RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FREM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037016

Ensembl transcript IDs: ENSMUST00000091137.6

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACACAGATAAGGTCCCAGAGGGCAACCTCATAGCACCGGCTCGCTaGACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACT +
Preference number: 1 (lower is better)
Translates to: NTDKVPEGNLIAPAR*TGGGQTEMFSSWIT
Trigger: AGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTCAGCGAGCCGGTGCTATGAGGTTGCCCTCTGGGACCTTATCTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 90 bp GCACGTCTACAACTCTCTTGCTTCACACCAAGGCTGGGTTATCAGTaGGGCCGATTAACGAGAGCCTGGCTGCAAATATATCCCGAAGAC +
Preference number: 1 (lower is better)
Translates to: ARLQLSCFTPRLGYQ*GRLTRAWLQIYPED
Trigger: GTCTTCGGGATATATTTGCAGCCAGGCTCTCGTTAATCGGCCTCACTGATAACCCAGCCTTGGTGTGAAGCAAGAGAGTTGTAGACGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 90 bp ACAGAAGGGTGCTACAGTGTGTCTCATCTCTTGAAAGACACTGGATaGAGAGGGAAGCAGGCAACAGGCATTTCTCCTTCAGGACCAGTG +
Preference number: 1 (lower is better)
Translates to: TEGCYSVSHLLKDTG*RGKQATGISPSGPV
Trigger: CACTGGTCCTGAAGGAGAAATGCCTGTTGCCTGCTTCCCTCTCCATCCAGTGTCTTTCAAGAGATGAGACACACTGTAGCACCCTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR GCA 90 bp TTGAGAACCTTGTCGTGTGGCGAATCTAACTCTATGGTGTCTCTTTaGCGGCACGTCTACAACTCTCTTGCTTCACACCAAGGCTGGGTT +
Preference number: 1 (lower is better)
Translates to: LRTLSCGESNSMVSL*RHVYNSLASHQGWV
Trigger: AACCCAGCCTTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTTAGATTCGCCACACGACAAGGTTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 90 bp AGACAGGCTGGCACTCACAGGTTGATACCCACTGACATACAGGAATaGCCTGAGATGAAGTTTGCTTCCGAGTATCTCCATTCTACCAGG +
Preference number: 1 (lower is better)
Translates to: RQAGTHRLIPTDIQE*PEMKFASEYLHSTR
Trigger: CCTGGTAGAATGGAGATACTCGGAAGCAAACTTCATCTCAGGTCATTCCTGTATGTCAGTGGGTATCAACCTGTGAGTGCCAGCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 90 bp TCTAAGCATCCTGGATGCCTTCTGGGCAGCAGGAAAGATGTGGCCTaGATTTGTCCTTTGATGCATGCATGGCGCAATAGAGTTCAAATC +
Preference number: 1 (lower is better)
Translates to: SKHPGCLLGSRKDVA*ICPLMHAWRNRVQI
Trigger: GATTTGAACTCTATTGCGCCATGCATGCATCAAAGGACAAATTCAGGCCACATCTTTCCTGCTGCCCAGAAGGCATCCAGGATGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 90 bp GTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTaGGCTGAAGGCCACAGGGCAGTCAGGCTTGGAAGTGCTCAACCA +
Preference number: 1 (lower is better)
Translates to: VTIYDNVPFVAIFTS*AEGHRAVRLGSAQP
Trigger: TGGTTGAGCACTTCCAAGCCTGACTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR GCA 90 bp GTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTaGCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGG +
Preference number: 1 (lower is better)
Translates to: VRFGIDASWSQYMIM*HSLLYSLPELKATG
Trigger: CCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 90 bp GATTTTAGCCTAATACAATTTCCTGTGGCTGATATAAGCTCCGGATaGTGTCGTGCGGCTGTTCCTCTAAGACTAATCTCATTTGCCATC +
Preference number: 1 (lower is better)
Translates to: DFSLIQFPVADISSG*CRAAVPLRLISFAI
Trigger: GATGGCAAATGAGATTAGTCTTAGAGGAACAGCCGCACGACACCATCCGGAGCTTATATCAGCCACAGGAAATTGTATTAGGCTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 90 bp GATGCCTTCTGGGCAGCAGGAAAGATGTGGCCTGAATTTGTCCTTTaGTGCATGCATGGCGCAATAGAGTTCAAATCAAATCAAAATCTT +
Preference number: 1 (lower is better)
Translates to: DAFWAAGKMWPEFVL*CMHGAIEFKSNQNL
Trigger: AAGATTTTGATTTGATTTGAACTCTATTGCGCCATGCATGCATCAAAGGACAAATTCAGGCCACATCTTTCCTGCTGCCCAGAAGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 90 bp ACCAGTAAGAGGAGGAAGAAGAGATGGGAGAGAGAGAAAGAATACTaGCATTTCCTATTGCAGGAGGCTAGGCTTATCTTGTACTTAATA +
Preference number: 1 (lower is better)
Translates to: TSKRRKKRWEREKEY*HFLLQEARLILYLI
Trigger: TATTAAGTACAAGATAAGCCTAGCCTCCTGCAATAGGAAATGTCAGTATTCTTTCTCTCTCTCCCATCTCTTCTTCCTCCTCTTACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 90 bp AATAGAACAATGCACAGCCGAGTGAGATTTGGCATAGACGCATCCTaGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTT +
Preference number: 1 (lower is better)
Translates to: NRTMHSRVRFGIDAS*SQYMIMCHSLLYSL
Trigger: AAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGGCTGTGCATTGTTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGACCGGCTCGCTGAACTaGGGGAGGCCAGACAGAGAT +
Preference number: 2 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLTGSLN*GRPDRD
Trigger: ATCTCTGTCTGGCCTCCCCCAGTTCAGCGAGCCGGT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGCTCTCAGTTCTCTGCTaGTGCTCCCAAGCAGTCGGG +
Preference number: 2 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLLSVLC*CSQAVG
Trigger: CCCGACTGCTTGGGAGCAGCAGCAGAGAACTGAGAG...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGCTTCATGCAGCCTTTaGGGGCTATGTGAAGGCATT +
Preference number: 2 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDASCSL*GLCEGI
Trigger: AATGCCTTCACATAGCCCTCAAAGGCTGCATGAAGC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGTTCATCTTACCCGCTaGCTAATACAAGAAGCACCT +
Preference number: 2 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLVHLTR*LIQEAP
Trigger: AGGTGCTTCTTGTATTAGGCAGCGGGTAAGATGAAC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGTGGCCAGGGTGTGGCTaGAGCGTGAGGGGCTTCATG +
Preference number: 2 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLWPGCG*SVRGFM
Trigger: CATGAAGCCCCTCACGCTTCAGCCACACCCTGGCCA...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCAGGAATGACCTGAGATaGAGTTTGCTTCCGAGTATC +
Preference number: 2 (lower is better)
Translates to: DRLALTGTHYSLIDRLALRNDLR*SLLPSI
Trigger: GATACTCGGAAGCAAACTTCATCTCAGGTCATTCCT...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCCGATTAACGAGAGCCTaGCTGCAAATATATCCCGAA +
Preference number: 2 (lower is better)
Translates to: DRLALTGTHYSLIDRLALRLTRA*LQIYPE
Trigger: TTCGGGATATATTTGCAGCCAGGCTCTCGTTAATCG...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGAGATGTTCTCTTCCTaGATCACTGAAGAGAATGAT +
Preference number: 2 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLEMFSS*ITEEND
Trigger: ATCATTCTCTTCAGTGATCCAGGAAGAGAACATCTC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTCTAACATACTCTTCTaGAGAGGTTTTTACACAGTG +
Preference number: 2 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLSNILF*RGFYTV
Trigger: CACTGTGTAAAAACCTCTTCAGAAGAGTATGTTAGA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCATCCTGCCCCATCTTCTaGGGCACACGGAAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPSCPIF*GTRKRR
Trigger: CCTTCTCTTCCGTGTGCCTCAGAAGATGGGGCAGGA...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR GCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAAAGCTCTCAGTTCTCTaGTGCTGCTCCCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQKLSVL*CCSQAV
Trigger: GACTGCTTGGGAGCAGCAGCAGAGAACTGAGAGCTT...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGTCCCCAACAGAAGGGTaGTACAGTGTGTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLESPTEG*YSVSHL
Trigger: GAGATGAGACACACTGTAGCACCCTTCTGTTGGGGA...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGATCCTGGATGCCTTCTaGGCAGCAGGAAAGATGTGG +
Preference number: 2 (lower is better)
Translates to: IMCHSLLYSLPELKATGQILDAF*AAGKMW
Trigger: CCACATCTTTCCTGCTGCCCAGAAGGCATCCAGGAT...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGCTTCACACCAAGGCTaGGTTATCAGTGAGGCCGAT +
Preference number: 2 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRASHQG*VISEAD
Trigger: ATCGGCCTCACTGATAACCCAGCCTTGGTGTGAAGC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTCCATTCTACCAGGATaGTTCAGCTTGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWSILPG*FSLARV
Trigger: CACCCTGGCCAAGCTGAACCATCCTGGTAGAATGGA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR GCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGTCTAAGCATCCTGGATaGCTTCTGGGCAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: IMCHSLLYSLPELKATGQSKHPG*LLGSRK
Trigger: TTTCCTGCTGCCCAGAAGGCATCCAGGATGCTTAGA...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAGCTATATTCACTTCCTaGGCTGAAGGCCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPAIFTS*AEGHRA
Trigger: TGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGC...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGCATACAGGAATGACCTaGGATGAAGTTTGCTTCCGA +
Preference number: 2 (lower is better)
Translates to: IMCHSLLYSLPELKATGQHTGMT*DEVCFR
Trigger: TCGGAAGCAAACTTCATCTCAGGTCATTCCTGTATG...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGAGGAAAGATGTGGCCTaGATTTGTCCTTTGATGCAT +
Preference number: 2 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWRKDVA*ICPLMH
Trigger: ATGCATCAAAGGACAAATTCAGGCCACATCTTTCCT...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGACTGACATACAGGAATaGCCTGAGATGAAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRTDIQE*PEMKFA
Trigger: AGCAAACTTCATCTCAGGTCATTCCTGTATGTCAGT...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CAA 90 bp GGTGGTCCAAAGCATGTTAATAAATATCACTCTCACCCTTCACCATaGGTAAAGCTGTTTCTCACTATGCACGGGTTCAATACTGTAAAC +
Preference number: 2 (lower is better)
Translates to: GGPKHVNKYHSHPSP*VKLFLTMHGFNTVN
Trigger: GTTTACAGTATTGAACCCGTGCATAGTGAGAAACAGCTTTACCAATGGTGAAGGGTGAGAGTGATATTTATTAACATGCTTTGGACCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR TCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGAGTGAACGATCAAAGTaGCAGAACACAGATAAGGTC +
Preference number: 2 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPESERSK*QNTDKV
Trigger: GACCTTATCTGTGTTCTGTCACTTTGATCGTTCACT...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCAGTCAAGATATGGTTaGTATTCACAGGCACCTACT +
Preference number: 2 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPEQSRYG*YSQAPT
Trigger: AGTAGGTGCCTGTGAATACCAACCATATCTTGACTG...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCCCAGGATGGTTCAGCTaGGCCAGGGTGTGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: DRLALTGTHYSLIDRLALPGWFS*ARVWLK
Trigger: CTTCAGCCACACCCTGGCCAAGCTGAACCATCCTGG...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp AAGGTCCCAGAGGGCAACCTCATAGCACCGGCTCGCTaGACTGGGGGAGGCCAGACAGAGATGTTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: KVPEGNLIAPAR*TGGGQTEMFSS
Trigger: GGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTCAGCGAGCCGGTGCTATGAGGTTGCCCTCTGGGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 72 bp CCCAGAGGGCAACCTCATAGCACCGGCTCGCTGAACTaGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: PRGQPHSTGSLN*GRPDRDVLFLD
Trigger: ATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTCAGCGAGCCGGTGCTATGAGGTTGCCCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR GCA 72 bp CACCTTTGTCACGGAAAGCTCTCAGTTCTCTGCTGCTaGTCCCAAGCAGTCGGGGGTCCTGCCCCATCTTCT +
Preference number: 3 (lower is better)
Translates to: HLCHGKLSVLCC*SQAVGGPAPSS
Trigger: AGAAGATGGGGCAGGACCCCCGACTGCTTGGGAGCAGCAGCAGAGAACTGAGAGCTTTCCGTGACAAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 72 bp CCGCCCACCAAGGCTCTAAGCATCCTGGATGCCTTCTaGGCAGCAGGAAAGATGTGGCCTGAATTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: PPTKALSILDAF*AAGKMWPEFVL
Trigger: AAGGACAAATTCAGGCCACATCTTTCCTGCTGCCCAGAAGGCATCCAGGATGCTTAGAGCCTTGGTGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp CCCCAACAGAAGGGTGCTACAGTGTGTCTCATCTCTTaGAAGACACTGGATGGAGAGGGAAGCAGGCAACAG +
Preference number: 3 (lower is better)
Translates to: PQQKGATVCLIS*KTLDGEGSRQQ
Trigger: CTGTTGCCTGCTTCCCTCTCCATCCAGTGTCTTTCAAGAGATGAGACACACTGTAGCACCCTTCTGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp CCTGGATGCCTTCTGGGCAGCAGGAAAGATGTGGCCTaGATTTGTCCTTTGATGCATGCATGGCGCAATAGA +
Preference number: 3 (lower is better)
Translates to: PGCLLGSRKDVA*ICPLMHAWRNR
Trigger: TCTATTGCGCCATGCATGCATCAAAGGACAAATTCAGGCCACATCTTTCCTGCTGCCCAGAAGGCATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 72 bp AGGGTGCTACAGTGTGTCTCATCTCTTGAAAGACACTaGATGGAGAGGGAAGCAGGCAACAGGCATTTCTCC +
Preference number: 3 (lower is better)
Translates to: RVLQCVSSLERH*MEREAGNRHFS
Trigger: GGAGAAATGCCTGTTGCCTGCTTCCCTCTCCATCCAGTGTCTTTCAAGAGATGAGACACACTGTAGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 72 bp ACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTaGTATTCACAGGCACCTACTGATAGACAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: TSAASLSQSRYG*YSQAPTDRQAG
Trigger: GCCAGCCTGTCTATCAGTAGGTGCCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR GCA 72 bp TTGTCGTGTGGCGAATCTAACTCTATGGTGTCTCTTTaGCGGCACGTCTACAACTCTCTTGCTTCACACCAA +
Preference number: 3 (lower is better)
Translates to: LSCGESNSMVSL*RHVYNSLASHQ
Trigger: TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTTAGATTCGCCACACGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 72 bp TGCTACAGTGTGTCTCATCTCTTGAAAGACACTGGATaGAGAGGGAAGCAGGCAACAGGCATTTCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: CYSVSHLLKDTG*RGKQATGISPS
Trigger: TGAAGGAGAAATGCCTGTTGCCTGCTTCCCTCTCCATCCAGTGTCTTTCAAGAGATGAGACACACTGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR-3UTR CAA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAAGATGTGGCCTGAATTaGTCCTTTGATGCATGCATG +
Preference number: 3 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQRCGLN*SFDACM
Trigger: CATGCATGCATCAAAGGACAAATTCAGGCCACATCT...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp GAGATGTTCTCTTCCTGGATCACTGAAGAGAATGATTaGCAGCCATGGCCACCTCCAAGTCAATTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: EMFSSWITEEND*QPWPPPSQFLE
Trigger: CTCCAGAAATTGACTTGGAGGTGGCCATGGCTGTCAATCATTCTCTTCAGTGATCCAGGAAGAGAACATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp GGCACTCACAGGTTGATACCCACTGACATACAGGAATaGCCTGAGATGAAGTTTGCTTCCGAGTATCTCCAT +
Preference number: 3 (lower is better)
Translates to: GTHRLIPTDIQE*PEMKFASEYLH
Trigger: ATGGAGATACTCGGAAGCAAACTTCATCTCAGGTCATTCCTGTATGTCAGTGGGTATCAACCTGTGAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp AGCGTGAGGGGCTTCATGCAGCCTTTGAGGGCTATGTaGAGGCATTCATTTTGGTATAAATGTATTCACTGG +
Preference number: 3 (lower is better)
Translates to: SVRGFMQPLRAM*RHSFWYKCIHW
Trigger: CCAGTGAATACATTTATACCAAAATGAATGCCTTCACATAGCCCTCAAAGGCTGCATGAAGCCCCTCACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp TGGGCAGCAGGAAAGATGTGGCCTGAATTTGTCCTTTaGTGCATGCATGGCGCAATAGAGTTCAAATCAAAT +
Preference number: 3 (lower is better)
Translates to: WAAGKMWPEFVL*CMHGAIEFKSN
Trigger: ATTTGATTTGAACTCTATTGCGCCATGCATGCATCAAAGGACAAATTCAGGCCACATCTTTCCTGCTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CCA 72 bp ATGCACAGCCGAGTGAGATTTGGCATAGACGCATCCTaGTCACAATATATGATAATGTGCCATTCGTTGCTA +
Preference number: 3 (lower is better)
Translates to: MHSRVRFGIDAS*SQYMIMCHSLL
Trigger: TAGCAACGAATGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGGCTGTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR GCA 72 bp GGCATAGACGCATCCTGGTCACAATATATGATAATGTaGCATTCGTTGCTATATTCACTTCCTGAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: GIDASWSQYMIM*HSLLYSLPELK
Trigger: CTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR TCA 72 bp GAGAACAATTGCTCTGACTATCTTCAGAAGATGAACTaGAAGCTAAGCAGTGGAAGTTCCTATACTGTTGGC +
Preference number: 3 (lower is better)
Translates to: ENNCSDYLQKMN*KLSSGSSYTVG
Trigger: GCCAACAGTATAGGAACTTCCACTGCTTAGCTTTCAGTTCATCTTCTGAAGATAGTCAGAGCAATTGTTCTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGAGCCGGGCTGCCCTCTaGAGCCCCTCGCGAATGCAG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLSRAAL*SPSRMQ
Trigger: CTGCATTCGCGAGGGGCTCCAGAGGGCAGCCCGGCT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTGGACACGGTGGCCTTaGTGGGCTCCCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLWTRWP*WAPQGQ
Trigger: CTGCCCTTGGGGAGCCCAGCAAGGCCACCGTGTCCA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGAGCACCGATCTCCCCTaGGAGGGAGGGCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLSTDLP*EGGRAP
Trigger: AGGAGCACGCCCTCCCTCGCAGGGGAGATCGGTGCT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGAAGGCGAAAGGGTCTaGGGCTGCTCCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLEGERV*GCSFRV
Trigger: GACCCTGAAGGAGCAGCCTCAGACCCTTTCGCCTTC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCACCCAGGGACTGAAGTaGTGCACCGGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALTQGLK*CTGASS
Trigger: GCTGCTGGCCCCGGTGCAGCACTTCAGTCCCTGGGT...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAACAAGGTGGCCATaGCGGAGCCCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLITRWP*RSPATT
Trigger: GGTGGTGGCTGGGCTCCGGCATGGCCACCTTGTTAT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGGCGGAGGGAAAATGTaGGGCCCGGATGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDGGGKM*GPDGQL
Trigger: CAGCTGACCATCCGGGCCTCACATTTTCCCTCCGCC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGAAGTCCATCATCACCTaGGCAGACCCCTGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLKSIIT*ADPCLV
Trigger: CACGAGGCAGGGGTCTGCGCAGGTGATGATGGACTT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTCCCGCCCATGGGCATaGTCAAAAGGACCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLSRPWA*SKGPGK
Trigger: CTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACTTCAAGTCGAAATGCTaGCAGCCGCCCACGCCCACG +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDFKSKC*QPPTPT
Trigger: CGTGGGCGTGGGCGGCTGGCAGCATTTCGACTTGAA...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGACTTCAAGTCGAAATaGTGCCAGCCGCCCACGCCC +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDDFKSK*CQPPTP
Trigger: GGGCGTGGGCGGCTGGCAGCATTTCGACTTGAAGTC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGCGGACTCCCAGCTCCTaGAATGCTTTGCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLRTPSS*NALQSI
Trigger: GATGGACTGCAAAGCATTCCAGGAGCTGGGAGTCCG...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGTGTCCGTGGGAGGCTaGGTCACTGTGTACTGTAAC +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLVSVGG*VTVYCN
Trigger: GTTACAGTACACAGTGACCCAGCCTCCCACGGACAC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTCAAACAGACGCTCCTaGTCCGAGTCTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLSNRRS*SESSEG
Trigger: TCCCTCTGAAGACTCGGATCAGGAGCGTCTGTTTGA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCGCTGCAGGTAAAGGGTaGAGGTGCCAGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALAAGKG*RCQEPH
Trigger: ATGTGGCTCCTGGCACCTTCACCCTTTACCTGCAGC...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCGAAACTGGGCTTGGGTaGAGTGTTCTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALETGLG*SVLRSS
Trigger: GGAGGAGCGGAGAACACTGCACCCAAGCCCAGTTTC...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGGGCTGCCGATCCCATaGTTCCACAAGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDGLPIP*FHKMAV
Trigger: CACTGCCATCTTGTGGAACCATGGGATCGGCAGCCC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTGTGAGTCGGAGCTCTaGCTTCAAGTCGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLCESEL*LQVEML
Trigger: CAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGGGTCGCGGGAAGGGCTaGGAGCACCCAGGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEGRGKG*EHPGAS
