Pregenerated sensors for GAA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025579Ensembl transcript IDs: ENSMUST00000026666.13, ENSMUST00000106258.2, ENSMUST00000106259.9, ENSMUST00000132706.8, ENSMUST00000143288.2, ENSMUST00000150562.2
Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCTGCACAGCCTaGTGTTGGTGCAGACACGATGTCCCCACGCCGAGCTCCACATTC | + |
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Preference number: 1 (lower is better) Translates to: PALSLQGCGCSGCTA*CWCRHDVPTPSSTF Trigger: GAATGTGGAGCTCGGCGTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAACCCTGCAGAGACAGAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| 3UTR CCA 90 bp | GGCTTAGCTCCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTTaGTCTTCTTGGACCTTCCTGCTGCGGGGACAGGCACAGGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: GLAPSPQGHPMAVTV*SSWTFLLRGQAQGK Trigger: CTTGCCCTGTGCCTGTCCCCGCAGCAGGAAGGTCCAAGAAGACCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGGAGCTAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
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| 3UTR CCA 90 bp | GGACAGGCACAGGGCAAGTATGTTTCCTTCCCACATGGACATAGCTaGCCTGAGAGAGGAGCAGGGCCAGGAGGACGCACAAACCACATC | + |
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Preference number: 1 (lower is better) Translates to: GQAQGKYVSFPHGHS*PERGAGPGGRTNHI Trigger: GATGTGGTTTGTGCGTCCTCCTGGCCCTGCTCCTCTCTCAGGCCAGCTATGTCCATGTGGGAAGGAAACATACTTGCCCTGTGCCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
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| 3UTR GCA 90 bp | GAGGCGAGCCTCACTCTCCTAAGAACACAGAGCTTCAGGGGCGCATaGAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: EASLTLLRTQSFRGA*SNTVGKAQRCVRRA Trigger: TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCTTAGGAGAGTGAGGCTCGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| 3UTR CCA 90 bp | GCATGGCCTAGAACCTGTGAGGTAAACCACTTTCTCTTCCCCACGTaGCTTCTGTTCGTGTTTACCACAGCAACAGAAAACAAGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: AWPRTCEVNHFLFPT*LLFVFTTATENKTE Trigger: TTCTGTCTTGTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAAGAGAAAGTGGTTTACCTCACAGGTTCTAGGCCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACCTGGGGTGGGGCAGGTaGGGCGAGCCTCACTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHLGWGR*GEPHSP Trigger: AGGAGAGTGAGGCTCGCCTCACCTGCCCCACCCCAG...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| 3UTR CAA 90 bp | GGGCTTAGCTCCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTaGGTCTTCTTGGACCTTCCTGCTGCGGGGACAGGCACAGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GLSSLPSRTSHGCDC*VFLDLPAAGTGTGQ Trigger: TTGCCCTGTGCCTGTCCCCGCAGCAGGAAGGTCCAAGAAGACCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGGAGCTAAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
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| 3UTR-3UTR GCA 90 bp | GCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTAGCTCACTGTGGGGACAGGTTTGCTGATTaGAGAAGCTCTGACCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: AHCGWGLACCGWGLAHCGDRFAD*RSSDPK Trigger: CTTAGGGTCAGAGCTTCTGCAATCAGCAAACCTGTC...CCCACAGTGAGCTAGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTAGCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTAGCTCATTTCTCTTCCCCACGTaGCTTCTGTTCGTGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: GPSTLWVGPSLLWVGPSSFLFPT*LLFVFT Trigger: GGTAAACACGAACAGAAGCCACGTGGGGAAGAGAAA...TGAGCTAGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGCTAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGGGCCTAGCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTGAAAAAGGCAGGGTTTaGAATGAGGTAGACAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VGGPSTLWVGPSLLWVGPEKGRV*NEVDRF Trigger: AAACCTGTCTACCTCATTCCAAACCCTGCCTTTTTC...AGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGCTAGGCCCTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| 3UTR TCA 72 bp | TCTCTGCAGGGTTGCGGCTGCAGTGGCTGCACAGCCTaGTGTTGGTGCAGACACGATGTCCCCACGCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLQGCGCSGCTA*CWCRHDVPTPS Trigger: GCTCGGCGTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAACCCTGCAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| 3UTR GCA 72 bp | GAGCACGAGGCACTCCTGCTGTACTCAGCTGCAGCCTaGTTGGGTTGTGAGAACACCCCTAGCAGGAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: EHEALLLYSAAA*LGCENTPSRRD Trigger: GTCCCTCCTGCTAGGGGTGTTCTCACAACCCAAGCAGGCTGCAGCTGAGTACAGCAGGAGTGCCTCGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
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| 3UTR CCA 72 bp | CCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTTaGTCTTCTTGGACCTTCCTGCTGCGGGGACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PSPQGHPMAVTV*SSWTFLLRGQA Trigger: TGCCTGTCCCCGCAGCAGGAAGGTCCAAGAAGACCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
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| 3UTR CCA 72 bp | ACGAGGCACTCCTGCTGTACTCAGCTGCAGCCTGCTTaGGTTGTGAGAACACCCCTAGCAGGAGGGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: TRHSCCTQLQPA*VVRTPLAGGTS Trigger: AGAAGTCCCTCCTGCTAGGGGTGTTCTCACAACCCAAGCAGGCTGCAGCTGAGTACAGCAGGAGTGCCTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
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| 3UTR CCA 72 bp | CAGGGCAAGTATGTTTCCTTCCCACATGGACATAGCTaGCCTGAGAGAGGAGCAGGGCCAGGAGGACGCACA | + |
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Preference number: 3 (lower is better) Translates to: QGKYVSFPHGHS*PERGAGPGGRT Trigger: TGTGCGTCCTCCTGGCCCTGCTCCTCTCTCAGGCCAGCTATGTCCATGTGGGAAGGAAACATACTTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
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| 3UTR CCA 72 bp | CTCTGCTTCAGTTCCTGCCCCGGCAGTGATGGAGCATaGCCTAGAACCTGTGAGGTAAACCACTTTCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LCFSSCPGSDGA*PRTCEVNHFLF Trigger: GAAGAGAAAGTGGTTTACCTCACAGGTTCTAGGCCATGCTCCATCACTGCCGGGGCAGGAACTGAAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| 3UTR GCA 72 bp | CTCACTCTCCTAAGAACACAGAGCTTCAGGGGCGCATaGAGTAACACGGTGGGAAAAGCTCAAAGATGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LTLLRTQSFRGA*SNTVGKAQRCV Trigger: GACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCTTAGGAGAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| 3UTR CCA 72 bp | AGAACCTGTGAGGTAAACCACTTTCTCTTCCCCACGTaGCTTCTGTTCGTGTTTACCACAGCAACAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RTCEVNHFLFPT*LLFVFTTATEN Trigger: GTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAAGAGAAAGTGGTTTACCTCACAGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| CDS-3UTR TCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCGGGACTCCGTGGTTGTaGGGCTGGGACCCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLGTPWL*GWDPAA Trigger: CGCTGCAGGGTCCCAGCCTCACAACCACGGAGTCCC...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGGGGACTCCGTGGTTGTaGGGCTGGGACCCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLGTPWL*GWDPAA Trigger: CGCTGCAGGGTCCCAGCCTCACAACCACGGAGTCCC...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | GTGGGAGGGCCTAGCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTAGTGGGGATGGTGCCTaGCTCAGCACACGTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VGGPSTLWVGPSLLWVGPSGDGA*LSTRGV Trigger: GACCCCACGTGTGCTGAGCCAGGCACCATCCCCACT...AGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGCTAGGCCCTCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| 3UTR CAA 72 bp | GCAGGGTTGCGGCTGCAGTGGCTGCACAGCCTGATGTaGGTGCAGACACGATGTCCCCACGCCGAGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: AGLRLQWLHSLM*VQTRCPHAELH Trigger: GTGGAGCTCGGCGTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAACCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGGTGTTCCCCGAGTCTTaGCCAGGGCCCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLVFPES*PGPCWR Trigger: CCTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACAC...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCGCTGCGCCGTCTCGCTaGACCTGTACGGCTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLAAPSR*TCTAPE Trigger: CTCAGGAGCCGTACAGGTTCAGCGAGACGGCGCAGC...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGGCTGCGCCGTCTCGCTaGACCTGTACGGCTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLAAPSR*TCTAPE Trigger: CTCAGGAGCCGTACAGGTTCAGCGAGACGGCGCAGC...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCCCACCGTGTCTCCTCTaGCGTGGGCGCGGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: CVRRAGRRSLQEPPARASPPCLL*RGRGGR Trigger: TCTTCCACCGCGCCCACGTCAGAGGAGACACGGTGG...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR GCA 90 bp | GGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCGCCTTCCTCATGGCCTaGTGCGCCGTCTCGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GNLVKAPALSLQGCGCSGAFLMA*CAVSLN Trigger: GTTCAGCGAGACGGCGCAGCAGGCCATGAGGAAGGC...GCCACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCAGCACCTGCCCTGCTaGGACATAGCAGCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: QESRTQVLTGATSQSQLKQHLPC*DIAAAA Trigger: CGCGGCTGCTGCTATGTCCCAGCAGGGCAGGTGCTG...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | GATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGTGTTCCCCGAGTCTTaGCCAGGGCCCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DVSGEQDAGPYRSHQPEPVFPES*PGPCWR Trigger: CCTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACAC...TGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR GCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGGCCTTCCTCATGGCCTaGTGCGCCGTCTCGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGAFLMA*CAVSLN Trigger: GTTCAGCGAGACGGCGCAGCAGGCCATGAGGAAGGC...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGGGAAGAAGGTCGGGCTaGTACGGGTCAGGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLGRRSG*YGSGWL Trigger: CAGCCACCCTGACCCGTACCAGCCCGACCTTCTTCC...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTCCCCAGCGGCAGAGGTaGAAGCCGAGGCCCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSPQRQR*KPRPQY Trigger: ATACTGGGGCCTCGGCTTCCACCTCTGCCGCTGGGG...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTCGAAGGCCTTCCTCATaGCCTGCTGCGCCGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSRRPSS*PAAPSR Trigger: GCGAGACGGCGCAGCAGGCCATGAGGAAGGCCTTCG...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGAGCAAGAAGACACCGTaGGCCAAGCCACCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QESRTQVLTGATSQSQLKSKKTP*AKPPSS Trigger: GGAGGACGGTGGCTTGGCTCACGGTGTCTTCTTGCT...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGAGCAAGAAGACACCGTaGGCCAAGCCACCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLSKKTP*AKPPSS Trigger: GGAGGACGGTGGCTTGGCTCACGGTGTCTTCTTGCT...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR GCA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTTCCTCATGGCCTGCTaGGCCGTCTCGCTGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: CVRRAGRRSLQEPPARASFLMAC*AVSLNL Trigger: CAGGTTCAGCGAGACGGCGCAGCAGGCCATGAGGAA...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGTGGTACGGGTCAGGGTaGCTGTGTACCCCGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGWYGSG*LCTPTL Trigger: CAGAGTCGGGGTACACAGCCACCCTGACCCGTACCA...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGGGGAGGGCAGGGAAGTaGACAGCTGCAGGAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGGRAGK*TAAGTG Trigger: ACCAGTTCCTGCAGCTGTCCACTTCCCTGCCCTCCC...