Pregenerated sensors for FRS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023266Ensembl transcript IDs: ENSMUST00000113296.8, ENSMUST00000156118.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTCCACCATaGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTCCCCAGCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: KGAKCNLENPSQFPP*FPPLRLPLSSPQLG Trigger: CCCAAGCTGGGGAGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| 3UTR GCA 90 bp | GACAGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATaGAACCTTGAGAACCCTTCACAGTTTCCACCATGGTTCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: DSRQTDKRTLGKGAK*NLENPSQFPPWFPP Trigger: AGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGTCCTGGGCTGGTGGGTaGGGTGGAGTCCCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LSSPQLGELDTQWLTSLGSWAGG*GGVPCC Trigger: ACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGA...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGCTGAGAGTCCTGGGCTaGTGGGTGAGGTGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSSPQLGELDTQWLTSLGLRVLG*WVRWSP Trigger: GGGACTCCACCTCACCCACCAGCCCAGGACTCTCAG...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTTGAGAACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCCTCTCCCCAGCTTaGGGAACTGGACACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NLENPSQFPPWFPPLRLPLLSPA*GTGHSV Trigger: CACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAG...GGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| 3UTR-3UTR GCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTCAGGGAAGTGTCTTCTaGAGAGCAGCTGAGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSQGSVF*RAAESP Trigger: AGGACTCTCAGCTGCTCTGCAGAAGACACTTCCCTG...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| 3UTR GCA 72 bp | CAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATaGAACCTTGAGAACCCTTCACAGTTTCCACCATGG | + |
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Preference number: 3 (lower is better) Translates to: QTDKRTLGKGAK*NLENPSQFPPW Trigger: CCATGGTGGAAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGATGCCCTGGCCTGTCTaGCAGCGGCGGCCACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRMPWPV*QRRPLS Trigger: TGAGAGTGGCCGCCGCTGTCAGACAGGCCAGGGCAT...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGGTAGTTGAGCTGCCTTaGGGGCTCAGGGCCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRVVELP*GLRALP Trigger: CGGCAGGGCCCTGAGCCCCCAAGGCAGCTCAACTAC...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGGGAACCCTGTGTCTGTaGTGGGAGGGGTACCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRGTLCL*WEGYPA Trigger: GGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCC...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGGGGGGCTCAGGGCCCTaGCGGCGGAAATCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRGGSGP*RRKSKL Trigger: CAACTTTGATTTCCGCCGGCAGGGCCCTGAGCCCCC...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCTTGAGAACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCAGGGCCGCCCGACGGTaGGCCAGGCCACTCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: NLENPSQFPPWFPPLRLPRAARR*ARPLHP Trigger: AGGGTGGAGTGGCCTGGCCCACCGTCGGGCGGCCCT...GGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGCTGTACCCCAGCCCTTaGGCTCCACCTGGATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRLYPSP*APPGCS Trigger: ACTACATCCAGGTGGAGCTCAAGGGCTGGGGTACAG...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGAGCACGAACTTGACCTaGCCTGGCTGGAGCAACACC | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRSTNLT*PGWSNT Trigger: GGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGTGCT...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGTGCGGAGGAGAACCGTaGGCCCTCTCCAGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGCGGEP*ALSRAA Trigger: GGCTGCCCTGGAGAGGGCCCACGGTTCTCCTCCGCA...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGTTGACCTGCCCTGGCTaGAGCAACACCTGTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRLTCPG*SNTCGS Trigger: AGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAA...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGCTGCCCTCGAACACTTaGATGCAAAGATGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRLPSNT*MQRCPG Trigger: GCCAGGGCATCTTTGCATTCAAGTGTTCGAGGGCAG...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTGGCCCAGCACGAACTTaGCCTGCCCTGGCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSGPART*PALAGA Trigger: TGCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCC...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGTGGCACTTCATCACCTaGCGCCGAGCAGGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGWHFIT*RRAGVG Trigger: CCCCACCCCTGCTCGGCGGCAGGTGATGAAGTGCCA...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGCCCGGGCAGAGGCTCTaGCACTTCATCACCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGPGQRL*HFITCR Trigger: GCGGCAGGTGATGAAGTGCCAGAGCCTCTGCCCGGG...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGTCGTCGGCGGGTCAGTaGGACAGGGAAGCCGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGSSAGQ*DREAAV Trigger: CACAGCGGCTTCCCTGTCCCACTGACCCGCCGACGA...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGGACACTGAGGGGTTCTaGGGCCCCTTGGGACGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGDTEGF*GPLGRA Trigger: AGCCCGTCCCAAGGGGCCCCAGAACCCCTCAGTGTC...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTTCCCCTCCCGGCTGTTaGCCTTGGCTCTCCCACACT | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSSPPGC*PWLSHT Trigger: AGTGTGGGAGAGCCAAGGTCAACAGCCGGGAGGGGA...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTAGGGGTGTCGCAGACTaGTTGTGGAGGGTCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSRGVAD*LWRVGE Trigger: CTCGCCGACCCTCCACAAGCAGTCTGCGACACCCCT...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AACCTTGAGAACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTGGGAGGGGTACCCTaGCCTCAGGCAGTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: NLENPSQFPPWFPPLRLPLGGVP*PQAVAA Trigger: TGCAGCCACTGCCTGAGGGCAGGGTACCCCTCCCAG...GGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTGCATTTGGGCTGGGCTaGGCACTCAGAAGGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSAFGLG*ALRRAL Trigger: GAGGGCCCTTCTGAGTGCCCAGCCCAGCCCAAATGC...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTGAACAGGGTGTGGGGTaGGCCCAGGAGCTCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSEQGVG*AQELQT Trigger: TGTCTGGAGCTCCTGGGCCCACCCCACACCCTGTTC...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGGGTCCTGCAGCAGGTTaGAGATGTCCTCTGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGGPAAG*RCPLPS Trigger: CGAGGGCAGAGGACATCTTCAACCTGCTGCAGGACC...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTGGCGGAAATCAAAGTTaGAGACCCGCGGGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSGGNQS*RPAGSL Trigger: GAGGCTCCCCGCGGGTCTTCAACTTTGATTTCCGCC...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTCCACCTGGATGTAGTTaGGCTGCCTTGGGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSPPGCS*AALGAQ Trigger: CTGAGCCCCCAAGGCAGCTCAACTACATCCAGGTGG...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGCCTCGAACACTTGAATaGAAAGATGCCCTGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRPRTLE*KDALAC Trigger: ACAGGCCAGGGCATCTTTGCATTCAAGTGTTCGAGG...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTAGCACCAGCTCACTCTaGGTCAGCTCCATCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSSTSSL*VSSITP Trigger: GGGGGTGATGGAGCTGACCCAGAGTGAGCTGGTGCT...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCTTGAGAACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCAGGTCCAGCTCTGGTaGGTGGCTGCTCCGCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: NLENPSQFPPWFPPLRLPQVQLW*VAAPRD Trigger: ATCACGCGGAGCAGCCACCCACCAGAGCTGGACCTG...GGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGGGGGAGGGTCCTGCATaGCCGGGCAGAGGCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRQTDKRTLGKGAKCNLEGEGPA*PGRGSG Trigger: GCCAGAGCCTCTGCCCGGGCATGCAGGACCCTCCCC...CTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTCATACGAGTCTGAGCTaGGAACAGGGTGTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSHTSLS*EQGVGW Trigger: CCACCCCACACCCTGTTCGCAGCTCAGACTCGTATG...