTM*KRAKGSQQWPP Trigger: TGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTGTTGAAGTCTTCTGATATAGTAGGAAATGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR GCA 72 bp | TTTTGCTTATTCACCCAAAGCTGTGTACTGCACATCTaGCCTACAGGGAACCAGGTATACAAACAAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FCLFTQSCVLHI*PTGNQVYKQAL Trigger: CAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCGAACATAAAACTTGGGTGTGGACCCAAATTTAGAGTTAAACATCTCTTTGGTGCATCAGTCTGTTaGGAGGATGTGGTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GSNIKLGCGPKFRVKHLFGASVC*EDVVPG Trigger: TCCAGGAACCACATCCTCCAAACAGACTGATGCACC...AAAGAGATGTTTAACTCTAAATTTGGGTCCACACCCAAGTTTTATGTTCGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCGCCACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTATATCAACACACAGTTCAGTaGTATCAGTTTAATTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRHSRCSHHNHHRHFLLYQHTVQ*YQFNWS Trigger: GCTCCAATTAAACTGATACAACTGAACTGTGTGTTG...ATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR TCA 72 bp | AATATCCACAGTAATCTATGTGCTCACCTATTATGTTaGCTCTTCCTGGGGCTCGAACATAAAACTTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NIHSNLCAHLLC*LFLGLEHKTWV Trigger: CACCCAAGTTTTATGTTCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGCACATAGATTACTGTGGATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| 3UTR TCA 72 bp | AAAGTGATCTTCACCATCTTCAGAGATGTAGAAATCTaGCATTCAAGTGTACTGTGTGTGTCTAACGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KVIFTIFRDVEI*HSSVLCVSNVC Trigger: GCAGACGTTAGACACACACAGTACACTTGAATGTCAGATTTCTACATCTCTGAAGATGGTGAAGATCACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR TCA 72 bp | GTGCTAGTGAAAGGACAGTCAATTCAAATTGTCTTCTaGAATCTATCTTTTGGCTCCTCTTCCCAAAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLVKGQSIQIVF*NLSFGSSSQSD Trigger: ATCACTTTGGGAAGAGGAGCCAAAAGATAGATTTCAGAAGACAATTTGAATTGACTGTCCTTTCACTAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR TCA 90 bp | TGCACATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTTGCCAGGCAGCCAAGCTATGCTTCTCCTaGGCCAGGCGGGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTSALQGTRYTNKPCQAAKLCFS*ARRDVF Trigger: GAACACATCCCGCCTGGCTCAGGAGAAGCATAGCTT...GGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACTTCAACAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCAATCCCGAGTTTGCTTTaGACTTCCTCTAGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKTSTMWKRAKGSQQWPPIPSLL*TSSSRR Trigger: CCTGCGGCTAGAGGAAGTGCAAAGCAAACTCGGGAT...TGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTGTTGAAGTCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCATTCAAGAGCAACACTGCAAGGAATGATATaGACTGGTCCATGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCGRGLREASSGRHSRATLQGMI*TGPCRH Trigger: GTGGCGGCATGGACCAGTCCATATCATTCCTTGCAG...TGTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | GCCTATGTAGCGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTTGGAAAGGGATGTTCTGCCACCTaGACTCGTCGAGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYVALTLGTDFCKFHLGKGCSAT*TRRVAG Trigger: CCCTGCCACTCGACGAGTCCAGGTGGCAGAACATCC...CTTTCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGCTACATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCATTCAAGAGCAACAGCTCACCTATTATGTTaGCTCTTCCTGGGGCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QCGRGLREASSGRHSRATAHLLC*LFLGLE Trigger: TTCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGC...TGTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | ACTGTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACCAGAGCACTGGAGCTaGAGAGGCCCGAACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVGSHFRLLLIHPKLCTAPEHWS*RGPNSG Trigger: CCCCGAGTTCGGGCCTCTCCAGCTCCAGTGCTCTGG...TGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTTGCCAGGCAGCCACAACGCCTCCAGGCTTGGTaGCAAACAAGCTATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPYREPGIQTSLARQPQRLQAW*QTSYAS Trigger: AGAAGCATAGCTTGTTTGCCACCAAGCCTGGAGGCG...TTGTGGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CAA 72 bp | ATCTGCCCTACAGGGAACCAGGTATACAAACAAGCCTaGCCAGGCAGCCACAAGAGGGATGTGAGGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICPTGNQVYKQA*PGSHKRDVRYG Trigger: TCCATACCTCACATCCCTCTTGTGGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| 3UTR CAA 72 bp | CGCTCACTCTTGGCACAGATTTCTGCAAGTTCCACCTaGGAAAGTCTCAGTCCCAGCACCGTGAGAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSLLAQISASST*ESLSPSTVRVT Trigger: AGTGACTCTCACGGTGCTGGGACTGAGACTTTCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTCCAGCTCAGGGCAGCTaGACTCATACATGTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFPAQGS*THTCPG Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCTGAGCTGG...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAGACTTCAACAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCATTTCCATGCAGCTGTTaGCAATCACAAAGACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKTSTMWKRAKGSQQWPPFPCSC*QSQRLP Trigger: GGGCAGTCTTTGTGATTGCCAACAGCTGCATGGAAA...TGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTGTTGAAGTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGGATGTTCTGCCACCTaGACTCGTCGAGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFGCSAT*TRRVAG Trigger: CCCTGCCACTCGACGAGTCCAGGTGGCAGAACATCC...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094604.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACCAGCTCAGGGCAGCTaGACTCATACATGTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVGSHFRLLLIHPKLCTAPAQGS*THTCPG Trigger: GCCGGGACATGTATGAGTGCAGCTGCCCTGAGCTGG...TGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CACACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACATCTGCCCTCAGATGTCCACTAGCTaGTCCAGCTCAGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTLGFCLFTQSCVLHICPQMSTS*SSSGQL Trigger: CAGCTGCCCTGAGCTGGACCAGCTAGTGGACATCTG...AGGGCAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTCACTGGCGAGAAAGCTaGACAGCATGTCAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFHWRES*TACQRA Trigger: TGCCCGCTGACATGCTGTCCAGCTTTCTCGCCAGTG...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGCCTGACATTGAAATGTaGAGTGGCCGCCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWHRKPRQLLNTQNSFSEPDIEM*SGRLVH Trigger: ATGAACAAGGCGGCCACTTCACATTTCAATGTCAGG...CTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR TCA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTAAGCTATGCTTCTCCTaGGCCAGGCGGGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFKLCFS*ARRDVF Trigger: GAACACATCCCGCCTGGCTCAGGAGAAGCATAGCTT...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | CACACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACATCTGCCCTCAGCTTCTGTGGCTCTaGTTCATTAGCTCCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTLGFCLFTQSCVLHICPQLLWL*FISSPS Trigger: GCTGGGGGAGCTAATGAACCAGAGCCACAGAAGCTG...AGGGCAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGTTAGCTTCAGCAATCTaGGATGTTCTGCCACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWHRKPRQLLNTQNSFSELASAI*DVLPPG Trigger: TCCAGGTGGCAGAACATCCCAGATTGCTGAAGCTAA...CTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | CCCTACAGGGAACCAGGTATACAAACAAGCCTTGCCAGGCAGCCACAAGAGGGATATGTTGACTCTTCCTaGGGCTCGAACATAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PYREPGIQTSLARQPQEGYVDSS*GSNIKL Trigger: AAGTTTTATGTTCGAGCCCCAGGAAGAGTCAACATA...TCCCTCTTGTGGCTGCCTGGCAAGGCTTGTTTGTATACCTGGTTCCCTGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTCTGCAAGGAATGATATaGACTGGTCCATGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFLQGMI*TGPCRH Trigger: GTGGCGGCATGGACCAGTCCATATCATTCCTTGCAG...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGTCCCGGCAGCTTCTGTaGCTCTGGTTCATTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPASSLIPKIVSLRCLTLSRQLL*LWFISS Trigger: GGAGCTAATGAACCAGAGCCACAGAAGCTGCCGGGA...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAGTCGCCACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTAGGCCAAAGTGTTCCTaGATTCCCTTAAAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SESPQSMQSPQSSSSFPTRPKCS*IPLKPH Trigger: GTGTGGCTTTAAGGGAATTCAGGAACACTTTGGCCT...AGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR TCA 90 bp | ACTGTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCATGCTCCAGTAAGTCGTaGGCCTTTGGCCCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TVGSHFRLLLIHPKLCTACSSKS*AFGPKL Trigger: AAGTTTGGGGCCAAAGGCTCACGACTTACTGGAGCA...TGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR GCA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGATATGGACTGGTCCATaGCGCCACCTTCAGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPASSLIPKIVSLRCLTLIWTGP*RHLQCL Trigger: TAGGCACTGAAGGTGGCGGCATGGACCAGTCCATAT...