Trigger: ACTCGCACCTGGGTGCTCGCAGCCCTTCCCGCGACC...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGCGCTTGGGACTCAAGTaGCCCGGCCGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRRLGLK*PGRWAS
Trigger: GCTGGCCCAGCGGCCGGGCCACTTGAGTCCCAAGCG...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGGCCACTGCCCAGTTCTaGAGGGAGACGGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMATAQF*RETVHG
Trigger: CCCGTGGACCGTCTCCCTCCAGAACTGGGCAGTGGC...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCCATTTATGGACACGGTaGCCTTGCTGGGCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALHLWTR*PCWAPQ
Trigger: TTGGGGAGCCCAGCAAGGCCACCGTGTCCATAAATG...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGAGGTTGGCAAAGTCTaGGTCCTCTGGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDEVGKV*VLWASV
Trigger: TACACTGGCCCAGAGGACCCAGACTTTGCCAACCTC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTACTTTCACTTTCACTaGCCACCAGGTTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLYFHFH*PPGCGW
Trigger: CCATCCACAACCTGGTGGTCAGTGAAAGTGAAAGTA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACAGGTTGGAGCATTTGTaGTTCCCAACTCTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDRLEHL*FPTLVP
Trigger: CGGCACGAGAGTTGGGAATCACAAATGCTCCAACCT...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGAACCTGAGAGAAAAATaGAGGCTGTCTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLNLREK*RLSLSS
Trigger: GGAGGACAGAGACAGCCTGCATTTTTCTCTCAGGTT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGCATGGTTCCACAAGATaGCAGTGTCGTACACGAATG +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLHGSTR*QCRTRM
Trigger: CATTCGTGTACGACACTGCCATCTTGTGGAACCATG...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGGATCGCTGACCTGTTaGAATCGAATGTCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLGSLTC*NRMSRS
Trigger: TGACCTTGACATTCGATTCCAACAGGTCAGCGATCC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACTCTTTGTCATCATGCTaGTACACAACCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDSLSSC*YTTWPA
Trigger: GGCTGGCCAGGTTGTGTATCAGCATGATGACAAAGA...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACCCATCGGATCCAGGCTaGTTCACTAAGAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDPSDPG*FTKRTA
Trigger: AGCTGTTCTCTTAGTGAATCAGCCTGGATCCGATGG...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGCAGAGCTGGGACTATTaGGCTCCCAGGGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMQSWDY*APRAGC
Trigger: GCATCCTGCCCTGGGAGCTCAATAGTCCCAGCTCTG...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACTACAATGGCCTTGGTTaGCTGTGTCTCTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDYNGLG*LCLCHH
Trigger: ATGGTGGCAGAGACACAGGCAACCAAGGCCATTGTA...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATCCTCACAAGCACCTaGAAGTGTTCGCGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLILTST*KCSRFR
Trigger: TCTAAAACGCGAACACTTCCAGGTGCTTGTGAGGAT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGCACGAGGCCCTGGTCTaGCCGGGGTTGAACTGTACC +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEHEALV*PGLNCT
Trigger: GGTACAGTTCAACCCCGGCCAGACCAGGGCCTCGTG...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGCCTCTCTCATGGGGCTaGTCACACCGTCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEPLSWG*SHRQGQ
Trigger: CTGGCCCTGACGGTGTGACCAGCCCCATGAGAGAGG...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCAATGCGCATGCTGGTTaGGTAAAGAGAGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALNAHAG*VKRALQ
Trigger: CTGCAAGGCTCTCTTTACCCAACCAGCATGCGCATT...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCCACCAATGCGCATGCTaGTTGGGTAAAGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALHQCAC*LGKESL
Trigger: AAGGCTCTCTTTACCCAACCAGCATGCGCATTGGTG...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCGCTTCCAGAGCCCTTTaGAGTATCCTTGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALASRAL*SILALS
Trigger: ACTAAGGGCAAGGATACTCCAAAGGGCTCTGGAAGC...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGGGAGGGCGTGCTCCTaGCTGCTCTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRGRACS*LLSSSS
Trigger: GCTGGAAGAAGAGAGCAGTCAGGAGCACGCCCTCCC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACGGAGCCCCTCGCGAATaGAGCTCGACCACCATAGGC +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDGAPRE*SSTTIG
Trigger: GCCTATGGTGGTCGAGCTGCATTCGCGAGGGGCTCC...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTGTTTTAGAGCCGGGCTaGCCTCTGGAGCCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSVLEPG*PLEPLA
Trigger: CGCGAGGGGCTCCAGAGGGCAGCCCGGCTCTAAAAC...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCTCTGTTATATCCTGTTaGCGCCACTCTGTCACCGTT +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALSVISC*RHSVTV
Trigger: AACGGTGACAGAGTGGCGGCAACAGGATATAACAGA...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGCAAAGCGGATCACGCTaGTGTGGTCCTCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWQSGSR*CGPRAW
Trigger: CCAGGCCCGAGGACCACAGCAGCGTGATCCGCTTTG...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGCCACGAAACTGGGCTTaGGTGCAGTGTTCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMPRNWA*VQCSPL
Trigger: GAGCGGAGAACACTGCACCCAAGCCCAGTTTCGTGG...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACCGGATCACGCTGCTGTaGTCCTCGGGCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDRITLL*SSGLEM
Trigger: CATCTCCAGGCCCGAGGACCACAGCAGCGTGATCCG...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCATGCTCAAAAGGACCTaGAAAGTCTCCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALMLKRT*KVSSSS
Trigger: CGAAGAGGAGGAGACTTTCCAGGTCCTTTTGAGCAT...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGACACGGTGGCCTTGCTaGGCTCCCCAAGGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALTRWPC*APQGQR
Trigger: ACGCTGCCCTTGGGGAGCCCAGCAAGGCCACCGTGT...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGGACGTAGCTTACCAGTaGCAGGAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEDVAYQ*QEQQQQ
Trigger: CTGCTGCTGCTGCTCCTGTCACTGGTAAGCTACGTC...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGGATGTCCCTCTGGGTaGACTGCTCAGCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRGCPSG*TAQLEL
Trigger: GAGCTCCAGCTGAGCAGTTCACCCAGAGGGACATCC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGAATCTAAATTGCGACTaGTTCCCACATAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLNLNCD*FPHSLF
Trigger: GAACAGACTATGTGGGAATCAGTCGCAATTTAGATT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTAAGGCAGAGCTGCCCTaGGGCGTGCCAAGTACCAGG +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSKAELP*GVPSTR
Trigger: CCTGGTACTTGGCACGCCTCAGGGCAGCTCTGCCTT...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGCCAGGCACACGGGGCTaGCAGAGACCTTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALPGTRG*QRPSSL
Trigger: CAGAGAGGAAGGTCTCTGTCAGCCCCGTGTGCCTGG...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGCTCTGGGGTTGCAGGTaGCTGGCAGACGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRLWGCR*LADGTP
Trigger: AGGAGTACCGTCTGCCAGTCACCTGCAACCCCAGAG...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGAGGAACTGGACCTGGTaGCTGCCTCCTCCATCGGAC +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQRNWTW*LPPPSD
Trigger: GTCCGATGGAGGAGGCAGGCACCAGGTCCAGTTCCT...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACGAAGGGGACAGCCACTaGCCAGTTCTGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDEGDSH*PVLEGD
Trigger: GTCTCCCTCCAGAACTGGGCAGTGGCTGTCCCCTTC...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAGGGGAACTCCAGGATTaGCAGCACAGGCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQGELQD*QHRLRE
Trigger: CTCTCGGAGCCTGTGCTGGCAATCCTGGAGTTCCCC...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTCGGACGTCCGCACAGTaGTGGTGGCTGTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSRTSAQ*WWLSLA
Trigger: AGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCG...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGCTCCAAAGGCAGAGCTaGCCTGAGGCGTGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLELQRQS*PEACQV
Trigger: TACTTGGCACGCCTCAGGGCAGCTCTGCCTTTGGAG...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCCCAGAATAACAAGGTaGCCATGCCGGAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLPRITR*PCRSPA
Trigger: GGCTGGGCTCCGGCATGGCCACCTTGTTATTCTGGG...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAAGACCCTGCTCTTCCTaGGGGACATGCCTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQRPCSS*GTCLWR
Trigger: CCGCCAAAGGCATGTCCCCCAGGAAGAGCAGGGTCT...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGGTCTCACGCAGGATGTaGTGGCCCTTCTCCTCAACG +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEVSRRM*WPFSST
Trigger: CGTTGAGGAGAAGGGCCACCACATCCTGCGTGAGAC...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCTGTCCTCTCTGCCTTTaGAGGGATCATCGTATATCA +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALCPLCL*RDHRIS
Trigger: TGATATACGATGATCCCTCCAAAGGCAGAGAGGACA...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGAGTCGACCTCTCTCATaGGGCTGGTCACACCGTCAG +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLESRPLS*GWSHRQ
Trigger: CTGACGGTGTGACCAGCCCCATGAGAGAGGTCGACT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCTGTAGTCCAGCAGGTTaGAGCATTTGTGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALCSPAG*SICDSQ
Trigger: TTGGGAATCACAAATGCTCCAACCTGCTGGACTACA...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACACTTGGAACTGGAACTaGGCCACTCGGGCTGCGACT +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDTWNWN*ATRAAT
Trigger: AGTCGCAGCCCGAGTGGCTCAGTTCCAGTTCCAAGT...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTGGCCTCCCAGGACAGTaGCAAGGCTCACTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSGLPGQ*QGSLQS
Trigger: GCTCTGAAGTGAGCCTTGTCACTGTCCTGGGAGGCC...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTCTCCTGGCTGCACCTaGAGCACCAAGTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWSPGCT*STKSRN
Trigger: GTTGCGTGACTTGGTGCTGCAGGTGCAGCCAGGAGA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTTCAGACCTGACAAGATaGCCACGCGGCACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSSDLTR*PRGTPR
Trigger: CCGAGGAGTGCCGCGTGGGCATCTTGTCAGGTCTGA...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAATGGCGGAGAAGCAGGTaGCCCAAGCTTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQWRRSR*PKLEKG
Trigger: ACCCTTCTCAAGCTTGGGGCACCTGCTTCTCCGCCA...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGACTCCAGGCTCCTCTTaGCAATGCCTCGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLETPGSS*QCLDGC
Trigger: ACACCCATCGAGGCATTGGCAAGAGGAGCCTGGAGT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGCTGATGACCAAGTTCTaGGGTCCACTGCCTATGGGA +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMLMTKF*GPLPMG
Trigger: TCCCATAGGCAGTGGACCCCAGAACTTGGTCATCAG...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAAACAGGAACTGGACCTaGTGCCTGCCTCCTCCATCG +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQNRNWT*CLPPPS
Trigger: CGATGGAGGAGGCAGGCACCAGGTCCAGTTCCTGTT...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCACTGTCAGCCCAGTGTTaGCGTTCAGGACCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPLSAQC*RSGPAA
Trigger: AGCCGCCGGTCCTGAACGCCAACACTGGGCTGACAG...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAATCCGCACAGTGCTGGTaGCTGTCCCTTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQSAQCW*LSLAVC
Trigger: ACACACAGCAAGGGACAGCCACCAGCACTGTGCGGA...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGAACCACCGACTCTCCTaGTCTGCTGGGCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWNHRLS*SAGLSD
Trigger: GTCACTGAGCCCAGCAGACCAGGAGAGTCGGTGGTT...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGGGGTTGCAGGTGACTaGCAGACGGTACTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQGVAGD*QTVLLV
Trigger: AACCAGGAGTACCGTCTGCCAGTCACCTGCAACCCC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGGGAGGAATTCTTCCGTaGGGGACCTGCCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWGGILP*GTCLLP
Trigger: TGGCAAGAGGCAGGTCCCCCACGGAAGAATTCCTCC...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACGTTTCACCACCACCATaGAGGCGAAAGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDVSPPP*RRKGLR
Trigger: CCTCAGACCCTTTCGCCTTCATGGTGGTGGTGAAAC...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCCAGCCAGCTGGAGCTaGGTGAAAGAAGTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLPASWS*VKEVMD
Trigger: GTCCATCACTTCTTTCACTCAGCTCCAGCTGGCTGG...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTGTCAAGGTCAAAGGTaGCAGGCTCTCTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWCQGQR*QALWGC
Trigger: GCAACCCCAGAGAGCCTGTCACCTTTGACCTTGACA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGTCGCCACGGGATCGCTaGCCTGTTGGAATCGAATGT +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLSPRDR*PVGIEC
Trigger: ACATTCGATTCCAACAGGTCAGCGATCCCGTGGCGA...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGCTCCTCCATCGGACATaGGCAGCACCAAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQLLHRT*AAPSCH
Trigger: GTGACAACTTGGTGCTGCGCATGTCCGATGGAGGAG...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAACTCACAGAAGACCTGTaGTGGATGTCACCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQLTEDL*WMSPLL
Trigger: CAGGAGCGGTGACATCCAGCACAGGTCTTCTGTGAG...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAGGGCGTGCTCCTGACTaGTCTCTTCTTCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQGRAPD*SLLPAL
Trigger: AAGAGCTGGAAGAAGAGAGCAGTCAGGAGCACGCCC...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGGCTCCCAGGGCAGGATaGCGTCAGGAGGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALAPRAG*RQEEFF
Trigger: GAAGAATTCCTCCTGACGGCATCCTGCCCTGGGAGC...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGAAGTGGCCCGGCCGCTaGGCCAGCGCGTCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPEKWPGR*ASASLS
Trigger: AGACAACGACGCGCTGGCCCAGCGGCCGGGCCACTT...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGTTCAGGACCGGCGGCTaGTCATCCACAGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRFRTGG*SSTGTK
Trigger: TTTAGTGCCTGTGGATGACCAGCCGCCGGTCCTGAA...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGTGATTGGCACCACATaGTGTCTGTCGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQVIGTT*CLSLTS
Trigger: GGAGGTCAGCGACAGACACCATGTGGTGCCAATCAC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGATCATGAACCCTAAATaGCCAGTGGCCAGGGTACGA +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMIMNPK*PVARVR
Trigger: TCGTACCCTGGCCACTGGCCATTTAGGGTTCATGAT...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCATTTCAACAGTGTGTTaGGTTTCTCCCTCCTTAAAC +
Preference number: 4 (lower is better)
Translates to: DRLALTGTHYSLIDRLALISTVC*VSPSLN
Trigger: GTTTAAGGAGGGAGAAACCCAACACACTGTTGAAAT...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGAAAGTCTGGGTCCTCTaGGCCAGTGTAGCGCAACTT +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEKVWVL*ASVAQL
Trigger: AAGTTGCGCTACACTGGCCCAGAGGACCCAGACTTT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACGCTCTCTTGTGGAGATaGCAGGGAGCATGCCGTCTA +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDALLWR*QGACRL
Trigger: TAGACGGCATGCTCCCTGCCATCTCCACAAGAGAGC...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGCTCTCCAATGACCTCTaGGTTCTTTGTGGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMLSNDL*VLCGVG
Trigger: ACCAACGCCACAAAGAACCCAGAGGTCATTGGAGAG...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGAATGTGAGGCCCGGATaGTCAGCTGACACGATCAGT +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLENVRPG*SADTIS
Trigger: ACTGATCGTGTCAGCTGACCATCCGGGCCTCACATT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGCCTGGTTGGATGGAGTaGTGCAGGGTACCAACTTTA +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMPGWME*CRVPTL
Trigger: TAAAGTTGGTACCCTGCACCACTCCATCCAACCAGG...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGCCTGCCCAAATCCCATaGACCCATCAGACAACCAGA +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEPAQIP*THQTTR
Trigger: TCTGGTTGTCTGATGGGTCCATGGGATTTGGGCAGG...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACCGTTCGCTCGTAAAATaGCCCTTGCTTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDRSLVK*PLLLPQ
Trigger: CTGTGGCAGAAGCAAGGGTCATTTTACGAGCGAACG...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAACGAAGCTGTCCATTTTaGCCTCATCCTCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQRSCPF*PHPQPC
Trigger: ACACGGCTGAGGATGAGGTCAAAATGGACAGCTTCG...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAACGCCCATCGGTGACTTaGAACTCGAAGCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQRPSVT*NSKLSI
Trigger: AATGGACAGCTTCGAGTTTCAAGTCACCGATGGGCG...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGACTGAGCCTCTGTTTTaGAGTTCACAGCCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLTEPLF*SSQPGV
Trigger: GACGCCTGGCTGTGAACTTCAAAACAGAGGCTCAGT...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGGGTCCACGGGATGAATaGGTATTACAAACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMGPRDE*VLQTSG
Trigger: TCCAGAGGTTTGTAATACGCATTCATCCCGTGGACC...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGAGCCGTCATCCCCCGTaGATAAGAACACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLESRHPP*IRTPSQ
Trigger: TTGAGAAGGTGTTCTTATGCACGGGGGATGACGGCT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGACATCATGGGCTCAGTaGTTCCAGAGCCCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWTSWAQ*FQSPLE
Trigger: CTCCAAAGGGCTCTGGAAGCACTGAGCCCATGATGT...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACGTCACAATCTCCAGCTaGGTGAAGACCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDVTISS*VKTTST
Trigger: GGTGGAAGTGGTCTTCACCCAGCTGGAGATTGTGAC...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGATAGGGAACAGGAACTaGACCTGGTGCCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALIGNRN*TWCLPP
Trigger: AGGAGGCAGGCACCAGGTCCAGTTCCTGTTCCCTAT...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGCTCAGTGGTGTGAGCTaGGATTCCTGTACCACCATC +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWLSGVS*DSCTTI
Trigger: GATGGTGGTACAGGAATCCCAGCTCACACCACTGAG...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACTGGGCTTGGGTAAAATaGCTCACCACCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDWAWVK*LTTTEG
Trigger: TCCCTCAGTGGTGGTGAGCCATTTTACCCAAGCCCA...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCATCACGCAGGATGTGGTaGCCCTTCTCCTCAACGGTG +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPSRRMW*PFSSTV
Trigger: CACCGTTGAGGAGAAGGGCCACCACATCCTGCGTGA...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGGCCAATCTCACCACTaGTGTGAGCGTAGACAACAG +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQGQSHH*CERRQQ
Trigger: CTGTTGTCTACGCTCACACCAGTGGTGAGATTGGCC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGCTGACCACCAGGTTGTaGATGGTGACCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRLTTRL*MVTTGF
Trigger: AAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAG...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGAGGCAGAGTCATTTATaGACACGGTGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQRQSHL*TRWPCW