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGCGGGGCAGAGCCCTCTaGAGGTCGGACATGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SRQTDKRTLGKGAKCNLERGRAL*RSDMAA Trigger: GGCGGCCATGTCCGACCTGCAGAGGGCTCTGCCCCG...CTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGATCCTCATCCCCAGTTaGTGTGTTGACATAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ESPGLVGEVESPAVGRGRILIPS*CVDIGV Trigger: CACACCTATGTCAACACACCAACTGGGGATGAGGAT...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTTCTCGTAGGTGCATTTaGGCTGGGCTGGGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSSRRCI*AGLGTQ Trigger: CTGAGTGCCCAGCCCAGCCCAAATGCACCTACGAGA...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGCCACACTGGGGGAAGTaGGGGCAGGTTCTCATAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGPHWGK*GQVLIV Trigger: CACTATGAGAACCTGCCCCCACTTCCCCCAGTGTGG...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGCACTGCATGAGGTCCTaGAGCAGGTTGAAGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSPQLGELDTQWLTSLGHCMRS*SRLKMS Trigger: GGACATCTTCAACCTGCTGCAGGACCTCATGCAGTG...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTTTGAACTTGGTAGGGTaGTTGTGCGGCACGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSLNLVG*LCGTLS Trigger: AGACAGCGTGCCGCACAACCACCCTACCAAGTTCAA...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CATGGACAGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAAGTCGCAGACTGCTTGTaGAGGGTCGGCGAGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: HGQQTDRQTDIREGCEMQVADCL*RVGEVR Trigger: CCGCACCTCGCCGACCCTCCACAAGCAGTCTGCGAC...TTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCTGTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGACCCTGTGTCTGTGCTaGGAGGGGTACCCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRQTDKRTLGKGAKCNLETLCLC*EGYPAL Trigger: GAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGT...CTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTGCTGCGAACAGGGTGTaGGGTGGGCCCAGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KRTLGKGAKCNLENPSQFAANRV*GGPRSS Trigger: GGAGCTCCTGGGCCCACCCCACACCCTGTTCGCAGC...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTCCTGCCCTCAGGCAGTaGCTGCAGGCAGTGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: KRTLGKGAKCNLENPSQFPALRQ*LQAVAT Trigger: AGTCGCCACTGCCTGCAGCCACTGCCTGAGGGCAGG...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTGCTGCAGGCCCCCGCTaGCGTTCTCGTAGGTGCATT | + |
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Preference number: 4 (lower is better) Translates to: KRTLGKGAKCNLENPSQFAAGPR*RSRRCI Trigger: AATGCACCTACGAGAACGTCAGCGGGGGCCTGCAGC...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | CATGGACAGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAAACAGCTTCCCGCTGGTaGAGGTGTAGCACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGQQTDRQTDIREGCEMQTASRW*RCSTSS Trigger: TGAGCTGGTGCTACACCTGCACCAGCGGGAAGCTGT...TTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCTGTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGACAGAGGCAGGTCGGTaGTGTTGTGCCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRQTDKRTLGKGAKCNLETEAGR*CCAESS Trigger: GGAAGACTCGGCACAACAGCACCGACCTGCCTCTGT...CTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | AGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGGAGGCAATGAGGGTGTaGGTAGACTCTTCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRQTDKRTLGKGAKCNLEEAMRV*VDSSPG Trigger: GCCTGGGGAAGAGTCTACCCACACCCTCATTGCCTC...CTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CCA 90 bp | CATGGACAGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAAGAACTTGACCTGCCCTaGCTGGAGCAACACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HGQQTDRQTDIREGCEMQELDLP*LEQHLW Trigger: CCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTC...TTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCTGTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTAGGTCGGTGCTGTTGTaGCGAGTCTTCCTGACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRTLGKGAKCNLENPSQFRSVLL*RVFLTA Trigger: CGCGGTCAGGAAGACTCGGCACAACAGCACCGACCT...