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGCGCCTCCAGGCTTGGTaGCAAACAAGCTATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPASSLIPKIVSLRCLTLRLQAW*QTSYAS Trigger: AGAAGCATAGCTTGTTTGCCACCAAGCCTGGAGGCG...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGGCTCACCTATTATGTTaGCTCTTCCTGGGGCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPASSLIPKIVSLRCLTLAHLLC*LFLGLE Trigger: TTCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGC...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR TCA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTAGGCCAAAGTGTTCCTaGATTCCCTTAAAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFRPKCS*IPLKPH Trigger: GTGTGGCTTTAAGGGAATTCAGGAACACTTTGGCCT...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR GCA 90 bp | CACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTATATCAGAAGATATGGACTGGTCCATaGCGCCACCTTCAGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: HSRCSHHNHHRHFLLYQKIWTGP*RHLQCL Trigger: TAGGCACTGAAGGTGGCGGCATGGACCAGTCCATAT...CTTCTGATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR GCA 90 bp | GTCACCACAATCATCATCGTCATTTCCTACTATATCAGAAGACTTCAACAATGTCCCCAGCAGCTGGACTaGGTTGTCTGGCGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTTIIIVISYYIRRLQQCPQQLD*VVWRIF Trigger: GAAGATGCGCCAGACAACGCAGTCCAGCTGCTGGGG...ACATTGTTGAAGTCTTCTGATATAGTAGGAAATGACGATGATGATTGTGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGTATGTTGACTCTTCCTaGGGCTCGAACATAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LWHRKPRQLLNTQNSFSEYVDSS*GSNIKL Trigger: AAGTTTTATGTTCGAGCCCCAGGAAGAGTCAACATA...CTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | GTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTATATCAGAAGACTTTCCCGGCAGCTTCTGTaGCTCTGGTTCATTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VDAVTTIIIVISYYIRRLSRQLL*LWFISS Trigger: GGAGCTAATGAACCAGAGCCACAGAAGCTGCCGGGA...AAGTCTTCTGATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGTTTCCATGCAGCTGTTaGCAATCACAAAGACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPASSLIPKIVSLRCLTLFPCSC*QSQRLP Trigger: GGGCAGTCTTTGTGATTGCCAACAGCTGCATGGAAA...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCCATGGGAATAACGGAATATCCACAGTAATCTATGTGCTCACCTATTATAACAAACCAGTGGGCTaGGATGTTCTGCCACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSHGNNGISTVIYVLTYYNKPVG*DVLPPG Trigger: TCCAGGTGGCAGAACATCCCAGCCCACTGGTTTGTT...ATAATAGGTGAGCACATAGATTACTGTGGATATTCCGTTATTCCCATGGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACCAGATGTCCACTAGCTaGTCCAGCTCAGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTISLEMHLDNSKRTSQHQMSTS*SSSGQL Trigger: CAGCTGCCCTGAGCTGGACCAGCTAGTGGACATCTG...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACCACTGGCGAGAAAGCTaGACAGCATGTCAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTISLEMHLDNSKRTSQHHWRES*TACQRA Trigger: TGCCCGCTGACATGCTGTCCAGCTTTCTCGCCAGTG...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| 3UTR CAA 72 bp | CCTTACTTCATCACTGTCGGTTCACACTTTAGGCTTTaGCTTATTCACCCAAAGCTGTGTACTGCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYFITVGSHFRL*LIHPKLCTAHL Trigger: CAGATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGTGATGAAGTAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACCAGCTTCTGTGGCTCTaGTTCATTAGCTCCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTISLEMHLDNSKRTSQHQLLWL*FISSPS Trigger: GCTGGGGGAGCTAATGAACCAGAGCCACAGAAGCTG...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR TCA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACTGCTCCAGTAAGTCGTaGGCCTTTGGCCCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FTISLEMHLDNSKRTSQHCSSKS*AFGPKL Trigger: AAGTTTGGGGCCAAAGGCTCACGACTTACTGGAGCA...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR GCA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACATCCCGAGTTTGCTTTaGACTTCCTCTAGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTISLEMHLDNSKRTSQHIPSLL*TSSSRR Trigger: CCTGCGGCTAGAGGAAGTGCAAAGCAAACTCGGGAT...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGTCTGTATTAGCCAGTTaGAGAGTGTGTGTTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPASSLIPKIVSLRCLTLSVLAS*RVCVFT Trigger: TGTGAAAACACACACTCTCCAACTGGCTAATACAGA...