Trigger: CCAGCAAGGCCACCGTGTCCATAAATGACTCTGCCT...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGTACTCCTGGTTGGATaGAGTGGTGCAGGGTACCAA +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQVLLVG*SGAGYQ
Trigger: TTGGTACCCTGCACCACTCCATCCAACCAGGAGTAC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGGTGGCTTGTGTCTCTaGCTGAGCCTTATCCACGAT +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRGGLCL*LSLIHD
Trigger: ATCGTGGATAAGGCTCAGCCAGAGACACAAGCCACC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGACTCAGACTGGGGAATaGACACGGTTGATTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRTQTGE*TRLIRL
Trigger: GAGACGAATCAACCGTGTTCATTCCCCAGTCTGAGT...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGTTTTAGGTGAACAGTaGAGGCCTCCCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQVLGEQ*RPPSSL
Trigger: GAGAGATGAGGGAGGCCTTCACTGTTCACCTAAAAC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTGGACAGAAGGAAAGGTaGCATCTGCCATGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSGQKER*HLPCCG
Trigger: TCCACAGCATGGCAGATGTCACCTTTCCTTCTGTCC...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGAGCAAGGACACAATGTaGGGGACAGAAGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRSKDTM*GTEGKV
Trigger: CACCTTTCCTTCTGTCCCTCACATTGTGTCCTTGCT...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGATAGGTCTCTCCAATaGCCTCTGGGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQDRSLQ*PLGSLW
Trigger: CCACAAAGAACCCAGAGGTCATTGGAGAGACCTATC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTGTCGTACACGAATGTaGGTCGGAGCTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWCRTRM*VGALTS
Trigger: TGAAGTCAGAGCTCCGACTCACATTCGTGTACGACA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGGCTCCTGGAATGCTTTaGAGTCCATCAAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEAPGML*SPSKGS
Trigger: AGACCCTTTTGATGGACTGCAAAGCATTCCAGGAGC...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGGTCTGTTCCAGCATCTaGAGAGAGGGATTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMVCSSI*REGFCF
Trigger: AAAACAGAATCCCTCTCTGCAGATGCTGGAACAGAC...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGAGCATGCCGTCTATGTaGGGCATAGTGACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLSMPSM*GIVTVS
Trigger: ACTCACTGTCACTATGCCGCACATAGACGGCATGCT...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGAATCACATCCCCTTCTaGAAAAGCCACGTCGCTTTC +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLENHIPF*KSHVAF
Trigger: GAAAGCGACGTGGCTTTTGCAGAAGGGGATGTGATT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACCACTCTGAGAGTGATTaGCACCACATGGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDHSESD*HHMVSV
Trigger: GACAGACACCATGTGGTGCCAATCACTCTCAGAGTG...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGTGTGGACTCTCACGATaGAGACCTTTGAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLECGLSR*RPLKCL
Trigger: GAGACACTTCAAAGGTCTCCATCGTGAGAGTCCACA...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCATGGACAGCTCTCTTGTaGAGATGGCAGGGAGCATGC +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPWTALL*RWQGAC
Trigger: GCATGCTCCCTGCCATCTCCACAAGAGAGCTGTCCA...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGGGTCAGCTCAAAGTTaGACAGCTCTCTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRGSAQS*TALLWR
Trigger: TCTCCACAAGAGAGCTGTCCAACTTTGAGCTGACCC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGACTCCACTGCTGGACTaGCTGATTGTAGGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRTPLLD*LIVGWF
Trigger: GAACCAACCTACAATCAGCCAGTCCAGCAGTGGAGT...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCACAATCTCCAGCTGGGTaGAGACCACTTCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPQSPAG*RPLPPL
Trigger: TAGAGGTGGAAGTGGTCTTCACCCAGCTGGAGATTG...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGCTAGCATGTCTGGAGTaGGAGCAGTCAGTACAAACT +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRLACLE*EQSVQT
Trigger: AGTTTGTACTGACTGCTCTCACTCCAGACATGCTAG...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGATCCGTTGTCAGAGTaGCTTTGCCACCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQDPLSE*LCHLLS
Trigger: TGAAAGAAGGTGGCAAAGTCACTCTGACAACGGATC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGCAGATCTGGTATTGTTaGAGAGGAGGTGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQQIWYC*RGGDRE
Trigger: TTCACGGTCACCTCCTCTTCAACAATACCAGATCTG...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGCAAGGTCATCCAGAATaGCCACTCGAACAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALQGHPE*PLEQSA
Trigger: TGCAGACTGTTCGAGTGGTCATTCTGGATGACCTTG...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTCACCAGGGAGGAATGTaGCAGTGGAAACATCGGTAT +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSHQGGM*QWKHRY
Trigger: ATACCGATGTTTCCACTGTCACATTCCTCCCTGGTG...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACTTTGAAGTGTCTCCTTaGCGGATGACCGGGATTTTG +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDFEVSP*RMTGIL
Trigger: CAAAATCCCGGTCATCCGTCAAGGAGACACTTCAAA...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGACTGGACCTGGTGCCTaGCTCCTCCATCGGACATGC +
Preference number: 4 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPETGPGA*LLHRTC
Trigger: GCATGTCCGATGGAGGAGGCAGGCACCAGGTCCAGT...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGTTCAGGGTCATCCACTaGCAGTTTGGCGTTAAACAG +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLFRVIH*QFGVKQ
Trigger: CTGTTTAACGCCAAACTGGCAGTGGATGACCCTGAA...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTGGTCACATTGGCTCCTaGAAACTTGTCACCGATCCT +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSGHIGS*KLVTDP
Trigger: AGGATCGGTGACAAGTTTCCAGGAGCCAATGTGACC...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACAATTCCCTCCAGTATTaGTCGTCCAAGGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDNSLQY*SSKVIQ
Trigger: CTGGATGACCTTGGACGACCAATACTGGAGGGAATT...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAATGGTTAGGGGGATCATaGTTGTCTTGGACTCTAAAC +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQWLGGS*LSWTLN
Trigger: GTTTAGAGTCCAAGACAATCATGATCCCCCTAACCA...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCATTTTCCTCAGTGGTGTaGGCTGGGATTCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPFSSVV*AGIPVP
Trigger: TGGTACAGGAATCCCAGCTCACACCACTGAGGAAAA...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACCCGATTCTCCATTCTTaGGACATAGCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDPILHS*DIADRL
Trigger: GAGTCTATCAGCTATGTCTCAAGAATGGAGAATCGG...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGGAACTCTCTATAATCTaGTCCAGGGTGAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEELSII*SRVKLS
Trigger: TGAAAGCTTCACCCTGGATCAGATTATAGAGAGTTC...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCACCAGGTTGTGGATGGTaGCCACTGGCTTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPPGCGW*PLAFCC
Trigger: ACAACAAAAAGCCAGTGGTCACCATCCACAACCTGG...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAACCCGGGAGCCAGGCTaGAAGTATATGGAGTCTAAT +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPTREPG*KYMESN
Trigger: ATTAGACTCCATATACTTTCAGCCTGGCTCCCGGGT...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGTCCCAGCTCCTGGAATaGTTTGCAGTCCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALSQLLE*FAVHQK
Trigger: CTTTTGATGGACTGCAAAGCATTCCAGGAGCTGGGA...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGTGTTCAAGTCACTTGTaGTCAGCAGATCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRCSSHL*SADPLS
Trigger: TGACAACGGATCTGCTGAGCACAAGTGACTTGAACA...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGACACCTTCTCAATGCTaGAGTAAAAGGAGTCACCGA +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLTPSQC*SKRSHR
Trigger: TCGGTGACTCCTTTTACTGCAGCATTGAGAAGGTGT...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGAGAACACCTTCTCAATaGTGCAGTAAAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLERTPSQ*CSKRSH
Trigger: GTGACTCCTTTTACTGCAGCATTGAGAAGGTGTTCT...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGAAAATCAAAAGGTCTaGGTCGGATTCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRENQKV*VGFSIL
Trigger: GAGGATGCTGAATCCGACCCAGACCTTTTGATTTTC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTTTATGTCCTCCAAGTaGAATTGTCCGCCTACATGC +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWFMSSK*NCPPTC
Trigger: GCATGTAGGCGGACAATTCCACTTGGAGGACATAAA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGCCTCATGAACATTTCTaGCTGCTCGTCATTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALPHEHF*LLVIGR
Trigger: CCTACCAATGACGAGCAGCCAGAAATGTTCATGAGG...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTGTGGATGGTGACCACTaGCTTTTTGTTGTCTACGTC +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSVDGDH*LFVVYV
Trigger: GACGTAGACAACAAAAAGCCAGTGGTCACCATCCAC...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTTCTGAGCTTTACCCTTaGAGTCTCTGTCTTTTTCCG +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSSELYP*SLCLFP
Trigger: CGGAAAAAGACAGAGACTTCAAGGGTAAAGCTCAGA...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGAACTGTACCTGTTTCTaGGCTTTACCCTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQNCTCF*ALPLKS
Trigger: AGACTTCAAGGGTAAAGCTCAGAAACAGGTACAGTT...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACAAACTCGATTTCTTCTaGCACAGGGTGATAATCCTC +
Preference number: 4 (lower is better)
Translates to: SWVELALVMTSCCLHGLDKLDFF*HRVIIL
Trigger: GAGGATTATCACCCTGTGTCAGAAGAAATCGAGTTT...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAGGGTCAAAGTGTCGTTaGTGTTCTCACTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPGSKCR*CSHWHK
Trigger: TTTGTGCCAGTGAGAACATCAACGACACTTTGACCC...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGTCCAGTAGGAAATTCTaGCATGCTTTATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRSSRKF*HALCPP
Trigger: TGGAGGACATAAAGCATGGCAGAATTTCCTACTGGA...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGAGGAAAGGTGACATCTaGCATGCTGTGGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALRKGDI*HAVDFF
Trigger: GAAGAAATCCACAGCATGGCAGATGTCACCTTTCCT...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAGCAGTCAGTACAAACTaGTCCACCTCCATCATCATC +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPAVSTN*STSIII
Trigger: GATGATGATGGAGGTGGACCAGTTTGTACTGACTGC...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTGTTTTCTCATAGTCTaGATATTTGGGGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWCFLIV*IFGVAG
Trigger: GCCTGCAACCCCAAATATCCAGACTATGAGAAAACA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
3UTR CAA 72 bp GTCATGACTTCATGTTGTCTTCACGGATTAGACAACTaGTCATTTCCGTGTGTTTGTCACGCTTCGGGCCTA +
Preference number: 4 (lower is better)
Translates to: VMTSCCLHGLDN*SFPCVCHASGL
Trigger: TAGGCCCGAAGCGTGACAAACACACGGAAATGACAAGTTGTCTAATCCGTGAAGACAACATGAAGTCATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGAGGACAAAAACCAGCTaGGAGTCATCTGAATCTATA +
Preference number: 4 (lower is better)
Translates to: IMCHSLLYSLPELKATGQRTKTS*ESSESI
Trigger: TATAGATTCAGATGACTCTCAGCTGGTTTTTGTCCT...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAAACAAGCCATGGAACTaGGCCTCTGTTTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPNKPWN*ASVLKF
Trigger: GAACTTCAAAACAGAGGCTCAGTTCCATGGCTTGTT...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGCCTTATCCACGATTTTaGATCTATGTAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLEPYPRF*IYVRVK
Trigger: CTTCACTCTTACATAGATTCAAAATCGTGGATAAGG...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGTCATGGCCACGAAACTaGGCTTGGGTGCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPESWPRN*AWVQCS
Trigger: AGAACACTGCACCCAAGCCCAGTTTCGTGGCCATGA...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCACTGTCCACTTCGTCCTaGGTAAAATTCATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPLSTSS*VKFMPR
Trigger: TCTAGGCATGAATTTTACCCAGGACGAAGTGGACAG...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTTCACTTGAGGTCTCCTaGTTTCAAACACTGTATCAG +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSSLEVS*FQTLYQ
Trigger: CTGATACAGTGTTTGAAACCAGGAGACCTCAAGTGA...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTTTGTTCACCACAATTTaGGGGACACTGTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSLFTTI*GTLLST
Trigger: TGTTGACAACAGTGTCCCCCAAATTGTGGTGAACAA...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGGGAACATATCACTTGTaGCATTTGCTCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALGTYHL*HLLSLS
Trigger: TGAGAGAGAGAGCAAATGCCACAAGTGATATGTTCC...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGCTTCTATATATACAATaGCCTTGGTTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWLLYIQ*PWLPVS
Trigger: AGACACAGGCAACCAAGGCCATTGTATATATAGAAG...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTGCCGATACTTATAAATaGAGTTTCTCCCAAGTATCC +
Preference number: 4 (lower is better)
Translates to: LIQSGALSTFVTESSQFSADTYK*SFSQVS
Trigger: GGATACTTGGGAGAAACTTCATTTATAAGTATCGGC...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCACATTTTAGGCAAGTCTaGGGCAGAGTCATTTATGGA +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPHFRQV*GRVIYG
Trigger: TCCATAAATGACTCTGCCTCAGACTTGCCTAAAATG...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGTCATCTGGTTTTAGGTaGACAGTGAAGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPESSGFR*TVKASL
Trigger: GAGGGAGGCCTTCACTGTTCACCTAAAACCAGATGA...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCATCATTTTGGATGATGTaGAGAAGGTGTCGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPSFWMM*RRCRSR
Trigger: TCGACTTCGACACCTTCTTCACATCATCCAAAATGA...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAATGTAATCATTTTGGATaGTGTGAAGAAGGTGTCGAA +
Preference number: 4 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQCNHFG*CEEGVE
Trigger: TTCGACACCTTCTTCACATCATCCAAAATGATTACA...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR GCA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGACTCTCTCTTTGAATTaGATTTTAGGCAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SFYVFPSVRGDSWVELALTLSLN*ILGKSE
Trigger: CTCAGACTTGCCTAAAATGCAATTCAAAGAGAGAGT...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CCA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGACATCTGCCATGCTGTaGATTTCTTCTATATATACA +
Preference number: 4 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLTSAML*ISSIYT
Trigger: TGTATATATAGAAGAAATCCACAGCATGGCAGATGT...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGTTTCTAGCCCATTATTaGTGGTCATTCTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPEFLAHY*WSFWVS
Trigger: AGACACCCAGAATGACCATCAATAATGGGCTAGAAA...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR TCA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCGTCATCTTCCACTATaGAATGGAACATATCACTTG +
Preference number: 4 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPERHLPL*NGTYHL
Trigger: CAAGTGATATGTTCCATTTCATAGTGGAAGATGACG...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp GAGCATCGTAGCGCAGCTGCAGGCGGACGCGGTCGCGGGAAGGGCTaGGAGCACCCAGGTGCGAGTAGCGCACCTCACCCGGGCCATAGT +
Preference number: 5 (lower is better)
Translates to: EHRSAAAGGRGRGKG*EHPGASSAPHPGHS
Trigger: ACTATGGCCCGGGTGAGGTGCGCTACTCGCACCTGGGTGCTCGCAGCCCTTCCCGCGACCGCGTCCGCCTGCAGCTGCGCTACGATGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GCGAGTAGCGCACCTCACCCGGGCCATAGTCGCACGCAAAACGCTTaGGACTCAAGTGGCCCGGCCGCTGGGCCAGCGCGTCGTTGTCTA +
Preference number: 5 (lower is better)
Translates to: ASSAPHPGHSRTQNA*DSSGPAAGPARRCL
Trigger: TAGACAACGACGCGCTGGCCCAGCGGCCGGGCCACTTGAGTCCCAAGCGTTTTGCGTGCGACTATGGCCCGGGTGAGGTGCGCTACTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TGTTCGCGTTTTAGAGCCGGGCTGCCCTCTGGAGCCCCTCGCGAATaGAGCTCGACCACCATAGGCAGCCAGTCCCTGTTAGGCGAGCGG +
Preference number: 5 (lower is better)
Translates to: CSRFRAGLPSGAPRE*SSTTIGSQSLLGER
Trigger: CCGCTCGCCTAACAGGGACTGGCTGCCTATGGTGGTCGAGCTGCATTCGCGAGGGGCTCCAGAGGGCAGCCCGGCTCTAAAACGCGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp GTTCTCAGCACCGATCTCCCCTGCGAGGGAGGGCGTGCTCCTGACTaGTCTCTTCTTCCAGCTCTTGGTGGTTGCCTGCGGTGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: VLSTDLPCEGGRAPD*SLLPALGGCLRWSG
Trigger: CCCGGACCACCGCAGGCAACCACCAAGAGCTGGAAGAAGAGAGCAGTCAGGAGCACGCCCTCCCTCGCAGGGGAGATCGGTGCTGAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CCAGGAGCCACATTCCCAGCTCGATCCTCTACTTGGAACTGGAACTaGGCCACTCGGGCTGCGACTCCTAGCTCCTGCCCTGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PGATFPARSSTWNWN*ATRAATPSSCPGGL
Trigger: CAGGCCCCCAGGGCAGGAGCTAGGAGTCGCAGCCCGAGTGGCTCAGTTCCAGTTCCAAGTAGAGGATCGAGCTGGGAATGTGGCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp CTCTGTAGGGACTCCCGAAGTCCCGGAGAGACCCAGGGACTGAAGTaGTGCACCGGGGCCAGCAGCCTGTGTGGAGACGTAGCTTACCAG +
Preference number: 5 (lower is better)
Translates to: LCRDSRSPGETQGLK*CTGASSLCGDVAYQ
Trigger: CTGGTAAGCTACGTCTCCACACAGGCTGCTGGCCCCGGTGCAGCACTTCAGTCCCTGGGTCTCTCCGGGACTTCGGGAGTCCCTACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp ATCCAGCCAGACTTCGCGACCGAAGGGCACACGGAGCCCGCGGTTTaGCACCACTATAGCTTCCTCTGTAGGGACTCCCGAAGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: IQPDFATEGHTEPAV*HHYSFLCRDSRSPG
Trigger: TCCGGGACTTCGGGAGTCCCTACAGAGGAAGCTATAGTGGTGGCAAACCGCGGGCTCCGTGTGCCCTTCGGTCGCGAAGTCTGGCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACCTGGGGGACATGCCTTaGGCGGAGAAGCAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDLGDMP*AEKQVP
Trigger: GGGCACCTGCTTCTCCGCCAAAGGCATGTCCCCCAG...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TCGTTGTCTAACACGGTCACTGTGCAGCGGTCTCCTGGCTGCACCTaGAGCACCAAGTCACGCAACGGATCCAGCCAGACTTCGCGACCG +
Preference number: 5 (lower is better)
Translates to: SLSNTVTVQRSPGCT*STKSRNGSSQTSRP
Trigger: CGGTCGCGAAGTCTGGCTGGATCCGTTGCGTGACTTGGTGCTGCAGGTGCAGCCAGGAGACCGCTGCACAGTGACCGTGTTAGACAACGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp AGCGCGTCGTTGTCTAACACGGTCACTGTGCAGCGGTCTCCTGGCTaGACCTGCAGCACCAAGTCACGCAACGGATCCAGCCAGACTTCG +
Preference number: 5 (lower is better)
Translates to: SASLSNTVTVQRSPG*TCSTKSRNGSSQTS
Trigger: CGAAGTCTGGCTGGATCCGTTGCGTGACTTGGTGCTGCAGGTGCAGCCAGGAGACCGCTGCACAGTGACCGTGTTAGACAACGACGCGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGTCACTGACCACCAGGTaGTGGATGGTGACCACTGGC +
Preference number: 5 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLSLTTR*WMVTTG
Trigger: GCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGA...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGAGGCCTTCATTCCCATaGGTGTTCACTGCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLRPSFP*VFTARA
Trigger: GGCCCGAGCAGTGAACACCAATGGGAATGAAGGCCT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACTCCAGCTCTTGGTGGTaGCCTGCGGTGGTCCGGGAT +
Preference number: 5 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDSSSWW*PAVVRD
Trigger: ATCCCGGACCACCGCAGGCAACCACCAAGAGCTGGA...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp TGGGTAGTGAAGGAGTTCTCCGTAACGAGGCAAAGCGCTCAGACCTaGCAAGATGCCCACGCGGCACTCCTCGGTCTCAGGCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: WVVKEFSVTRQSAQT*QDAHAALLGLRLVG