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGAGGCCTGTGATGTGCTaGGAGGGCAGGGAAGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLRPVMC*EGREVD Trigger: GTCCACTTCCCTGCCCTCCCAGCACATCACAGGCCT...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCCCCAGCGGCAGAGGTaGAAGCCGAGGCCCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSPQRQR*KPRPQY Trigger: ATACTGGGGCCTCGGCTTCCACCTCTGCCGCTGGGG...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | GATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCACTACCTGGCGGACAATaGCGGTCGAGGAGTAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: DVSGEQDAGPYRSHQPEPLPGGQ*RSRSSP Trigger: GGGGCTACTCCTCGACCGCCATTGTCCGCCAGGTAG...TGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCCCATCGAAGGGCACCTaGGCGTGGAACTCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: CVRRAGRRSLQEPPARASPSKGT*AWNSDT Trigger: GGTGTCTGAGTTCCACGCCCAGGTGCCCTTCGATGG...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCATCGAAGGGCACCTaGGCGTGGAACTCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLPSKGT*AWNSDT Trigger: GGTGTCTGAGTTCCACGCCCAGGTGCCCTTCGATGG...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | GGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCCCACAGACCAGGTGCTaGGATCCTCAGGGAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: GNLVKAPALSLQGCGCSGPQTRC*DPQGTP Trigger: TGGAGTTCCCTGAGGATCCCAGCACCTGGTCTGTGG...GCCACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR TCA 90 bp | ACTTCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCGTGTTCCCCGAGTCTTaGCCAGGGCCCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSRALEDFWSVLPETHVGVFPES*PGPCWR Trigger: CCTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACAC...GCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
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| CDS-3UTR TCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGTCTTGGCTGAGAAGGTaGCCAGTGTGTAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGSWLRR*PVCRPH Trigger: GTGGGGCCTACACACTGGTCACCTTCTCAGCCAAGA...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCGTAAAGTGGGGATGGTaGCTGGCTCAGCACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVRRAGRRSLQEPPARASVKWGW*LAQHTW Trigger: CCACGTGTGCTGAGCCAGGCACCATCCCCACTTTAC...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | TCACTGTGGGTGGGGCCTAGTTCGTTGTGGGTGGGGCCTAGCTCACTGAGGGTGGTAAAGTGGGGATGGTaGCTGGCTCAGCACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWVGPSSLWVGPSSLRVVKWGW*LAQHTW Trigger: CCACGTGTGCTGAGCCAGGCACCATCCCCACTTTAC...CACCCTCAGTGAGCTAGGCCCCACCCACAACGAACTAGGCCCCACCCACAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCGTAAAGTGGGGATGGTaGCTGGCTCAGCACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLVKWGW*LAQHTW Trigger: CCACGTGTGCTGAGCCAGGCACCATCCCCACTTTAC...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGGGCACAGATGGTGGCTaGCTGCAAGATCCCGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: MCQESRTQVLTGATSQSQGTDGG*LQDPAN Trigger: GTTGGCGGGATCTTGCAGGCAGCCACCATCTGTGCC...CTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGTCCAGTGTCAGCCACTaGCCCTTGCTCTGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGSSVSH*PLLWTA Trigger: TGCTGTCCAGAGCAAGGGGCAGTGGCTGACACTGGA...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCGGTAGCTTGGGTAGCTaGGAGGGAAGAAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLVKAPALSLQGCGCSGGSLGS*EGRNTR Trigger: CCTGGTGTTTCTTCCCTCCCAGCTACCCAAGCTACC...GCCACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGTGGTACGGGTCAGGGTaGCTGTGTACCCCGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCQESRTQVLTGATSQSQWYGSG*LCTPTL Trigger: CAGAGTCGGGGTACACAGCCACCCTGACCCGTACCA...CTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTAGTGGGGATGGTGCCTaGCTCAGCACACGTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSPRRAPHSLVPGEGQTASGDGA*LSTRGV Trigger: GACCCCACGTGTGCTGAGCCAGGCACCATCCCCACT...AGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCGACAGCTGCAGGAACTaGTCAGCGAAGAACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLDSCRN*SAKNRG Trigger: CCCCCTGTTCTTCGCTGACCAGTTCCTGCAGCTGTC...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCAGGGAGGGCAGGGAAGTaGACAGCTGCAGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPGRAGK*TAAGTG Trigger: ACCAGTTCCTGCAGCTGTCCACTTCCCTGCCCTCCC...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGGCTTAGCTCCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTTGGCCCCAGCGGCAGAGGTaGAAGCCGAGGCCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FQGLAPSPQGHPMAVTVWPQRQR*KPRPQY Trigger: ATACTGGGGCCTCGGCTTCCACCTCTGCCGCTGGGG...CCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGGAGCTAAGCCCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| CDS-3UTR CCA 90 bp | GGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCAATCAGGGAAGGCGGTaGTTCCAGGCCAAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNLVKAPALSLQGCGCSGNQGRR*FQAKPS Trigger: GGAAGGTTTGGCCTGGAACCACCGCCTTCCCTGATT...GCCACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCAAGGGCACCTGGGCGTaGAACTCAGACACCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLKGTWA*NSDTMS Trigger: GGACATGGTGTCTGAGTTCCACGCCCAGGTGCCCTT...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAACGAAGGCCTTCCTCATaGCCTGCTGCGCCGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RALEDFWSVLPETHVGCQRRPSS*PAAPSR Trigger: GCGAGACGGCGCAGCAGGCCATGAGGAAGGCCTTCG...TTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGCCACAGACCAGGTGCTaGGATCCTCAGGGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGPQTRC*DPQGTP Trigger: TGGAGTTCCCTGAGGATCCCAGCACCTGGTCTGTGG...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | TCACTGTGGGTGGGGCCTAGTTCGTTGTGGGTGGGGCCTAGCTCACTGAGGGTGCCTGAAGAGGACTCATaGAGGTCTTGGGGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWVGPSSLWVGPSSLRVPEEDS*RSWGSS Trigger: GCTGCTTCCCCAAGACCTTCATGAGTCCTCTTCAGG...CACCCTCAGTGAGCTAGGCCCCACCCACAACGAACTAGGCCCCACCCACAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGCCTGAAGAGGACTCATaGAGGTCTTGGGGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLPEEDS*RSWGSS Trigger: GCTGCTTCCCCAAGACCTTCATGAGTCCTCTTCAGG...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCGGGTCTCAGGGTTGGTaGAATCAGGGAAGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSGSQGW*NQGRRW Trigger: CCACCGCCTTCCCTGATTTCACCAACCCTGAGACCC...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCATTGGGGCAGCCCTGCTaGGAGCCTCTAACGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPLGQPC*EPLTKL Trigger: CAACTTCGTTAGAGGCTCTCAGCAGGGCTGCCCCAA...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGCACGCCCAGCAGGTTaGACTGCAGGATGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSPRRAPHSLVPGEGQTAARPAG*TAGCLA Trigger: TGCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGC...AGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | GAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCTGACCGCTGCGCCGTCTCGCTaGACCTGTACGGCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDFWSVLPETHVGCQSLTAAPSR*TCTAPE Trigger: CTCAGGAGCCGTACAGGTTCAGCGAGACGGCGCAGC...GGTCAGGGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR TCA 90 bp | GCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCCACCGTGTCTCCTCTaGCGTGGGCGCGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALEDFWSVLPETHVGCQSPPCLL*RGRGGR Trigger: TCTTCCACCGCGCCCACGTCAGAGGAGACACGGTGG...GGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | TCACTGTGGGTGGGGCCTAGTTCGTTGTGGGTGGGGCCTAGCTCACTGAGGGTGTTGGGCTGTTCAGTCTaGTCCTGGATGTGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWVGPSSLWVGPSSLRVLGCSV*SWMCRG Trigger: GCCTCTGCACATCCAGGAGCAGACTGAACAGCCCAA...CACCCTCAGTGAGCTAGGCCCCACCCACAACGAACTAGGCCCCACCCACAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR GCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACAGGGCTGGGCTGGGTTaGAGGATGACATCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHRAGLG*RMTSMA Trigger: TGCCATGGATGTCATCCTGCAACCCAGCCCAGCCCT...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGATGGTGGCTGCCTaGAAGATCCCGCCAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSQMVAA*KIPPTT Trigger: GGTGGTTGGCGGGATCTTGCAGGCAGCCACCATCTG...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCGGCACAGATGGTGGCTaGCTGCAAGATCCCGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSGTDGG*LQDPAN Trigger: GTTGGCGGGATCTTGCAGGCAGCCACCATCTGTGCC...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGCCCAGCAGGTTGAACTaGAGGATGTCTGGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLPSRLN*RMSGTE Trigger: CTCTGTGCCAGACATCCTGCAGTTCAACCTGCTGGG...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGCCCAGCAGGTTGAACTaGAGGATGTCTGGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGPSRLN*RMSGTE Trigger: CTCTGTGCCAGACATCCTGCAGTTCAACCTGCTGGG...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | CGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAAGCCTTCCTCATGGCCTaGTGCGCCGTCTCGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RALEDFWSVLPETHVGCQAFLMA*CAVSLN Trigger: GTTCAGCGAGACGGCGCAGCAGGCCATGAGGAAGGC...TTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACTCCAGTGTCAGCCACTaGCCCTTGCTCTGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHSSVSH*PLLWTA Trigger: TGCTGTCCAGAGCAAGGGGCAGTGGCTGACACTGGA...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGGATGTGCAGAGGCCCTaGCTTGTAACCTTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGDVQRP*LVTFLV Trigger: CACCAGGAAGGTTACAAGCCAGGGCCTCTGCACATC...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTAGCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTAGCTCAGTGTGGGTGCTTCTTTaGGCTGTTCAGTCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPSTLWVGPSLLWVGPSSVWVLL*AVQSAP Trigger: AGGAGCAGACTGAACAGCCCAAAGAAGCACCCACAC...TGAGCTAGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGCTAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGGGTAGCTTGGGTAGCTaGGAGGGAAGAAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QESRTQVLTGATSQSQLKGSLGS*EGRNTR Trigger: CCTGGTGTTTCTTCCCTCCCAGCTACCCAAGCTACC...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCGGTCAGCACATCCTTTaGGAAGAAGGTCGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLGQHIL*EEGRAG Trigger: ACCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACC...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCAGCTGTAAAGTGGGGATaGTGCCTGGCTCAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPAVKWG*CLAQHT Trigger: CGTGTGCTGAGCCAGGCACCATCCCCACTTTACAGC...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTAGCTCACTGTTCCACGCTGTAAAGTaGGGATGGTGCCTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTLWVGPSLLWVGPSSLFHAVK*GWCLAQ Trigger: CTGAGCCAGGCACCATCCCCACTTTACAGCGTGGAA...CAGTGAGCTAGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGGTTGCACAACGCTCTTaGGCTCTGGGCCTAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGVAQRS*ALGLGT Trigger: TGTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAAC...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGTCTCCAGTTCATTGTTaGGGCAGCCCTGCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGSPVHC*GSPAES Trigger: GCTCTCAGCAGGGCTGCCCCAACAATGAACTGGAGA...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGTGTACCACGTGCCCTTaGGGAAGTAGCCCGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGCTTCP*GSSPSL Trigger: AAGTGACGGGCTACTTCCCCAAGGGCACGTGGTACA...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGACTGTTTGGTCTTCTTGGACCTTCCTGCTGCGGGGACAGGCACAGGGGCCGAGGCCCCAGTATaGAGGCATGAAGGGGTATCN | + |