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| 3UTR CAA 72 bp | GCAGTGGCCGCCATTCAAGAGCAACACACAGTTCAGTaGTATCAGTTTAATTGGAGCAGTGTTCAATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVAAIQEQHTVQ*YQFNWSSVQLK Trigger: TTTTAATTGAACACTGCTCCAATTAAACTGATACAACTGAACTGTGTGTTGCTCTTGAATGGCGGCCACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTGTCTTCTGAAATCTATCTTTTGGCTCCTCTTCCCAAAGTGATCTTCTCTGTATTAGCCAGTTaGAGAGTGTGTGTTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FKLSSEIYLLAPLPKVIFSVLAS*RVCVFT Trigger: TGTGAAAACACACACTCTCCAACTGGCTAATACAGA...GAAGATCACTTTGGGAAGAGGAGCCAAAAGATAGATTTCAGAAGACAATTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS CCA 90 bp | TCAGGGCAGCTGCACTCATACATGTCCCGGCAGCTTCTGTGGCTCTaGTTCATTAGCTCCCCCAGCAGCTGGACTGCGTTGTCTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGQLHSYMSRQLLWL*FISSPSSWTALSGA Trigger: TGCGCCAGACAACGCAGTCCAGCTGCTGGGGGAGCTAATGAACCAGAGCCACAGAAGCTGCCGGGACATGTATGAGTGCAGCTGCCCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 90 bp | GAGCCAGGCGGGATGTGTTCCCCTGGTAATAAGCTTCGTGCACACTaGCGAGAAAGCTGGACAGCATGTCAGCGGGCACGAGGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: EPGGMCSPGNKLRAH*RESWTACQRARGTQ Trigger: CTGTGTCCCTCGTGCCCGCTGACATGCTGTCCAGCTTTCTCGCCAGTGTGCACGAAGCTTATTACCAGGGGAACACATCCCGCCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 90 bp | AGTCGTGAGCCTTTGGCCCCAAACTTCCGGCAGATGTCCACTAGCTaGTCCAGCTCAGGGCAGCTGCACTCATACATGTCCCGGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SREPLAPNFRQMSTS*SSSGQLHSYMSRQL Trigger: AAGCTGCCGGGACATGTATGAGTGCAGCTGCCCTGAGCTGGACCAGCTAGTGGACATCTGCCGGAAGTTTGGGGCCAAAGGCTCACGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 90 bp | ATGTGTTCCCCTGGTAATAAGCTTCGTGCACACTGGCGAGAAAGCTaGACAGCATGTCAGCGGGCACGAGGGACACAGTGCAGCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: MCSPGNKLRAHWRES*TACQRARGTQCSLP Trigger: GGGGAGGCTGCACTGTGTCCCTCGTGCCCGCTGACATGCTGTCCAGCTTTCTCGCCAGTGTGCACGAAGCTTATTACCAGGGGAACACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS GCA 90 bp | TCCCCCAGCAGCTGGACTGCGTTGTCTGGCGCATCTTCACATACCTaGTTAAACTGCAGCACGCGTGCAGCCTCACTGTACACGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSWTALSGASSHT*LNCSTRAASLYTCL Trigger: CAAGCACGTGTACAGTGAGGCTGCACGCGTGCTGCAGTTTAAGCAGGTATGTGAAGATGCGCCAGACAACGCAGTCCAGCTGCTGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCAGCCACAAGAGGGATGTGAGGTATGGATGGGGCTGTCAGGATGGAAAGTAAGTCGTGAGCCTTaGGCCCCAAACTTCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARQPQEGCEVWMGLSGWKVSREP*APNFRQ Trigger: CTGCCGGAAGTTTGGGGCCAAAGGCTCACGACTTAC...TTTCCATCCTGACAGCCCCATCCATACCTCACATCCCTCTTGTGGCTGCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS CCA 90 bp | TCCCGGCAGCTTCTGTGGCTCTGGTTCATTAGCTCCCCCAGCAGCTaGACTGCGTTGTCTGGCGCATCTTCACATACCTGCTTAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRQLLWLWFISSPSS*TALSGASSHTCLNC Trigger: GCAGTTTAAGCAGGTATGTGAAGATGCGCCAGACAACGCAGTCCAGCTGCTGGGGGAGCTAATGAACCAGAGCCACAGAAGCTGCCGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 90 bp | ATGGATCCACACCCAGGCATATGTAAACACAACAAACCAGTGGGCTaGGATGTTCTGCCACCTGGACTCGTCGAGTGGCAGGGTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MDPHPGICKHNKPVG*DVLPPGLVEWQGPP Trigger: CGGAGGACCCTGCCACTCGACGAGTCCAGGTGGCAGAACATCCCAGCCCACTGGTTTGTTGTGTTTACATATGCCTGGGTGTGGATCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS CCA 90 bp | AGGGAATGGATCCACACCCAGGCATATGTAAACACAACAAACCAGTaGGCTGGGATGTTCTGCCACCTGGACTCGTCGAGTGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: REWIHTQAYVNTTNQ*AGMFCHLDSSSGRV Trigger: GACCCTGCCACTCGACGAGTCCAGGTGGCAGAACATCCCAGCCCACTGGTTTGTTGTGTTTACATATGCCTGGGTGTGGATCCATTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGAAGAGGGCTAAGGGAAGCCAGCAGTGGCCGCCATTCAAGAGCAACATGTGAAGTGGCCGCCTaGTTCATTTCCATGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCGRGLREASSGRHSRATCEVAA*FISMQL Trigger: CAGCTGCATGGAAATGAACAAGGCGGCCACTTCACA...TGTTGCTCTTGAATGGCGGCCACTGCTGGCTTCCCTTAGCCCTCTTCCACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS CCA 90 bp | ACTGGTCCATGCCGCCACCTTCAGTGCCTATGTAGCGCTCACTCTTaGCACAGATTTCTGCAAGTTCCACCTTGGAAAGTCTCAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPCRHLQCLCSAHS*HRFLQVPPWKVSVP Trigger: TGGGACTGAGACTTTCCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGCTACATAGGCACTGAAGGTGGCGGCATGGACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS TCA 90 bp | GACCTTTGCCGCCAGTCGACACTCCATCACCCTGACATTGAAATGTaGAGTGGCCGCCTTGTTCATTTCCATGCAGCTGTTGGCAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: DLCRQSTLHHPDIEM*SGRLVHFHAAVGNH Trigger: GTGATTGCCAACAGCTGCATGGAAATGAACAAGGCGGCCACTTCACATTTCAATGTCAGGGTGATGGAGTGTCGACTGGCGGCAAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS GCA 90 bp | ACTTGGCAGTTCCTTCTTCTGCAAGGAATGATATGGACTGGTCCATaGCGCCACCTTCAGTGCCTATGTAGCGCTCACTCTTGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWQFLLLQGMIWTGP*RHLQCLCSAHSWHR Trigger: TCTGTGCCAAGAGTGAGCGCTACATAGGCACTGAAGGTGGCGGCATGGACCAGTCCATATCATTCCTTGCAGAAGAAGGAACTGCCAAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS GCA 90 bp | CCGAGTTTGCTTTGCACTTCCTCTAGCCGCAGGACATTATCCCATTaGAAGCCTTTGTGTTTAGCAAGGACCTTTGCCGCCAGTCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLCTSSSRRTLSH*KPLCLARTFAASRH Trigger: GTGTCGACTGGCGGCAAAGGTCCTTGCTAAACACAAAGGCTTGCAATGGGATAATGTCCTGCGGCTAGAGGAAGTGCAAAGCAAACTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATTTGGAGTCAGGATTaGGGTGCGGAGTCTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWHRKPRQLLNTQNSFSEIWSQD*GAESLE Trigger: CTCGAGAGACTCCGCACCCAAATCCTGACTCCAAAT...CTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTACTTCATCACTGTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAGCCCCGCCTCCAGGCTaGGTGGCAAACAAGCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: CPYFITVGSHFRLLLIHPAPPPG*VANKLC Trigger: GCATAGCTTGTTTGCCACCAAGCCTGGAGGCGGGGC...TGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGTGATGAAGTAAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS GCA 90 bp | CTTCTGCAAGGAATGATATGGACTGGTCCATGCCGCCACCTTCAGTaGCTATGTAGCGCTCACTCTTGGCACAGATTTCTGCAAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLQGMIWTGPCRHLQ*LCSAHSWHRFLQVP Trigger: TGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGCTACATAGGCACTGAAGGTGGCGGCATGGACCAGTCCATATCATTCCTTGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 90 bp | CTTGGCCCGCTGGTAGAGCTTAAAGGTGAGTTCATCTTGAGTATTTaGAGTCAGGATTTGGGTGCGGAGTCTCTCGAGGCTAATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGPLVELKGEFILSI*SQDLGAESLEANSQ Trigger: CTGGGAATTAGCCTCGAGAGACTCCGCACCCAAATCCTGACTCCAAATACTCAAGATGAACTCACCTTTAAGCTCTACCAGCGGGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATCCATCACCCTGACATaGAAATGTGAAGTGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGTGSPASSLIPKIVSLRSITLT*KCEVAA Trigger: GGCGGCCACTTCACATTTCAATGTCAGGGTGATGGA...TCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGTAAGTCGTGAGCCTTaGGCCCCAAACTTCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRKPRQLLNTQNSFSEMFVSREP*APNFRQ Trigger: CTGCCGGAAGTTTGGGGCCAAAGGCTCACGACTTAC...AAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGCTCACCTATTATGTaGACTCTTCCTGGGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CGTGSPASSLIPKIVSLRCSPIM*TLPGAR Trigger: TCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGCA...TCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTCGCCACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTTCTGCAAGTTCCACCTaGGAAAGTCTCAGTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SESPQSMQSPQSSSSFPTSASST*ESLSPS Trigger: GCTGGGACTGAGACTTTCCAAGGTGGAACTTGCAGA...AGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | CAGCATCAGAGTCGCCACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCATTTCCATGCAGCTGTaGGCAATCACAAAGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QHQSRHSRCSHHNHHRHFISMQL*AITKTA Trigger: GGCAGTCTTTGTGATTGCCAACAGCTGCATGGAAAT...GAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACTCTGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGTGTGAAGTGGCCGCCTaGTTCATTTCCATGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPASSLIPKIVSLRCLTLCEVAA*FISMQL Trigger: CAGCTGCATGGAAATGAACAAGGCGGCCACTTCACA...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGACAGGACATTATCCCATaGCAAGCCTTTGTGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGTGSPASSLIPKIVSLRQDIIP*QAFVFS Trigger: GCTAAACACAAAGGCTTGCAATGGGATAATGTCCTG...TCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | AGTCGCCACAGTCGATGCAGTCACCACAATCATCATCGTCATTTCCTACTATATTGCTCACCTATTATGTaGACTCTTCCTGGGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SRHSRCSHHNHHRHFLLYCSPIM*TLPGAR Trigger: TCGAGCCCCAGGAAGAGTCAACATAATAGGTGAGCA...ATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCGACTGTGGCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCACAGGAAGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGAAAGGTGAGTTCATCTaGAGTATTTGGAGTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWHRKPRQLLNTQNSFSEKGEFI*SIWSQD Trigger: ATCCTGACTCCAAATACTCAAGATGAACTCACCTTT...CTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCTTCCTGTGCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACGCCCCGCCTCCAGGCTaGGTGGCAAACAAGCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: FTISLEMHLDNSKRTSQHAPPPG*VANKLC Trigger: GCATAGCTTGTTTGCCACCAAGCCTGGAGGCGGGGC...