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR TCA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTCCCTCGTTGTTGTTGTaGTGGGGAGGGTCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KRTLGKGAKCNLENPSQFPSLLL*WGGSCM Trigger: CATGCAGGACCCTCCCCATCACAACAACAACGAGGG...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR GCA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTTTGGTAGGGTGGTTGTaGGGCACGCTGTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTLGKGAKCNLENPSQFLVGWL*GTLSLS Trigger: GGACAGAGACAGCGTGCCGCACAACCACCCTACCAA...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CGCGGGGAGCCTCGTCGGCGGGTCAGTGGGACAGGGAAGCCGCTGTaGCTACGGGCGGAGGCCCGCGTGCTGGTGGGTTTCTGTAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGEPRRRVSGTGKPL*LRAEARVLVGFCSG Trigger: CCCGCTACAGAAACCCACCAGCACGCGGGCCTCCGCCCGTAGCCACAGCGGCTTCCCTGTCCCACTGACCCGCCGACGAGGCTCCCCGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CGTGTAGCCAGCGGGCTGTGGGGGCCCTCGAGGCAGGTCCAGCTCTaGTGGGTGGCTGCTCCGCGTGATGATGACCGGCTCCTCCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVASGLWGPSRQVQL*WVAAPRDDDRLLRH Trigger: GTGACGGAGGAGCCGGTCATCATCACGCGGAGCAGCCACCCACCAGAGCTGGACCTGCCTCGAGGGCCCCCACAGCCCGCTGGCTACACG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 90 bp | GGAGGGTCCTGCATGCCCGGGCAGAGGCTCTGGCACTTCATCACCTaGCGCCGAGCAGGGGTGGGGCCCAGCACGAACTTGACCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSCMPGQRLWHFIT*RRAGVGPSTNLTCP Trigger: AGGGCAGGTCAAGTTCGTGCTGGGCCCCACCCCTGCTCGGCGGCAGGTGATGAAGTGCCAGAGCCTCTGCCCGGGCATGCAGGACCCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CCAGCGGGCTGTGGGGGCCCTCGAGGCAGGTCCAGCTCTGGTGGGTaGCTGCTCCGCGTGATGATGACCGGCTCCTCCGTCACGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAGCGGPRGRSSSGG*LLRVMMTGSSVTLM Trigger: CATCAACGTGACGGAGGAGCCGGTCATCATCACGCGGAGCAGCCACCCACCAGAGCTGGACCTGCCTCGAGGGCCCCCACAGCCCGCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | AGGGAAGCCATTGGAGAAGCCAGAGACCGTGTAGCCAGCGGGCTGTaGGGGCCCTCGAGGCAGGTCCAGCTCTGGTGGGTGGCTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: REAIGEARDRVASGL*GPSRQVQLWWVAAP Trigger: CGGAGCAGCCACCCACCAGAGCTGGACCTGCCTCGAGGGCCCCCACAGCCCGCTGGCTACACGGTCTCTGGCTTCTCCAATGGCTTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | GAAATCAAAGTTGAAGACCCGCGGGGAGCCTCGTCGGCGGGTCAGTaGGACAGGGAAGCCGCTGTGGCTACGGGCGGAGGCCCGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EIKVEDPRGASSAGQ*DREAAVATGGGPRA Trigger: AGCACGCGGGCCTCCGCCCGTAGCCACAGCGGCTTCCCTGTCCCACTGACCCGCCGACGAGGCTCCCCGCGGGTCTTCAACTTTGATTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS TCA 90 bp | ACTTCATCACCTGCCGCCGAGCAGGGGTGGGGCCCAGCACGAACTTaGCCTGCCCTGGCTGGAGCAACACCTGTGGGTCTCGCTGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSSPAAEQGWGPART*PALAGATPVGLAGR Trigger: CCGACCAGCGAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCCCCACCCCTGCTCGGCGGCAGGTGATGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | GAGCAACACCTGTGGGTCTCGCTGGTCGGAACCCTGTGTCTGTGCTaGGAGGGGTACCCTGCCCTCAGGCAGTGGCTGCAGGCAGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EQHLWVSLVGTLCLC*EGYPALRQWLQAVA Trigger: CGCCACTGCCTGCAGCCACTGCCTGAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACCCACAGGTGTTGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CGCCGAGCAGGGGTGGGGCCCAGCACGAACTTGACCTGCCCTGGCTaGAGCAACACCTGTGGGTCTCGCTGGTCGGAACCCTGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRAGVGPSTNLTCPG*SNTCGSRWSEPCVC Trigger: ACAGACACAGGGTTCCGACCAGCGAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCCCCACCCCTGCTCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | GGACAGGGAAGCCGCTGTGGCTACGGGCGGAGGCCCGCGTGCTGGTaGGTTTCTGTAGCGGGGTTTCATCCTCCTCGCCATCAGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQGSRCGYGRRPACW*VSVAGFHPPRHQGS Trigger: GCTTCCCTGATGGCGAGGAGGATGAAACCCCGCTACAGAAACCCACCAGCACGCGGGCCTCCGCCCGTAGCCACAGCGGCTTCCCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 90 bp | GGTCTCGCTGGTCGGAACCCTGTGTCTGTGCTGGGAGGGGTACCCTaGCCTCAGGCAGTGGCTGCAGGCAGTGGCGACTTCTGCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLAGRNPVSVLGGVP*PQAVAAGSGDFCHP Trigger: AGGATGGCAGAAGTCGCCACTGCCTGCAGCCACTGCCTGAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 90 bp | CTGGAGCAACACCTGTGGGTCTCGCTGGTCGGAACCCTGTGTCTGTaGTGGGAGGGGTACCCTGCCCTCAGGCAGTGGCTGCAGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LEQHLWVSLVGTLCL*WEGYPALRQWLQAV Trigger: CACTGCCTGCAGCCACTGCCTGAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACCCACAGGTGTTGCTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | GGGGCCCAGCACGAACTTGACCTGCCCTGGCTGGAGCAACACCTGTaGGTCTCGCTGGTCGGAACCCTGTGTCTGTGCTGGGAGGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GAQHELDLPWLEQHL*VSLVGTLCLCWEGY Trigger: GTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | GGAACCCTGTGTCTGTGCTGGGAGGGGTACCCTGCCCTCAGGCAGTaGCTGCAGGCAGTGGCGACTTCTGCCATCCTCATCCCCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTLCLCWEGYPALRQ*LQAVATSAILIPSW Trigger: CCAACTGGGGATGAGGATGGCAGAAGTCGCCACTGCCTGCAGCCACTGCCTGAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS TCA 90 bp | CATTTGGGCTGGGCTGGGCACTCAGAAGGGCCCTCGTTGTTGTTGTaGTGGGGAGGGTCCTGCATGCCCGGGCAGAGGCTCTGGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLGWAGHSEGPSLLL*WGGSCMPGQRLWHF Trigger: GAAGTGCCAGAGCCTCTGCCCGGGCATGCAGGACCCTCCCCATCACAACAACAACGAGGGCCCTTCTGAGTGCCCAGCCCAGCCCAAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 90 bp | ACTCAGAAGGGCCCTCGTTGTTGTTGTGATGGGGAGGGTCCTGCATaGCCGGGCAGAGGCTCTGGCACTTCATCACCTGCCGCCGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQKGPRCCCDGEGPA*PGRGSGTSSPAAEQ Trigger: CTGCTCGGCGGCAGGTGATGAAGTGCCAGAGCCTCTGCCCGGGCATGCAGGACCCTCCCCATCACAACAACAACGAGGGCCCTTCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CAGCGGACAGCTTCCCGCTGGTGCAGGTGTAGCACCAGCTCACTCTaGGTCAGCTCCATCACCCCCGAGCCCAACTCCACCCCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QRTASRWCRCSTSSL*VSSITPEPNSTPSS Trigger: TGATGAAGGGGTGGAGTTGGGCTCGGGGGTGATGGAGCTGACCCAGAGTGAGCTGGTGCTACACCTGCACCAGCGGGAAGCTGTCCGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | ACGAACTTGACCTGCCCTGGCTGGAGCAACACCTGTGGGTCTCGCTaGTCGGAACCCTGTGTCTGTGCTGGGAGGGGTACCCTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TNLTCPGWSNTCGSR*SEPCVCAGRGTLPS Trigger: TGAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CTGCAGGCCCCCGCTGACGTTCTCGTAGGTGCATTTGGGCTGGGCTaGGCACTCAGAAGGGCCCTCGTTGTTGTTGTGATGGGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQAPADVLVGAFGLG*ALRRALVVVVMGRV Trigger: GACCCTCCCCATCACAACAACAACGAGGGCCCTTCTGAGTGCCCAGCCCAGCCCAAATGCACCTACGAGAACGTCAGCGGGGGCCTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | TGTACCCCAGCCCTTGAGCTCCACCTGGATGTAGTTGAGCTGCCTTaGGGGCTCAGGGCCCTGCCGGCGGAAATCAAAGTTGAAGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: CTPALELHLDVVELP*GLRALPAEIKVEDP Trigger: CGGGTCTTCAACTTTGATTTCCGCCGGCAGGGCCCTGAGCCCCCAAGGCAGCTCAACTACATCCAGGTGGAGCTCAAGGGCTGGGGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | GAGAGTCCTGGGCTGGTGGGTGAGGTGGAGTCCCCTGCTGTAGGCAGAGGCAGGTCTGCCCTCGAACACTaGAATGCAAAGATGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESPGLVGEVESPAVGRGRSALEH*NAKMPW Trigger: CCAGGGCATCTTTGCATTCAAGTGTTCGAGGGCAGA...CCTGCCTCTGCCTACAGCAGGGGACTCCACCTCACCCACCAGCCCAGGACTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | AACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCCTCTCCTCTCAGCCAGGGAAGCCATaGGAGAAGCCAGAGACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: NPSQFPPWFPPLRLPLSSQPGKP*EKPETV Trigger: CACGGTCTCTGGCTTCTCCAATGGCTTCCCTGGCTG...AGAGGAGAGGGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | AACCTTGAGAACCCTTCACAGTTTCCACCATGGTTCCCTCCTCTCCGGCTCCCCGGCAGGTCGGTGCTGTaGTGCCGAGTCTTCCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: NLENPSQFPPWFPPLRLPGRSVL*CRVFLT