|
Preference number: 4 (lower is better) Translates to: GCDCLVFLDLPAAGTGTGAEAPV*RHEGVS Trigger: NGATACCCCTTCATGCCTCCATACTGGGGCCTCGGC...CCCTGTGCCTGTCCCCGCAGCAGGAAGGTCCAAGAAGACCAAACAGTCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| 3UTR CAA 72 bp | CACGAGGCACTCCTGCTGTACTCAGCTGCAGCCTGCTaGGGTTGTGAGAACACCCCTAGCAGGAGGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEALLLYSAAAC*GCENTPSRRDF Trigger: GAAGTCCCTCCTGCTAGGGGTGTTCTCACAACCCAAGCAGGCTGCAGCTGAGTACAGCAGGAGTGCCTCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGCACACTGTGGGTGGGGCCTAGCTTGTTGTGGGTGGGGCCTAGCTCACTGCGTCTTCCACAGTCCTaGAGAGGACTCATGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTLWVGPSLLWVGPSSLRLPQS*RGLMKV Trigger: GACCTTCATGAGTCCTCTTCAGGACTGTGGAAGACG...CAGTGAGCTAGGCCCCACCCACAACAAGCTAGGCCCCACCCACAGTGTGCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR TCA 90 bp | CGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAAGCACGCCCAGCAGGTTaGACTGCAGGATGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RALEDFWSVLPETHVGCQARPAG*TAGCLA Trigger: TGCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGC...TTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR TCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACCCACCGTGTCTCCTCTaGCGTGGGCGCGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYPPCLL*RGRGGR Trigger: TCTTCCACCGCGCCCACGTCAGAGGAGACACGGTGG...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTTTGGGCTGTTCAGTCTaGTCCTGGATGTGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSLGCSV*SWMCRG Trigger: GCCTCTGCACATCCAGGAGCAGACTGAACAGCCCAA...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCTTCAGCACCTGCCCTaGTGGGACATAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSLQHLP*WDIAAA Trigger: GGCTGCTGCTATGTCCCAGCAGGGCAGGTGCTGAAG...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCAGGGCTGGGCTGGGTTaGAGGATGACATCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSRAGLG*RMTSMA Trigger: TGCCATGGATGTCATCCTGCAACCCAGCCCAGCCCT...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | CGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAAGGCACAGATGGTGGCTaGCTGCAAGATCCCGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RALEDFWSVLPETHVGCQGTDGG*LQDPAN Trigger: GTTGGCGGGATCTTGCAGGCAGCCACCATCTGTGCC...TTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | ACTTCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTTCCTCATGGCCTGCTaGGCCGTCTCGCTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSRALEDFWSVLPETHVGFLMAC*AVSLNL Trigger: CAGGTTCAGCGAGACGGCGCAGCAGGCCATGAGGAA...GCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCTACCCCTCCCTCAGGTaGACGTTGATGGTATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLYPSLR*TLMVSS Trigger: ACTGGATACCATCAACGTGCACCTGAGGGAGGGGTA...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGAATTGGAGACAGGGATaGCGTTGGAAAGGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLNWRQG*RWKGPG Trigger: CCCAGGTCCTTTCCAACGGCATCCCTGTCTCCAATT...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCAGGTCAGCACATCCTTTaGGAAGAAGGTCGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPGQHIL*EEGRAG Trigger: ACCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACC...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGCCCCGGCAGTGATGGAGGCTGTAAAGTGGGGATaGTGCCTGGCTCAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: KQHSSMASASVPAPAVMEAVKWG*CLAQHT Trigger: CGTGTGCTGAGCCAGGCACCATCCCCACTTTACAGC...CTCCATCACTGCCGGGGCAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCATTCCACGCTGTAAAGTaGGGATGGTGCCTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPFHAVK*GWCLAQ Trigger: CTGAGCCAGGCACCATCCCCACTTTACAGCGTGGAA...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCATTCCACGCTGTAAAGTaGGGATGGTGCCTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVSGEQDAGPYRSHQPEPFHAVK*GWCLAQ Trigger: CTGAGCCAGGCACCATCCCCACTTTACAGCGTGGAA...TGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTTGGTCTTCTTGGACCTACCTGGCGGACAATaGCGGTCGAGGAGTAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPSRTSHGCDCLVFLDLPGGQ*RSRSSP Trigger: GGGGCTACTCCTCGACCGCCATTGTCCGCCAGGTAG...GTCCAAGAAGACCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCAAGGGCACCTGGGCGTaGAACTCAGACACCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSKGTWA*NSDTMS Trigger: GGACATGGTGTCTGAGTTCCACGCCCAGGTGCCCTT...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACTGTACCACGTGCCCTTaGGGAAGTAGCCCGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHCTTCP*GSSPSL Trigger: AAGTGACGGGCTACTTCCCCAAGGGCACGTGGTACA...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGCACTGCCCCTTGCTCTaGACAGCAGATCTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGHCPLL*TADLKD Trigger: ATCCTTCAGATCTGCTGTCCAGAGCAAGGGGCAGTG...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACAGGTAGAAAGGATGTaGCCCGTAGAGGTTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPQVERM*PVEVGT Trigger: GGTACCAACCTCTACGGGTCACATCCTTTCTACCTG...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTCCCAGTATGGAGGCATaGAGGGGTATCCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSPSMEA*RGIPQH Trigger: ATGTTGTGGGATACCCCTTCATGCCTCCATACTGGG...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCATGTCAGGGCTGTAGGTaGAATTGGAGACAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DVSGEQDAGPYRSHQPEPCQGCR*NWRQGC Trigger: GCATCCCTGTCTCCAATTTCACCTACAGCCCTGACA...TGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCATCCAGGTCATTCCATTaGACGTCCAGCGGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVSGEQDAGPYRSHQPEPSRSFH*TSSGKC Trigger: ACACTTCCCGCTGGACGTGCAATGGAATGACCTGGA...TGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTTCCAGGTCATTCCATTaGACGTCCAGCGGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSSRSFH*TSSGKC Trigger: ACACTTCCCGCTGGACGTGCAATGGAATGACCTGGA...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | GAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCTGACCCAGATGGTGGCTGCCTaGAAGATCCCGCCAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: EDFWSVLPETHVGCQSLTQMVAA*KIPPTT Trigger: GGTGGTTGGCGGGATCTTGCAGGCAGCCACCATCTG...GGTCAGGGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCGTCTGGCACAGAGTATaGAAGATGCTCCCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVRRAGRRSLQEPPARASVWHRV*KMLPRA Trigger: AGCTCTTGGGAGCATCTTGCATACTCTGTGCCAGAC...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCGGTCCACAGACCAGGTaGTGGGATCCTCAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSGPQTR*WDPQGT Trigger: AGTTCCCTGAGGATCCCAGCACCTGGTCTGTGGACC...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCATCCACTGACACCATCTaGATGTTGTACCACGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVSGEQDAGPYRSHQPEPSTDTI*MLYHVP Trigger: GGGCACGTGGTACAACATGCAGATGGTGTCAGTGGA...TGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGTACCCCTCCCTCAGGTaGACGTTGATGGTATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MCQESRTQVLTGATSQSQYPSLR*TLMVSS Trigger: ACTGGATACCATCAACGTGCACCTGAGGGAGGGGTA...CTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCGATGTGCAGAGGCCCTaGCTTGTAACCTTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSDVQRP*LVTFLV Trigger: CACCAGGAAGGTTACAAGCCAGGGCCTCTGCACATC...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGTAAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGCCCCGGCAGTGATGTGTTCAGTCTGCTCCTaGATGTGCAGAGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQHSSMASASVPAPAVMCSVCS*MCRGPG Trigger: GCCAGGGCCTCTGCACATCCAGGAGCAGACTGAACA...CATCACTGCCGGGGCAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACGTGTGGGTGCTTCTTTaGGCTGTTCAGTCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHVWVLL*AVQSAP Trigger: AGGAGCAGACTGAACAGCCCAAAGAAGCACCCACAC...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCACAGCACCTGCCCTGCTaGGACATAGCAGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDAQHLPC*DIAAAA Trigger: CGCGGCTGCTGCTATGTCCCAGCAGGGCAGGTGCTG...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGACTAAGGCAGTAAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGCAGCACCTGCCCTGCTaGGACATAGCAGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: MRTKAVNSTPPWPLLQFLQHLPC*DIAAAA Trigger: CGCGGCTGCTGCTATGTCCCAGCAGGGCAGGTGCTG...CAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTTACTGCCTTAGTCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACGGAAGAAGGTCGGGCTaGTACGGGTCAGGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYGRRSG*YGSGWL Trigger: CAGCCACCCTGACCCGTACCAGCCCGACCTTCTTCC...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACGCGGGAAGTGTGTCCTaGTCATGTTCTCCACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHAGSVS*SCSPLP Trigger: AGGTAGTGGAGAACATGACCAGGACACACTTCCCGC...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCAATCAGGGAAGGCGGTaGTTCCAGGCCAAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSNQGRR*FQAKPS Trigger: GGAAGGTTTGGCCTGGAACCACCGCCTTCCCTGATT...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGAGGTTGTAGTGTGTaGAGAGGAATTGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSGGCSV*RGIGGW Trigger: CCAGCCACCAATTCCTCTCCACACACTACAACCTCC...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTCGAAGGCCTTCCTCATaGCCTGCTGCGCCGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCRRPSS*PAAPSR Trigger: GCGAGACGGCGCAGCAGGCCATGAGGAAGGCCTTCG...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTCACTGCCCCTTGCTCTaGACAGCAGATCTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSHCPLL*TADLKD Trigger: ATCCTTCAGATCTGCTGTCCAGAGCAAGGGGCAGTG...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGTCCAAAGGGTTCCTCTaGGAATTCCACGCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTQVLTGATSQSQLKLPLSKGFL*EFHAVK Trigger: CTTTACAGCGTGGAATTCTCAGAGGAACCCTTTGGA...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGGTCTCAGGGTTGGTaGAATCAGGGAAGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGACSNTVGKAQRCVRRAGSQGW*NQGRRW Trigger: CCACCGCCTTCCCTGATTTCACCAACCCTGAGACCC...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCACACACAGCTCTTCTaGCGTGTCTCCTATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSHTQLF*RVSYEA Trigger: GGCTTCATAGGAGACACGTCAGAAGAGCTGTGTGTG...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | GAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCTGACCCATTGTGGTTCCGCATaGAGGGGTAGAAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDFWSVLPETHVGCQSLTHCGSA*RGRRPP Trigger: TGGGGGCCTTCTACCCCTTCATGCGGAACCACAATG...GGTCAGGGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGACATCCAGGTATTGTTaGACAACGCTCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QESRTQVLTGATSQSQLKTSRYC*TTLLGS Trigger: AGAGCCCAAGAGCGTTGTGCAACAATACCTGGATGT...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | TCCCATGGCTGTGACTGTTTGGTCTTCTTGGACCTTCCTGCTGCGGGGACAGGCTCCAGGTCATTCCATTaGACGTCCAGCGGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHGCDCLVFLDLPAAGTGSRSFH*TSSGKC Trigger: ACACTTCCCGCTGGACGTGCAATGGAATGACCTGGA...GCCTGTCCCCGCAGCAGGAAGGTCCAAGAAGACCAAACAGTCACAGCCATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| CDS-3UTR GCA 90 bp | TCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCCCAGCAGGTTGAACTaGAGGATGTCTGGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRALEDFWSVLPETHVGCPSRLN*RMSGTE Trigger: CTCTGTGCCAGACATCCTGCAGTTCAACCTGCTGGG...ACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACGCACATCACACTGTGTaGGTGCTTCTTTGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHAHHTV*VLLWAV Trigger: AACAGCCCAAAGAAGCACCCACACAGTGTGATGTGC...