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCCGCCAGCTCCTTAATACCCAAAATAGTTTCTCTGAGATGTTTGACATTGATTTCCATGCAGCTGTaGGCAATCACAAAGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPASSLIPKIVSLRCLTLISMQL*AITKTA Trigger: GGCAGTCTTTGTGATTGCCAACAGCTGCATGGAAAT...CAATGTCAAACATCTCAGAGAAACTATTTTGGGTATTAAGGAGCTGGCGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 90 bp | CTCACCTACACAAGAGAAAAAGCAGGCTATTATGTTGACTCTTCCTaGGGCTCGAACATAAAACTTGGGTGTGGACCCAAATTTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTYTREKAGYYVDSS*GSNIKLGCGPKFRV Trigger: AACTCTAAATTTGGGTCCACACCCAAGTTTTATGTTCGAGCCCCAGGAAGAGTCAACATAATAGCCTGCTTTTTCTCTTGTGTAGGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134798.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTCAATTCAAATTGTCTTCTGAAATCTATCTTTTGGCTCCTCTTCCCAAAGTCCATCACCCTGACATaGAAATGTGAAGTGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVNSNCLLKSIFWLLFPKSITLT*KCEVAA Trigger: GGCGGCCACTTCACATTTCAATGTCAGGGTGATGGA...CTTTGGGAAGAGGAGCCAAAAGATAGATTTCAGAAGACAATTTGAATTGACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | AGGATGGAAAGGCATTGGACAAGTAGAAGTGCTAGTGAAAGGACAGTCAATTCATCCCATTGCAAGCCTTaGTGTTTAGCAAGGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RMERHWTSRSASERTVNSSHCKP*CLARTF Trigger: AAAGGTCCTTGCTAAACACAAAGGCTTGCAATGGGA...TGAATTGACTGTCCTTTCACTAGCACTTCTACTTGTCCAATGCCTTTCCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | CCTTACTTCATCACTGTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAAAGCAGGACATTATCCCATaGCAAGCCTTTGTGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PYFITVGSHFRLLLIHPKQDIIP*QAFVFS Trigger: GCTAAACACAAAGGCTTGCAATGGGATAATGTCCTG...CTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGACAGTGATGAAGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | CGATGCAGTCACCACAATCATCATCGTCATTTCCTACTATATCAGAAGACTTCAGTCTGTATTAGCCAGTaGGAGAGTGTGTGTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RCSHHNHHRHFLLYQKTSVCISQ*ESVCFH Trigger: GTGAAAACACACACTCTCCAACTGGCTAATACAGAC...TGAAGTCTTCTGATATAGTAGGAAATGACGATGATGATTGTGGTGACTGCATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACATTTGGAGTCAGGATTaGGGTGCGGAGTCTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FTISLEMHLDNSKRTSQHIWSQD*GAESLE Trigger: CTCGAGAGACTCCGCACCCAAATCCTGACTCCAAAT...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | GTCGGTTCACACTTTAGGCTTTTGCTTATTCACCCAAAGCTGTGTACTGCACATAAAGGTGAGTTCATCTaGAGTATTTGGAGTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGSHFRLLLIHPKLCTAHKGEFI*SIWSQD Trigger: ATCCTGACTCCAAATACTCAAGATGAACTCACCTTT...ATGTGCAGTACACAGCTTTGGGTGAATAAGCAAAAGCCTAAAGTGTGAACCGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | AGGATGGAAAGGCATTGGACAAGTAGAAGTGCTAGTGAAAGGACAGTCAATTCACTAAATTCTATTAACTaGGCAGTTCCTTCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMERHWTSRSASERTVNSLNSIN*AVPSSA Trigger: TGCAGAAGAAGGAACTGCCAAGTTAATAGAATTTAG...TGAATTGACTGTCCTTTCACTAGCACTTCTACTTGTCCAATGCCTTTCCATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTCAATTCAAATTGTCTTCTGAAATCTATCTTTTGGCTCCTCTTCCCAAAGGTTCATCTTGAGTATTaGGAGTCAGGATTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVNSNCLLKSIFWLLFPKVHLEY*ESGFGC Trigger: GCACCCAAATCCTGACTCCAAATACTCAAGATGAAC...CTTTGGGAAGAGGAGCCAAAAGATAGATTTCAGAAGACAATTTGAATTGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028636.13 |
||