Trigger: GGTCAGGAAGACTCGGCACAACAGCACCGACCTGCC...GGGGAGCCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 90 bp | CAGTGGCTGCAGGCAGTGGCGACTTCTGCCATCCTCATCCCCAGTTaGTGTGTTGACATAGGTGTGAGACTGCTCCTCGGAGGCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QWLQAVATSAILIPS*CVDIGVRLLLGGNE Trigger: CTCATTGCCTCCGAGGAGCAGTCTCACACCTATGTCAACACACCAACTGGGGATGAGGATGGCAGAAGTCGCCACTGCCTGCAGCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCTCTCCCCAGCTTGGGGAACTGGACACTCAGTGGCTGACATCTTTGGGGTCCACATTGGTCACCTaGAACTTGGTAGGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSPQLGELDTQWLTSLGSTLVT*NLVGWL Trigger: CAACCACCCTACCAAGTTCAAGGTGACCAATGTGGA...CCCCAAAGATGTCAGCCACTGAGTGTCCAGTTCCCCAAGCTGGGGAGAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTGGGCCCAGCACGAACTaGACCTGCCCTGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRTLGKGAKCNLENPSQFGPSTN*TCPGWS Trigger: GCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCCC...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 90 bp | ACCGGCTCCTCCGTCACGTTGATGCTGTTACACTGCATGAGGTCCTaGAGCAGGTTGAAGATGTCCTCTGCCCTCGAACACTTGAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSSVTLMLLHCMRS*SRLKMSSALEHLNA Trigger: TGCATTCAAGTGTTCGAGGGCAGAGGACATCTTCAACCTGCTGCAGGACCTCATGCAGTGTAACAGCATCAACGTGACGGAGGAGCCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | CATGGACAGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACGGCGGAAATCAAAGTaGAAGACCCGCGGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HGQQTDRQTDIREGCEMQRRKSK*KTRGEP Trigger: AGGCTCCCCGCGGGTCTTCAACTTTGATTTCCGCCG...TTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCTGTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 90 bp | GCTGTTACACTGCATGAGGTCCTGCAGCAGGTTGAAGATGTCCTCTaGCCTCGAACACTTGAATGCAAAGATGCCCTGGCCTGTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: AVTLHEVLQQVEDVL*PRTLECKDALACLT Trigger: TGTCAGACAGGCCAGGGCATCTTTGCATTCAAGTGTTCGAGGGCAGAGGACATCTTCAACCTGCTGCAGGACCTCATGCAGTGTAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTAACTTGGTAGGGTGGTaGTGCGGCACGCTGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRTLGKGAKCNLENPSQFNLVGW*CGTLSL Trigger: CAGAGACAGCGTGCCGCACAACCACCCTACCAAGTT...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | AAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGAACCCTTCACAGTTTAGGTCCTGCAGCAGGTaGAAGATGTCCTCTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRTLGKGAKCNLENPSQFRSCSR*KMSSAL Trigger: GAGGGCAGAGGACATCTTCAACCTGCTGCAGGACCT...AAACTGTGAAGGGTTCTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS-3UTR CAA 90 bp | AGCAGACAGACAGACAAACGGACATTAGGGAAGGGTGCGAAATGCAACCTTGAGATGGCCGCCGTTTTCTaGAGGTCAATCACGGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SRQTDKRTLGKGAKCNLEMAAVF*RSITAY Trigger: GTATGCCGTGATTGACCTCAAGAAAACGGCGGCCAT...CTCAAGGTTGCATTTCGCACCCTTCCCTAATGTCCGTTTGTCTGTCTGTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | CCTCGTCGGCGGGTCAGTGGGACAGGGAAGCCGCTGTaGCTACGGGCGGAGGCCCGCGTGCTGGTGGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRRRVSGTGKPL*LRAEARVLVGF Trigger: GAAACCCACCAGCACGCGGGCCTCCGCCCGTAGCCACAGCGGCTTCCCTGTCCCACTGACCCGCCGACGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | GTTGAAGACCCGCGGGGAGCCTCGTCGGCGGGTCAGTaGGACAGGGAAGCCGCTGTGGCTACGGGCGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VEDPRGASSAGQ*DREAAVATGGG Trigger: GCCTCCGCCCGTAGCCACAGCGGCTTCCCTGTCCCACTGACCCGCCGACGAGGCTCCCCGCGGGTCTTCAAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | AGCGGGCTGTGGGGGCCCTCGAGGCAGGTCCAGCTCTaGTGGGTGGCTGCTCCGCGTGATGATGACCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGLWGPSRQVQL*WVAAPRDDDRL Trigger: GAGCCGGTCATCATCACGCGGAGCAGCCACCCACCAGAGCTGGACCTGCCTCGAGGGCCCCCACAGCCCGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS TCA 72 bp | CCTGCCGCCGAGCAGGGGTGGGGCCCAGCACGAACTTaGCCTGCCCTGGCTGGAGCAACACCTGTGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAAEQGWGPART*PALAGATPVGL Trigger: GAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCCCCACCCCTGCTCGGCGGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CAA 90 bp | TTGAGCTGCCTTGGGGGCTCAGGGCCCTGCCGGCGGAAATCAAAGTaGAAGACCCGCGGGGAGCCTCGTCGGCGGGTCAGTGGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSCLGGSGPCRRKSK*KTRGEPRRRVSGTG Trigger: CCCTGTCCCACTGACCCGCCGACGAGGCTCCCCGCGGGTCTTCAACTTTGATTTCCGCCGGCAGGGCCCTGAGCCCCCAAGGCAGCTCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