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGACTAAGGCAGTAAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGGGAAGAAGGTCGGGCTaGTACGGGTCAGGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRTKAVNSTPPWPLLQFLGRRSG*YGSGWL Trigger: CAGCCACCCTGACCCGTACCAGCCCGACCTTCTTCC...CAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTTACTGCCTTAGTCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAAGTGGGGATGGTGCCTaGCTCAGCACACGTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDASGDGA*LSTRGV Trigger: GACCCCACGTGTGCTGAGCCAGGCACCATCCCCACT...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGCCGAGGCCCCAGTATaGAGGCATGAAGGGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RGACSNTVGKAQRCVRRAAEAPV*RHEGVS Trigger: GGATACCCCTTCATGCCTCCATACTGGGGCCTCGGC...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCACTACCTGGCGGACAATaGCGGTCGAGGAGTAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDALPGGQ*RSRSSP Trigger: GGGGCTACTCCTCGACCGCCATTGTCCGCCAGGTAG...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCTCGGCAAAGCTGTCCTaGTTGAAGGTGAAGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESRTQVLTGATSQSQLKLSAKLS*LKVKSL Trigger: AAGAGACTTCACCTTCAACCAGGACAGCTTTGCCGA...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCTCTCCAGTTCATTGTTaGGGCAGCCCTGCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSSPVHC*GSPAES Trigger: GCTCTCAGCAGGGCTGCCCCAACAATGAACTGGAGA...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCTGTGTGGAGAGGAATTaGTGGCTGGAGGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSCVERN*WLEAQM Trigger: CATCTGTGCCTCCAGCCACCAATTCCTCTCCACACA...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCGGAGGTTGTAGTGTGTaGAGAGGAATTGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMCQESRTQVLTGATSQSGGCSV*RGIGGW Trigger: CCAGCCACCAATTCCTCTCCACACACTACAACCTCC...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACTCCAAAGGGTTCCTCTaGGAATTCCACGCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHSKGFL*EFHAVK Trigger: CTTTACAGCGTGGAATTCTCAGAGGAACCCTTTGGA...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGCACGCCCAGCAGGTTaGACTGCAGGATGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDAARPAG*TAGCLA Trigger: TGCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGC...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACCATTGTGGTTCCGCATaGAGGGGTAGAAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYHCGSA*RGRRPP Trigger: TGGGGGCCTTCTACCCCTTCATGCGGAACCACAATG...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACTCTTGGCTGAGAAGGTaGCCAGTGTGTAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYSWLRR*PVCRPH Trigger: GTGGGGCCTACACACTGGTCACCTTCTCAGCCAAGA...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGGGTATTGTTCTTGGCTaGGAAGGTGACCAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MCQESRTQVLTGATSQSQGIVLG*EGDQCV Trigger: TACACACTGGTCACCTTCTCAGCCAAGAACAATACC...CTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGTATTGTTCTTGGCTaGGAAGGTGACCAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGNLVKAPALSLQGCGCSGIVLG*EGDQCV Trigger: TACACACTGGTCACCTTCTCAGCCAAGAACAATACC...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCAACATCCAGGTATTGTTaGACAACGCTCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAAAVAAQPDVGADTMSPTSRYC*TTLLGS Trigger: AGAGCCCAAGAGCGTTGTGCAACAATACCTGGATGT...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCACAGATGGTGGCTGCCTaGAAGATCCCGCCAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDAQMVAA*KIPPTT Trigger: GGTGGTTGGCGGGATCTTGCAGGCAGCCACCATCTG...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCAATTGGAGACAGGGATaGCGTTGGAAAGGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSNWRQG*RWKGPG Trigger: CCCAGGTCCTTTCCAACGGCATCCCTGTCTCCAATT...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGAACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGAAGGCCTGTGATGTGCTaGGAGGGCAGGGAAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTQSFRGACSNTVGKAQRRPVMC*EGREVD Trigger: GTCCACTTCCCTGCCCTCCCAGCACATCACAGGCCT...TCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGAACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGAGCCGAGGCCCCAGTATaGAGGCATGAAGGGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQSFRGACSNTVGKAQRAEAPV*RHEGVS Trigger: GGATACCCCTTCATGCCTCCATACTGGGGCCTCGGC...TCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACTCGGCAAAGCTGTCCTaGTTGAAGGTGAAGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHSAKLS*LKVKSL Trigger: AAGAGACTTCACCTTCAACCAGGACAGCTTTGCCGA...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | GCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCTCTCCAGTTCATTGTTaGGGCAGCCCTGCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALEDFWSVLPETHVGCQSSPVHC*GSPAES Trigger: GCTCTCAGCAGGGCTGCCCCAACAATGAACTGGAGA...GGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCTGTGTGGAGAGGAATTaGTGGCTGGAGGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSCVERN*WLEAQM Trigger: CATCTGTGCCTCCAGCCACCAATTCCTCTCCACACA...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTGTGGAGAGGAATTaGTGGCTGGAGGCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TSRALEDFWSVLPETHVGCVERN*WLEAQM Trigger: CATCTGTGCCTCCAGCCACCAATTCCTCTCCACACA...GCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCGGAGGTTGTAGTGTGTaGAGAGGAATTGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSRALEDFWSVLPETHVGGGCSV*RGIGGW Trigger: CCAGCCACCAATTCCTCTCCACACACTACAACCTCC...GCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACCCGTTGGAAAGGACCTaGGTAGGAGCTGTGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYPLERT*VGAVAT Trigger: AGTGGCCACAGCTCCTACCCAGGTCCTTTCCAACGG...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCACCGTTGGAAAGGACCTaGGTAGGAGCTGTGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RGACSNTVGKAQRCVRRAPLERT*VGAVAT Trigger: AGTGGCCACAGCTCCTACCCAGGTCCTTTCCAACGG...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTTTGGGGCAGCCCTGCTaGGAGCCTCTAACGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCLGQPC*EPLTKL Trigger: CAACTTCGTTAGAGGCTCTCAGCAGGGCTGCCCCAA...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | GCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCACACACAGCTCTTCTaGCGTGTCTCCTATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALEDFWSVLPETHVGCQSHTQLF*RVSYEA Trigger: GGCTTCATAGGAGACACGTCAGAAGAGCTGTGTGTG...GGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR TCA 90 bp | AGAACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGACATTGTGGTTCCGCATaGAGGGGTAGAAGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTQSFRGACSNTVGKAQRHCGSA*RGRRPP Trigger: TGGGGGCCTTCTACCCCTTCATGCGGAACCACAATG...TCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACTTGGGCTGTTCAGTCTaGTCCTGGATGTGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYLGCSV*SWMCRG Trigger: GCCTCTGCACATCCAGGAGCAGACTGAACAGCCCAA...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCATTCCCAATCAGCGGCTaGCCAGTCTCGTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RGACSNTVGKAQRCVRRAFPISG*PVSLVM Trigger: CATCACCAACGAGACTGGGCAGCCGCTGATTGGGAA...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCGTCTGGCACAGAGTATaGAAGATGCTCCCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSVWHRV*KMLPRA Trigger: AGCTCTTGGGAGCATCTTGCATACTCTGTGCCAGAC...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | TCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTGTCTGGCACAGAGTATaGAAGATGCTCCCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRALEDFWSVLPETHVGCVWHRV*KMLPRA Trigger: AGCTCTTGGGAGCATCTTGCATACTCTGTGCCAGAC...ACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGGTCCACAGACCAGGTaGTGGGATCCTCAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCGPQTR*WDPQGT Trigger: AGTTCCCTGAGGATCCCAGCACCTGGTCTGTGGACC...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCATGTTCAGTCTGCTCCTaGATGTGCAGAGGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDACSVCS*MCRGPG Trigger: GCCAGGGCCTCTGCACATCCAGGAGCAGACTGAACA...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCGCACATCACACTGTGTaGGTGCTTCTTTGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKMCQESRTQVLTGATSAHHTV*VLLWAV Trigger: AACAGCCCAAAGAAGCACCCACACAGTGTGATGTGC...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGCTGTAAAGTGGGGATaGTGCCTGGCTCAGCACACG | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCAVKWG*CLAQHT Trigger: CGTGTGCTGAGCCAGGCACCATCCCCACTTTACAGC...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGTTGCACAACGCTCTTaGGCTCTGGGCCTAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RGACSNTVGKAQRCVRRAVAQRS*ALGLGT Trigger: TGTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAAC...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGCGGGGACAGGCACAGGGCAAGTATGTTTCCTTCCCACATGGACATAGCGGGAAGTGTGTCCTaGTCATGTTCTCCACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SCCGDRHRASMFPSHMDIAGSVS*SCSPLP Trigger: AGGTAGTGGAGAACATGACCAGGACACACTTCCCGC...TATGTCCATGTGGGAAGGAAACATACTTGCCCTGTGCCTGTCCCCGCAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| CDS-3UTR TCA 90 bp | AGAACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGACCTGAAGAGGACTCATaGAGGTCTTGGGGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQSFRGACSNTVGKAQRPEEDS*RSWGSS Trigger: GCTGCTTCCCCAAGACCTTCATGAGTCCTCTTCAGG...TCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCACGTCTTCCACAGTCCTaGAGAGGACTCATGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGACSNTVGKAQRCVRRARLPQS*RGLMKV Trigger: GACCTTCATGAGTCCTCTTCAGGACTGTGGAAGACG...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | AGTAAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGCCCCGGCAGTGATGTCCAAAGGGTTCCTCTaGGAATTCCACGCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKQHSSMASASVPAPAVMSKGFL*EFHAVK Trigger: CTTTACAGCGTGGAATTCTCAGAGGAACCCTTTGGA...CATCACTGCCGGGGCAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR TCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACCAGGTAGAAAGGATGTaGCCCGTAGAGGTTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYQVERM*PVEVGT Trigger: GGTACCAACCTCTACGGGTCACATCCTTTCTACCTG...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGCTGGGTTGCAGGATaGCATCCATGGCATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDAGWVAG*HPWHCC Trigger: ACAGCAATGCCATGGATGTCATCCTGCAACCCAGCC...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACCACACACAGCTCTTCTaGCGTGTCTCCTATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYHTQLF*RVSYEA Trigger: GGCTTCATAGGAGACACGTCAGAAGAGCTGTGTGTG...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | AGAACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATTCCCAATCAGCGGCTaGCCAGTCTCGTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTQSFRGACSNTVGKAQRFPISG*PVSLVM Trigger: CATCACCAACGAGACTGGGCAGCCGCTGATTGGGAA...TCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | ATGAGGACTAAGGCAGTAAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGGATGTGCAGAGGCCCTaGCTTGTAACCTTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MRTKAVNSTPPWPLLQFLDVQRP*LVTFLV Trigger: CACCAGGAAGGTTACAAGCCAGGGCCTCTGCACATC...CAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTTACTGCCTTAGTCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACGTGTGGGTGCTTCTTTaGGCTGTTCAGTCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYVWVLL*AVQSAP Trigger: AGGAGCAGACTGAACAGCCCAAAGAAGCACCCACAC...