| CDS-3UTR CAA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACGTCTGTATTAGCCAGTaGGAGAGTGTGTGTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FTISLEMHLDNSKRTSQHVCISQ*ESVCFH Trigger: GTGAAAACACACACTCTCCAACTGGCTAATACAGAC...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACTCCCATTGCAAGCCTTaGTGTTTAGCAAGGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FTISLEMHLDNSKRTSQHSHCKP*CLARTF Trigger: AAAGGTCCTTGCTAAACACAAAGGCTTGCAATGGGA...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACGTTCATCTTGAGTATTaGGAGTCAGGATTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTISLEMHLDNSKRTSQHVHLEY*ESGFGC Trigger: GCACCCAAATCCTGACTCCAAATACTCAAGATGAAC...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS-3UTR CAA 90 bp | TTCACCATTTCTTTAGAAATGCATCTTGATAATAGCAAACGTACCTCACAACACCTAAATTCTATTAACTaGGCAGTTCCTTCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTISLEMHLDNSKRTSQHLNSIN*AVPSSA Trigger: TGCAGAAGAAGGAACTGCCAAGTTAATAGAATTTAG...GTGTTGTGAGGTACGTTTGCTATTATCAAGATGCATTTCTAAAGAAATGGTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | CCTCACGGAAAACCAAGGCCCCGCCTCCAGGCTTGGTaGCAAACAAGCTATGCTTCTCCTGAGCCAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHGKPRPRLQAW*QTSYASPEPGG Trigger: CCCGCCTGGCTCAGGAGAAGCATAGCTTGTTTGCCACCAAGCCTGGAGGCGGGGCCTTGGTTTTCCGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS TCA 72 bp | CACAGTGCAGCCTCCCCATCCTGCTCCAGTAAGTCGTaGGCCTTTGGCCCCAAACTTCCGGCAGATGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HSAASPSCSSKS*AFGPKLPADVH Trigger: GTGGACATCTGCCGGAAGTTTGGGGCCAAAGGCTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 72 bp | CAGCCTCCCCATCCTGCTCCAGTAAGTCGTGAGCCTTaGGCCCCAAACTTCCGGCAGATGTCCACTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPPHPAPVSREP*APNFRQMSTSW Trigger: CCAGCTAGTGGACATCTGCCGGAAGTTTGGGGCCAAAGGCTCACGACTTACTGGAGCAGGATGGGGAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | CTGCACTCATACATGTCCCGGCAGCTTCTGTGGCTCTaGTTCATTAGCTCCCCCAGCAGCTGGACTGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LHSYMSRQLLWL*FISSPSSWTAL Trigger: CAACGCAGTCCAGCTGCTGGGGGAGCTAATGAACCAGAGCCACAGAAGCTGCCGGGACATGTATGAGTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | CCTTTGGCCCCAAACTTCCGGCAGATGTCCACTAGCTaGTCCAGCTCAGGGCAGCTGCACTCATACATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLAPNFRQMSTS*SSSGQLHSYMS Trigger: GGACATGTATGAGTGCAGCTGCCCTGAGCTGGACCAGCTAGTGGACATCTGCCGGAAGTTTGGGGCCAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | CCTGGTAATAAGCTTCGTGCACACTGGCGAGAAAGCTaGACAGCATGTCAGCGGGCACGAGGGACACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGNKLRAHWRES*TACQRARGTQC Trigger: GCACTGTGTCCCTCGTGCCCGCTGACATGCTGTCCAGCTTTCTCGCCAGTGTGCACGAAGCTTATTACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | CTTCTGTGGCTCTGGTTCATTAGCTCCCCCAGCAGCTaGACTGCGTTGTCTGGCGCATCTTCACATACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLWLWFISSPSS*TALSGASSHTC Trigger: GCAGGTATGTGAAGATGCGCCAGACAACGCAGTCCAGCTGCTGGGGGAGCTAATGAACCAGAGCCACAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | GGGATGTGTTCCCCTGGTAATAAGCTTCGTGCACACTaGCGAGAAAGCTGGACAGCATGTCAGCGGGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: GMCSPGNKLRAH*RESWTACQRAR Trigger: TCGTGCCCGCTGACATGCTGTCCAGCTTTCTCGCCAGTGTGCACGAAGCTTATTACCAGGGGAACACATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 90 bp | CTTCTGTGGCTCTGGTTCATTAGCTCCCCCAGCAGCTGGACTGCGTaGTCTGGCGCATCTTCACATACCTGCTTAAACTGCAGCACGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLWLWFISSPSSWTA*SGASSHTCLNCSTR Trigger: ACGCGTGCTGCAGTTTAAGCAGGTATGTGAAGATGCGCCAGACAACGCAGTCCAGCTGCTGGGGGAGCTAATGAACCAGAGCCACAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | CACCCAGGCATATGTAAACACAACAAACCAGTGGGCTaGGATGTTCTGCCACCTGGACTCGTCGAGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPGICKHNKPVG*DVLPPGLVEWQ Trigger: CTGCCACTCGACGAGTCCAGGTGGCAGAACATCCCAGCCCACTGGTTTGTTGTGTTTACATATGCCTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS CAA 72 bp | GACTCGTCGAGTGGCAGGGTCCTCCGCAGCCATATTTaGCTAGATCCCTCTGCAGTTTCCAGAAGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DSSSGRVLRSHI*LDPSAVSRSAA Trigger: TGCTGCACTTCTGGAAACTGCAGAGGGATCTAGCAAAATATGGCTGCGGAGGACCCTGCCACTCGACGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134337.8 |
||
| CDS CAA 72 bp | TGTGAAGTGGCCGCCTTGTTCATTTCCATGCAGCTGTaGGCAATCACAAAGACTGCCCCACTGGGGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CEVAALFISMQL*AITKTAPLGSF Trigger: GAAGCTCCCCAGTGGGGCAGTCTTTGTGATTGCCAACAGCTGCATGGAAATGAACAAGGCGGCCACTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 72 bp | CTCTGGTTCATTAGCTCCCCCAGCAGCTGGACTGCGTaGTCTGGCGCATCTTCACATACCTGCTTAAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWFISSPSSWTA*SGASSHTCLNC Trigger: GCAGTTTAAGCAGGTATGTGAAGATGCGCCAGACAACGCAGTCCAGCTGCTGGGGGAGCTAATGAACCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS GCA 72 bp | GGAATGATATGGACTGGTCCATGCCGCCACCTTCAGTaGCTATGTAGCGCTCACTCTTGGCACAGATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GMIWTGPCRHLQ*LCSAHSWHRFL Trigger: CAGAAATCTGTGCCAAGAGTGAGCGCTACATAGGCACTGAAGGTGGCGGCATGGACCAGTCCATATCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | ATCCACACCCAGGCATATGTAAACACAACAAACCAGTaGGCTGGGATGTTCTGCCACCTGGACTCGTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: IHTQAYVNTTNQ*AGMFCHLDSSS Trigger: ACTCGACGAGTCCAGGTGGCAGAACATCCCAGCCCACTGGTTTGTTGTGTTTACATATGCCTGGGTGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131643.8 |