Trigger: GCCTACCAGCCTGAGACCGAGGAGTGCCGCGTGGGCATCTTGTCAGGTCTGAGCGCTTTGCCTCGTTACGGAGAACTCCTTCACTACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp GCGGCTGGGGGCTGTGTGGCGGTAGCGGACTCCCAGCTCCTGGAATaGTTTGCAGTCCATCAAAAGGGTCTTAGAGGTCCCTCTATCTCC +
Preference number: 5 (lower is better)
Translates to: AAGGCVAVADSQLLE*FAVHQKGLRGPSIS
Trigger: GGAGATAGAGGGACCTCTAAGACCCTTTTGATGGACTGCAAAGCATTCCAGGAGCTGGGAGTCCGCTACCGCCACACAGCCCCCAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp AATGACCCTTGCTTCTGCCACAGACCCTGCTCTTCCTGGGGGACATaGCTTTGGCGGAGAAGCAGGTGCCCCAAGCTTGAGAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: NDPCFCHRPCSSWGT*LWRRSRCPKLEKGG
Trigger: GCCACCCTTCTCAAGCTTGGGGCACCTGCTTCTCCGCCAAAGGCATGTCCCCCAGGAAGAGCAGGGTCTGTGGCAGAAGCAAGGGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TTGGGTGCAGTGTTCTCCGCTCCTCCTCGAATCCTCACAAGCACCTaGAAGTGTTCGCGTTTTAGAGCCGGGCTGCCCTCTGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: LGAVFSAPPRILTST*KCSRFRAGLPSGAP
Trigger: AGGGGCTCCAGAGGGCAGCCCGGCTCTAAAACGCGAACACTTCCAGGTGCTTGTGAGGATTCGAGGAGGAGCGGAGAACACTGCACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GGCGGCTGGTCATCCACAGGCACTAAAGTGATAGGGAACAGGAACTaGACCTGGTGCCTGCCTCCTCCATCGGACATGCGCAGCACCAAG +
Preference number: 5 (lower is better)
Translates to: GGWSSTGTKVIGNRN*TWCLPPPSDMRSTK
Trigger: CTTGGTGCTGCGCATGTCCGATGGAGGAGGCAGGCACCAGGTCCAGTTCCTGTTCCCTATCACTTTAGTGCCTGTGGATGACCAGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CCCTCAGCCACTGTCAGCCCAGTGTTGGCGTTCAGGACCGGCGGCTaGTCATCCACAGGCACTAAAGTGATAGGGAACAGGAACTGGACC +
Preference number: 5 (lower is better)
Translates to: PSATVSPVLAFRTGG*SSTGTKVIGNRNWT
Trigger: GGTCCAGTTCCTGTTCCCTATCACTTTAGTGCCTGTGGATGACCAGCCGCCGGTCCTGAACGCCAACACTGGGCTGACAGTGGCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AGGACCTTCACGGTCCCCTGGCCGAACGTTCACTCTGAGAGTGATTaGCACCACATGGTGTCTGTCGCTGACCTCCAGGGAGCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: RTFTVPWPNVHSESD*HHMVSVADLQGAAV
Trigger: GACAGCTGCTCCCTGGAGGTCAGCGACAGACACCATGTGGTGCCAATCACTCTCAGAGTGAACGTTCGGCCAGGGGACCGTGAAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CTATTGAGCTCCCAGGGCAGGATGCCGTCAGGAGGAATTCTTCCGTaGGGGACCTGCCTCTTGCCACGGCGGTTCAGGGAGATATGTTGG +
Preference number: 5 (lower is better)
Translates to: LLSSQGRMPSGGILP*GTCLLPRRFREICW
Trigger: CCAACATATCTCCCTGAACCGCCGTGGCAAGAGGCAGGTCCCCCACGGAAGAATTCCTCCTGACGGCATCCTGCCCTGGGAGCTCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCGCAGGTGCCCCAAGCTaGAGAAGGGTGGCAACAGGA +
Preference number: 5 (lower is better)
Translates to: DRLALTGTHYSLIDRLALAGAPS*RRVATG
Trigger: TCCTGTTGCCACCCTTCTCAAGCTTGGGGCACCTGC...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp GTTCCACAAGATGGCAGTGTCGTACACGAATGTGAGTCGGAGCTCTaGCTTCAAGTCGAAATGCTGCCAGCCGCCCACGCCCACGGGGGA +
Preference number: 5 (lower is better)
Translates to: VPQDGSVVHECESEL*LQVEMLPAAHAHGG
Trigger: TCCCCCGTGGGCGTGGGCGGCTGGCAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACATTCGTGTACGACACTGCCATCTTGTGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp GAAGGAGTTCTCCGTAACGAGGCAAAGCGCTCAGACCTGACAAGATaGCCACGCGGCACTCCTCGGTCTCAGGCTGGTAGGCGAACTCTA +
Preference number: 5 (lower is better)
Translates to: EGVLRNEAKRSDLTR*PRGTPRSQAGRRTL
Trigger: TAGAGTTCGCCTACCAGCCTGAGACCGAGGAGTGCCGCGTGGGCATCTTGTCAGGTCTGAGCGCTTTGCCTCGTTACGGAGAACTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp GCAGGATGCCGTCAGGAGGAATTCTTCCGTGGGGGACCTGCCTCTTaGCACGGCGGTTCAGGGAGATATGTTGGATGTTTGTTCCCCGGT +
Preference number: 5 (lower is better)
Translates to: AGCRQEEFFRGGPAS*HGGSGRYVGCLFPG
Trigger: ACCGGGGAACAAACATCCAACATATCTCCCTGAACCGCCGTGGCAAGAGGCAGGTCCCCCACGGAAGAATTCCTCCTGACGGCATCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AAGGGTCTTAGAGGTCCCTCTATCTCCGGCCCCTCCCTGGACCTGTaGGTAGTGAAGGAGTTCTCCGTAACGAGGCAAAGCGCTCAGACC +
Preference number: 5 (lower is better)
Translates to: KGLRGPSISGPSLDL*VVKEFSVTRQSAQT
Trigger: GGTCTGAGCGCTTTGCCTCGTTACGGAGAACTCCTTCACTACCCACAGGTCCAGGGAGGGGCCGGAGATAGAGGGACCTCTAAGACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CCCAGTGGAGCCGGCGAGTGGTTCTCATCTGTGTCCGTGGGAGGCTaGGTCACTGTGTACTGTAACTCTCGGTCATCTGTGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PSGAGEWFSSVSVGG*VTVYCNSRSSVSRS
Trigger: TGACCTGGACACAGATGACCGAGAGTTACAGTACACAGTGACCCAGCCTCCCACGGACACAGATGAGAACCACTCGCCGGCTCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CCAACGTGCCCAGTGGAGCCGGCGAGTGGTTCTCATCTGTGTCCGTaGGAGGCTGGGTCACTGTGTACTGTAACTCTCGGTCATCTGTGT +
Preference number: 5 (lower is better)
Translates to: PTCPVEPASGSHLCP*EAGSLCTVTLGHLC
Trigger: ACACAGATGACCGAGAGTTACAGTACACAGTGACCCAGCCTCCCACGGACACAGATGAGAACCACTCGCCGGCTCCACTGGGCACGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTGGCTCTGCGGGGACATCATGGGCTCAGTGCTTCCAGAGCCCTTTaGAGTATCCTTGCCCTTAGTGCTCCTGTTCCTGCACATGACGGC +
Preference number: 5 (lower is better)
Translates to: VALRGHHGLSASRAL*SILALSAPVPAHDG
Trigger: GCCGTCATGTGCAGGAACAGGAGCACTAAGGGCAAGGATACTCCAAAGGGCTCTGGAAGCACTGAGCCCATGATGTCCCCGCAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGCCACTGTGAAGGTCTaGGGAGCAGAGTCGCTACTG +
Preference number: 5 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDATVKV*GAESLL
Trigger: CAGTAGCGACTCTGCTCCCAAGACCTTCACAGTGGC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TCCCAGGGCAGGATGCCGTCAGGAGGAATTCTTCCGTGGGGGACCTaGCTCTTGCCACGGCGGTTCAGGGAGATATGTTGGATGTTTGTT +
Preference number: 5 (lower is better)
Translates to: SQGRMPSGGILPWGT*LLPRRFREICWMFV
Trigger: AACAAACATCCAACATATCTCCCTGAACCGCCGTGGCAAGAGGCAGGTCCCCCACGGAAGAATTCCTCCTGACGGCATCCTGCCCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GAGGGATTATCAGTGAAGACCAACGTGCCCAGTGGAGCCGGCGAGTaGTTCTCATCTGTGTCCGTGGGAGGCTGGGTCACTGTGTACTGT +
Preference number: 5 (lower is better)
Translates to: EGLSVKTNVPSGAGE*FSSVSVGGWVTVYC
Trigger: ACAGTACACAGTGACCCAGCCTCCCACGGACACAGATGAGAACCACTCGCCGGCTCCACTGGGCACGTTGGTCTTCACTGATAATCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AGATGTAGTCAGAGTAAGAGAGCACGGACGTCCGCACAGTGCTGGTaGCTGTCCCTTGCTGTGTGTAGCAGATCACCATCAGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: RCSQSKRARTSAQCW*LSLAVCSRSPSAPG
Trigger: GCCGGGAGCTGATGGTGATCTGCTACACACAGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCGTGCTCTCTTACTCTGACTACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTTCGTCTTTGTCAAAGCGGATCACGCTGCTGTGGTCCTCGGGCCTaGAGATGTAGTCAGAGTAAGAGAGCACGGACGTCCGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: VRLCQSGSRCCGPRA*RCSQSKRARTSAQC
Trigger: GCACTGTGCGGACGTCCGTGCTCTCTTACTCTGACTACATCTCCAGGCCCGAGGACCACAGCAGCGTGATCCGCTTTGACAAAGACGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCTGGCCGTCCAGATATTaGCATGTGGCCGTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: DRLALTGTHYSLIDRLALWPSRY*HVAVFG
Trigger: CCCAAACACGGCCACATGCAAATATCTGGACGGCCA...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACTCCAAAGCTGGTGGCTaGTGTCTCTGGCTGAGCCTT +
Preference number: 5 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDSKAGG*CLWLSL
Trigger: AAGGCTCAGCCAGAGACACAAGCCACCAGCTTTGGA...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CGCAGCACCAAGTTGTCACTCAGTGAACCGTCTTTGTCATCATGCTaGTACACAACCTGGCCAGCCGCCAGCTCCGCCACTGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RSTKLSLSEPSLSSC*YTTWPAASSATVKV
Trigger: GACCTTCACAGTGGCGGAGCTGGCGGCTGGCCAGGTTGTGTATCAGCATGATGACAAAGACGGTTCACTGAGTGACAACTTGGTGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CCTGCCTCCTCCATCGGACATGCGCAGCACCAAGTTGTCACTCAGTaGACCGTCTTTGTCATCATGCTGATACACAACCTGGCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PASSIGHAQHQVVTQ*TVFVIMLIHNLASR
Trigger: GCGGCTGGCCAGGTTGTGTATCAGCATGATGACAAAGACGGTTCACTGAGTGACAACTTGGTGCTGCGCATGTCCGATGGAGGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TGGGTCGATGATCTCCACTGTAGTCACTGTGGGGAACTCCAGGATTaGCAGCACAGGCTCCGAGAGAACCACTTGGAAGGTCTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: WVDDLHCSHCGELQD*QHRLRENHLEGLRV
Trigger: CACTCGGAGACCTTCCAAGTGGTTCTCTCGGAGCCTGTGCTGGCAATCCTGGAGTTCCCCACAGTGACTACAGTGGAGATCATCGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp GCCTGGAGATGTAGTCAGAGTAAGAGAGCACGGACGTCCGCACAGTaGTGGTGGCTGTCCCTTGCTGTGTGTAGCAGATCACCATCAGCT +
Preference number: 5 (lower is better)
Translates to: AWRCSQSKRARTSAQ*WWLSLAVCSRSPSA
Trigger: AGCTGATGGTGATCTGCTACACACAGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCGTGCTCTCTTACTCTGACTACATCTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp ATGTTGGATGTTTGTTCCCCGGTTGTTCTCAGCACCGATCTCCCCTaGGAGGGAGGGCGTGCTCCTGACTGCTCTCTTCTTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: MLDVCSPVVLSTDLP*EGGRAPDCSLLPAL
Trigger: AAGAGCTGGAAGAAGAGAGCAGTCAGGAGCACGCCCTCCCTCGCAGGGGAGATCGGTGCTGAGAACAACCGGGGAACAAACATCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GGATTCCTGTACCACCATCCGAAGGGGACAGCCACTGCCCAGTTCTaGAGGGAGACGGTCCACGGGATGAATGCGTATTACAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: GFLYHHPKGTATAQF*RETVHGMNAYYKPL
Trigger: CAGAGGTTTGTAATACGCATTCATCCCGTGGACCGTCTCCCTCCAGAACTGGGCAGTGGCTGTCCCCTTCGGATGGTGGTACAGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTCATCTGTGTCCAGGTCAGTGTAGTGCAGCCACCTTTTCCTCAGTaGTGTGAGCTGGGATTCCTGTACCACCATCCGAAGGGGACAGCC +
Preference number: 5 (lower is better)
Translates to: VICVQVSVVQPPFPQ*CELGFLYHHPKGTA
Trigger: GGCTGTCCCCTTCGGATGGTGGTACAGGAATCCCAGCTCACACCACTGAGGAAAAGGTGGCTGCACTACACTGACCTGGACACAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTGTCAACATCACTCACATGCAGCTCGGTCTCACGCAGGATGTGGTaGCCCTTCTCCTCAACGGTGAAGCCAGTGTTGACAATCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VSTSLTCSSVSRRMW*PFSSTVKPVLTISG
Trigger: CCCCGAGATTGTCAACACTGGCTTCACCGTTGAGGAGAAGGGCCACCACATCCTGCGTGAGACCGAGCTGCATGTGAGTGATGTTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TGGAGATGTAGTCAGAGTAAGAGAGCACGGACGTCCGCACAGTGCTaGTGGCTGTCCCTTGCTGTGTGTAGCAGATCACCATCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: WRCSQSKRARTSAQC*WLSLAVCSRSPSAP
Trigger: GGGAGCTGATGGTGATCTGCTACACACAGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCGTGCTCTCTTACTCTGACTACATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GGCAGGCTCATCATCCCTGTCTGTGAGGATGGTCACATTGGCTCCTaGAAACTTGTCACCGATCCTCCCGCCCATGGGCATGCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: GRLIIPVCEDGHIGS*KLVTDPPAHGHAQK
Trigger: CTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCAATGTGACCATCCTCACAGACAGGGATGATGAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CTCTCTGGGGTTGCAGGTGACTGGCAGACGGTACTCCTGGTTGGATaGAGTGGTGCAGGGTACCAACTTTACTGTGTAGGTGCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: LSGVAGDWQTVLLVG*SGAGYQLYCVGARV
Trigger: TACTCGGGCACCTACACAGTAAAGTTGGTACCCTGCACCACTCCATCCAACCAGGAGTACCGTCTGCCAGTCACCTGCAACCCCAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGTGCTCGGGCCGCACATaGGACCCGGGAGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SFYVFPSVRGDSWVELALCSGRT*DPGARL
Trigger: CAGCCTGGCTCCCGGGTCCAATGTGCGGCCCGAGCA...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp GCAGGTTGGAGCATTTGTGATTCCCAACTCTCGTGCCGTCAGGGCTaGGGGTCAGCTCAAAGTTGGACAGCTCTCTTGTGGAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: AGWSICDSQLSCRQG*GSAQSWTALLWRWQ
Trigger: CTGCCATCTCCACAAGAGAGCTGTCCAACTTTGAGCTGACCCTCAGCCCTGACGGCACGAGAGTTGGGAATCACAAATGCTCCAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp TGCCGATCCCATGGTTCCACAAGATGGCAGTGTCGTACACGAATGTaGGTCGGAGCTCTGACTTCAAGTCGAAATGCTGCCAGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: CRSHGSTRWQCRTRM*VGALTSSRNAASRP
Trigger: TGGGCGGCTGGCAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACATTCGTGTACGACACTGCCATCTTGTGGAACCATGGGATCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TCATCCACAGGCACTAAAGTGATAGGGAACAGGAACTGGACCTGGTaGCTGCCTCCTCCATCGGACATGCGCAGCACCAAGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SSTGTKVIGNRNWTW*LPPPSDMRSTKLSL
Trigger: GAGTGACAACTTGGTGCTGCGCATGTCCGATGGAGGAGGCAGGCACCAGGTCCAGTTCCTGTTCCCTATCACTTTAGTGCCTGTGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp AGAGTGAACGAGATGTGGGTCACATCCGTGTCAACATCACTCACATaGAGCTCGGTCTCACGCAGGATGTGGTGGCCCTTCTCCTCAACG +
Preference number: 5 (lower is better)
Translates to: RVNEMWVTSVSTSLT*SSVSRRMWWPFSST
Trigger: CGTTGAGGAGAAGGGCCACCACATCCTGCGTGAGACCGAGCTGCATGTGAGTGATGTTGACACGGATGTGACCCACATCTCGTTCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp CCGCATTCGCTGGGCTGTACTTGGGCACGTAGCCGTCATCCCCCGTaGATAAGAACACCTTCTCAATGCTGCAGTAAAAGGAGTCACCGA +
Preference number: 5 (lower is better)
Translates to: PHSLGCTWARSRHPP*IRTPSQCCSKRSHR
Trigger: TCGGTGACTCCTTTTACTGCAGCATTGAGAAGGTGTTCTTATGCACGGGGGATGACGGCTACGTGCCCAAGTACAGCCCAGCGAATGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TGCATGTGGCCGTGTTTGGGGGCCTGTGTGAGAGTGAACGAGATGTaGGTCACATCCGTGTCAACATCACTCACATGCAGCTCGGTCTCA +
Preference number: 5 (lower is better)
Translates to: CMWPCLGACVRVNEM*VTSVSTSLTCSSVS
Trigger: TGAGACCGAGCTGCATGTGAGTGATGTTGACACGGATGTGACCCACATCTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TGGAATTGTCCGCCTACATGCAGTGGCCGTCCAGATATTTGCATGTaGCCGTGTTTGGGGGCCTGTGTGAGAGTGAACGAGATGTGGGTC +
Preference number: 5 (lower is better)
Translates to: WNCPPTCSGRPDICM*PCLGACVRVNEMWV
Trigger: GACCCACATCTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CTCCATCTCACCAGGGAGGAATGTGACAGTGGAAACATCGGTATTTaGGCGTTCCTCGAAGTCCATCATCACCTGCGCAGACCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LHLTREECDSGNIGI*AFLEVHHHLRRPLP
Trigger: AGGCAGGGGTCTGCGCAGGTGATGATGGACTTCGAGGAACGCCCAAATACCGATGTTTCCACTGTCACATTCCTCCCTGGTGAGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TGGGTGTTCAGGCTGAACTCAGTCGCCACGGGATCGCTGACCTGTTaGAATCGAATGTCAAGGTCAAAGGTGACAGGCTCTCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: WVFRLNSVATGSLTC*NRMSRSKVTGSLGL
Trigger: CAACCCCAGAGAGCCTGTCACCTTTGACCTTGACATTCGATTCCAACAGGTCAGCGATCCCGTGGCGACTGAGTTCAGCCTGAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GAGAATCAGCCAGGCAGCCATATTCCGCATTCGCTGGGCTGTACTTaGGCACGTAGCCGTCATCCCCCGTGCATAAGAACACCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: ENQPGSHIPHSLGCT*ARSRHPPCIRTPSQ
Trigger: TTGAGAAGGTGTTCTTATGCACGGGGGATGACGGCTACGTGCCCAAGTACAGCCCAGCGAATGCGGAATATGGCTGCCTGGCTGATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCCGTGAGCGGCCGATATaGACCCTCATAGAGAATAAG +
Preference number: 5 (lower is better)
Translates to: DRLALTGTHYSLIDRLALRERPI*TLIENK
Trigger: CTTATTCTCTATGAGGGTCAATATCGGCCGCTCACG...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGTGACCACTGGCTTTTaGTTGTCTACGTCACTGATT +
Preference number: 5 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLVTTGF*LSTSLI
Trigger: AATCAGTGACGTAGACAACAAAAAGCCAGTGGTCAC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGATGGACACGGTGGCCTaGCTGGGCTCCCCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWMDTVA*LGSPRA
Trigger: TGCCCTTGGGGAGCCCAGCAAGGCCACCGTGTCCAT...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGTGGGTAAAGAGAGCCTaGCAGCTCAGCTTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMWVKRA*QLSFRG
Trigger: CCCCCGGAAGCTGAGCTGCAAGGCTCTCTTTACCCA...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp TGTTATATCCTGTTGCCGCCACTCTGTCACCGTTCGCTCGTAAAATaGCCCTTGCTTCTGCCACAGACCCTGCTCTTCCTGGGGGACATG +
Preference number: 5 (lower is better)
Translates to: CYILLPPLCHRSLVK*PLLLPQTLLFLGDM
Trigger: CATGTCCCCCAGGAAGAGCAGGGTCTGTGGCAGAAGCAAGGGTCATTTTACGAGCGAACGGTGACAGAGTGGCGGCAACAGGATATAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TCCAAGTGGAATTGTCCGCCTACATGCAGTGGCCGTCCAGATATTTaGATGTGGCCGTGTTTGGGGGCCTGTGTGAGAGTGAACGAGATG +
Preference number: 5 (lower is better)
Translates to: SKWNCPPTCSGRPDI*MWPCLGACVRVNEM
Trigger: CATCTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp CCTGGTTGGATGGAGTGGTGCAGGGTACCAACTTTACTGTGTAGGTaGCCGAGTAGTCACGGACCGCAAAGTCTGACACGAAACTCCACT +
Preference number: 5 (lower is better)
Translates to: PGWMEWCRVPTLLCR*PSSHGPQSLTRNST
Trigger: AGTGGAGTTTCGTGTCAGACTTTGCGGTCCGTGACTACTCGGGCACCTACACAGTAAAGTTGGTACCCTGCACCACTCCATCCAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TGGGCACGTAGCCGTCATCCCCCGTGCATAAGAACACCTTCTCAATaGTGCAGTAAAAGGAGTCACCGAGGTTCTGGACAGGATCGACCA +
Preference number: 5 (lower is better)
Translates to: WARSRHPPCIRTPSQ*CSKRSHRGSGQDRP
Trigger: TGGTCGATCCTGTCCAGAACCTCGGTGACTCCTTTTACTGCAGCATTGAGAAGGTGTTCTTATGCACGGGGGATGACGGCTACGTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GCCATGCTTTATGTCCTCCAAGTGGAATTGTCCGCCTACATGCAGTaGCCGTCCAGATATTTGCATGTGGCCGTGTTTGGGGGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: AMLYVLQVELSAYMQ*PSRYLHVAVFGGLC
Trigger: ACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAGGACATAAAGCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TGGTCACATTGGCTCCTGGAAACTTGTCACCGATCCTCCCGCCCATaGGCATGCTCAAAAGGACCTGGAAAGTCTCCTCCTCTTCGTACA +
Preference number: 5 (lower is better)
Translates to: WSHWLLETCHRSSRP*ACSKGPGKSPPLRT
Trigger: TGTACGAAGAGGAGGAGACTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCAATGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTTGGTTCACTCCGTATAAGGCGGAGGGAAAATGTGAGGCCCGGATaGTCAGCTGACACGATCAGTGAGCTGGTAAAGGAAGCAGGATGG +
Preference number: 5 (lower is better)
Translates to: VGSLRIRRRENVRPG*SADTISELVKEAGW
Trigger: CCATCCTGCTTCCTTTACCAGCTCACTGATCGTGTCAGCTGACCATCCGGGCCTCACATTTTCCCTCCGCCTTATACGGAGTGAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATTTCTAGCCCATTATaGATGGTCATTCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLISSPL*MVILGV
Trigger: GACACCCAGAATGACCATCAATAATGGGCTAGAAAT...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGATAGACGTTGTCAGAGTGACTTaGCCACCTTCTTTCAAGGAC +
Preference number: 5 (lower is better)
Translates to: HPLPTDRQAGTHRHPLIDVVRVT*PPSFKD
Trigger: GTCCTTGAAAGAAGGTGGCAAAGTCACTCTGACAAC...GTCTATCAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGGGGTTCTTTGTGGCGTaGGTCAGGAAGCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMGFFVA*VRKPWW
Trigger: CCACCATGGCTTCCTGACCAACGCCACAAAGAACCC...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCTCATCCACTGCCAGTTaGGCGTTAAACAGGACATCT +
Preference number: 5 (lower is better)
Translates to: DRLALTGTHYSLIDRLALSSTAS*ALNRTS
Trigger: AGATGTCCTGTTTAACGCCAAACTGGCAGTGGATGA...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp TCAGCTCGAGGACACACGGCTTCTCCATCTCACCAGGGAGGAATGTaGCAGTGGAAACATCGGTATTTGGGCGTTCCTCGAAGTCCATCA +
Preference number: 5 (lower is better)
Translates to: SARGHTASPSHQGGM*QWKHRYLGVPRSPS
Trigger: TGATGGACTTCGAGGAACGCCCAAATACCGATGTTTCCACTGTCACATTCCTCCCTGGTGAGATGGAGAAGCCGTGTGTCCTCGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CTGGTAAAGGAAGCAGGATGGGACAGCACAAACAAGCCATGGAACTaGGCCTCTGTTTTGAAGTTCACAGCCAGGCGTCCCTCCTCACCA +
Preference number: 5 (lower is better)
Translates to: LVKEAGWDSTNKPWN*ASVLKFTARRPSSP
Trigger: TGGTGAGGAGGGACGCCTGGCTGTGAACTTCAAAACAGAGGCTCAGTTCCATGGCTTGTTTGTGCTGTCCCATCCTGCTTCCTTTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp ATTCTGCCATGCTTTATGTCCTCCAAGTGGAATTGTCCGCCTACATaGAGTGGCCGTCCAGATATTTGCATGTGGCCGTGTTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: ILPCFMSSKWNCPPT*SGRPDICMWPCLGA