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGGCTTAGCTCCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTTGGTCGGCAAAGCTGTCCTaGTTGAAGGTGAAGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQGLAPSPQGHPMAVTVWSAKLS*LKVKSL Trigger: AAGAGACTTCACCTTCAACCAGGACAGCTTTGCCGA...CCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGGAGCTAAGCCCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| CDS-3UTR TCA 90 bp | CATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCACCCAGTATGGAGGCATaGAGGGGTATCCCACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HAVTRWEKLKDVSGEQDAPSMEA*RGIPQH Trigger: ATGTTGTGGGATACCCCTTCATGCCTCCATACTGGG...TGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTTGTCAGGGCTGTAGGTaGAATTGGAGACAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCCQGCR*NWRQGC Trigger: GCATCCCTGTCTCCAATTTCACCTACAGCCCTGACA...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGGCAGGGTTTGGAATGAGGTAGACAGGTTTGCTGATTGCAGAAGCTCTCTTCAGCACCTGCCCTaGTGGGACATAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKGRVWNEVDRFADCRSSLQHLP*WDIAAA Trigger: GGCTGCTGCTATGTCCCAGCAGGGCAGGTGCTGAAG...AGAGCTTCTGCAATCAGCAAACCTGTCTACCTCATTCCAAACCCTGCCTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTTCCACTGACACCATCTaGATGTTGTACCACGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCSTDTI*MLYHVP Trigger: GGGCACGTGGTACAACATGCAGATGGTGTCAGTGGA...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCTTCCCCACGTGGCTTCTGTTCGTGTTTACCACAGCAACAGAAAACAATGGTACGGGTCAGGGTaGCTGTGTACCCCGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLPHVASVRVYHSNRKQWYGSG*LCTPTL Trigger: CAGAGTCGGGGTACACAGCCACCCTGACCCGTACCA...TTGTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAAGAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGCGGGAAGTGTGTCCTaGTCATGTTCTCCACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TQSFRGACSNTVGKAQRCAGSVS*SCSPLP Trigger: AGGTAGTGGAGAACATGACCAGGACACACTTCCCGC...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGCTAACTTGTTCACAATaGTATTGTTCTTGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGLTCSQ*YCSWLR Trigger: TCTCAGCCAAGAACAATACCATTGTGAACAAGTTAG...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CCA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACCTAACTTGTTCACAATaGTATTGTTCTTGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHLTCSQ*YCSWLR Trigger: TCTCAGCCAAGAACAATACCATTGTGAACAAGTTAG...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | TTCCCCACGTGGCTTCTGTTCGTGTTTACCACAGCAACAGAAAACAAGACAGAAGGTAGCTTGGGTAGCTaGGAGGGAAGAAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPTWLLFVFTTATENKTEGSLGS*EGRNTR Trigger: CCTGGTGTTTCTTCCCTCCCAGCTACCCAAGCTACC...TTCTGTCTTGTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCCACGTGGCTTCTGTTCGTGTTTACCACAGCAACAGAAAACAAGACAGAAGGTCAGCACATCCTTTaGGAAGAAGGTCGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPTWLLFVFTTATENKTEGQHIL*EEGRAG Trigger: ACCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACC...TTCTGTCTTGTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| CDS-3UTR GCA 90 bp | TTAAAAGTAAGTACACTTCACAGTAAGTTTCTCGAGTCTTGGGAACCTGGTGAATTCCTCATGGCCTGCTaGGCCGTCTCGCTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVSTLHSKFLESWEPGEFLMAC*AVSLNL Trigger: CAGGTTCAGCGAGACGGCGCAGCAGGCCATGAGGAA...TTCACCAGGTTCCCAAGACTCGAGAAACTTACTGTGAAGTGTACTTACTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTCCCCACGTGGCTTCTGTTCGTGTTTACCACAGCAACAGAAAACAAGGCACATCACACTGTGTaGGTGCTTCTTTGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFPTWLLFVFTTATENKAHHTV*VLLWAV Trigger: AACAGCCCAAAGAAGCACCCACACAGTGTGATGTGC...CTTGTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
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| CDS-3UTR TCA 90 bp | TTAAAAGTAAGTACACTTCACAGTAAGTTTCTCGAGTCTTGGGAACCTGGTGAAGGCTGGGTTGCAGGATaGCATCCATGGCATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKVSTLHSKFLESWEPGEGWVAG*HPWHCC Trigger: ACAGCAATGCCATGGATGTCATCCTGCAACCCAGCC...TTCACCAGGTTCCCAAGACTCGAGAAACTTACTGTGAAGTGTACTTACTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS CCA 90 bp | GGCTCAAGCACAGGTGTGATGAGCAGGGCCGGCCCCCACAAGAGCTaGCGGTCCACAGACCAGGTGCTGGGATCCTCAGGGAACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSTGVMSRAGPHKS*RSTDQVLGSSGNSR Trigger: CCTGGAGTTCCCTGAGGATCCCAGCACCTGGTCTGTGGACCGCCAGCTCTTGTGGGGGCCGGCCCTGCTCATCACACCTGTGCTTGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS TCA 90 bp | CCAACTGGGTCCAGCGCACACACAGCTCTTCTGACGTGTCTCCTATaGAGCCGCAGATGTCCGCCCCGACCAGGGGCACGCCCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PTGSSAHTALLTCLL*SRRCPPRPGARPAG Trigger: ACCTGCTGGGCGTGCCCCTGGTCGGGGCGGACATCTGCGGCTTCATAGGAGACACGTCAGAAGAGCTGTGTGTGCGCTGGACCCAGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
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| CDS GCA 90 bp | TCGGCCTCGCCGCTTGCTGTTAATGCCACAGCCAGAGCCATGGGCTaGTTTCGGGACTCCGTGGTTGTGAGGCTGGGACCCTGCAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SASPLAVNATARAMG*FRDSVVVRLGPCSG Trigger: ACCGCTGCAGGGTCCCAGCCTCACAACCACGGAGTCCCGAAAGCAGCCCATGGCTCTGGCTGTGGCATTAACAGCAAGCGGCGAGGCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS CCA 90 bp | GCGGGAAGTGTGTCCTGGTCATGTTCTCCACTACCTGGCGGACAATaGCGGTCGAGGAGTAGCCCCAGCGGCAGAGGTGGAAGCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSVSWSCSPLPGGQ*RSRSSPSGRGGSRG Trigger: GCCTCGGCTTCCACCTCTGCCGCTGGGGCTACTCCTCGACCGCCATTGTCCGCCAGGTAGTGGAGAACATGACCAGGACACACTTCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 ENSMUST00000150562.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCGTGTTCCCCGAGTCTaGACCAGGGCCCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QESRTQVLTGATSQSQLKRVPRV*TRALLE Trigger: CTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACACG...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS GCA 90 bp | TCAGGGAAGGCGGTGGTTCCAGGCCAAACCTTCCCAATCAGCGGCTaGCCAGTCTCGTTGGTGATGAACACGCCCCTCCGCAGACCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGKAVVPGQTFPISG*PVSLVMNTPLRRPS Trigger: CGAGGGTCTGCGGAGGGGCGTGTTCATCACCAACGAGACTGGGCAGCCGCTGATTGGGAAGGTTTGGCCTGGAACCACCGCCTTCCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
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| CDS GCA 90 bp | CAGCTCGTTACGGCCCCTGCCGCAGGCTTTAAGGCAGAGCAGTTCTaGGGATCCCGCCACGATCATCATGTAGCGCCGGCCATCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLVTAPAAGFKAEQF*GSRHDHHVAPAILV Trigger: CACCAGGATGGCCGGCGCTACATGATGATCGTGGCGGGATCCGCAGAACTGCTCTGCCTTAAAGCCTGCGGCAGGGGCCGTAACGAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
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| CDS-3UTR CAA 90 bp | ATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCGTGTTCCCCGAGTCTaGACCAGGGCCCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MCQESRTQVLTGATSQSQRVPRV*TRALLE Trigger: CTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACACG...CTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS TCA 90 bp | ATCCCCTGTCCAGTGACCAGCGTACCGGCCGTGGCCCGAGAAGGTTaGGCGGGAGATCACAAAGGGTCGTGTTCCCCGAGTCTTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IPCPVTSVPAVAREG*AGDHKGSCSPSLDQ Trigger: CTGGTCAAGACTCGGGGAACACGACCCTTTGTGATCTCCCGCTCAACCTTCTCGGGCCACGGCCGGTACGCTGGTCACTGGACAGGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
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| CDS TCA 90 bp | GAGTATGCAAGATGCTCCCAAGAGCTCCGCACATCCCCTGTCCAGTaGCCAGCGTACCGGCCGTGGCCCGAGAAGGTTGAGCGGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: EYARCSQELRTSPVQ*PAYRPWPEKVEREI Trigger: GATCTCCCGCTCAACCTTCTCGGGCCACGGCCGGTACGCTGGTCACTGGACAGGGGATGTGCGGAGCTCTTGGGAGCATCTTGCATACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
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| CDS-3UTR CAA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGCGTGGCCCGAGAAGGTaGAGCGGGAGATCACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGRGPRR*SGRSQR Trigger: CCTTTGTGATCTCCCGCTCAACCTTCTCGGGCCACG...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CAA 90 bp | CTTGGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCACGCCCAGCAGGTaGAACTGCAGGATGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGNLVKAPALSLQGCGCSGTPSR*NCRMSG Trigger: GCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGCC...ACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS GCA 90 bp | GTGAGGCTGGGACCCTGCAGCGGTATGATGTACCCCTCCCTCAGGTaGACGTTGATGGTATCCAGTGGGGCTTCCAGTGTCAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRLGPCSGMMYPSLR*TLMVSSGASSVSHC Trigger: GCAGTGGCTGACACTGGAAGCCCCACTGGATACCATCAACGTGCACCTGAGGGAGGGGTACATCATACCGCTGCAGGGTCCCAGCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CAA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCTGTTGCACAACGCTCTaGGGCTCTGGGCCTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESRTQVLTGATSQSQLKLCCTTL*GSGPRN Trigger: GTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAACA...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGGACTTCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCGTGGCCCGAGAAGGTaGAGCGGGAGATCACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGGTSRALEDFWSVLPETRGPRR*SGRSQR Trigger: CCTTTGTGATCTCCCGCTCAACCTTCTCGGGCCACG...CGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGAAGTCCCTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
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| CDS-3UTR CAA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGGAGACAGGGATGCCGTaGGAAAGGACCTGGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGETGMP*ERTWVG Trigger: TCCTACCCAGGTCCTTTCCAACGGCATCCCTGTCTC...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS TCA 90 bp | ACCGTGAGCCAAGCCACCGTCCTCCAGTGCCAGGTAGAAAGGATGTaGCCCGTAGAGGTTGGTACCTTGCGAGGGTGGTGTGTCCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVSQATVLQCQVERM*PVEVGTLRGWCVPV Trigger: AACCGGGACACACCACCCTCGCAAGGTACCAACCTCTACGGGTCACATCCTTTCTACCTGGCACTGGAGGACGGTGGCTTGGCTCACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS TCA 90 bp | AGCGTAAGGCGAAGGCCTTCCTCATGGCCTGCTGCGCCGTCTCGCTaGACCTGTACGGCTCCTGAGGCACGCTATTCAGGTCATTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVRRRPSSWPAAPSR*TCTAPEARYSGHCG Trigger: ACCACAATGACCTGAATAGCGTGCCTCAGGAGCCGTACAGGTTCAGCGAGACGGCGCAGCAGGCCATGAGGAAGGCCTTCGCCTTACGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
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| CDS CCA 90 bp | GCTCCTGTGAGATGCCTTTGTCGGGGGCACAGTCAAAGCGGCTGCTaGGGGGCACATCACACTGTGTGGGTGCTTCTTTGGGCTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: APVRCLCRGHSQSGC*GAHHTVWVLLWAVQ Trigger: CTGAACAGCCCAAAGAAGCACCCACACAGTGTGATGTGCCCCCCAGCAGCCGCTTTGACTGTGCCCCCGACAAAGGCATCTCACAGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