||
| CDS CAA 72 bp | TCCTCTAGCCGCAGGACATTATCCCATTGCAAGCCTTaGTGTTTAGCAAGGACCTTTGCCGCCAGTCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRRTLSHCKP*CLARTFAASRH Trigger: GTGTCGACTGGCGGCAAAGGTCCTTGCTAAACACAAAGGCTTGCAATGGGATAATGTCCTGCGGCTAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 90 bp | GTACACGTGCTTGGCCCGCTGGTAGAGCTTAAAGGTGAGTTCATCTaGAGTATTTGGAGTCAGGATTTGGGTGCGGAGTCTCTCGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VHVLGPLVELKGEFI*SIWSQDLGAESLEA Trigger: AGCCTCGAGAGACTCCGCACCCAAATCCTGACTCCAAATACTCAAGATGAACTCACCTTTAAGCTCTACCAGCGGGCCAAGCACGTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 90 bp | TTAGCAAGGACCTTTGCCGCCAGTCGACACTCCATCACCCTGACATaGAAATGTGAAGTGGCCGCCTTGTTCATTTCCATGCAGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LARTFAASRHSITLT*KCEVAALFISMQLL Trigger: CAACAGCTGCATGGAAATGAACAAGGCGGCCACTTCACATTTCAATGTCAGGGTGATGGAGTGTCGACTGGCGGCAAAGGTCCTTGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS TCA 72 bp | CGCCAGTCGACACTCCATCACCCTGACATTGAAATGTaGAGTGGCCGCCTTGTTCATTTCCATGCAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RQSTLHHPDIEM*SGRLVHFHAAV Trigger: AACAGCTGCATGGAAATGAACAAGGCGGCCACTTCACATTTCAATGTCAGGGTGATGGAGTGTCGACTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS GCA 72 bp | TTCCTTCTTCTGCAAGGAATGATATGGACTGGTCCATaGCGCCACCTTCAGTGCCTATGTAGCGCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLLLQGMIWTGP*RHLQCLCSAHS Trigger: AGAGTGAGCGCTACATAGGCACTGAAGGTGGCGGCATGGACCAGTCCATATCATTCCTTGCAGAAGAAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 72 bp | ACCTTTGCCGCCAGTCGACACTCCATCACCCTGACATaGAAATGTGAAGTGGCCGCCTTGTTCATTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: TFAASRHSITLT*KCEVAALFISM Trigger: CATGGAAATGAACAAGGCGGCCACTTCACATTTCAATGTCAGGGTGATGGAGTGTCGACTGGCGGCAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 72 bp | GTGACCAACAGCATCTCTTCCAGACTAATCCCGAGTTaGCTTTGCACTTCCTCTAGCCGCAGGACATTATCC | + |
|
Preference number: 6 (lower is better) Translates to: VTNSISSRLIPS*LCTSSSRRTLS Trigger: GGATAATGTCCTGCGGCTAGAGGAAGTGCAAAGCAAACTCGGGATTAGTCTGGAAGAGATGCTGTTGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 72 bp | CTTGGCCCGCTGGTAGAGCTTAAAGGTGAGTTCATCTaGAGTATTTGGAGTCAGGATTTGGGTGCGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPLVELKGEFI*SIWSQDLGAES Trigger: AGACTCCGCACCCAAATCCTGACTCCAAATACTCAAGATGAACTCACCTTTAAGCTCTACCAGCGGGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 90 bp | ACATTGAAATGTGAAGTGGCCGCCTTGTTCATTTCCATGCAGCTGTaGGCAATCACAAAGACTGCCCCACTGGGGAGCTTCACATTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TLKCEVAALFISMQL*AITKTAPLGSFTLV Trigger: GACTAATGTGAAGCTCCCCAGTGGGGCAGTCTTTGTGATTGCCAACAGCTGCATGGAAATGAACAAGGCGGCCACTTCACATTTCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 90 bp | GTAGAGCTTAAAGGTGAGTTCATCTTGAGTATTTGGAGTCAGGATTaGGGTGCGGAGTCTCTCGAGGCTAATTCCCAGGCACCTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VELKGEFILSIWSQD*GAESLEANSQAPAD Trigger: ATCTGCAGGTGCCTGGGAATTAGCCTCGAGAGACTCCGCACCCAAATCCTGACTCCAAATACTCAAGATGAACTCACCTTTAAGCTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CCA 72 bp | TTAACTTGGCAGTTCCTTCTTCTGCAAGGAATGATATaGACTGGTCCATGCCGCCACCTTCAGTGCCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LTWQFLLLQGMI*TGPCRHLQCLC Trigger: ACATAGGCACTGAAGGTGGCGGCATGGACCAGTCCATATCATTCCTTGCAGAAGAAGGAACTGCCAAGTTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||
| CDS CAA 72 bp | AAAGGTGAGTTCATCTTGAGTATTTGGAGTCAGGATTaGGGTGCGGAGTCTCTCGAGGCTAATTCCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KGEFILSIWSQD*GAESLEANSQA Trigger: TGCCTGGGAATTAGCCTCGAGAGACTCCGCACCCAAATCCTGACTCCAAATACTCAAGATGAACTCACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028636.13 ENSMUST00000094604.9 |
||