||
| CDS TCA 72 bp | TTGGGGGCTCAGGGCCCTGCCGGCGGAAATCAAAGTTaGAGACCCGCGGGGAGCCTCGTCGGCGGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGAQGPAGGNQS*RPAGSLVGGSV Trigger: CACTGACCCGCCGACGAGGCTCCCCGCGGGTCTTCAACTTTGATTTCCGCCGGCAGGGCCCTGAGCCCCCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 72 bp | TGCATGCCCGGGCAGAGGCTCTGGCACTTCATCACCTaGCGCCGAGCAGGGGTGGGGCCCAGCACGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: CMPGQRLWHFIT*RRAGVGPSTNL Trigger: CAAGTTCGTGCTGGGCCCCACCCCTGCTCGGCGGCAGGTGATGAAGTGCCAGAGCCTCTGCCCGGGCATGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | GCTTGTGGAGGGTCGGCGAGGTGCGGAGGAGAACCGTaGGCCCTCTCCAGGGCAGCCAGGGAAGCCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: ACGGSARCGGEP*ALSRAAREAIG Trigger: TCCAATGGCTTCCCTGGCTGCCCTGGAGAGGGCCCACGGTTCTCCTCCGCACCTCGCCGACCCTCCACAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | ACTCTTCCCCAGGCGAGGGGTGTCGCAGACTGCTTGTaGAGGGTCGGCGAGGTGCGGAGGAGAACCGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TLPQARGVADCL*RVGEVRRRTVG Trigger: GCCCACGGTTCTCCTCCGCACCTCGCCGACCCTCCACAAGCAGTCTGCGACACCCCTCGCCTGGGGAAGAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | GGGGTGGGGCCCAGCACGAACTTGACCTGCCCTGGCTaGAGCAACACCTGTGGGTCTCGCTGGTCGGAACCC | + |
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Preference number: 6 (lower is better) Translates to: GVGPSTNLTCPG*SNTCGSRWSEP Trigger: GGGTTCCGACCAGCGAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGTCAAGTTCGTGCTGGGCCCCACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CAA 72 bp | CTTGGGGGCTCAGGGCCCTGCCGGCGGAAATCAAAGTaGAAGACCCGCGGGGAGCCTCGTCGGCGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LGGSGPCRRKSK*KTRGEPRRRVS Trigger: ACTGACCCGCCGACGAGGCTCCCCGCGGGTCTTCAACTTTGATTTCCGCCGGCAGGGCCCTGAGCCCCCAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CAA 90 bp | GCCACTCCACCCTCGCTCCTCAGGGCTCAGTCTCCAGCCAGCCCCTaGCTGCAGGCCCCCGCTGACGTTCTCGTAGGTGCATTTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATPPSLLRAQSPASP*LQAPADVLVGAFGL Trigger: CAGCCCAAATGCACCTACGAGAACGTCAGCGGGGGCCTGCAGCAAGGGGCTGGCTGGAGACTGAGCCCTGAGGAGCGAGGGTGGAGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | ATTGGAGAAGCCAGAGACCGTGTAGCCAGCGGGCTGTaGGGGCCCTCGAGGCAGGTCCAGCTCTGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: IGEARDRVASGL*GPSRQVQLWWV Trigger: CACCCACCAGAGCTGGACCTGCCTCGAGGGCCCCCACAGCCCGCTGGCTACACGGTCTCTGGCTTCTCCAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | CTGTGGGTCTCGCTGGTCGGAACCCTGTGTCTGTGCTaGGAGGGGTACCCTGCCCTCAGGCAGTGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWVSLVGTLCLC*EGYPALRQWLQ Trigger: CTGCAGCCACTGCCTGAGGGCAGGGTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACCCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | CGGCTGTTGACCTTGGCTCTCCCACACTGGGGGAAGTaGGGGCAGGTTCTCATAGTGCAGCAGGGCCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RLLTLALPHWGK*GQVLIVQQGRP Trigger: CGGGCGGCCCTGCTGCACTATGAGAACCTGCCCCCACTTCCCCCAGTGTGGGAGAGCCAAGGTCAACAGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | ACCTGCCCTGGCTGGAGCAACACCTGTGGGTCTCGCTaGTCGGAACCCTGTGTCTGTGCTGGGAGGGGTACC | + |