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| CDS CCA 90 bp | GGTTCGTTCATGTCGAGCCACATGCCATCGAAGGGCACCTGGGCGTaGAACTCAGACACCATGTCCTGCCACCAGTCAAGGGTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFMSSHMPSKGTWA*NSDTMSCHQSRVSG Trigger: CCCTGAGACCCTTGACTGGTGGCAGGACATGGTGTCTGAGTTCCACGCCCAGGTGCCCTTCGATGGCATGTGGCTCGACATGAACGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGTGTGTGGGTGCTTCTTaGGGCTGTTCAGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QESRTQVLTGATSQSQLKCVGAS*GCSVCS Trigger: GGAGCAGACTGAACAGCCCAAAGAAGCACCCACACA...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCTCTAGACGGTAGCTaGGGTAGCTGGGAGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVRRAGRRSLQEPPARASSLDGS*GSWEGR Trigger: TCTTCCCTCCCAGCTACCCAAGCTACCGTCTAGAGA...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACAGGTCAGCACATCCTTaGGGAAGAAGGTCGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHRSAHP*GRRSGW Trigger: CCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACCT...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGTAGAGGTTGGTACCTaGCGAGGGTGGTGTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MSPRRAPHSLVPGEGQTAVEVGT*RGWCVP Trigger: CGGGACACACCACCCTCGCAAGGTACCAACCTCTAC...AGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCATGTTGCACAACGCTCTaGGGCTCTGGGCCTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VAAAVAAQPDVGADTMSPCCTTL*GSGPRN Trigger: GTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAACA...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCGTGTGTGGAGAGGAATaGGTGGCTGGAGGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESRTQVLTGATSQSQLKLVCGEE*VAGGTD Trigger: ATCTGTGCCTCCAGCCACCAATTCCTCTCCACACAC...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCGTGTTCCCCGAGTCTaGACCAGGGCCCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALEDFWSVLPETHVGCQSRVPRV*TRALLE Trigger: CTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACACG...GGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTCGTGGCCCGAGAAGGTaGAGCGGGAGATCACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSPRRAPHSLVPGEGQTARGPRR*SGRSQR Trigger: CCTTTGTGATCTCCCGCTCAACCTTCTCGGGCCACG...AGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | ACTTCTCGGGCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCGGCACGCCCAGCAGGTaGAACTGCAGGATGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSRALEDFWSVLPETHVGGTPSR*NCRMSG Trigger: GCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGCC...GCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGCCCGAGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS TCA 90 bp | TGTACGGCTCCTGAGGCACGCTATTCAGGTCATTGTGGTTCCGCATaGAGGGGTAGAAGGCCCCCAACTGGGTCCAGCGCACACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CTAPEARYSGHCGSA*RGRRPPTGSSAHTA Trigger: AGCTGTGTGTGCGCTGGACCCAGTTGGGGGCCTTCTACCCCTTCATGCGGAACCACAATGACCTGAATAGCGTGCCTCAGGAGCCGTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS GCA 90 bp | ATGCCATCGAAGGGCACCTGGGCGTGGAACTCAGACACCATGTCCTaGCACCAGTCAAGGGTCTCAGGGTTGGTGAAATCAGGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MPSKGTWAWNSDTMS*HQSRVSGLVKSGKA Trigger: CGCCTTCCCTGATTTCACCAACCCTGAGACCCTTGACTGGTGGCAGGACATGGTGTCTGAGTTCCACGCCCAGGTGCCCTTCGATGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CCA 90 bp | CATCATGTAGCGCCGGCCATCCTGGTGCAGCTCCCGCACCATGTCTaGGAAGTCGGCAAAGCTGTCCTGGTTGAAGGTGAAGTCTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: HHVAPAILVQLPHHV*EVGKAVLVEGEVSS Trigger: CGAAGAGACTTCACCTTCAACCAGGACAGCTTTGCCGACTTCCCAGACATGGTGCGGGAGCTGCACCAGGATGGCCGGCGCTACATGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 ENSMUST00000150562.2 |
||
| CDS CCA 90 bp | TTGGACGGTTCGTTCATGTCGAGCCACATGCCATCGAAGGGCACCTaGGCGTGGAACTCAGACACCATGTCCTGCCACCAGTCAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDGSFMSSHMPSKGT*AWNSDTMSCHQSRV Trigger: GACCCTTGACTGGTGGCAGGACATGGTGTCTGAGTTCCACGCCCAGGTGCCCTTCGATGGCATGTGGCTCGACATGAACGAACCGTCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CCA 90 bp | CGTACAGGTTGTGGAGGTTGTAGTGTGTGGAGAGGAATTGGTGGCTaGAGGCACAGATGGTGGCTGCCTGCAAGATCCCGCCAACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RTGCGGCSVWRGIGG*RHRWWLPARSRQPP Trigger: GGGTGGTTGGCGGGATCTTGCAGGCAGCCACCATCTGTGCCTCCAGCCACCAATTCCTCTCCACACACTACAACCTCCACAACCTGTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGGCAAAGCTGTCCTGGTaGAAGGTGAAGTCTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGAKLSW*KVKSLR Trigger: CCGAAGAGACTTCACCTTCAACCAGGACAGCTTTGC...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGGCAAAGCTGTCCTGGTaGAAGGTGAAGTCTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QESRTQVLTGATSQSQLKAKLSW*KVKSLR Trigger: CCGAAGAGACTTCACCTTCAACCAGGACAGCTTTGC...CTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCGAGCCTCTAACGAAGTaGGACGGTTCGTTCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CVRRAGRRSLQEPPARASEPLTK*DGSFMS Trigger: CGACATGAACGAACCGTCCAACTTCGTTAGAGGCTC...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TCCCCACGCCGAGCTCCACATTCTCTAGTGCCAGGTGAGGGACAGACAGCTGGGACGCTATTCAGGTCATaGTGGTTCCGCATGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRAPHSLVPGEGQTAGTLFRS*WFRMKG Trigger: CCCCTTCATGCGGAACCACAATGACCTGAATAGCGT...CCCAGCTGTCTGTCCCTCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCGAGACAGGGATGCCGTaGGAAAGGACCTGGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KMCQESRTQVLTGATSQSETGMP*ERTWVG Trigger: TCCTACCCAGGTCCTTTCCAACGGCATCCCTGTCTC...GCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GGGAACCTGGTGAAGGCACCAGCTCTGTCTCTGCAGGGTTGCGGCTGCAGTGGCCTAGGACCAGCTGATTaGAAACAGCTCTCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GNLVKAPALSLQGCGCSGLGPAD*KQLSHQ Trigger: CTGATGGGAGAGCTGTTTCAAATCAGCTGGTCCTAG...GCCACTGCAGCCGCAACCCTGCAGAGACAGAGCTGGTGCCTTCACCAGGTTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCAACATCCAGGTATTGTaGCACAACGCTCTTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CVRRAGRRSLQEPPARASNIQVL*HNALGL Trigger: GAGCCCAAGAGCGTTGTGCAACAATACCTGGATGTT...GCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACGAGCCTCTAACGAAGTaGGACGGTTCGTTCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHEPLTK*DGSFMS Trigger: CGACATGAACGAACCGTCCAACTTCGTTAGAGGCTC...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGCACGCCCAGCAGGTaGAACTGCAGGATGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGACSNTVGKAQRCVRRAGTPSR*NCRMSG Trigger: GCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGCC...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS TCA 90 bp | GGGCTTCCAGTGTCAGCCACTGCCCCTTGCTCTGGACAGCAGATCTaGAGGATGAAGCCGATGATGGAGAAGGGAGAGTACCGAGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLPVSATAPCSGQQI*RMKPMMEKGEYRGN Trigger: ATTCCCTCGGTACTCTCCCTTCTCCATCATCGGCTTCATCCTTCAGATCTGCTGTCCAGAGCAAGGGGCAGTGGCTGACACTGGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS GCA 90 bp | TCCAGGATCCCGCCCGTTGACCTCCAGGTTAGGGCTGGGCTGGGTTaGAGGATGACATCTGGAAAGAAGTGTTTGGGCTCAGGAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRIPPVDLQVRAGLG*RMTSGKKCLGSGTS Trigger: ACTTGTTCCTGAGCCCAAACACTTCTTTCCAGATGTCATCCTGCAACCCAGCCCAGCCCTAACCTGGAGGTCAACGGGCGGGATCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132706.8 |
||
| CDS CCA 90 bp | TGCTTCTTTGGGCTGTTCAGTCTGCTCCTGGATGTGCAGAGGCCCTaGCTTGTAACCTTCCTGGTGGTGAGGTCGGTACGTCTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CFFGLFSLLLDVQRP*LVTFLVVRSVRLPQ Trigger: CTGTGGAAGACGTACCGACCTCACCACCAGGAAGGTTACAAGCCAGGGCCTCTGCACATCCAGGAGCAGACTGAACAGCCCAAAGAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS CCA 90 bp | GAATTCCACGCTGTAAAGTGGGGATGGTGCCTGGCTCAGCACACGTaGGGTCTCCAGGGGCACTTCGTAGCGCTTACTAGCAGGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EFHAVKWGWCLAQHT*GLQGHFVALTSRIF Trigger: AAAGATCCTGCTAGTAAGCGCTACGAAGTGCCCCTGGAGACCCCACGTGTGCTGAGCCAGGCACCATCCCCACTTTACAGCGTGGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCTGTGTGGGTGCTTCTTaGGGCTGTTCAGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKMCQESRTQVLTGATSCVGAS*GCSVCS Trigger: GGAGCAGACTGAACAGCCCAAAGAAGCACCCACACA...GCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACGTCAGCCACTGCCCCTaGCTCTGGACAGCAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYVSHCP*LWTADL Trigger: CAGATCTGCTGTCCAGAGCAAGGGGCAGTGGCTGAC...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGTCAGCCACTGCCCCTaGCTCTGGACAGCAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGACSNTVGKAQRCVRRAVSHCP*LWTADL Trigger: CAGATCTGCTGTCCAGAGCAAGGGGCAGTGGCTGAC...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACTAGGACCAGCTGATTaGAAACAGCTCTCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VAAAVAAQPDVGADTMSPLGPAD*KQLSHQ Trigger: CTGATGGGAGAGCTGTTTCAAATCAGCTGGTCCTAG...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS TCA 90 bp | TCGGCCACCAAGCTTCCTACGAACGATCACTCCAAAGGGTTCCTCTaGGAATTCCACGCTGTAAAGTGGGGATGGTGCCTGGCTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SATKLPTNDHSKGFL*EFHAVKWGWCLAQH Trigger: GTGCTGAGCCAGGCACCATCCCCACTTTACAGCGTGGAATTCTCAGAGGAACCCTTTGGAGTGATCGTTCGTAGGAAGCTTGGTGGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS TCA 90 bp | ACTCAGACACCATGTCCTGCCACCAGTCAAGGGTCTCAGGGTTGGTaGAATCAGGGAAGGCGGTGGTTCCAGGCCAAACCTTCCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: TQTPCPATSQGSQGW*NQGRRWFQAKPSQS Trigger: TGATTGGGAAGGTTTGGCCTGGAACCACCGCCTTCCCTGATTTCACCAACCCTGAGACCCTTGACTGGTGGCAGGACATGGTGTCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CCA 90 bp | CGAGGGAATCCACTGACACCATCTGCATGTTGTACCACGTGCCCTTaGGGAAGTAGCCCGTCACTTCAGTTTTCCCAGGCTCAAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGNPLTPSACCTTCP*GSSPSLQFSQAQAQ Trigger: CTGTGCTTGAGCCTGGGAAAACTGAAGTGACGGGCTACTTCCCCAAGGGCACGTGGTACAACATGCAGATGGTGTCAGTGGATTCCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGGCTTAGCTCCCTCCCCTCAAGGACATCCCATGGCTGTGACTGTTTGGGCAAAGCTGTCCTGGTaGAAGGTGAAGTCTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FQGLAPSPQGHPMAVTVWAKLSW*KVKSLR Trigger: CCGAAGAGACTTCACCTTCAACCAGGACAGCTTTGC...CCAAACAGTCACAGCCATGGGATGTCCTTGAGGGGAGGGAGCTAAGCCCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150562.2 |
||