Trigger: GGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAGGACATAAAGCATGGCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp CATTGGCTCCTGGAAACTTGTCACCGATCCTCCCGCCCATGGGCATaGTCAAAAGGACCTGGAAAGTCTCCTCCTCTTCGTACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: HWLLETCHRSSRPWA*SKGPGKSPPLRTKS
Trigger: ACTCTTTGTACGAAGAGGAGGAGACTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CAGGCTGGTAGGCGAACTCTAAGCTCCGATCGTCCAAGGCATTACTaGTCCCTAGCAGTTCTTCCACGACCAGAGGTAAATTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: QAGRRTLSSDRPRHY*SLAVLPRPEVNSES
Trigger: TGACTCGGAATTTACCTCTGGTCGTGGAAGAACTGCTAGGGACCAGTAATGCCTTGGACGATCGGAGCTTAGAGTTCGCCTACCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AGACAACCGGGTAGCCAGACACAGGTCCAGTGTCCTCTCTGCCTTTaGAGGGATCATCGTATATCAGCAAGGACACAATGTGAGGGACAG +
Preference number: 5 (lower is better)
Translates to: RQPGSQTQVQCPLCL*RDHRISARTQCEGQ
Trigger: CTGTCCCTCACATTGTGTCCTTGCTGATATACGATGATCCCTCCAAAGGCAGAGAGGACACTGGACCTGTGTCTGGCTACCCGGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TATGTGCGGCATAGTGACAGTGAGTTTGATGAGGTTGGCAAAGTCTaGGTCCTCTGGGCCAGTGTAGCGCAACTTAGCGGAGAATGGCTC +
Preference number: 5 (lower is better)
Translates to: YVRHSDSEFDEVGKV*VLWASVAQLSGEWL
Trigger: GAGCCATTCTCCGCTAAGTTGCGCTACACTGGCCCAGAGGACCCAGACTTTGCCAACCTCATCAAACTCACTGTCACTATGCCGCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GACCGGCACACTGTACTGGTAAGGATAGGTCTCTCCAATGACCTCTaGGTTCTTTGTGGCGTTGGTCAGGAAGCCATGGTGGGTCTTTAC +
Preference number: 5 (lower is better)
Translates to: DRHTVLVRIGLSNDL*VLCGVGQEAMVGLY
Trigger: GTAAAGACCCACCATGGCTTCCTGACCAACGCCACAAAGAACCCAGAGGTCATTGGAGAGACCTATCCTTACCAGTACAGTGTGCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTTGGAAGCTGGAGAACTaGGCTGTCCTGCGCGCACGG +
Preference number: 5 (lower is better)
Translates to: LIQSGALSTFVTESSQFSWKLEN*AVLRAR
Trigger: CCGTGCGCGCAGGACAGCCAAGTTCTCCAGCTTCCA...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGGCCACGAAACTGGGCTaGGGTGCAGTGTTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: IMCHSLLYSLPELKATGQATKLG*GAVFSA
Trigger: AGCGGAGAACACTGCACCCAAGCCCAGTTTCGTGGC...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp GTTGTGGATGGTGACCACTGGCTTTTTGTTGTCTACGTCACTGATTaGGATCCGGAAAGTTCGGAAGACAGGGTTCCGCCCATCGGTGAC +
Preference number: 5 (lower is better)
Translates to: VVDGDHWLFVVYVTD*DPESSEDRVPPIGD
Trigger: GTCACCGATGGGCGGAACCCTGTCTTCCGAACTTTCCGGATCTCAATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CAACTTTACTGTGTAGGTGCCCGAGTAGTCACGGACCGCAAAGTCTaGCACGAAACTCCACTGCTGGACTGGCTGATTGTAGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: QLYCVGARVVTDRKV*HETPLLDWLIVGWF
Trigger: GAACCAACCTACAATCAGCCAGTCCAGCAGTGGAGTTTCGTGTCAGACTTTGCGGTCCGTGACTACTCGGGCACCTACACAGTAAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GACCCATCAGACAACCAGAGATTCTTCTTAGACAGCAGATACATGTaGGTGTTCAGGCTGAACTCAGTCGCCACGGGATCGCTGACCTGT +
Preference number: 5 (lower is better)
Translates to: DPSDNQRFFLDSRYM*VFRLNSVATGSLTC
Trigger: ACAGGTCAGCGATCCCGTGGCGACTGAGTTCAGCCTGAACACCCACATGTATCTGCTGTCTAAGAAGAATCTCTGGTTGTCTGATGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAATGGCAACCCCGGCTCTaGATTTCTCTGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQWQPRL*ISLSLV
Trigger: CACCAGGCTCAGAGAAATCAAGAGCCGGGGTTGCCA...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CACAGGCACCCACTCCCCACTGATAGACAGGCTGGCACTCACAGGCACCCACTGGTTGCCATTAGGACTTaGTTGTTGATAACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: HRHPLPTDRQAGTHRHPLVAIRT*LLITLV
Trigger: AACCAAAGTTATCAACAACAAAGTCCTAATGGCAAC...CAGTGGGTGCCTGTGAGTGCCAGCCTGTCTATCAGTGGGGAGTGGGTGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGGGCTGTTCAAGTCACTaGTGCTCAGCAGATCCGTTG +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMGCSSH*CSADPL
Trigger: CAACGGATCTGCTGAGCACAAGTGACTTGAACAGCC...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCCTGGATTTTCATCACTaGAGGTCTCCTGGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: DRLALTGTHYSLIDRLALLDFHH*RSPGFK
Trigger: TTTGAAACCAGGAGACCTCAAGTGATGAAAATCCAG...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAAGACGGTACTCCTGGTaGGATGGAGTGGTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQRRYSW*DGVVQG
Trigger: ACCCTGCACCACTCCATCCAACCAGGAGTACCGTCT...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGGGGATCGCTGACCTGTaGGAATCGAATGTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMGIADL*ESNVKV
Trigger: GACCTTGACATTCGATTCCAACAGGTCAGCGATCCC...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp TACGACACATTTTCTCTCGTTCGTCTTTGTCAAAGCGGATCACGCTaGTGTGGTCCTCGGGCCTGGAGATGTAGTCAGAGTAAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: YDTFSLVRLCQSGSR*CGPRAWRCSQSKRA
Trigger: TGCTCTCTTACTCTGACTACATCTCCAGGCCCGAGGACCACAGCAGCGTGATCCGCTTTGACAAAGACGAACGAGAGAAAATGTGTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CACAAGAGGTCATCCTTCAGGGAGTCCATGTCCTCAGCACTTAGGTaGGTCAGGCTTATCACACTCTTGTCACCTTCCAGCACTACAAAC +
Preference number: 5 (lower is better)
Translates to: HKRSSFRESMSSALR*VRLITLLSPSSTTN
Trigger: GTTTGTAGTGCTGGAAGGTGACAAGAGTGTGATAAGCCTGACCCACCTAAGTGCTGAGGACATGGACTCCCTGAAGGATGACCTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGATGATTGACCTGGGCTaGGGTAAAATGGCTCACCAC +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMMIDLG*GKMAHH
Trigger: GTGGTGAGCCATTTTACCCAAGCCCAGGTCAATCAT...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAACCGCCCATCGGTGACTaGAAACTCGAAGCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQPPIGD*KLEAVH
Trigger: ATGGACAGCTTCGAGTTTCAAGTCACCGATGGGCGG...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GACAGGCTGGCACTCACAGGCACCCACTACTCACTGATAGACAGGCTGGCACTCGTTTTCATTCAAGTCTaGCTTGGTGAAAACCATGAC +
Preference number: 5 (lower is better)
Translates to: DRLALTGTHYSLIDRLALVFIQV*LGENHD
Trigger: GTCATGGTTTTCACCAAGCAAGACTTGAATGAAAAC...GAGTGCCAGCCTGTCTATCAGTGAGTAGTGGGTGCCTGTGAGTGCCAGCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGCAATTCCCTCCAGTATaGGTCGTCCAAGGTCATCCA +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMQFPPV*VVQGHP
Trigger: TGGATGACCTTGGACGACCAATACTGGAGGGAATTG...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTCTCTTCTTCCAGCTCTaGGTGGTTGCCTGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: LIQSGALSTFVTESSQFSLFFQL*VVACGG
Trigger: ACCACCGCAGGCAACCACCAAGAGCTGGAAGAAGAG...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp AGGTGCCCCAAGCTTGAGAAGGGTGGCAACAGGACAAAAACCAGCTaGGAGTCATCTGAATCTATATCGGTTGCACTGAGAGTCAAGGGT +
Preference number: 5 (lower is better)
Translates to: RCPKLEKGGNRTKTS*ESSESISVALRVKG
Trigger: ACCCTTGACTCTCAGTGCAACCGATATAGATTCAGATGACTCTCAGCTGGTTTTTGTCCTGTTGCCACCCTTCTCAAGCTTGGGGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CAGGGCTGTTCAAGTCACTTGTGCTCAGCAGATCCGTTGTCAGAGTaGCTTTGCCACCTTCTTTCAAGGACACGCCCTTACTTACCACAT +
Preference number: 5 (lower is better)
Translates to: QGCSSHLCSADPLSE*LCHLLSRTRPYLPH
Trigger: ATGTGGTAAGTAAGGGCGTGTCCTTGAAAGAAGGTGGCAAAGTCACTCTGACAACGGATCTGCTGAGCACAAGTGACTTGAACAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp TATCAGGAAAAACATAGAAGTCCGAGTGGGTGCCGTCAGTCACGGTaGAGGAGAAGCTGTCTTCCGTGGATTCTGTGCCATCGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: YQEKHRSPSGCRQSR*RRSCLPWILCHRVC
Trigger: ACAAACACGATGGCACAGAATCCACGGAAGACAGCTTCTCCTTCACCGTGACTGACGGCACCCACTCGGACTTCTATGTTTTTCCTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CACATCTTCTTCAACAGAGTACTCAGACTGGGGAATGAACACGGTTaGTTCGTCTCCTGGGTCGATGATCTCCACTGTAGTCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: HIFFNRVLRLGNEHG*FVSWVDDLHCSHCG
Trigger: CCCACAGTGACTACAGTGGAGATCATCGACCCAGGAGACGAATCAACCGTGTTCATTCCCCAGTCTGAGTACTCTGTTGAAGAAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GGAATGAACAGCTCACCCACATCTTCTTCAACAGAGTACTCAGACTaGGGAATGAACACGGTTGATTCGTCTCCTGGGTCGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: GMNSSPTSSSTEYSD*GMNTVDSSPGSMIS
Trigger: GGAGATCATCGACCCAGGAGACGAATCAACCGTGTTCATTCCCCAGTCTGAGTACTCTGTTGAAGAAGATGTGGGTGAGCTGTTCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGAAGGCAGAGGTGAGGTaGAAAATCAAAAGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMKAEVR*KIKRSG
Trigger: CCCAGACCTTTTGATTTTCAACCTCACCTCTGCCTT...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACCTCTGTTATATCCTGTaGCCGCCACTCTGTCACCGT +
Preference number: 5 (lower is better)
Translates to: SWVELALVMTSCCLHGLDLCYIL*PPLCHR
Trigger: ACGGTGACAGAGTGGCGGCAACAGGATATAACAGAG...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGAGCTCGATCCTCTACTaGGAACTGGAACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWSSILY*ELELSH
Trigger: GTGGCTCAGTTCCAGTTCCAAGTAGAGGATCGAGCT...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGCTGGAGCGGGTCAAAGTGTCGTaGATGTTCTCACTGGCACAA +
Preference number: 5 (lower is better)
Translates to: WSFPNSEVAKHGAKGLLERVKVS*MFSLAQ
Trigger: TTGTGCCAGTGAGAACATCAACGACACTTTGACCCG...CTCCAGCAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGATGTTTGTTCCCCGGTaGTTCTCAGCACCGATCTCC +
Preference number: 5 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWMFVPR*FSAPIS
Trigger: GGAGATCGGTGCTGAGAACAACCGGGGAACAAACAT...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp ATGCGTATTACAAACCTCTGGATCCCAGACTGGTTAGGGGGATCATaGTTGTCTTGGACTCTAAACATGAACTGGTCCATCACCGGCCCA +
Preference number: 5 (lower is better)
Translates to: MRITNLWIPDWLGGS*LSWTLNMNWSITGP
Trigger: TGGGCCGGTGATGGACCAGTTCATGTTTAGAGTCCAAGACAATCATGATCCCCCTAACCAGTCTGGGATCCAGAGGTTTGTAATACGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp CTGGTGCTGGAGAAATGTTCTCTACATAGCCTGAGGTTGGCTGAATaGCTATTGTGCACAAGAGGTCATCCTTCAGGGAGTCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: LVLEKCSLHSLRLAE*LLCTRGHPSGSPCP
Trigger: AGGACATGGACTCCCTGAAGGATGACCTCTTGTGCACAATAGTCATTCAGCCAACCTCAGGCTATGTAGAGAACATTTCTCCAGCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp GTGAAAGAAGTGATGGACAGTCCCCTTCGATCCGTGCACTCCAAGTaGCCTCTCATAGGAGCCCTGGTAATGGTGAAAACTAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VKEVMDSPLRSVHSK*PLIGALVMVKTKFS
Trigger: TGAGAACTTAGTTTTCACCATTACCAGGGCTCCTATGAGAGGTCACTTGGAGTGCACGGATCGAAGGGGACTGTCCATCACTTCTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 90 bp TTGGTGTTCACTGCTCGGGCCGCACATTGGACCCGGGAGCCAGGCTaGAAGTATATGGAGTCTAATGTAATCATTTTGGATGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: LVFTARAAHWTREPG*KYMESNVIILDDVK
Trigger: CTTCACATCATCCAAAATGATTACATTAGACTCCATATACTTTCAGCCTGGCTCCCGGGTCCAATGTGCGGCCCGAGCAGTGAACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp AGTATTGGTCGTCCAAGGTCATCCAGAATGACCACTCGAACAGTCTaGATGTTGACGCCAGGCGCAAAATCTAAATTGCGACTGATTCCC +
Preference number: 5 (lower is better)
Translates to: SIGRPRSSRMTTRTV*MLTPGAKSKLRLIP
Trigger: GGGAATCAGTCGCAATTTAGATTTTGCGCCTGGCGTCAACATGCAGACTGTTCGAGTGGTCATTCTGGATGACCTTGGACGACCAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTGGCCAGGGTACGAAGGGTAGAAGCTCCTTTGTTCACCACAATTTaGGGGACACTGTTGTCAACAGGTAACACCTGGATTTTCATCACT +
Preference number: 5 (lower is better)
Translates to: VARVRRVEAPLFTTI*GTLLSTGNTWIFIT
Trigger: AGTGATGAAAATCCAGGTGTTACCTGTTGACAACAGTGTCCCCCAAATTGTGGTGAACAAAGGAGCTTCTACCCTTCGTACCCTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp CTGTCCTCCACTTTGAGTATTTTGCTTGTGATCATGAACCCTAAATaGCCAGTGGCCAGGGTACGAAGGGTAGAAGCTCCTTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: LSSTLSILLVIMNPK*PVARVRRVEAPLFT
Trigger: GGTGAACAAAGGAGCTTCTACCCTTCGTACCCTGGCCACTGGCCATTTAGGGTTCATGATCACAAGCAAAATACTCAAAGTGGAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AACTTGTCACCGATCCTCCCGCCCATGGGCATGCTCAAAAGGACCTaGAAAGTCTCCTCCTCTTCGTACAAAGAGTCATCAATTACCAAA +
Preference number: 5 (lower is better)
Translates to: NLSPILPPMGMLKRT*KVSSSSYKESSITK
Trigger: TTTGGTAATTGATGACTCTTTGTACGAAGAGGAGGAGACTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp GTTGATGTTCTCACTGGCACAAATAGAGCCTGTTTTCTCATAGTCTaGATATTTGGGGTTGCAGGCCGTAATGCAGACAACCGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: VDVLTGTNRACFLIV*IFGVAGRNADNRVA
Trigger: GGCTACCCGGTTGTCTGCATTACGGCCTGCAACCCCAAATATCCAGACTATGAGAAAACAGGCTCTATTTGTGCCAGTGAGAACATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACAGCTCCTGGAATGCTTaGCAGTCCATCAAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: SWVELALVMTSCCLHGLDSSWNA*QSIKRV
Trigger: GACCCTTTTGATGGACTGCAAAGCATTCCAGGAGCT...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGATGCGCAGCACCAAGTaGTCACTCAGTGAACCGTCT +
Preference number: 5 (lower is better)
Translates to: SFYVFPSVRGDSWVELALMRSTK*SLSEPS
Trigger: AGACGGTTCACTGAGTGACAACTTGGTGCTGCGCAT...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAGTCCTCCAAGTGGAATaGTCCGCCTACATGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPVLQVE*SAYMQW
Trigger: CCACTGCATGTAGGCGGACAATTCCACTTGGAGGAC...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGTTGAGGATGAGTCTGTaGACCACCAGACTCATGCCT +
Preference number: 5 (lower is better)
Translates to: IMCHSLLYSLPELKATGQLRMSL*TTRLMP
Trigger: AGGCATGAGTCTGGTGGTCAACAGACTCATCCTCAA...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GCAACATGGTCATTCCCAAATTCTGAGGTAGCCAAACATGGAGCTAAGGGTCTGATTTGGGGGACACTGTaGTCAACAGGTAACACCTGG +
Preference number: 5 (lower is better)
Translates to: ATWSFPNSEVAKHGAKGLIWGTL*STGNTW
Trigger: CCAGGTGTTACCTGTTGACAACAGTGTCCCCCAAAT...CAGACCCTTAGCTCCATGTTTGGCTACCTCAGAATTTGGGAATGACCATGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGGACACTGTGGTTTCCTaGGCCCAGGTTGAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: SFYVFPSVRGDSWVELALDTVVS*AQVEKV
Trigger: TACCTTCTCAACCTGGGCCAAGGAAACCACAGTGTC...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGTGTCCTCTCTGCCTTaGGAGGGATCATCGTATATC +
Preference number: 5 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRVSSLP*EGSSYI
Trigger: GATATACGATGATCCCTCCAAAGGCAGAGAGGACAC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGGTGAGTTTGATGAGGTaGGCAAAGTCTGGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWVSLMR*AKSGSS
Trigger: AGAGGACCCAGACTTTGCCAACCTCATCAAACTCAC...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGACAGGCTCTCTGGGGTaGCAGGTGACTGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPETGSLG*QVTGRR
Trigger: CCGTCTGCCAGTCACCTGCAACCCCAGAGAGCCTGT...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp GAACTGGGGGAGGCCAGACAGAGATGTTCTCTTCCTGGATCACTGAAGAGAATGAGATATGTTGGATGTTaGTTCCCCGGTTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: ELGEARQRCSLPGSLKRMRYVGC*FPGCSQ
Trigger: CTGAGAACAACCGGGGAACAAACATCCAACATATCT...CATTCTCTTCAGTGATCCAGGAAGAGAACATCTCTGTCTGGCCTCCCCCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp AGCTGTCAGTCAAAGACTCATCCCCGCTATTCCAGTAGGAAATTCTaGCATGCTTTATGTCCTCCAAGTGGAATTGTCCGCCTACATGCA +
Preference number: 5 (lower is better)
Translates to: SCQSKTHPRYSSRKF*HALCPPSGIVRLHA
Trigger: TGCATGTAGGCGGACAATTCCACTTGGAGGACATAAAGCATGGCAGAATTTCCTACTGGAATAGCGGGGATGAGTCTTTGACTGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AAGGGGGTGATCAGCTTACTTTCACTTTCACTGACCACCAGGTTGTaGATGGTGACCACTGGCTTTTTGTTGTCTACGTCACTGATTGAG +
Preference number: 5 (lower is better)
Translates to: KGVISLLSLSLTTRL*MVTTGFLLSTSLIE
Trigger: CTCAATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGAAAGTGAAAGTAAGCTGATCACCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TTAATACAGTCAGGGGCTCTTAGCACCTTTGTCACGGAAAGCTCTCAGTTCTCTTTCTCTCGTTCGTCTTaGTCAAAGCGGATCACGCTG +
Preference number: 5 (lower is better)
Translates to: LIQSGALSTFVTESSQFSFSRSS*SKRITL
Trigger: CAGCGTGATCCGCTTTGACAAAGACGAACGAGAGAA...AGAGAACTGAGAGCTTTCCGTGACAAAGGTGCTAAGAGCCCCTGACTGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAATACAATGGCCTTGGTaGCCTGTGTCTCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPIQWPW*PVSLPP
Trigger: TGGTGGCAGAGACACAGGCAACCAAGGCCATTGTAT...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 90 bp ACACGCCCGTCATTCTCGTTGCAAGTGTACACTCTCTCTTTGAATTaGATTTTAGGCAAGTCTGAGGCAGAGTCATTTATGGACACGGTG +
Preference number: 5 (lower is better)
Translates to: TRPSFSLQVYTLSLN*ILGKSEAESFMDTV
Trigger: CACCGTGTCCATAAATGACTCTGCCTCAGACTTGCCTAAAATGCAATTCAAAGAGAGAGTGTACACTTGCAACGAGAATGACGGGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTTAAAAGAGTCAGCTTaGGGCAACAGGCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWLKESA*GNRPIS
Trigger: TGAGATTGGCCTGTTGCCCAAAGCTGACTCTTTTAA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CATTTCTCCTTCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTTTGTTCACCACAATTaGGGGGACACTGTTGTCAAC +
Preference number: 5 (lower is better)
Translates to: HFSFRTSAASLSQSRYGWFVHHN*GDTVVN
Trigger: GTTGACAACAGTGTCCCCCAAATTGTGGTGAACAAA...CCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGAAGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp AATTTGGTTTCTCCAAATTTGATAACAGCTTTGTCAGCCTCATCCTaGATCTTTATCAGGGTTTCGTTCTGCTCGCCCACTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: NLVSPNLITALSASS*IFIRVSFCSPTAAP
Trigger: TGGAGCTGCAGTGGGCGAGCAGAACGAAACCCTGATAAAGATCCAGGATGAGGCTGACAAAGCTGTTATCAAATTTGGAGAAACCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCGTGGGTTGAACTAGCCCTGGTCATGACTTCATGTTGTCTTCACGGATTAGACGGGATCATGATTGTCTaGGACTCTAAACATGAACTG +
Preference number: 5 (lower is better)
Translates to: SWVELALVMTSCCLHGLDGIMIV*DSKHEL
Trigger: CAGTTCATGTTTAGAGTCCAAGACAATCATGATCCC...GTCTAATCCGTGAAGACAACATGAAGTCATGACCAGGGCTAGTTCAACCCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAATCTCTGTCCTCCACTTaGAGTATTTTGCTTGTGATC +
Preference number: 5 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQSLSST*SILLVI
Trigger: GATCACAAGCAAAATACTCAAAGTGGAGGACAGAGA...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp AACTCTATGGTGTCTCTTTGCCGGCACGTCTACAACTCTCTTGCTTCACACCAAAATGGAACATATCACTaGTGGCATTTGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: NSMVSLCRHVYNSLASHQNGTYH*WHLLSL
Trigger: GAGAGAGAGCAAATGCCACAAGTGATATGTTCCATT...TTGGTGTGAAGCAAGAGAGTTGTAGACGTGCCGGCAAAGAGACACCATAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp CCGAGTGAGATTTGGCATAGACGCATCCTGGTCACAATATATGATAATGTGCCAATATATACAATGGCCTaGGTTGCCTGTGTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PSEIWHRRILVTIYDNVPIYTMA*VACVSA
Trigger: GGCAGAGACACAGGCAACCAAGGCCATTGTATATAT...TGGCACATTATCATATATTGTGACCAGGATGCGTCTATGCCAAATCTCACTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGACCAACACTGTACCATaGATTAACTGGTTCATGACA +
Preference number: 5 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRTNTVP*INWFMT
Trigger: TGTCATGAACCAGTTAATCAATGGTACAGTGTTGGT...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCAGGACCAGTGCAGCTTCCCTTTCTCAGTCAAGATATGGTTGGTATTCACAGGGCCATTAGGACTTTGTaGTTGATAACTTTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SGPVQLPFLSQDMVGIHRAIRTL*LITLVS
Trigger: GGAAACCAAAGTTATCAACAACAAAGTCCTAATGGC...CCTGTGAATACCAACCATATCTTGACTGAGAAAGGGAAGCTGCACTGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp ATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCTGAAGGCCACAGGGCAGTCCACTTTGAGTATTTaGCTTGTGATCATGAACCCT +