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Preference number: 6 (lower is better) Translates to: TCPGWSNTCGSR*SEPCVCAGRGT Trigger: GGTACCCCTCCCAGCACAGACACAGGGTTCCGACCAGCGAGACCCACAGGTGTTGCTCCAGCCAGGGCAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | CGGCATACGAGTCTGAGCTGCGAACAGGGTGTGGGGTaGGCCCAGGAGCTCCAGACACTGAGGGGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RHTSLSCEQGVG*AQELQTLRGSG Trigger: CCCAGAACCCCTCAGTGTCTGGAGCTCCTGGGCCCACCCCACACCCTGTTCGCAGCTCAGACTCGTATGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS GCA 72 bp | GGCCCTCGTTGTTGTTGTGATGGGGAGGGTCCTGCATaGCCGGGCAGAGGCTCTGGCACTTCATCACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GPRCCCDGEGPA*PGRGSGTSSPA Trigger: GGCAGGTGATGAAGTGCCAGAGCCTCTGCCCGGGCATGCAGGACCCTCCCCATCACAACAACAACGAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | AGGGGTACCCTGCCCTCAGGCAGTGGCTGCAGGCAGTaGCGACTTCTGCCATCCTCATCCCCAGTTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RGTLPSGSGCRQ*RLLPSSSPVGV Trigger: CACACCAACTGGGGATGAGGATGGCAGAAGTCGCCACTGCCTGCAGCCACTGCCTGAGGGCAGGGTACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | GCCCTTGAGCTCCACCTGGATGTAGTTGAGCTGCCTTaGGGGCTCAGGGCCCTGCCGGCGGAAATCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: ALELHLDVVELP*GLRALPAEIKV Trigger: AACTTTGATTTCCGCCGGCAGGGCCCTGAGCCCCCAAGGCAGCTCAACTACATCCAGGTGGAGCTCAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | CCCGCTGACGTTCTCGTAGGTGCATTTGGGCTGGGCTaGGCACTCAGAAGGGCCCTCGTTGTTGTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: PADVLVGAFGLG*ALRRALVVVVM Trigger: CATCACAACAACAACGAGGGCCCTTCTGAGTGCCCAGCCCAGCCCAAATGCACCTACGAGAACGTCAGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CAA 72 bp | CTGCTCCGCGTGATGATGACCGGCTCCTCCGTCACGTaGATGCTGTTACACTGCATGAGGTCCTGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLRVMMTGSSVT*MLLHCMRSCSR Trigger: CCTGCTGCAGGACCTCATGCAGTGTAACAGCATCAACGTGACGGAGGAGCCGGTCATCATCACGCGGAGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CAA 90 bp | GGTGGGTGGCTGCTCCGCGTGATGATGACCGGCTCCTCCGTCACGTaGATGCTGTTACACTGCATGAGGTCCTGCAGCAGGTTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: GGWLLRVMMTGSSVT*MLLHCMRSCSRLKM Trigger: CATCTTCAACCTGCTGCAGGACCTCATGCAGTGTAACAGCATCAACGTGACGGAGGAGCCGGTCATCATCACGCGGAGCAGCCACCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS TCA 72 bp | GAGCCCTCTGCAGGTCGGACATGGCCGCCGTTTTCTTaGGGTCAATCACGGCATACGAGTCTGAGCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: EPSAGRTWPPFS*GQSRHTSLSCE Trigger: TTCGCAGCTCAGACTCGTATGCCGTGATTGACCTCAAGAAAACGGCGGCCATGTCCGACCTGCAGAGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | CAGGCAGTGGCGACTTCTGCCATCCTCATCCCCAGTTaGTGTGTTGACATAGGTGTGAGACTGCTCCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: QAVATSAILIPS*CVDIGVRLLLG Trigger: TCCGAGGAGCAGTCTCACACCTATGTCAACACACCAACTGGGGATGAGGATGGCAGAAGTCGCCACTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CAA 72 bp | TCATCCACATTGGTCACCTTGAACTTGGTAGGGTGGTaGTGCGGCACGCTGTCTCTGTCCAGGCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSTLVTLNLVGW*CGTLSLSRQLQ Trigger: CTGGAGCTGCCTGGACAGAGACAGCGTGCCGCACAACCACCCTACCAAGTTCAAGGTGACCAATGTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113296.8 ENSMUST00000156118.8 |
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| CDS GCA 72 bp | CTGCATGAGGTCCTGCAGCAGGTTGAAGATGTCCTCTaGCCTCGAACACTTGAATGCAAAGATGCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LHEVLQQVEDVL*PRTLECKDALA Trigger: GGCCAGGGCATCTTTGCATTCAAGTGTTCGAGGGCAGAGGACATCTTCAACCTGCTGCAGGACCTCATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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| CDS CCA 72 bp | TCATCATCCACATTGGTCACCTTGAACTTGGTAGGGTaGTTGTGCGGCACGCTGTCTCTGTCCAGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSSTLVTLNLVG*LCGTLSLSRQL Trigger: GAGCTGCCTGGACAGAGACAGCGTGCCGCACAACCACCCTACCAAGTTCAAGGTGACCAATGTGGATGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113296.8 ENSMUST00000156118.8 |
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| CDS GCA 72 bp | TCCGTCACGTTGATGCTGTTACACTGCATGAGGTCCTaGAGCAGGTTGAAGATGTCCTCTGCCCTCGAACAC | + |
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Preference number: 6 (lower is better) Translates to: SVTLMLLHCMRS*SRLKMSSALEH Trigger: GTGTTCGAGGGCAGAGGACATCTTCAACCTGCTGCAGGACCTCATGCAGTGTAACAGCATCAACGTGACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113296.8 |
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