| CDS-3UTR CAA 90 bp | GAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCCTGACCGTGTGTGGAGAGGAATaGGTGGCTGGAGGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EDFWSVLPETHVGCQSLTVCGEE*VAGGTD Trigger: ATCTGTGCCTCCAGCCACCAATTCCTCTCCACACAC...GGTCAGGGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS GCA 90 bp | GAGTACCGAGGGAATCCACTGACACCATCTGCATGTTGTACCACGTaGCCTTGGGGAAGTAGCCCGTCACTTCAGTTTTCCCAGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: EYRGNPLTPSACCTT*PWGSSPSLQFSQAQ Trigger: TTGAGCCTGGGAAAACTGAAGTGACGGGCTACTTCCCCAAGGGCACGTGGTACAACATGCAGATGGTGTCAGTGGATTCCCTCGGTACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGATGACATCCATGGCATaGCTGTTTAGCAAGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RTQVLTGATSQSQLKLPLMTSMA*LFSKKT Trigger: TGTCTTCTTGCTAAACAGCAATGCCATGGATGTCAT...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCATGACATCCATGGCATaGCTGTTTAGCAAGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESRTQVLTGATSQSQLKLMTSMA*LFSKKT Trigger: TGTCTTCTTGCTAAACAGCAATGCCATGGATGTCAT...GAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGTGTGTGGAGAGGAATaGGTGGCTGGAGGCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGACSNTVGKAQRCVRRAVCGEE*VAGGTD Trigger: ATCTGTGCCTCCAGCCACCAATTCCTCTCCACACAC...TGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GCACTGGAAGACTTCTGGTCAGTCCTCCCTGAGACGCATGTAGGCTGTCAATCCACGCTATTCAGGTCATaGTGGTTCCGCATGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALEDFWSVLPETHVGCQSTLFRS*WFRMKG Trigger: CCCCTTCATGCGGAACCACAATGACCTGAATAGCGT...GGATTGACAGCCTACATGCGTCTCAGGGAGGACTGACCAGAAGTCTTCCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143288.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCAGGAGAGCAGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGACAATGGTATTGTTCTaGGCTGAGAAGGTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MCQESRTQVLTGATSQSQTMVLF*AEKVTS Trigger: ACTGGTCACCTTCTCAGCCAAGAACAATACCATTGT...CTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCTGCTCTCCTGACACAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCACACAATGGTATTGTTCTaGGCTGAGAAGGTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRLQWLHSLMLVQTRCPHTMVLF*AEKVTS Trigger: ACTGGTCACCTTCTCAGCCAAGAACAATACCATTGT...GTGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | AGGACGCAGGTCCTTACAGGAGCCACCAGCCAGAGCCAGCTCAAGCTCCCTCTGTTGTTCACAATGGTATaGTTCTTGGCTGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTQVLTGATSQSQLKLPLLFTMV*FLAEKV Trigger: CACCTTCTCAGCCAAGAACAATACCATTGTGAACAA...CAGAGGGAGCTTGAGCTGGCTCTGGCTGGTGGCTCCTGTAAGGACCTGCGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGGACTAAGGCAGTAAACAGCACTCCTCCATGGCCTCTGCTTCAGTTCCTGTCTCTAGACGGTAGCTaGGGTAGCTGGGAGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MRTKAVNSTPPWPLLQFLSLDGS*GSWEGR Trigger: TCTTCCCTCCCAGCTACCCAAGCTACCGTCTAGAGA...CAGGAACTGAAGCAGAGGCCATGGAGGAGTGCTGTTTACTGCCTTAGTCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCGGCTGCAGTGGCTGCACAGCCTGATGTTGGTGCAGACACGATGTCCCCATTGTTCACAATGGTATaGTTCTTGGCTGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VAAAVAAQPDVGADTMSPLFTMV*FLAEKV Trigger: CACCTTCTCAGCCAAGAACAATACCATTGTGAACAA...TGGGGACATCGTGTCTGCACCAACATCAGGCTGTGCAGCCACTGCAGCCGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS GCA 90 bp | CAGTATGGAGGCATGAAGGGGTATCCCACAACATCCAGGTATTGTTaGACAACGCTCTTGGGCTCTGGGCCTAGGAACACATACACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QYGGMKGYPTTSRYC*TTLLGSGPRNTYTS Trigger: GGATGTGTATGTGTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAACAATACCTGGATGTTGTGGGATACCCCTTCATGCCTCCATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS-3UTR CAA 90 bp | ACACGGTGGGAAAAGCTCAAAGATGTGTCAGGAGAGCAGGACGCAGGTCCTTACCACAACATCCAGGTATaGTTGCACAACGCTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRWEKLKDVSGEQDAGPYHNIQV*LHNALG Trigger: CCCAAGAGCGTTGTGCAACAATACCTGGATGTTGTG...GTAAGGACCTGCGTCCTGCTCTCCTGACACATCTTTGAGCTTTTCCCACCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTACGCTATTCAGGTCATaGTGGTTCCGCATGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQSFRGACSNTVGKAQRCTLFRS*WFRMKG Trigger: CCCCTTCATGCGGAACCACAATGACCTGAATAGCGT...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTTCCCCACGTGGCTTCTGTTCGTGTTTACCACAGCAACAGAAAACAAGAGGTCAGCACATCCTTaGGGAAGAAGGTCGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLFPTWLLFVFTTATENKRSAHP*GRRSGW Trigger: CCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACCT...CTTGTTTTCTGTTGCTGTGGTAAACACGAACAGAAGCCACGTGGGGAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGCTTCAGGGGCGCATGCAGTAACACGGTGGGAAAAGCTCAAAGATGTCACAACATCCAGGTATaGTTGCACAACGCTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQSFRGACSNTVGKAQRCHNIQV*LHNALG Trigger: CCCAAGAGCGTTGTGCAACAATACCTGGATGTTGTG...ACATCTTTGAGCTTTTCCCACCGTGTTACTGCATGCGCCCCTGAAGCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGGCAGGGTTTGGAATGAGGTAGACAGGTTTGCTGATTGCAGAAGCTCTTGTGTGGGTGCTTCTTaGGGCTGTTCAGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKGRVWNEVDRFADCRSSCVGAS*GCSVCS Trigger: GGAGCAGACTGAACAGCCCAAAGAAGCACCCACACA...AGAGCTTCTGCAATCAGCAAACCTGTCTACCTCATTCCAAACCCTGCCTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106258.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAAGTAAGTACACTTCACAGTAAGTTTCTCGAGTCTTGGGAACCTGGTGAAGTAGAGGTTGGTACCTaGCGAGGGTGGTGTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LKVSTLHSKFLESWEPGEVEVGT*RGWCVP Trigger: CGGGACACACCACCCTCGCAAGGTACCAACCTCTAC...TTCACCAGGTTCCCAAGACTCGAGAAACTTACTGTGAAGTGTACTTACTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAAGTAAGTACACTTCACAGTAAGTTTCTCGAGTCTTGGGAACCTGGTGAAAGGTCAGCACATCCTTaGGGAAGAAGGTCGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVSTLHSKFLESWEPGERSAHP*GRRSGW Trigger: CCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACCT...TTCACCAGGTTCCCAAGACTCGAGAAACTTACTGTGAAGTGTACTTACTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS GCA 72 bp | GGGCTGCCCTATCTGCGGCTCCTTCAGCACCTGCCCTaGTGGGACATAGCAGCAGCCGCGGGCCTCGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPYLRLLQHLP*WDIAAAAGLAL Trigger: CAATGCGAGGCCCGCGGCTGCTGCTATGTCCCAGCAGGGCAGGTGCTGAAGGAGCCGCAGATAGGGCAGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | ACAGGTGTGATGAGCAGGGCCGGCCCCCACAAGAGCTaGCGGTCCACAGACCAGGTGCTGGGATCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGVMSRAGPHKS*RSTDQVLGSSG Trigger: CCCTGAGGATCCCAGCACCTGGTCTGTGGACCGCCAGCTCTTGTGGGGGCCGGCCCTGCTCATCACACCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS TCA 72 bp | CGTAGGGCCTGTAACTCCCAGCAGGGCCTGCGCTGCTaGTGGCAGGGTCCACGATCATCATGTAGCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRACNSQQGLRC*WQGPRSSCSAG Trigger: GCCGGCGCTACATGATGATCGTGGACCCTGCCATCAGCAGCGCAGGCCCTGCTGGGAGTTACAGGCCCTACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS GCA 72 bp | AGCAGCAGCCGCGGGCCTCGCATTGCTCCTGTGAGATaGCTTTGTCGGGGGCACAGTCAAAGCGGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSRGPRIAPVR*LCRGHSQSGCW Trigger: CCAGCAGCCGCTTTGACTGTGCCCCCGACAAAGGCATCTCACAGGAGCAATGCGAGGCCCGCGGCTGCTGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS TCA 72 bp | CCAGTGACCAGCGTACCGGCCGTGGCCCGAGAAGGTTaGGCGGGAGATCACAAAGGGTCGTGTTCCCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PVTSVPAVAREG*AGDHKGSCSPS Trigger: ACTCGGGGAACACGACCCTTTGTGATCTCCCGCTCAACCTTCTCGGGCCACGGCCGGTACGCTGGTCACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS TCA 72 bp | AGATGCTCCCAAGAGCTCCGCACATCCCCTGTCCAGTaGCCAGCGTACCGGCCGTGGCCCGAGAAGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCSQELRTSPVQ*PAYRPWPEKVE Trigger: CTCAACCTTCTCGGGCCACGGCCGGTACGCTGGTCACTGGACAGGGGATGTGCGGAGCTCTTGGGAGCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS TCA 72 bp | TCCAGCGCACACACAGCTCTTCTGACGTGTCTCCTATaGAGCCGCAGATGTCCGCCCCGACCAGGGGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAHTALLTCLL*SRRCPPRPGAR Trigger: GCGTGCCCCTGGTCGGGGCGGACATCTGCGGCTTCATAGGAGACACGTCAGAAGAGCTGTGTGTGCGCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS TCA 72 bp | GGCCCCCAACTGGGTCCAGCGCACACACAGCTCTTCTaGCGTGTCTCCTATGAAGCCGCAGATGTCCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPQLGPAHTQLF*RVSYEAADVRP Trigger: GGGGCGGACATCTGCGGCTTCATAGGAGACACGTCAGAAGAGCTGTGTGTGCGCTGGACCCAGTTGGGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS GCA 72 bp | GCGGTGGTTCCAGGCCAAACCTTCCCAATCAGCGGCTaGCCAGTCTCGTTGGTGATGAACACGCCCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AVVPGQTFPISG*PVSLVMNTPLR Trigger: GCGGAGGGGCGTGTTCATCACCAACGAGACTGGGCAGCCGCTGATTGGGAAGGTTTGGCCTGGAACCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CAA 72 bp | GGCCAAACCTTCCCAATCAGCGGCTGCCCAGTCTCGTaGGTGATGAACACGCCCCTCCGCAGACCCTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GQTFPISGCPVS*VMNTPLRRPSS Trigger: CGACGAGGGTCTGCGGAGGGGCGTGTTCATCACCAACGAGACTGGGCAGCCGCTGATTGGGAAGGTTTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CAA 72 bp | TCCAGTGACCAGCGTACCGGCCGTGGCCCGAGAAGGTaGAGCGGGAGATCACAAAGGGTCGTGTTCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSDQRTGRGPRR*SGRSQRVVFPE Trigger: CTCGGGGAACACGACCCTTTGTGATCTCCCGCTCAACCTTCTCGGGCCACGGCCGGTACGCTGGTCACTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS TCA 72 bp | GACATAGCAGCAGCCGCGGGCCTCGCATTGCTCCTGTaGGATGCCTTTGTCGGGGGCACAGTCAAAGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DIAAAAGLALLL*DAFVGGTVKAA Trigger: AGCCGCTTTGACTGTGCCCCCGACAAAGGCATCTCACAGGAGCAATGCGAGGCCCGCGGCTGCTGCTATGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS TCA 72 bp | CGAAGGCCTTCCTCATGGCCTGCTGCGCCGTCTCGCTaGACCTGTACGGCTCCTGAGGCACGCTATTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRPSSWPAAPSR*TCTAPEARYSG Trigger: ACCTGAATAGCGTGCCTCAGGAGCCGTACAGGTTCAGCGAGACGGCGCAGCAGGCCATGAGGAAGGCCTTCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS GCA 72 bp | GGAGAGGAATTGGTGGCTGGAGGCACAGATGGTGGCTaGCTGCAAGATCCCGCCAACCACCCCGGGCACATA | + |
|
Preference number: 6 (lower is better) Translates to: GEELVAGGTDGG*LQDPANHPGHI Trigger: TATGTGCCCGGGGTGGTTGGCGGGATCTTGCAGGCAGCCACCATCTGTGCCTCCAGCCACCAATTCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 ENSMUST00000143288.2 |
||
| CDS GCA 72 bp | TGCTTTCGGGACTCCGTGGTTGTGAGGCTGGGACCCTaGAGCGGTATGATGTACCCCTCCCTCAGGTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: CFRDSVVVRLGP*SGMMYPSLRCT Trigger: CGTGCACCTGAGGGAGGGGTACATCATACCGCTGCAGGGTCCCAGCCTCACAACCACGGAGTCCCGAAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS GCA 72 bp | CCGCTTGCTGTTAATGCCACAGCCAGAGCCATGGGCTaGTTTCGGGACTCCGTGGTTGTGAGGCTGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: PLAVNATARAMG*FRDSVVVRLGP Trigger: GGGTCCCAGCCTCACAACCACGGAGTCCCGAAAGCAGCCCATGGCTCTGGCTGTGGCATTAACAGCAAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | GCGCCGGCCATCCTGGTGCAGCTCCCGCACCATGTCTaGGAAGTCGGCAAAGCTGTCCTGGTTGAAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: APAILVQLPHHV*EVGKAVLVEGE Trigger: TTCACCTTCAACCAGGACAGCTTTGCCGACTTCCCAGACATGGTGCGGGAGCTGCACCAGGATGGCCGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 ENSMUST00000150562.2 |
||
| CDS TCA 72 bp | GCCTGCTGCGCCGTCTCGCTGAACCTGTACGGCTCCTaGGGCACGCTATTCAGGTCATTGTGGTTCCGCATG | + |
|
Preference number: 6 (lower is better) Translates to: ACCAVSLNLYGS*GTLFRSLWFRM Trigger: CATGCGGAACCACAATGACCTGAATAGCGTGCCTCAGGAGCCGTACAGGTTCAGCGAGACGGCGCAGCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS CCA 72 bp | GTACCCCTCCCTCAGGTGCACGTTGATGGTATCCAGTaGGGCTTCCAGTGTCAGCCACTGCCCCTTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPLPQVHVDGIQ*GFQCQPLPLAL Trigger: CAGAGCAAGGGGCAGTGGCTGACACTGGAAGCCCCACTGGATACCATCAACGTGCACCTGAGGGAGGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS CAA 72 bp | GGCCTAGGAACACATACACATCCAGGATCCCGCCCGTaGACCTCCAGGTTAGGGCTGGGCTGGGTTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLGTHTHPGSRP*TSRLGLGWVAG Trigger: TCCTGCAACCCAGCCCAGCCCTAACCTGGAGGTCAACGGGCGGGATCCTGGATGTGTATGTGTTCCTAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CAA 72 bp | CAGATGTCCGCCCCGACCAGGGGCACGCCCAGCAGGTaGAACTGCAGGATGTCTGGCACAGAGTATGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QMSAPTRGTPSR*NCRMSGTEYAR Trigger: TCTTGCATACTCTGTGCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGCCCCTGGTCGGGGCGGACATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS CAA 90 bp | GAGAAGGTTGAGCGGGAGATCACAAAGGGTCGTGTTCCCCGAGTCTaGACCAGGGCCCTGCTGGAGGCGATAGCTTCAGTGAGGCCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: EKVEREITKGRVPRV*TRALLEAIASVRPY Trigger: GTACGGCCTCACTGAAGCTATCGCCTCCAGCAGGGCCCTGGTCAAGACTCGGGGAACACGACCCTTTGTGATCTCCCGCTCAACCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS CAA 90 bp | ATGAAGCCGCAGATGTCCGCCCCGACCAGGGGCACGCCCAGCAGGTaGAACTGCAGGATGTCTGGCACAGAGTATGCAAGATGCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: MKPQMSAPTRGTPSR*NCRMSGTEYARCSQ Trigger: TTGGGAGCATCTTGCATACTCTGTGCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGCCCCTGGTCGGGGCGGACATCTGCGGCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS TCA 72 bp | AGATGTCCGCCCCGACCAGGGGCACGCCCAGCAGGTTaGACTGCAGGATGTCTGGCACAGAGTATGCAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RCPPRPGARPAG*TAGCLAQSMQD Trigger: ATCTTGCATACTCTGTGCCAGACATCCTGCAGTTCAACCTGCTGGGCGTGCCCCTGGTCGGGGCGGACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS TCA 72 bp | CCTGAGGCACGCTATTCAGGTCATTGTGGTTCCGCATaGAGGGGTAGAAGGCCCCCAACTGGGTCCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PEARYSGHCGSA*RGRRPPTGSSA Trigger: TGCGCTGGACCCAGTTGGGGGCCTTCTACCCCTTCATGCGGAACCACAATGACCTGAATAGCGTGCCTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS CCA 72 bp | GGGCTGTTCAGTCTGCTCCTGGATGTGCAGAGGCCCTaGCTTGTAACCTTCCTGGTGGTGAGGTCGGTACGT | + |