Preference number: 5 (lower is better)
Translates to: IMCHSLLYSLPELKATGQSTLSI*LVIMNP
Trigger: AGGGTTCATGATCACAAGCAAAATACTCAAAGTGGA...CTGCCCTGTGGCCTTCAGCTCAGGAAGTGAATATAGCAACGAATGGCACATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGCAATGCGCATGCTGGTaGGGTAAAGAGAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPEQCACW*GKESLA
Trigger: TGCAAGGCTCTCTTTACCCAACCAGCATGCGCATTG...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 90 bp TACTCTTTTTCAAAGGAGATCCACGCCCAATTCAGTCGAAAATGCTaGTTGGTTAACCTGTTTCCACCGTCATCTTCCACTATGAAATGG +
Preference number: 5 (lower is better)
Translates to: YSFSKEIHAQFSRKC*LVNLFPPSSSTMKW
Trigger: CCATTTCATAGTGGAAGATGACGGTGGAAACAGGTTAACCAACCAGCATTTTCGACTGAATTGGGCGTGGATCTCCTTTGAAAAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGGTGTACACTCTCTCTTaGAATTGCATTTTAGGCAAG +
Preference number: 5 (lower is better)
Translates to: SFYVFPSVRGDSWVELALVYTLS*NCILGK
Trigger: CTTGCCTAAAATGCAATTCAAAGAGAGAGTGTACAC...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTTCTATGTTTTCCCATCAGTAAGAGGTGATTCGTGGGTTGAACTAGCCCTGTTGGTTTCTCCAAATTaGATAACAGCTTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SFYVFPSVRGDSWVELALLVSPN*ITALSA
Trigger: GGCTGACAAAGCTGTTATCAAATTTGGAGAAACCAA...CAGGGCTAGTTCAACCCACGAATCACCTCTTACTGATGGGAAAACATAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGAGGCTTATCACACTCTaGTCACCTTCCAGCACTACA +
Preference number: 5 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPERLITL*SPSSTT
Trigger: TGTAGTGCTGGAAGGTGACAAGAGTGTGATAAGCCT...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS-3UTR CAA 90 bp TCCTGGTCACAATATATGATAATGTGCCATTCGTTGCTATATTCACTTCCTGAGATTAGGACTTTGTTGTaGATAACTTTGGTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SWSQYMIMCHSLLYSLPEIRTLL*ITLVSP
Trigger: TGGGGAAACCAAAGTTATCAACAACAAAGTCCTAAT...CTCAGGAAGTGAATATAGCAACGAATGGCACATTATCATATATTGTGACCAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp AGCGCAGCTGCAGGCGGACGCGGTCGCGGGAAGGGCTaGGAGCACCCAGGTGCGAGTAGCGCACCTCACCCG +
Preference number: 6 (lower is better)
Translates to: SAAAGGRGRGKG*EHPGASSAPHP
Trigger: CGGGTGAGGTGCGCTACTCGCACCTGGGTGCTCGCAGCCCTTCCCGCGACCGCGTCCGCCTGCAGCTGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GCACCTCACCCGGGCCATAGTCGCACGCAAAACGCTTaGGACTCAAGTGGCCCGGCCGCTGGGCCAGCGCGT +
Preference number: 6 (lower is better)
Translates to: APHPGHSRTQNA*DSSGPAAGPAR
Trigger: ACGCGCTGGCCCAGCGGCCGGGCCACTTGAGTCCCAAGCGTTTTGCGTGCGACTATGGCCCGGGTGAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp AGGTCTCCGAGTGCTCGTGTTCCCCGTCGCTCAGGATaGGCACTCTCCACGAGGCCCTGGTCTGGCCGGGGT +
Preference number: 6 (lower is better)
Translates to: RSPSARVPRRSG*ALSTRPWSGRG
Trigger: ACCCCGGCCAGACCAGGGCCTCGTGGAGAGTGCGCATCCTGAGCGACGGGGAACACGAGCACTCGGAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GGACTCAAGTGGCCCGGCCGCTGGGCCAGCGCGTCGTaGTCTAACACGGTCACTGTGCAGCGGTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: GLKWPGRWASAS*SNTVTVQRSPG
Trigger: GCCAGGAGACCGCTGCACAGTGACCGTGTTAGACAACGACGCGCTGGCCCAGCGGCCGGGCCACTTGAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GTAGGGACTCCCGAAGTCCCGGAGAGACCCAGGGACTaGAGTGCTGCACCGGGGCCAGCAGCCTGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: VGTPEVPERPRD*SAAPGPAACVE
Trigger: CTCCACACAGGCTGCTGGCCCCGGTGCAGCACTTCAGTCCCTGGGTCTCTCCGGGACTTCGGGAGTCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp AAACGCTTGGGACTCAAGTGGCCCGGCCGCTGGGCCAGCGCGTCGTaGTCTAACACGGTCACTGTGCAGCGGTCTCCTGGCTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: KRLGLKWPGRWASAS*SNTVTVQRSPGCTC
Trigger: GCAGGTGCAGCCAGGAGACCGCTGCACAGTGACCGTGTTAGACAACGACGCGCTGGCCCAGCGGCCGGGCCACTTGAGTCCCAAGCGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TCCCGAAGTCCCGGAGAGACCCAGGGACTGAAGTGCTaGACCGGGGCCAGCAGCCTGTGTGGAGACGTAGCT +
Preference number: 6 (lower is better)
Translates to: SRSPGETQGLKC*TGASSLCGDVA
Trigger: AGCTACGTCTCCACACAGGCTGCTGGCCCCGGTGCAGCACTTCAGTCCCTGGGTCTCTCCGGGACTTCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GACTCCCGAAGTCCCGGAGAGACCCAGGGACTGAAGTaGTGCACCGGGGCCAGCAGCCTGTGTGGAGACGTA +
Preference number: 6 (lower is better)
Translates to: DSRSPGETQGLK*CTGASSLCGDV
Trigger: TACGTCTCCACACAGGCTGCTGGCCCCGGTGCAGCACTTCAGTCCCTGGGTCTCTCCGGGACTTCGGGAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCCCAGGGCAGGATGCCGTCAGGAGGAATTCTTCCGTaGGGGACCTGCCTCTTGCCACGGCGGTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: SQGRMPSGGILP*GTCLLPRRFRE
Trigger: CTCCCTGAACCGCCGTGGCAAGAGGCAGGTCCCCCACGGAAGAATTCCTCCTGACGGCATCCTGCCCTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GGCACAGTTTCCCCCTCAGCCACTGTCAGCCCAGTGTaGGCGTTCAGGACCGGCGGCTGGTCATCCACAGGC +
Preference number: 6 (lower is better)
Translates to: GTVSPSATVSPV*AFRTGGWSSTG
Trigger: GCCTGTGGATGACCAGCCGCCGGTCCTGAACGCCAACACTGGGCTGACAGTGGCTGAGGGGGAAACTGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GGGGCCAGCAGCCTGTGTGGAGACGTAGCTTACCAGTaGCAGGAGCAGCAGCAGCAGCAGCAGCCTAGGCGA +
Preference number: 6 (lower is better)
Translates to: GASSLCGDVAYQ*QEQQQQQQPRR
Trigger: TCGCCTAGGCTGCTGCTGCTGCTGCTGCTCCTGTCACTGGTAAGCTACGTCTCCACACAGGCTGCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp ACCGATCTCCCCTGCGAGGGAGGGCGTGCTCCTGACTaGTCTCTTCTTCCAGCTCTTGGTGGTTGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: TDLPCEGGRAPD*SLLPALGGCLR
Trigger: CCGCAGGCAACCACCAAGAGCTGGAAGAAGAGAGCAGTCAGGAGCACGCCCTCCCTCGCAGGGGAGATCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CACGCAAAACGCTTGGGACTCAAGTGGCCCGGCCGCTaGGCCAGCGCGTCGTTGTCTAACACGGTCACTGTG +
Preference number: 6 (lower is better)
Translates to: HAKRLGLKWPGR*ASASLSNTVTV
Trigger: CACAGTGACCGTGTTAGACAACGACGCGCTGGCCCAGCGGCCGGGCCACTTGAGTCCCAAGCGTTTTGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GCACAGTTTCCCCCTCAGCCACTGTCAGCCCAGTGTTaGCGTTCAGGACCGGCGGCTGGTCATCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: AQFPPQPLSAQC*RSGPAAGHPQA
Trigger: TGCCTGTGGATGACCAGCCGCCGGTCCTGAACGCCAACACTGGGCTGACAGTGGCTGAGGGGGAAACTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CTCCGTAACGAGGCAAAGCGCTCAGACCTGACAAGATaGCCACGCGGCACTCCTCGGTCTCAGGCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: LRNEAKRSDLTR*PRGTPRSQAGR
Trigger: CCTACCAGCCTGAGACCGAGGAGTGCCGCGTGGGCATCTTGTCAGGTCTGAGCGCTTTGCCTCGTTACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TTTAGAGCCGGGCTGCCCTCTGGAGCCCCTCGCGAATaGAGCTCGACCACCATAGGCAGCCAGTCCCTGTTA +
Preference number: 6 (lower is better)
Translates to: FRAGLPSGAPRE*SSTTIGSQSLL
Trigger: TAACAGGGACTGGCTGCCTATGGTGGTCGAGCTGCATTCGCGAGGGGCTCCAGAGGGCAGCCCGGCTCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CAAGCACCTGGAAGTGTTCGCGTTTTAGAGCCGGGCTaGCCTCTGGAGCCCCTCGCGAATGCAGCTCGACCA +
Preference number: 6 (lower is better)
Translates to: QAPGSVRVLEPG*PLEPLANAARP
Trigger: TGGTCGAGCTGCATTCGCGAGGGGCTCCAGAGGGCAGCCCGGCTCTAAAACGCGAACACTTCCAGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GCAGAGTCGCTACTGGGAGAACCCAGAATAACAAGGTaGCCATGCCGGAGCCCAGCCACCACCTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: AESLLGEPRITR*PCRSPATTSSL
Trigger: GAGGCTGGAGGTGGTGGCTGGGCTCCGGCATGGCCACCTTGTTATTCTGGGTTCTCCCAGTAGCGACTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGCCAGGCGTCCCTCCTCACCAATGCGCATGCTGGTTaGGTAAAGAGAGCCTTGCAGCTCAGCTTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: SQASLLTNAHAG*VKRALQLSFRG
Trigger: CCCCCGGAAGCTGAGCTGCAAGGCTCTCTTTACCCAACCAGCATGCGCATTGGTGAGGAGGGACGCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GAGCACGGACGTCCGCACAGTGCTGGTGGCTGTCCCTaGCTGTGTGTAGCAGATCACCATCAGCTCCCGGCT +
Preference number: 6 (lower is better)
Translates to: EHGRPHSAGGCP*LCVADHHQLPA
Trigger: AGCCGGGAGCTGATGGTGATCTGCTACACACAGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CAGCCAGGCGTCCCTCCTCACCAATGCGCATGCTGGTaGGGTAAAGAGAGCCTTGCAGCTCAGCTTCCGGGG +
Preference number: 6 (lower is better)
Translates to: QPGVPPHQCACW*GKESLAAQLPG
Trigger: CCCCGGAAGCTGAGCTGCAAGGCTCTCTTTACCCAACCAGCATGCGCATTGGTGAGGAGGGACGCCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GGTGGGATAGGCACAGTTTCCCCCTCAGCCACTGTCAGCCCAGTGTaGGCGTTCAGGACCGGCGGCTGGTCATCCACAGGCACTAAAGTG +
Preference number: 6 (lower is better)
Translates to: GGIGTVSPSATVSPV*AFRTGGWSSTGTKV
Trigger: CACTTTAGTGCCTGTGGATGACCAGCCGCCGGTCCTGAACGCCAACACTGGGCTGACAGTGGCTGAGGGGGAAACTGTGCCTATCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GATACACAACCTGGCCAGCCGCCAGCTCCGCCACTGTaGAGGTCTTGGGAGCAGAGTCGCTACTGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: DTQPGQPPAPPL*RSWEQSRYWEN
Trigger: GTTCTCCCAGTAGCGACTCTGCTCCCAAGACCTTCACAGTGGCGGAGCTGGCGGCTGGCCAGGTTGTGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GAGGAACTCGAAGGGTCACGTAGGACTGCACGAGGTTaGGGACCTGGCCATCGGTCCCGATGGTTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: EELEGSRRTARG*GPGHRSRWFLH
Trigger: GTGGAGGAACCATCGGGACCGATGGCCAGGTCCTCAACCTCGTGCAGTCCTACGTGACCCTTCGAGTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CAGGAGCAGCAGCAGCAGCAGCAGCCTAGGCGACTGTaGGAGTATCGGCTGGAAGCTGGAGAACTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: QEQQQQQQPRRL*EYRLEAGELGC
Trigger: ACAGCCAAGTTCTCCAGCTTCCAGCCGATACTCGCACAGTCGCCTAGGCTGCTGCTGCTGCTGCTGCTCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TCGCTACTGGGAGAACCCAGAATAACAAGGTGGCCATaGCGGAGCCCAGCCACCACCTCCAGCCTCACAGCT +
Preference number: 6 (lower is better)
Translates to: SLLGEPRITRWP*RSPATTSSLTA
Trigger: AGCTGTGAGGCTGGAGGTGGTGGCTGGGCTCCGGCATGGCCACCTTGTTATTCTGGGTTCTCCCAGTAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TGCTTCTGCCACAGACCCTGCTCTTCCTGGGGGACATaGCTTTGGCGGAGAAGCAGGTGCCCCAAGCTTGAG +
Preference number: 6 (lower is better)
Translates to: CFCHRPCSSWGT*LWRRSRCPKLE
Trigger: CTCAAGCTTGGGGCACCTGCTTCTCCGCCAAAGGCATGTCCCCCAGGAAGAGCAGGGTCTGTGGCAGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GGGATTCCTGTACCACCATCCGAAGGGGACAGCCACTaGCCAGTTCTGGAGGGAGACGGTCCACGGGATGAA +
Preference number: 6 (lower is better)
Translates to: GIPVPPSEGDSH*PVLEGDGPRDE
Trigger: TTCATCCCGTGGACCGTCTCCCTCCAGAACTGGGCAGTGGCTGTCCCCTTCGGATGGTGGTACAGGAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp AATGTGAGTCGGAGCTCTGACTTCAAGTCGAAATGCTaGCAGCCGCCCACGCCCACGGGGGAGTGGAACACG +
Preference number: 6 (lower is better)
Translates to: NVSRSSDFKSKC*QPPTPTGEWNT
Trigger: CGTGTTCCACTCCCCCGTGGGCGTGGGCGGCTGGCAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp ACGAATGTGAGTCGGAGCTCTGACTTCAAGTCGAAATaGTGCCAGCCGCCCACGCCCACGGGGGAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: TNVSRSSDFKSK*CQPPTPTGEWN
Trigger: GTTCCACTCCCCCGTGGGCGTGGGCGGCTGGCAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACATTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AATGACCCTTGCTTCTGCCACAGACCCTGCTCTTCCTaGGGGACATGCCTTTGGCGGAGAAGCAGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: NDPCFCHRPCSS*GTCLWRRSRCP
Trigger: GGGGCACCTGCTTCTCCGCCAAAGGCATGTCCCCCAGGAAGAGCAGGGTCTGTGGCAGAAGCAAGGGTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GGTGCCAGGAGCCACATTCCCAGCTCGATCCTCTACTaGGAACTGGAACTGAGCCACTCGGGCTGCGACTCC +
Preference number: 6 (lower is better)
Translates to: GARSHIPSSILY*ELELSHSGCDS
Trigger: GGAGTCGCAGCCCGAGTGGCTCAGTTCCAGTTCCAAGTAGAGGATCGAGCTGGGAATGTGGCTCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CCGATGGTAACGATGGGGCTCATTAGTTCCAGGCCTTCATTCCCATaGGTGTTCACTGCTCGGGCCGCACATTGGACCCGGGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PMVTMGLISSRPSFP*VFTARAAHWTREPG
Trigger: GCCTGGCTCCCGGGTCCAATGTGCGGCCCGAGCAGTGAACACCAATGGGAATGAAGGCCTGGAACTAATGAGCCCCATCGTTACCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TTGCCACGGCGGTTCAGGGAGATATGTTGGATGTTTGTTCCCCGGTaGTTCTCAGCACCGATCTCCCCTGCGAGGGAGGGCGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: LPRRFREICWMFVPR*FSAPISPAREGVLL
Trigger: CAGGAGCACGCCCTCCCTCGCAGGGGAGATCGGTGCTGAGAACAACCGGGGAACAAACATCCAACATATCTCCCTGAACCGCCGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GGCAGGATGCCGTCAGGAGGAATTCTTCCGTGGGGGACCTGCCTCTaGCCACGGCGGTTCAGGGAGATATGTTGGATGTTTGTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: GRMPSGGILPWGTCL*PRRFREICWMFVPR
Trigger: CCGGGGAACAAACATCCAACATATCTCCCTGAACCGCCGTGGCAAGAGGCAGGTCCCCCACGGAAGAATTCCTCCTGACGGCATCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp AAGGAGTTCTCCGTAACGAGGCAAAGCGCTCAGACCTaGCAAGATGCCCACGCGGCACTCCTCGGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: KEFSVTRQSAQT*QDAHAALLGLR
Trigger: CCTGAGACCGAGGAGTGCCGCGTGGGCATCTTGTCAGGTCTGAGCGCTTTGCCTCGTTACGGAGAACTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GTTTGTTCCCCGGTTGTTCTCAGCACCGATCTCCCCTaGGAGGGAGGGCGTGCTCCTGACTGCTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VCSPVVLSTDLP*EGGRAPDCSLL
Trigger: AAGAAGAGAGCAGTCAGGAGCACGCCCTCCCTCGCAGGGGAGATCGGTGCTGAGAACAACCGGGGAACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGAGGTCCCTCTATCTCCGGCCCCTCCCTGGACCTGTaGGTAGTGAAGGAGTTCTCCGTAACGAGGCAAAGC +
Preference number: 6 (lower is better)
Translates to: RGPSISGPSLDL*VVKEFSVTRQS
Trigger: GCTTTGCCTCGTTACGGAGAACTCCTTCACTACCCACAGGTCCAGGGAGGGGCCGGAGATAGAGGGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CCAGTGGAGCCGGCGAGTGGTTCTCATCTGTGTCCGTaGGAGGCTGGGTCACTGTGTACTGTAACTCTCGGT +
Preference number: 6 (lower is better)
Translates to: PVEPASGSHLCP*EAGSLCTVTLG
Trigger: ACCGAGAGTTACAGTACACAGTGACCCAGCCTCCCACGGACACAGATGAGAACCACTCGCCGGCTCCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ACGGTCCCCTGGCCGAACGTTCACTCTGAGAGTGATTaGCACCACATGGTGTCTGTCGCTGACCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: TVPWPNVHSESD*HHMVSVADLQG
Trigger: TCCCTGGAGGTCAGCGACAGACACCATGTGGTGCCAATCACTCTCAGAGTGAACGTTCGGCCAGGGGACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCACAGCCAGGCGTCCCTCCTCACCAATGCGCATGCTaGTTGGGTAAAGAGAGCCTTGCAGCTCAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: SQPGVPPHQCAC*LGKESLAAQLP
Trigger: CGGAAGCTGAGCTGCAAGGCTCTCTTTACCCAACCAGCATGCGCATTGGTGAGGAGGGACGCCTGGCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGGAGAATCAGCCAGGCAGCCATATTCCGCATTCGCTaGGCTGTACTTGGGCACGTAGCCGTCATCCCCCGT +
Preference number: 6 (lower is better)
Translates to: RRISQAAIFRIR*AVLGHVAVIPR
Trigger: ACGGGGGATGACGGCTACGTGCCCAAGTACAGCCCAGCGAATGCGGAATATGGCTGCCTGGCTGATTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GGGGACATCATGGGCTCAGTGCTTCCAGAGCCCTTTGGAGTATCCTaGCCCTTAGTGCTCCTGTTCCTGCACATGACGGCCGCAGCCACA +
Preference number: 6 (lower is better)
Translates to: GDIMGSVLPEPFGVS*PLVLLFLHMTAAAT
Trigger: TGTGGCTGCGGCCGTCATGTGCAGGAACAGGAGCACTAAGGGCAAGGATACTCCAAAGGGCTCTGGAAGCACTGAGCCCATGATGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CCGCCTACATGCAGTGGCCGTCCAGATATTTGCATGTGGCCGTGTTaGGGGGCCTGTGTGAGAGTGAACGAGATGTGGGTCACATCCGTG +
Preference number: 6 (lower is better)
Translates to: PPTCSGRPDICMWPC*GACVRVNEMWVTSV
Trigger: CACGGATGTGACCCACATCTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp ACATTCCCAGCTCGATCCTCTACTTGGAACTGGAACTaGGCCACTCGGGCTGCGACTCCTAGCTCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: TFPARSSTWNWN*ATRAATPSSCP
Trigger: AGGGCAGGAGCTAGGAGTCGCAGCCCGAGTGGCTCAGTTCCAGTTCCAAGTAGAGGATCGAGCTGGGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GATGGCAGTGTCGTACACGAATGTGAGTCGGAGCTCTaGCTTCAAGTCGAAATGCTGCCAGCCGCCCACGCC +
Preference number: 6 (lower is better)
Translates to: DGSVVHECESEL*LQVEMLPAAHA
Trigger: GGCGTGGGCGGCTGGCAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACATTCGTGTACGACACTGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GGCACTAAAGTGATAGGGAACAGGAACTGGACCTGGTaGCTGCCTCCTCCATCGGACATGCGCAGCACCAAG +
Preference number: 6 (lower is better)
Translates to: GTKVIGNRNWTW*LPPPSDMRSTK
Trigger: CTTGGTGCTGCGCATGTCCGATGGAGGAGGCAGGCACCAGGTCCAGTTCCTGTTCCCTATCACTTTAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ACTGTCAGCCCAGTGTTGGCGTTCAGGACCGGCGGCTaGTCATCCACAGGCACTAAAGTGATAGGGAACAGG +
Preference number: 6 (lower is better)
Translates to: TVSPVLAFRTGG*SSTGTKVIGNR
Trigger: CCTGTTCCCTATCACTTTAGTGCCTGTGGATGACCAGCCGCCGGTCCTGAACGCCAACACTGGGCTGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TACCACCATCCGAAGGGGACAGCCACTGCCCAGTTCTaGAGGGAGACGGTCCACGGGATGAATGCGTATTAC +
Preference number: 6 (lower is better)
Translates to: YHHPKGTATAQF*RETVHGMNAYY
Trigger: GTAATACGCATTCATCCCGTGGACCGTCTCCCTCCAGAACTGGGCAGTGGCTGTCCCCTTCGGATGGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GCCGGCGAGTGGTTCTCATCTGTGTCCGTGGGAGGCTaGGTCACTGTGTACTGTAACTCTCGGTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: AGEWFSSVSVGG*VTVYCNSRSSV
Trigger: CACAGATGACCGAGAGTTACAGTACACAGTGACCCAGCCTCCCACGGACACAGATGAGAACCACTCGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CCGCCTACATGCAGTGGCCGTCCAGATATTTGCATGTaGCCGTGTTTGGGGGCCTGTGTGAGAGTGAACGAG +
Preference number: 6 (lower is better)
Translates to: PPTCSGRPDICM*PCLGACVRVNE
Trigger: CTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CCAGGCAGCCATATTCCGCATTCGCTGGGCTGTACTTaGGCACGTAGCCGTCATCCCCCGTGCATAAGAACA +
Preference number: 6 (lower is better)
Translates to: PGSHIPHSLGCT*ARSRHPPCIRT
Trigger: TGTTCTTATGCACGGGGGATGACGGCTACGTGCCCAAGTACAGCCCAGCGAATGCGGAATATGGCTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CCGAGCTGTCGTTGTAGTGGCTCTGCGGGGACATCATaGGCTCAGTGCTTCCAGAGCCCTTTGGAGTATCCT +
Preference number: 6 (lower is better)
Translates to: PSCRCSGSAGTS*AQCFQSPLEYP
Trigger: AGGATACTCCAAAGGGCTCTGGAAGCACTGAGCCCATGATGTCCCCGCAGAGCCACTACAACGACAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GCAGGCTCATCATCCCTGTCTGTGAGGATGGTCACATaGGCTCCTGGAAACTTGTCACCGATCCTCCCGCCC +
Preference number: 6 (lower is better)
Translates to: AGSSSLSVRMVT*APGNLSPILPP
Trigger: GGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCAATGTGACCATCCTCACAGACAGGGATGATGAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp ACGATGGGGCTCATTAGTTCCAGGCCTTCATTCCCATaGGTGTTCACTGCTCGGGCCGCACATTGGACCCGG +
Preference number: 6 (lower is better)
Translates to: TMGLISSRPSFP*VFTARAAHWTR
Trigger: CCGGGTCCAATGTGCGGCCCGAGCAGTGAACACCAATGGGAATGAAGGCCTGGAACTAATGAGCCCCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CGGTTCAGGGAGATATGTTGGATGTTTGTTCCCCGGTaGTTCTCAGCACCGATCTCCCCTGCGAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: RFREICWMFVPR*FSAPISPAREG
Trigger: GCCCTCCCTCGCAGGGGAGATCGGTGCTGAGAACAACCGGGGAACAAACATCCAACATATCTCCCTGAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CAAGTTCTGGGGTCCACTGCCTATGGGACCCGTGAGCGGCCGATATaGACCCTCATAGAGAATAAGGCCAGTGTTTCGTGTGACCACGGG +
Preference number: 6 (lower is better)
Translates to: QVLGSTAYGTRERPI*TLIENKASVSCDHG
Trigger: CCCGTGGTCACACGAAACACTGGCCTTATTCTCTATGAGGGTCAATATCGGCCGCTCACGGGTCCCATAGGCAGTGGACCCCAGAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp CTGTTGCCGCCACTCTGTCACCGTTCGCTCGTAAAATaGCCCTTGCTTCTGCCACAGACCCTGCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LLPPLCHRSLVK*PLLLPQTLLFL
Trigger: CAGGAAGAGCAGGGTCTGTGGCAGAAGCAAGGGTCATTTTACGAGCGAACGGTGACAGAGTGGCGGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp CCACTGCCCAGTTCTGGAGGGAGACGGTCCACGGGATaGATGCGTATTACAAACCTCTGGATCCCAGACTGG +
Preference number: 6 (lower is better)
Translates to: PLPSSGGRRSTG*MRITNLWIPDW
Trigger: CCAGTCTGGGATCCAGAGGTTTGTAATACGCATTCATCCCGTGGACCGTCTCCCTCCAGAACTGGGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TCTTCCTGGGGGACATGCCTTTGGCGGAGAAGCAGGTaGCCCAAGCTTGAGAAGGGTGGCAACAGGACAAAA +
Preference number: 6 (lower is better)
Translates to: SSWGTCLWRRSR*PKLEKGGNRTK
Trigger: TTTTGTCCTGTTGCCACCCTTCTCAAGCTTGGGGCACCTGCTTCTCCGCCAAAGGCATGTCCCCCAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GAGATGTGGGTCACATCCGTGTCAACATCACTCACATaGAGCTCGGTCTCACGCAGGATGTGGTGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: EMWVTSVSTSLT*SSVSRRMWWPF
Trigger: GAAGGGCCACCACATCCTGCGTGAGACCGAGCTGCATGTGAGTGATGTTGACACGGATGTGACCCACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp AGTTCACAGCCAGGCGTCCCTCCTCACCAATGCGCATaGTGGTTGGGTAAAGAGAGCCTTGCAGCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SSQPGVPPHQCA*WLGKESLAAQL
Trigger: AAGCTGAGCTGCAAGGCTCTCTTTACCCAACCAGCATGCGCATTGGTGAGGAGGGACGCCTGGCTGTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GCTTCTAGGTCATCTTCATCACTGATGACCAAGTTCTaGGGTCCACTGCCTATGGGACCCGTGAGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: ASRSSSSLMTKF*GPLPMGPVSGR
Trigger: TCGGCCGCTCACGGGTCCCATAGGCAGTGGACCCCAGAACTTGGTCATCAGTGATGAAGATGACCTAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCATCCACAGGCACTAAAGTGATAGGGAACAGGAACTaGACCTGGTGCCTGCCTCCTCCATCGGACATGCGC +
Preference number: 6 (lower is better)
Translates to: SSTGTKVIGNRN*TWCLPPPSDMR
Trigger: GCGCATGTCCGATGGAGGAGGCAGGCACCAGGTCCAGTTCCTGTTCCCTATCACTTTAGTGCCTGTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCACTCACATGCAGCTCGGTCTCACGCAGGATGTGGTaGCCCTTCTCCTCAACGGTGAAGCCAGTGTTGACA +
Preference number: 6 (lower is better)
Translates to: SLTCSSVSRRMW*PFSSTVKPVLT
Trigger: TGTCAACACTGGCTTCACCGTTGAGGAGAAGGGCCACCACATCCTGCGTGAGACCGAGCTGCATGTGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGTCAGAGTAAGAGAGCACGGACGTCCGCACAGTGCTaGTGGCTGTCCCTTGCTGTGTGTAGCAGATCACCA +
Preference number: 6 (lower is better)
Translates to: SQSKRARTSAQC*WLSLAVCSRSP
Trigger: TGGTGATCTGCTACACACAGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCGTGCTCTCTTACTCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TGGCTCCTGGAAACTTGTCACCGATCCTCCCGCCCATaGGCATGCTCAAAAGGACCTGGAAAGTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: WLLETCHRSSRP*ACSKGPGKSPP
Trigger: AGGAGGAGACTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TGCAGTGGCCGTCCAGATATTTGCATGTGGCCGTGTTaGGGGGCCTGTGTGAGAGTGAACGAGATGTGGGTC +
Preference number: 6 (lower is better)
Translates to: CSGRPDICMWPC*GACVRVNEMWV
Trigger: GACCCACATCTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CTGGGGTTGCAGGTGACTGGCAGACGGTACTCCTGGTaGGATGGAGTGGTGCAGGGTACCAACTTTACTGTG +
Preference number: 6 (lower is better)
Translates to: LGLQVTGRRYSW*DGVVQGTNFTV
Trigger: CACAGTAAAGTTGGTACCCTGCACCACTCCATCCAACCAGGAGTACCGTCTGCCAGTCACCTGCAACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp ATGGGCTCAGTGCTTCCAGAGCCCTTTGGAGTATCCTaGCCCTTAGTGCTCCTGTTCCTGCACATGACGGCC +
Preference number: 6 (lower is better)
Translates to: MGSVLPEPFGVS*PLVLLFLHMTA
Trigger: GGCCGTCATGTGCAGGAACAGGAGCACTAAGGGCAAGGATACTCCAAAGGGCTCTGGAAGCACTGAGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp ACCTTCCAGCACTACAAACTGTTCACCAAGAGAAATCTCAGGGGCTaGGCTGTCCACGGGGAGGATGGTCACCCACACAGTGACGCCTTG +
Preference number: 6 (lower is better)
Translates to: TFQHYKLFTKRNLRG*AVHGEDGHPHSDAL
Trigger: CAAGGCGTCACTGTGTGGGTGACCATCCTCCCCGTGGACAGCCAAGCCCCTGAGATTTCTCTTGGTGAACAGTTTGTAGTGCTGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCATCATCCCTGTCTGTGAGGATGGTCACATTGGCTCCTGGAAACTaGTCACCGATCCTCCCGCCCATGGGCATGCTCAAAAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: SSSLSVRMVTLAPGN*SPILPPMGMLKRTW
Trigger: CCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCAATGTGACCATCCTCACAGACAGGGATGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GTGGGTGTTCAGGCTGAACTCAGTCGCCACGGGATCGCTGACCTGTaGGAATCGAATGTCAAGGTCAAAGGTGACAGGCTCTCTGGGGTT +
Preference number: 6 (lower is better)
Translates to: VGVQAELSRHGIADL*ESNVKVKGDRLSGV
Trigger: AACCCCAGAGAGCCTGTCACCTTTGACCTTGACATTCGATTCCAACAGGTCAGCGATCCCGTGGCGACTGAGTTCAGCCTGAACACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp AATTGTCCGCCTACATGCAGTGGCCGTCCAGATATTTaGATGTGGCCGTGTTTGGGGGCCTGTGTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: NCPPTCSGRPDI*MWPCLGACVRV
Trigger: CACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp ACAACAGAGCCCTCCAGGATGTCCCTCTGGGTGAACTaGTCAGCTGGAGCTCCGTTGACTAAGATTTCCCCA +
Preference number: 6 (lower is better)
Translates to: TTEPSRMSLWVN*SAGAPLTKISP
Trigger: TGGGGAAATCTTAGTCAACGGAGCTCCAGCTGAGCAGTTCACCCAGAGGGACATCCTGGAGGGCTCTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GATCTCCACTGTAGTCACTGTGGGGAACTCCAGGATTaGCAGCACAGGCTCCGAGAGAACCACTTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: DLHCSHCGELQD*QHRLRENHLEG
Trigger: ACCTTCCAAGTGGTTCTCTCGGAGCCTGTGCTGGCAATCCTGGAGTTCCCCACAGTGACTACAGTGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TGTAGTCAGAGTAAGAGAGCACGGACGTCCGCACAGTaGTGGTGGCTGTCCCTTGCTGTGTGTAGCAGATCA +
Preference number: 6 (lower is better)
Translates to: CSQSKRARTSAQ*WWLSLAVCSRS
Trigger: TGATCTGCTACACACAGCAAGGGACAGCCACCAGCACTGTGCGGACGTCCGTGCTCTCTTACTCTGACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CTGGAAACTTGTCACCGATCCTCCCGCCCATGGGCATaGTCAAAAGGACCTGGAAAGTCTCCTCCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: LETCHRSSRPWA*SKGPGKSPPLR
Trigger: ACGAAGAGGAGGAGACTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CCGTGTTTGGGGGCCTGTGTGAGAGTGAACGAGATGTaGGTCACATCCGTGTCAACATCACTCACATGCAGC +
Preference number: 6 (lower is better)
Translates to: PCLGACVRVNEM*VTSVSTSLTCS
Trigger: GCTGCATGTGAGTGATGTTGACACGGATGTGACCCACATCTCGTTCACTCTCACACAGGCCCCCAAACACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCTCTGGGGTTGCAGGTGACTGGCAGACGGTACTCCTaGTTGGATGGAGTGGTGCAGGGTACCAACTTTACT +
Preference number: 6 (lower is better)
Translates to: SLGLQVTGRRYS*LDGVVQGTNFT
Trigger: AGTAAAGTTGGTACCCTGCACCACTCCATCCAACCAGGAGTACCGTCTGCCAGTCACCTGCAACCCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ACCTGCCTCTTGCCACGGCGGTTCAGGGAGATATGTTaGATGTTTGTTCCCCGGTTGTTCTCAGCACCGATC +
Preference number: 6 (lower is better)
Translates to: TCLLPRRFREIC*MFVPRLFSAPI
Trigger: GATCGGTGCTGAGAACAACCGGGGAACAAACATCCAACATATCTCCCTGAACCGCCGTGGCAAGAGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GGGTCCACTGCCTATGGGACCCGTGAGCGGCCGATATaGACCCTCATAGAGAATAAGGCCAGTGTTTCGTGT +
Preference number: 6 (lower is better)
Translates to: GSTAYGTRERPI*TLIENKASVSC
Trigger: ACACGAAACACTGGCCTTATTCTCTATGAGGGTCAATATCGGCCGCTCACGGGTCCCATAGGCAGTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GAATTGTCCGCCTACATGCAGTGGCCGTCCAGATATTaGCATGTGGCCGTGTTTGGGGGCCTGTGTGAGAGT +
Preference number: 6 (lower is better)
Translates to: ELSAYMQWPSRY*HVAVFGGLCES
Trigger: ACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GTCCACGGGGAGGATGGTCACCCACACAGTGACGCCTaGAACGATGCTGCTACCGATTCTCCATTCTTGAGA +
Preference number: 6 (lower is better)
Translates to: VHGEDGHPHSDA*NDAATDSPFLR
Trigger: TCTCAAGAATGGAGAATCGGTAGCAGCATCGTTCAAGGCGTCACTGTGTGGGTGACCATCCTCCCCGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CTGTCTGTGAGGATGGTCACATTGGCTCCTGGAAACTaGTCACCGATCCTCCCGCCCATGGGCATGCTCAAA +
Preference number: 6 (lower is better)
Translates to: LSVRMVTLAPGN*SPILPPMGMLK
Trigger: TTTGAGCATGCCCATGGGCGGGAGGATCGGTGACAAGTTTCCAGGAGCCAATGTGACCATCCTCACAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp AAGTCTGAGGCAGAGTCATTTATGGACACGGTGGCCTaGCTGGGCTCCCCAAGGGCAGCGTTCATAGGCATT +
Preference number: 6 (lower is better)
Translates to: KSEAESFMDTVA*LGSPRAAFIGI
Trigger: AATGCCTATGAACGCTGCCCTTGGGGAGCCCAGCAAGGCCACCGTGTCCATAAATGACTCTGCCTCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TTCATTCCCATTGGTGTTCACTGCTCGGGCCGCACATaGGACCCGGGAGCCAGGCTGAAAGTATATGGAGTC +
Preference number: 6 (lower is better)
Translates to: FIPIGVHCSGRT*DPGARLKVYGV
Trigger: GACTCCATATACTTTCAGCCTGGCTCCCGGGTCCAATGTGCGGCCCGAGCAGTGAACACCAATGGGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CGAATGTCAAGGTCAAAGGTGACAGGCTCTCTGGGGTaGCAGGTGACTGGCAGACGGTACTCCTGGTTGGAT +
Preference number: 6 (lower is better)
Translates to: RMSRSKVTGSLG*QVTGRRYSWLD
Trigger: ATCCAACCAGGAGTACCGTCTGCCAGTCACCTGCAACCCCAGAGAGCCTGTCACCTTTGACCTTGACATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CAGGCTGAACTCAGTCGCCACGGGATCGCTGACCTGTaGGAATCGAATGTCAAGGTCAAAGGTGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: QAELSRHGIADL*ESNVKVKGDRL
Trigger: GAGCCTGTCACCTTTGACCTTGACATTCGATTCCAACAGGTCAGCGATCCCGTGGCGACTGAGTTCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GACCTGCCTCTTGCCACGGCGGTTCAGGGAGATATGTaGGATGTTTGTTCCCCGGTTGTTCTCAGCACCGAT +
Preference number: 6 (lower is better)
Translates to: DLPLATAVQGDM*DVCSPVVLSTD
Trigger: ATCGGTGCTGAGAACAACCGGGGAACAAACATCCAACATATCTCCCTGAACCGCCGTGGCAAGAGGCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CTCCAAGTGGAATTGTCCGCCTACATGCAGTGGCCGTCCAGATATTaGCATGTGGCCGTGTTTGGGGGCCTGTGTGAGAGTGAACGAGAT +
Preference number: 6 (lower is better)
Translates to: LQVELSAYMQWPSRY*HVAVFGGLCESERD
Trigger: ATCTCGTTCACTCTCACACAGGCCCCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp AGGCTCCACTCCTCTGTGGACACTCTGGACATAGTTAATGTGTCCTaGCCTGAGATCCTTCAGCGTGAAGGCACTTATGGCAACCCCGGC +
Preference number: 6 (lower is better)
Translates to: RLHSSVDTLDIVNVS*PEILQREGTYGNPG
Trigger: GCCGGGGTTGCCATAAGTGCCTTCACGCTGAAGGATCTCAGGCAAGGACACATTAACTATGTCCAGAGTGTCCACAGAGGAGTGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TGTTGGAATCGAATGTCAAGGTCAAAGGTGACAGGCTCTCTGGGGTaGCAGGTGACTGGCAGACGGTACTCCTGGTTGGATGGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: CWNRMSRSKVTGSLG*QVTGRRYSWLDGVV
Trigger: CACCACTCCATCCAACCAGGAGTACCGTCTGCCAGTCACCTGCAACCCCAGAGAGCCTGTCACCTTTGACCTTGACATTCGATTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp AAGTTGTCACTCAGTGAACCGTCTTTGTCATCATGCTaGTACACAACCTGGCCAGCCGCCAGCTCCGCCACT +
Preference number: 6 (lower is better)
Translates to: KLSLSEPSLSSC*YTTWPAASSAT
Trigger: AGTGGCGGAGCTGGCGGCTGGCCAGGTTGTGTATCAGCATGATGACAAAGACGGTTCACTGAGTGACAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GGACACACGGCTTCTCCATCTCACCAGGGAGGAATGTaGCAGTGGAAACATCGGTATTTGGGCGTTCCTCGA +
Preference number: 6 (lower is better)
Translates to: GHTASPSHQGGM*QWKHRYLGVPR
Trigger: TCGAGGAACGCCCAAATACCGATGTTTCCACTGTCACATTCCTCCCTGGTGAGATGGAGAAGCCGTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp AGCATTTGTGATTCCCAACTCTCGTGCCGTCAGGGCTaGGGGTCAGCTCAAAGTTGGACAGCTCTCTTGTGG +
Preference number: 6 (lower is better)
Translates to: SICDSQLSCRQG*GSAQSWTALLW
Trigger: CCACAAGAGAGCTGTCCAACTTTGAGCTGACCCTCAGCCCTGACGGCACGAGAGTTGGGAATCACAAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp TCAGGTTTCGGTAGAAGCGTAAGGTGCTGGAACCCCTaGCCGGCACACTGTACTGGTAAGGATAGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: SGFGRSVRCWNP*PAHCTGKDRSL
Trigger: GAGAGACCTATCCTTACCAGTACAGTGTGCCGGTCAGGGGTTCCAGCACCTTACGCTTCTACCGAAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GAAGCAGGATGGGACAGCACAAACAAGCCATGGAACTaGGCCTCTGTTTTGAAGTTCACAGCCAGGCGTCCC +
Preference number: 6 (lower is better)
Translates to: EAGWDSTNKPWN*ASVLKFTARRP
Trigger: GGGACGCCTGGCTGTGAACTTCAAAACAGAGGCTCAGTTCCATGGCTTGTTTGTGCTGTCCCATCCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp TGTGTAGGTGCCCGAGTAGTCACGGACCGCAAAGTCTaGCACGAAACTCCACTGCTGGACTGGCTGATTGTA +
Preference number: 6 (lower is better)
Translates to: CVGARVVTDRKV*HETPLLDWLIV
Trigger: TACAATCAGCCAGTCCAGCAGTGGAGTTTCGTGTCAGACTTTGCGGTCCGTGACTACTCGGGCACCTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CAACCGGGTAGCCAGACACAGGTCCAGTGTCCTCTCTaGCTTTGGAGGGATCATCGTATATCAGCAAGGACA +
Preference number: 6 (lower is better)
Translates to: QPGSQTQVQCPL*LWRDHRISART
Trigger: TGTCCTTGCTGATATACGATGATCCCTCCAAAGGCAGAGAGGACACTGGACCTGTGTCTGGCTACCCGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp ATGGAGTGGTGCAGGGTACCAACTTTACTGTGTAGGTaGCCGAGTAGTCACGGACCGCAAAGTCTGACACGA +
Preference number: 6 (lower is better)
Translates to: MEWCRVPTLLCR*PSSHGPQSLTR
Trigger: TCGTGTCAGACTTTGCGGTCCGTGACTACTCGGGCACCTACACAGTAAAGTTGGTACCCTGCACCACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CTGGGCTGTACTTGGGCACGTAGCCGTCATCCCCCGTaGATAAGAACACCTTCTCAATGCTGCAGTAAAAGG +
Preference number: 6 (lower is better)
Translates to: LGCTWARSRHPP*IRTPSQCCSKR
Trigger: CCTTTTACTGCAGCATTGAGAAGGTGTTCTTATGCACGGGGGATGACGGCTACGTGCCCAAGTACAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AAGAGTCAGCTTTGGGCAACAGGCCAATCTCACCACTaGTGTGAGCGTAGACAACAGAGCCCTCCAGGATGT +
Preference number: 6 (lower is better)
Translates to: KSQLWATGQSHH*CERRQQSPPGC
Trigger: ACATCCTGGAGGGCTCTGTTGTCTACGCTCACACCAGTGGTGAGATTGGCCTGTTGCCCAAAGCTGACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ACTACAAACTGTTCACCAAGAGAAATCTCAGGGGCTTaGCTGTCCACGGGGAGGATGGTCACCCACACAGTG +
Preference number: 6 (lower is better)
Translates to: TTNCSPREISGA*LSTGRMVTHTV
Trigger: CACTGTGTGGGTGACCATCCTCCCCGTGGACAGCCAAGCCCCTGAGATTTCTCTTGGTGAACAGTTTGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CCGATCCTCCCGCCCATGGGCATGCTCAAAAGGACCTaGAAAGTCTCCTCCTCTTCGTACAAAGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: PILPPMGMLKRT*KVSSSSYKESS
Trigger: TGATGACTCTTTGTACGAAGAGGAGGAGACTTTCCAGGTCCTTTTGAGCATGCCCATGGGCGGGAGGATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGTGAGTTTGATGAGGTTGGCAAAGTCTGGGTCCTCTaGGCCAGTGTAGCGCAACTTAGCGGAGAATGGCTC +
Preference number: 6 (lower is better)
Translates to: SEFDEVGKVWVL*ASVAQLSGEWL
Trigger: GAGCCATTCTCCGCTAAGTTGCGCTACACTGGCCCAGAGGACCCAGACTTTGCCAACCTCATCAAACTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CTCCGTATAAGGCGGAGGGAAAATGTGAGGCCCGGATaGTCAGCTGACACGATCAGTGAGCTGGTAAAGGAA +
Preference number: 6 (lower is better)
Translates to: LRIRRRENVRPG*SADTISELVKE
Trigger: TTCCTTTACCAGCTCACTGATCGTGTCAGCTGACCATCCGGGCCTCACATTTTCCCTCCGCCTTATACGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GTTGCAGGTGACTGGCAGACGGTACTCCTGGTTGGATaGAGTGGTGCAGGGTACCAACTTTACTGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: VAGDWQTVLLVG*SGAGYQLYCVG
Trigger: ACCTACACAGTAAAGTTGGTACCCTGCACCACTCCATCCAACCAGGAGTACCGTCTGCCAGTCACCTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGGCTGAACTCAGTCGCCACGGGATCGCTGACCTGTTaGAATCGAATGTCAAGGTCAAAGGTGACAGGCTCT +
Preference number: 6 (lower is better)
Translates to: RLNSVATGSLTC*NRMSRSKVTGS
Trigger: AGAGCCTGTCACCTTTGACCTTGACATTCGATTCCAACAGGTCAGCGATCCCGTGGCGACTGAGTTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp AGCATGCCGTCTATGTGCGGCATAGTGACAGTGAGTTaGATGAGGTTGGCAAAGTCTGGGTCCTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: SMPSMCGIVTVS*MRLAKSGSSGP
Trigger: TGGCCCAGAGGACCCAGACTTTGCCAACCTCATCAAACTCACTGTCACTATGCCGCACATAGACGGCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp ATTTTAGGCAAGTCTGAGGCAGAGTCATTTATGGACACGGTGGCCTaGCTGGGCTCCCCAAGGGCAGCGTTCATAGGCATTCGAAGTACC +
Preference number: 6 (lower is better)
Translates to: ILGKSEAESFMDTVA*LGSPRAAFIGIRST
Trigger: GGTACTTCGAATGCCTATGAACGCTGCCCTTGGGGAGCCCAGCAAGGCCACCGTGTCCATAAATGACTCTGCCTCAGACTTGCCTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp ATTGACCTGGGCTTGGGTAAAATGGCTCACCACCACTaGGGGATTATCAGTGAAGACCAACGTGCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: IDLGLGKMAHHH*GIISEDQRAQW
Trigger: CCACTGGGCACGTTGGTCTTCACTGATAATCCCTCAGTGGTGGTGAGCCATTTTACCCAAGCCCAGGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GTGATGGACAGTCCCCTTCGATCCGTGCACTCCAAGTaGCCTCTCATAGGAGCCCTGGTAATGGTGAAAACT +
Preference number: 6 (lower is better)
Translates to: VMDSPLRSVHSK*PLIGALVMVKT
Trigger: AGTTTTCACCATTACCAGGGCTCCTATGAGAGGTCACTTGGAGTGCACGGATCGAAGGGGACTGTCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GGTGACCACTGGCTTTTTGTTGTCTACGTCACTGATTaGGATCCGGAAAGTTCGGAAGACAGGGTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: GDHWLFVVYVTD*DPESSEDRVPP
Trigger: GGGCGGAACCCTGTCTTCCGAACTTTCCGGATCTCAATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp AAACATAGAAGTCCGAGTGGGTGCCGTCAGTCACGGTaGAGGAGAAGCTGTCTTCCGTGGATTCTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: KHRSPSGCRQSR*RRSCLPWILCH
Trigger: ATGGCACAGAATCCACGGAAGACAGCTTCTCCTTCACCGTGACTGACGGCACCCACTCGGACTTCTATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp CCCCAAAGTAGAAGGCAGGCTCATCATCCCTGTCTGTaGGGATGGTCACATTGGCTCCTGGAAACTTGTCAC +
Preference number: 6 (lower is better)
Translates to: PQSRRQAHHPCL*GWSHWLLETCH
Trigger: GTGACAAGTTTCCAGGAGCCAATGTGACCATCCTCACAGACAGGGATGATGAGCCTGCCTTCTACTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TTTTCTCTCGTTCGTCTTTGTCAAAGCGGATCACGCTaGTGTGGTCCTCGGGCCTGGAGATGTAGTCAGAGT +
Preference number: 6 (lower is better)
Translates to: FSLVRLCQSGSR*CGPRAWRCSQS
Trigger: ACTCTGACTACATCTCCAGGCCCGAGGACCACAGCAGCGTGATCCGCTTTGACAAAGACGAACGAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TCTCTTGTGGAGATGGCAGGGAGCATGCCGTCTATGTaGGGCATAGTGACAGTGAGTTTGATGAGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: SLVEMAGSMPSM*GIVTVSLMRLA
Trigger: TGCCAACCTCATCAAACTCACTGTCACTATGCCGCACATAGACGGCATGCTCCCTGCCATCTCCACAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp ATCACATCCCCTTCTGCAAAAGCCACGTCGCTTTCCTaGCCAAATCCCATGGACCCATCAGACAACCAGAGA +
Preference number: 6 (lower is better)
Translates to: ITSPSAKATSLS*PNPMDPSDNQR
Trigger: TCTCTGGTTGTCTGATGGGTCCATGGGATTTGGGCAGGAAAGCGACGTGGCTTTTGCAGAAGGGGATGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp AGCCGTCATCCCCCGTGCATAAGAACACCTTCTCAATaGTGCAGTAAAAGGAGTCACCGAGGTTCTGGACAG +
Preference number: 6 (lower is better)
Translates to: SRHPPCIRTPSQ*CSKRSHRGSGQ
Trigger: CTGTCCAGAACCTCGGTGACTCCTTTTACTGCAGCATTGAGAAGGTGTTCTTATGCACGGGGGATGACGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TATGTCCTCCAAGTGGAATTGTCCGCCTACATGCAGTaGCCGTCCAGATATTTGCATGTGGCCGTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: YVLQVELSAYMQ*PSRYLHVAVFG
Trigger: CCCAAACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAGGACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCATCCTTCAGGGAGTCCATGTCCTCAGCACTTAGGTaGGTCAGGCTTATCACACTCTTGTCACCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSFRESMSSALR*VRLITLLSPSS
Trigger: GCTGGAAGGTGACAAGAGTGTGATAAGCCTGACCCACCTAAGTGCTGAGGACATGGACTCCCTGAAGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ACCAGGGAGGAATGTGACAGTGGAAACATCGGTATTTaGGCGTTCCTCGAAGTCCATCATCACCTGCGCAGA +
Preference number: 6 (lower is better)
Translates to: TREECDSGNIGI*AFLEVHHHLRR
Trigger: TCTGCGCAGGTGATGATGGACTTCGAGGAACGCCCAAATACCGATGTTTCCACTGTCACATTCCTCCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CATAGTGACAGTGAGTTTGATGAGGTTGGCAAAGTCTaGGTCCTCTGGGCCAGTGTAGCGCAACTTAGCGGA +