|
Preference number: 6 (lower is better) Translates to: GLFSLLLDVQRP*LVTFLVVRSVR Trigger: ACGTACCGACCTCACCACCAGGAAGGTTACAAGCCAGGGCCTCTGCACATCCAGGAGCAGACTGAACAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | AGATGCCTTTGTCGGGGGCACAGTCAAAGCGGCTGCTaGGGGGCACATCACACTGTGTGGGTGCTTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RCLCRGHSQSGC*GAHHTVWVLLW Trigger: CCAAAGAAGCACCCACACAGTGTGATGTGCCCCCCAGCAGCCGCTTTGACTGTGCCCCCGACAAAGGCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | GTAAGGTCAGCACATCCTTTGGGAAGAAGGTCGGGCTaGTACGGGTCAGGGTGGCTGTGTACCCCGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRSAHPLGRRSG*YGSGWLCTPTL Trigger: CAGAGTCGGGGTACACAGCCACCCTGACCCGTACCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | ATGTCGAGCCACATGCCATCGAAGGGCACCTGGGCGTaGAACTCAGACACCATGTCCTGCCACCAGTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MSSHMPSKGTWA*NSDTMSCHQSR Trigger: CCTTGACTGGTGGCAGGACATGGTGTCTGAGTTCCACGCCCAGGTGCCCTTCGATGGCATGTGGCTCGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS CAA 72 bp | CCATCAGCACCTCCAGCTGTAAGGTCAGCACATCCTTaGGGAAGAAGGTCGGGCTGGTACGGGTCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSAPPAVRSAHP*GRRSGWYGSGW Trigger: CCACCCTGACCCGTACCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACCTTACAGCTGGAGGTGCTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS CAA 90 bp | AGTGAGGCCGTACAGGTTGTGGAGGTTGTAGTGTGTGGAGAGGAATaGGTGGCTGGAGGCACAGATGGTGGCTGCCTGCAAGATCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SEAVQVVEVVVCGEE*VAGGTDGGCLQDPA Trigger: GGCGGGATCTTGCAGGCAGCCACCATCTGTGCCTCCAGCCACCAATTCCTCTCCACACACTACAACCTCCACAACCTGTACGGCCTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
||
| CDS CAA 90 bp | TGTCTGTCTCCATCAGCACCTCCAGCTGTAAGGTCAGCACATCCTTaGGGAAGAAGGTCGGGCTGGTACGGGTCAGGGTGGCTGTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: CLSPSAPPAVRSAHP*GRRSGWYGSGWLCT Trigger: GGTACACAGCCACCCTGACCCGTACCAGCCCGACCTTCTTCCCAAAGGATGTGCTGACCTTACAGCTGGAGGTGCTGATGGAGACAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
||
| CDS TCA 72 bp | CAAGCCACCGTCCTCCAGTGCCAGGTAGAAAGGATGTaGCCCGTAGAGGTTGGTACCTTGCGAGGGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QATVLQCQVERM*PVEVGTLRGWC Trigger: ACACCACCCTCGCAAGGTACCAACCTCTACGGGTCACATCCTTTCTACCTGGCACTGGAGGACGGTGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS TCA 72 bp | CCATGTCCTGCCACCAGTCAAGGGTCTCAGGGTTGGTaGAATCAGGGAAGGCGGTGGTTCCAGGCCAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: PCPATSQGSQGW*NQGRRWFQAKP Trigger: AGGTTTGGCCTGGAACCACCGCCTTCCCTGATTTCACCAACCCTGAGACCCTTGACTGGTGGCAGGACATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS GCA 72 bp | CCGCCCGTTGACCTCCAGGTTAGGGCTGGGCTGGGTTaGAGGATGACATCCATGGCATTGCTGTTTAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPVDLQVRAGLG*RMTSMALLFSK Trigger: CTTGCTAAACAGCAATGCCATGGATGTCATCCTGCAACCCAGCCCAGCCCTAACCTGGAGGTCAACGGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | CCAGTGCCAGGTAGAAAGGATGTGACCCGTAGAGGTTaGTACCTTGCGAGGGTGGTGTGTCCCGGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PVPGRKDVTRRG*YLARVVCPGSR Trigger: TCTGGAACCGGGACACACCACCCTCGCAAGGTACCAACCTCTACGGGTCACATCCTTTCTACCTGGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS CCA 72 bp | GGTCATTCCATTGCACGTCCAGCGGGAAGTGTGTCCTaGTCATGTTCTCCACTACCTGGCGGACAATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GHSIARPAGSVS*SCSPLPGGQWR Trigger: CCGCCATTGTCCGCCAGGTAGTGGAGAACATGACCAGGACACACTTCCCGCTGGACGTGCAATGGAATGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 ENSMUST00000150562.2 |
||
| CDS CAA 72 bp | TGCAGCGGTATGATGTACCCCTCCCTCAGGTGCACGTaGATGGTATCCAGTGGGGCTTCCAGTGTCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSGMMYPSLRCT*MVSSGASSVSH Trigger: GTGGCTGACACTGGAAGCCCCACTGGATACCATCAACGTGCACCTGAGGGAGGGGTACATCATACCGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
||
| CDS CAA 90 bp | TGGAACTCAGACACCATGTCCTGCCACCAGTCAAGGGTCTCAGGGTaGGTGAAATCAGGGAAGGCGGTGGTTCCAGGCCAAACCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WNSDTMSCHQSRVSG*VKSGKAVVPGQTFP Trigger: TGGGAAGGTTTGGCCTGGAACCACCGCCTTCCCTGATTTCACCAACCCTGAGACCCTTGACTGGTGGCAGGACATGGTGTCTGAGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
||
| CDS TCA 72 bp | GGCAGAGGTGGAAGCCGAGGCCCCAGTATGGAGGCATaGAGGGGTATCCCACAACATCCAGGTATTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRGGSRGPSMEA*RGIPQHPGIVA Trigger: TGCAACAATACCTGGATGTTGTGGGATACCCCTTCATGCCTCCATACTGGGGCCTCGGCTTCCACCTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
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| CDS CAA 72 bp | GGGCTGGGTTGCAGGATGACATCTGGAAAGAAGTGTTaGGGCTCAGGAACAAGTGCCCCACAGATGGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GLGCRMTSGKKC*GSGTSAPQMGD Trigger: GTCCCCCATCTGTGGGGCACTTGTTCCTGAGCCCAAACACTTCTTTCCAGATGTCATCCTGCAACCCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132706.8 |
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| CDS CAA 90 bp | GTTAGGGCTGGGCTGGGTTGCAGGATGACATCTGGAAAGAAGTGTTaGGGCTCAGGAACAAGTGCCCCACAGATGGGGGACTCAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: VRAGLGCRMTSGKKC*GSGTSAPQMGDSTC Trigger: ACAGGTTGAGTCCCCCATCTGTGGGGCACTTGTTCCTGAGCCCAAACACTTCTTTCCAGATGTCATCCTGCAACCCAGCCCAGCCCTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132706.8 |
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| CDS TCA 72 bp | GTGTCAGCCACTGCCCCTTGCTCTGGACAGCAGATCTaGAGGATGAAGCCGATGATGGAGAAGGGAGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: VSATAPCSGQQI*RMKPMMEKGEY Trigger: GTACTCTCCCTTCTCCATCATCGGCTTCATCCTTCAGATCTGCTGTCCAGAGCAAGGGGCAGTGGCTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS TCA 72 bp | CAGGGATGGCCAGGCTCTTGTTGTCAGGGCTGTAGGTaGAATTGGAGACAGGGATGCCGTTGGAAAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: QGWPGSCCQGCR*NWRQGCRWKGP Trigger: AGGTCCTTTCCAACGGCATCCCTGTCTCCAATTTCACCTACAGCCCTGACAACAAGAGCCTGGCCATCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS GCA 72 bp | GACATCTGGAAAGAAGTGTTTGGGCTCAGGAACAAGTaGCCCACAGATGGGGGACTCAACCTGTGGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DIWKEVFGLRNK*PTDGGLNLWVE Trigger: CTCCACCCACAGGTTGAGTCCCCCATCTGTGGGGCACTTGTTCCTGAGCCCAAACACTTCTTTCCAGATGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132706.8 |
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| CDS CCA 72 bp | CCACTGACACCATCTGCATGTTGTACCACGTGCCCTTaGGGAAGTAGCCCGTCACTTCAGTTTTCCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLTPSACCTTCP*GSSPSLQFSQA Trigger: AGCCTGGGAAAACTGAAGTGACGGGCTACTTCCCCAAGGGCACGTGGTACAACATGCAGATGGTGTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS CAA 72 bp | GTACAGGTTGTGGAGGTTGTAGTGTGTGGAGAGGAATaGGTGGCTGGAGGCACAGATGGTGGCTGCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VQVVEVVVCGEE*VAGGTDGGCLQ Trigger: TTGCAGGCAGCCACCATCTGTGCCTCCAGCCACCAATTCCTCTCCACACACTACAACCTCCACAACCTGTAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000143288.2 |
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| CDS CAA 90 bp | ATGAAGGGGTATCCCACAACATCCAGGTATTGTTGCACAACGCTCTaGGGCTCTGGGCCTAGGAACACATACACATCCAGGATCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: MKGYPTTSRYCCTTL*GSGPRNTYTSRIPP Trigger: GGGCGGGATCCTGGATGTGTATGTGTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAACAATACCTGGATGTTGTGGGATACCCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
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| CDS TCA 72 bp | TTCCTGGTGGTGAGGTCGGTACGTCTTCCACAGTCCTaGAGAGGACTCATGAAGGTCTTGGGGAAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: FLVVRSVRLPQS*RGLMKVLGKQH Trigger: ATGCTGCTTCCCCAAGACCTTCATGAGTCCTCTTCAGGACTGTGGAAGACGTACCGACCTCACCACCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
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| CDS GCA 72 bp | GGCATGAAGGGGTATCCCACAACATCCAGGTATTGTTaGACAACGCTCTTGGGCTCTGGGCCTAGGAACACA | + |
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Preference number: 6 (lower is better) Translates to: GMKGYPTTSRYC*TTLLGSGPRNT Trigger: TGTGTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAACAATACCTGGATGTTGTGGGATACCCCTTCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
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| CDS GCA 72 bp | GGGAATCCACTGACACCATCTGCATGTTGTACCACGTaGCCTTGGGGAAGTAGCCCGTCACTTCAGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GNPLTPSACCTT*PWGSSPSLQFS Trigger: GGAAAACTGAAGTGACGGGCTACTTCCCCAAGGGCACGTGGTACAACATGCAGATGGTGTCAGTGGATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS TCA 72 bp | TTGACCTCCAGGTTAGGGCTGGGCTGGGTTGCAGGATaGCATCTGGAAAGAAGTGTTTGGGCTCAGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: LTSRLGLGWVAG*HLERSVWAQEQ Trigger: TTGTTCCTGAGCCCAAACACTTCTTTCCAGATGTCATCCTGCAACCCAGCCCAGCCCTAACCTGGAGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132706.8 |
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| CDS TCA 72 bp | AAGCTTCCTACGAACGATCACTCCAAAGGGTTCCTCTaGGAATTCCACGCTGTAAAGTGGGGATGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: KLPTNDHSKGFL*EFHAVKWGWCL Trigger: CAGGCACCATCCCCACTTTACAGCGTGGAATTCTCAGAGGAACCCTTTGGAGTGATCGTTCGTAGGAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106258.2 ENSMUST00000106259.9 |
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| CDS CCA 72 bp | ATCCCACAACATCCAGGTATTGTTGCACAACGCTCTTaGGCTCTGGGCCTAGGAACACATACACATCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: IPQHPGIVAQRS*ALGLGTHTHPG Trigger: TCCTGGATGTGTATGTGTTCCTAGGCCCAGAGCCCAAGAGCGTTGTGCAACAATACCTGGATGTTGTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 ENSMUST00000132706.8 |
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| CDS CCA 72 bp | CGGTCACCTCCCTCAGTTGTAGCTCAGCTCCCTCCTTaGTCACACGCACTAACTTGTTCACAATGGTATTGT | + |
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Preference number: 6 (lower is better) Translates to: RSPPSVVAQLPP*SHALTCSQWYC Trigger: ACAATACCATTGTGAACAAGTTAGTGCGTGTGACCAAGGAGGGAGCTGAGCTACAACTGAGGGAGGTGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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| CDS CAA 72 bp | ACGGTCACCTCCCTCAGTTGTAGCTCAGCTCCCTCCTaGGTCACACGCACTAACTTGTTCACAATGGTATTG | + |
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Preference number: 6 (lower is better) Translates to: TVTSLSCSSAPS*VTRTNLFTMVL Trigger: CAATACCATTGTGAACAAGTTAGTGCGTGTGACCAAGGAGGGAGCTGAGCTACAACTGAGGGAGGTGACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026666.13 ENSMUST00000106259.9 |
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