Preference number: 6 (lower is better)
Translates to: HSDSEFDEVGKV*VLWASVAQLSG
Trigger: TCCGCTAAGTTGCGCTACACTGGCCCAGAGGACCCAGACTTTGCCAACCTCATCAAACTCACTGTCACTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CTGGATCCCAGACTGGTTAGGGGGATCATGATTGTCTaGGACTCTAAACATGAACTGGTCCATCACCGGCCC +
Preference number: 6 (lower is better)
Translates to: LDPRLVRGIMIV*DSKHELVHHRP
Trigger: GGGCCGGTGATGGACCAGTTCATGTTTAGAGTCCAAGACAATCATGATCCCCCTAACCAGTCTGGGATCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GTTAGATCATCCCTGGGAATGTCGGCATCAGCAGCGTaGAGGATGAGTCTGTTGACCACCAGACTCATGCCT +
Preference number: 6 (lower is better)
Translates to: VRSSLGMSASAA*RMSLLTTRLMP
Trigger: AGGCATGAGTCTGGTGGTCAACAGACTCATCCTCAACGCTGCTGATGCCGACATTCCCAGGGATGATCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TGGCCAGTGGCCAGGGTACGAAGGGTAGAAGCTCCTTaGTTCACCACAATTTGGGGGACACTGTTGTCAACA +
Preference number: 6 (lower is better)
Translates to: WPVARVRRVEAP*FTTIWGTLLST
Trigger: TGTTGACAACAGTGTCCCCCAAATTGTGGTGAACAAAGGAGCTTCTACCCTTCGTACCCTGGCCACTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCATCCCTGGGAATGTCGGCATCAGCAGCGTTGAGGATGAGTCTGTaGACCACCAGACTCATGCCTTCCATCACCATGAATTCCCTCATG +
Preference number: 6 (lower is better)
Translates to: SSLGMSASAALRMSL*TTRLMPSITMNSLM
Trigger: CATGAGGGAATTCATGGTGATGGAAGGCATGAGTCTGGTGGTCAACAGACTCATCCTCAACGCTGCTGATGCCGACATTCCCAGGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp AACCCTAAATGGCCAGTGGCCAGGGTACGAAGGGTAGAAGCTCCTTaGTTCACCACAATTTGGGGGACACTGTTGTCAACAGGTAACACC +
Preference number: 6 (lower is better)
Translates to: NPKWPVARVRRVEAP*FTTIWGTLLSTGNT
Trigger: GGTGTTACCTGTTGACAACAGTGTCCCCCAAATTGTGGTGAACAAAGGAGCTTCTACCCTTCGTACCCTGGCCACTGGCCATTTAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp CATGGTTCCACAAGATGGCAGTGTCGTACACGAATGTaGGTCGGAGCTCTGACTTCAAGTCGAAATGCTGCC +
Preference number: 6 (lower is better)
Translates to: HGSTRWQCRTRM*VGALTSSRNAA
Trigger: GGCAGCATTTCGACTTGAAGTCAGAGCTCCGACTCACATTCGTGTACGACACTGCCATCTTGTGGAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TGCTTTATGTCCTCCAAGTGGAATTGTCCGCCTACATaGAGTGGCCGTCCAGATATTTGCATGTGGCCGTGT +
Preference number: 6 (lower is better)
Translates to: CFMSSKWNCPPT*SGRPDICMWPC
Trigger: ACACGGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAGGACATAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp ATCGACCATGACACGGCCATAAATCACATCCCCTTCTaGAAAAGCCACGTCGCTTTCCTGCCCAAATCCCAT +
Preference number: 6 (lower is better)
Translates to: IDHDTAINHIPF*KSHVAFLPKSH
Trigger: ATGGGATTTGGGCAGGAAAGCGACGTGGCTTTTGCAGAAGGGGATGTGATTTATGGCCGTGTCATGGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CGTCATCCCCCGTGCATAAGAACACCTTCTCAATGCTaGAGTAAAAGGAGTCACCGAGGTTCTGGACAGGAT +
Preference number: 6 (lower is better)
Translates to: RHPPCIRTPSQC*SKRSHRGSGQD
Trigger: ATCCTGTCCAGAACCTCGGTGACTCCTTTTACTGCAGCATTGAGAAGGTGTTCTTATGCACGGGGGATGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGGCGAACTCTAAGCTCCGATCGTCCAAGGCATTACTaGTCCCTAGCAGTTCTTCCACGACCAGAGGTAAAT +
Preference number: 6 (lower is better)
Translates to: RRTLSSDRPRHY*SLAVLPRPEVN
Trigger: ATTTACCTCTGGTCGTGGAAGAACTGCTAGGGACCAGTAATGCCTTGGACGATCGGAGCTTAGAGTTCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp AGCTCACCCACATCTTCTTCAACAGAGTACTCAGACTaGGGAATGAACACGGTTGATTCGTCTCCTGGGTCG +
Preference number: 6 (lower is better)
Translates to: SSPTSSSTEYSD*GMNTVDSSPGS
Trigger: CGACCCAGGAGACGAATCAACCGTGTTCATTCCCCAGTCTGAGTACTCTGTTGAAGAAGATGTGGGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GGTAGCCAGACACAGGTCCAGTGTCCTCTCTGCCTTTaGAGGGATCATCGTATATCAGCAAGGACACAATGT +
Preference number: 6 (lower is better)
Translates to: GSQTQVQCPLCL*RDHRISARTQC
Trigger: ACATTGTGTCCTTGCTGATATACGATGATCCCTCCAAAGGCAGAGAGGACACTGGACCTGTGTCTGGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ACTGTACTGGTAAGGATAGGTCTCTCCAATGACCTCTaGGTTCTTTGTGGCGTTGGTCAGGAAGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: TVLVRIGLSNDL*VLCGVGQEAMV
Trigger: CACCATGGCTTCCTGACCAACGCCACAAAGAACCCAGAGGTCATTGGAGAGACCTATCCTTACCAGTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CACGAAACTCCACTGCTGGACTGGCTGATTGTAGGTTaGTTCACTCCGTATAAGGCGGAGGGAAAATGTGAG +
Preference number: 6 (lower is better)
Translates to: HETPLLDWLIVG*FTPYKAEGKCE
Trigger: CTCACATTTTCCCTCCGCCTTATACGGAGTGAACCAACCTACAATCAGCCAGTCCAGCAGTGGAGTTTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GACAACCAGAGATTCTTCTTAGACAGCAGATACATGTaGGTGTTCAGGCTGAACTCAGTCGCCACGGGATCG +
Preference number: 6 (lower is better)
Translates to: DNQRFFLDSRYM*VFRLNSVATGS
Trigger: CGATCCCGTGGCGACTGAGTTCAGCCTGAACACCCACATGTATCTGCTGTCTAAGAAGAATCTCTGGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GGAATGTCGGCATCAGCAGCGTTGAGGATGAGTCTGTaGACCACCAGACTCATGCCTTCCATCACCATGAAT +
Preference number: 6 (lower is better)
Translates to: GMSASAALRMSL*TTRLMPSITMN
Trigger: ATTCATGGTGATGGAAGGCATGAGTCTGGTGGTCAACAGACTCATCCTCAACGCTGCTGATGCCGACATTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp ATAGTAAACGTTAGATCATCCCTGGGAATGTCGGCATCAGCAGCGTaGAGGATGAGTCTGTTGACCACCAGACTCATGCCTTCCATCACC +
Preference number: 6 (lower is better)
Translates to: IVNVRSSLGMSASAA*RMSLLTTRLMPSIT
Trigger: GGTGATGGAAGGCATGAGTCTGGTGGTCAACAGACTCATCCTCAACGCTGCTGATGCCGACATTCCCAGGGATGATCTAACGTTTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CTGTTCAAGTCACTTGTGCTCAGCAGATCCGTTGTCAGAGTGACTTaGCCACCTTCTTTCAAGGACACGCCCTTACTTACCACATCAGGG +
Preference number: 6 (lower is better)
Translates to: LFKSLVLSRSVVRVT*PPSFKDTPLLTTSG
Trigger: CCCTGATGTGGTAAGTAAGGGCGTGTCCTTGAAAGAAGGTGGCAAAGTCACTCTGACAACGGATCTGCTGAGCACAAGTGACTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CTTTCACTGACCACCAGGTTGTGGATGGTGACCACTGGCTTTTTGTaGTCTACGTCACTGATTGAGATCCGGAAAGTTCGGAAGACAGGG +
Preference number: 6 (lower is better)
Translates to: LSLTTRLWMVTTGFL*STSLIEIRKVRKTG
Trigger: CCCTGTCTTCCGAACTTTCCGGATCTCAATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp TCAAGTCACTTGTGCTCAGCAGATCCGTTGTCAGAGTaGCTTTGCCACCTTCTTTCAAGGACACGCCCTTAC +
Preference number: 6 (lower is better)
Translates to: SSHLCSADPLSE*LCHLLSRTRPY
Trigger: GTAAGGGCGTGTCCTTGAAAGAAGGTGGCAAAGTCACTCTGACAACGGATCTGCTGAGCACAAGTGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp ACTGCTCGGGCCGCACATTGGACCCGGGAGCCAGGCTaGAAGTATATGGAGTCTAATGTAATCATTTTGGAT +
Preference number: 6 (lower is better)
Translates to: TARAAHWTREPG*KYMESNVIILD
Trigger: ATCCAAAATGATTACATTAGACTCCATATACTTTCAGCCTGGCTCCCGGGTCCAATGTGCGGCCCGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp CGTCCAAGGTCATCCAGAATGACCACTCGAACAGTCTaGATGTTGACGCCAGGCGCAAAATCTAAATTGCGA +
Preference number: 6 (lower is better)
Translates to: RPRSSRMTTRTV*MLTPGAKSKLR
Trigger: TCGCAATTTAGATTTTGCGCCTGGCGTCAACATGCAGACTGTTCGAGTGGTCATTCTGGATGACCTTGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CATGGTGGGTCTTTACTTCATTGTAGTCCAGCAGGTTaGAGCATTTGTGATTCCCAACTCTCGTGCCGTCAG +
Preference number: 6 (lower is better)
Translates to: HGGSLLHCSPAG*SICDSQLSCRQ
Trigger: CTGACGGCACGAGAGTTGGGAATCACAAATGCTCCAACCTGCTGGACTACAATGAAGTAAAGACCCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TCCTCTGTGGACACTCTGGACATAGTTAATGTGTCCTaGCCTGAGATCCTTCAGCGTGAAGGCACTTATGGC +
Preference number: 6 (lower is better)
Translates to: SSVDTLDIVNVS*PEILQREGTYG
Trigger: GCCATAAGTGCCTTCACGCTGAAGGATCTCAGGCAAGGACACATTAACTATGTCCAGAGTGTCCACAGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TCACTTGTGCTCAGCAGATCCGTTGTCAGAGTGACTTaGCCACCTTCTTTCAAGGACACGCCCTTACTTACC +
Preference number: 6 (lower is better)
Translates to: SLVLSRSVVRVT*PPSFKDTPLLT
Trigger: GGTAAGTAAGGGCGTGTCCTTGAAAGAAGGTGGCAAAGTCACTCTGACAACGGATCTGCTGAGCACAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp ACCACCAGGTTGTGGATGGTGACCACTGGCTTTTTGTaGTCTACGTCACTGATTGAGATCCGGAAAGTTCGG +
Preference number: 6 (lower is better)
Translates to: TTRLWMVTTGFL*STSLIEIRKVR
Trigger: CCGAACTTTCCGGATCTCAATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp ACTAAGAGAACAGCTTCAGGGTCATCCACTGCCAGTTaGGCGTTAAACAGGACATCTCCAAAGCTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: TKRTASGSSTAS*ALNRTSPKLVA
Trigger: AGCCACCAGCTTTGGAGATGTCCTGTTTAACGCCAAACTGGCAGTGGATGACCCTGAAGCTGTTCTCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp ATTCCAGTAGGAAATTCTGCCATGCTTTATGTCCTCCAAGTGGAATaGTCCGCCTACATGCAGTGGCCGTCCAGATATTTGCATGTGGCC +
Preference number: 6 (lower is better)
Translates to: IPVGNSAMLYVLQVE*SAYMQWPSRYLHVA
Trigger: GGCCACATGCAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAGGACATAAAGCATGGCAGAATTTCCTACTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GAGTCATCAATTACCAAAATACGACACATTTTCTCTCGTTCGTCTTaGTCAAAGCGGATCACGCTGCTGTGGTCCTCGGGCCTGGAGATG +
Preference number: 6 (lower is better)
Translates to: ESSITKIRHIFSRSS*SKRITLLWSSGLEM
Trigger: CATCTCCAGGCCCGAGGACCACAGCAGCGTGATCCGCTTTGACAAAGACGAACGAGAGAAAATGTGTCGTATTTTGGTAATTGATGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp TTCAACAGAGTACTCAGACTGGGGAATGAACACGGTTaGTTCGTCTCCTGGGTCGATGATCTCCACTGTAGT +
Preference number: 6 (lower is better)
Translates to: FNRVLRLGNEHG*FVSWVDDLHCS
Trigger: ACTACAGTGGAGATCATCGACCCAGGAGACGAATCAACCGTGTTCATTCCCCAGTCTGAGTACTCTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GGAAATTCTGCCATGCTTTATGTCCTCCAAGTGGAATaGTCCGCCTACATGCAGTGGCCGTCCAGATATTTG +
Preference number: 6 (lower is better)
Translates to: GNSAMLYVLQVE*SAYMQWPSRYL
Trigger: CAAATATCTGGACGGCCACTGCATGTAGGCGGACAATTCCACTTGGAGGACATAAAGCATGGCAGAATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TCCTCAGCACTTAGGTGGGTCAGGCTTATCACACTCTaGTCACCTTCCAGCACTACAAACTGTTCACCAAGA +
Preference number: 6 (lower is better)
Translates to: SSALRWVRLITL*SPSSTTNCSPR
Trigger: TCTTGGTGAACAGTTTGTAGTGCTGGAAGGTGACAAGAGTGTGATAAGCCTGACCCACCTAAGTGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp ATTACCAAAATACGACACATTTTCTCTCGTTCGTCTTaGTCAAAGCGGATCACGCTGCTGTGGTCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: ITKIRHIFSRSS*SKRITLLWSSG
Trigger: GCCCGAGGACCACAGCAGCGTGATCCGCTTTGACAAAGACGAACGAGAGAAAATGTGTCGTATTTTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GCGCTGATCAGCCATCTGTATCGGGTCAAAGTGTCGTaGATGTTCTCACTGGCACAAATAGAGCCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: ALISHLYRVKVS*MFSLAQIEPVF
Trigger: GAAAACAGGCTCTATTTGTGCCAGTGAGAACATCAACGACACTTTGACCCGATACAGATGGCTGATCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GAGTCCATGTCCTCAGCACTTAGGTGGGTCAGGCTTATCACACTCTaGTCACCTTCCAGCACTACAAACTGTTCACCAAGAGAAATCTCA +
Preference number: 6 (lower is better)
Translates to: ESMSSALRWVRLITL*SPSSTTNCSPREIS
Trigger: TGAGATTTCTCTTGGTGAACAGTTTGTAGTGCTGGAAGGTGACAAGAGTGTGATAAGCCTGACCCACCTAAGTGCTGAGGACATGGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCACTTTCACTGACCACCAGGTTGTGGATGGTGACCACTGGCTTTTaGTTGTCTACGTCACTGATTGAGATCCGGAAAGTTCGGAAGACA +
Preference number: 6 (lower is better)
Translates to: SLSLTTRLWMVTTGF*LSTSLIEIRKVRKT
Trigger: TGTCTTCCGAACTTTCCGGATCTCAATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp CTGAGAGAAAAATGCAGGCTGTCTCTGTCCTCCACTTTGAGTATTTaGCTTGTGATCATGAACCCTAAATGGCCAGTGGCCAGGGTACGA +
Preference number: 6 (lower is better)
Translates to: LREKCRLSLSSTLSI*LVIMNPKWPVARVR
Trigger: TCGTACCCTGGCCACTGGCCATTTAGGGTTCATGATCACAAGCAAAATACTCAAAGTGGAGGACAGAGACAGCCTGCATTTTTCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCAACAGGGATGACCACAATGAGGACCATCTTCTCCACGGAGTGCTaGCCATCTGTCAGTTTAATCACAAAACTGTCCTCTTGTGTCTCA +
Preference number: 6 (lower is better)
Translates to: STGMTTMRTIFSTEC*PSVSLITKLSSCVS
Trigger: TGAGACACAAGAGGACAGTTTTGTGATTAAACTGACAGATGGCAAGCACTCCGTGGAGAAGATGGTCCTCATTGTGGTCATCCCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCAAAGGGGGTGATCAGCTTACTTTCACTTTCACTGACCACCAGGTaGTGGATGGTGACCACTGGCTTTTTGTTGTCTACGTCACTGATT +
Preference number: 6 (lower is better)
Translates to: SKGVISLLSLSLTTR*WMVTTGFLLSTSLI
Trigger: AATCAGTGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGAAAGTGAAAGTAAGCTGATCACCCCCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp ACAAACCTCTGGATCCCAGACTGGTTAGGGGGATCATaGTTGTCTTGGACTCTAAACATGAACTGGTCCATC +
Preference number: 6 (lower is better)
Translates to: TNLWIPDWLGGS*LSWTLNMNWSI
Trigger: GATGGACCAGTTCATGTTTAGAGTCCAAGACAATCATGATCCCCCTAACCAGTCTGGGATCCAGAGGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TCAAAGACTCATCCCCGCTATTCCAGTAGGAAATTCTaGCATGCTTTATGTCCTCCAAGTGGAATTGTCCGC +
Preference number: 6 (lower is better)
Translates to: SKTHPRYSSRKF*HALCPPSGIVR
Trigger: GCGGACAATTCCACTTGGAGGACATAAAGCATGGCAGAATTTCCTACTGGAATAGCGGGGATGAGTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp GTACGAAGGGTAGAAGCTCCTTTGTTCACCACAATTTaGGGGACACTGTTGTCAACAGGTAACACCTGGATT +
Preference number: 6 (lower is better)
Translates to: VRRVEAPLFTTI*GTLLSTGNTWI
Trigger: AATCCAGGTGTTACCTGTTGACAACAGTGTCCCCCAAATTGTGGTGAACAAAGGAGCTTCTACCCTTCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp TCAAAGGAGATCCACGCCCAATTCAGTCGAAAATGCTaGTTGGTTAACCTGTTTCCACCGTCATCTTCCACT +
Preference number: 6 (lower is better)
Translates to: SKEIHAQFSRKC*LVNLFPPSSST
Trigger: AGTGGAAGATGACGGTGGAAACAGGTTAACCAACCAGCATTTTCGACTGAATTGGGCGTGGATCTCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp CTCACTGGCACAAATAGAGCCTGTTTTCTCATAGTCTaGATATTTGGGGTTGCAGGCCGTAATGCAGACAAC +
Preference number: 6 (lower is better)
Translates to: LTGTNRACFLIV*IFGVAGRNADN
Trigger: GTTGTCTGCATTACGGCCTGCAACCCCAAATATCCAGACTATGAGAAAACAGGCTCTATTTGTGCCAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp GTGATCAGCTTACTTTCACTTTCACTGACCACCAGGTaGTGGATGGTGACCACTGGCTTTTTGTTGTCTACG +
Preference number: 6 (lower is better)
Translates to: VISLLSLSLTTR*WMVTTGFLLST
Trigger: CGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGAAAGTGAAAGTAAGCTGATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp AAATGCAGGCTGTCTCTGTCCTCCACTTTGAGTATTTaGCTTGTGATCATGAACCCTAAATGGCCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: KCRLSLSSTLSI*LVIMNPKWPVA
Trigger: GGCCACTGGCCATTTAGGGTTCATGATCACAAGCAAAATACTCAAAGTGGAGGACAGAGACAGCCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp AAGGAGATCCACGCCCAATTCAGTCGAAAATGCTGGTaGGTTAACCTGTTTCCACCGTCATCTTCCACTATG +
Preference number: 6 (lower is better)
Translates to: KEIHAQFSRKCW*VNLFPPSSSTM
Trigger: CATAGTGGAAGATGACGGTGGAAACAGGTTAACCAACCAGCATTTTCGACTGAATTGGGCGTGGATCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp AGGTCATCCAGAATGACCACTCGAACAGTCTGCATGTaGACGCCAGGCGCAAAATCTAAATTGCGACTGATT +
Preference number: 6 (lower is better)
Translates to: RSSRMTTRTVCM*TPGAKSKLRLI
Trigger: AATCAGTCGCAATTTAGATTTTGCGCCTGGCGTCAACATGCAGACTGTTCGAGTGGTCATTCTGGATGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CGCCCGTCATTCTCGTTGCAAGTGTACACTCTCTCTTaGAATTGCATTTTAGGCAAGTCTGAGGCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: RPSFSLQVYTLS*NCILGKSEAES
Trigger: TGACTCTGCCTCAGACTTGCCTAAAATGCAATTCAAAGAGAGAGTGTACACTTGCAACGAGAATGACGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TTTGGCGTTAAACAGGACATCTCCAAAGCTGGTGGCTaGTGTCTCTGGCTGAGCCTTATCCACGATTTTGAA +
Preference number: 6 (lower is better)
Translates to: FGVKQDISKAGG*CLWLSLIHDFE
Trigger: TTCAAAATCGTGGATAAGGCTCAGCCAGAGACACAAGCCACCAGCTTTGGAGATGTCCTGTTTAACGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp ACAATGAACCTGAGAGAAAAATGCAGGCTGTCTCTGTCCTCCACTTaGAGTATTTTGCTTGTGATCATGAACCCTAAATGGCCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: TMNLREKCRLSLSST*SILLVIMNPKWPVA
Trigger: GGCCACTGGCCATTTAGGGTTCATGATCACAAGCAAAATACTCAAAGTGGAGGACAGAGACAGCCTGCATTTTTCTCTCAGGTTCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp AAGCTTGAGAAGGGTGGCAACAGGACAAAAACCAGCTaGGAGTCATCTGAATCTATATCGGTTGCACTGAGA +
Preference number: 6 (lower is better)
Translates to: KLEKGGNRTKTS*ESSESISVALR
Trigger: TCTCAGTGCAACCGATATAGATTCAGATGACTCTCAGCTGGTTTTTGTCCTGTTGCCACCCTTCTCAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GAGAAATGTTCTCTACATAGCCTGAGGTTGGCTGAATaGCTATTGTGCACAAGAGGTCATCCTTCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: EKCSLHSLRLAE*LLCTRGHPSGS
Trigger: ACTCCCTGAAGGATGACCTCTTGTGCACAATAGTCATTCAGCCAACCTCAGGCTATGTAGAGAACATTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp AGGACATCTCCAAAGCTGGTGGCTTGTGTCTCTGGCTaGGCCTTATCCACGATTTTGAATCTATGTAAGAGT +
Preference number: 6 (lower is better)
Translates to: RTSPKLVACVSG*ALSTILNLCKS
Trigger: ACTCTTACATAGATTCAAAATCGTGGATAAGGCTCAGCCAGAGACACAAGCCACCAGCTTTGGAGATGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp GGTGTTGAGTCTACTTTAAAACCATCGGATCCAGGCTaGTTCACTAAGAGAACAGCTTCAGGGTCATCCACT +
Preference number: 6 (lower is better)
Translates to: GVESTLKPSDPG*FTKRTASGSST
Trigger: AGTGGATGACCCTGAAGCTGTTCTCTTAGTGAATCAGCCTGGATCCGATGGTTTTAAAGTAGACTCAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp ATTGTGTGTATGTACCACTCTCGGCCCAAGGCAACCTaGAAGAGTGGTGTTGAGTCTACTTTAAAACCATCG +
Preference number: 6 (lower is better)
Translates to: IVCMYHSRPKAT*KSGVESTLKPS
Trigger: CGATGGTTTTAAAGTAGACTCAACACCACTCTTTCAGGTTGCCTTGGGCCGAGAGTGGTACATACACACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp TTTTCAAAGGAGATCCACGCCCAATTCAGTCGAAAATaGTGGTTGGTTAACCTGTTTCCACCGTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: FSKEIHAQFSRK*WLVNLFPPSSS
Trigger: GGAAGATGACGGTGGAAACAGGTTAACCAACCAGCATTTTCGACTGAATTGGGCGTGGATCTCCTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CCA 72 bp ATCAGCTTACTTTCACTTTCACTGACCACCAGGTTGTaGATGGTGACCACTGGCTTTTTGTTGTCTACGTCA +
Preference number: 6 (lower is better)
Translates to: ISLLSLSLTTRL*MVTTGFLLSTS
Trigger: TGACGTAGACAACAAAAAGCCAGTGGTCACCATCCACAACCTGGTGGTCAGTGAAAGTGAAAGTAAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp CAGGTCTCGAATACCTTCTTGCCCAAAGTGGACATATaGAATCAAGTTCCTGTCCACTTCGTCCTGGGTAAA +
Preference number: 6 (lower is better)
Translates to: QVSNTFLPKVDI*NQVPVHFVLGK
Trigger: TTTACCCAGGACGAAGTGGACAGGAACTTGATTCAATATGTCCACTTTGGGCAAGAAGGTATTCGAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCCATCACCATGAATTCCCTCATGAACATTTCTGGCTGCTCGTCATaGGTAGGAATGATGACAATGGGGAATATCTGTCTCTCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: SITMNSLMNISGCSS*VGMMTMGNICLSEK
Trigger: CTTCTCTGAGAGACAGATATTCCCCATTGTCATCATTCCTACCAATGACGAGCAGCCAGAAATGTTCATGAGGGAATTCATGGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS GCA 72 bp GGACACAATGTGAGGGACAGAAGGAAAGGTGACATCTaGCATGCTGTGGATTTCTTCTATATATACAATGGC +
Preference number: 6 (lower is better)
Translates to: GHNVRDRRKGDI*HAVDFFYIYNG
Trigger: GCCATTGTATATATAGAAGAAATCCACAGCATGGCAGATGTCACCTTTCCTTCTGTCCCTCACATTGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TCTTTTTCAAAGGAGATCCACGCCCAATTCAGTCGAAAATGCTGGTaGGTTAACCTGTTTCCACCGTCATCTTCCACTATGAAATGGAAC +
Preference number: 6 (lower is better)
Translates to: SFSKEIHAQFSRKCW*VNLFPPSSSTMKWN
Trigger: GTTCCATTTCATAGTGGAAGATGACGGTGGAAACAGGTTAACCAACCAGCATTTTCGACTGAATTGGGCGTGGATCTCCTTTGAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp ATGAATTCCCTCATGAACATTTCTGGCTGCTCGTCATaGGTAGGAATGATGACAATGGGGAATATCTGTCTC +
Preference number: 6 (lower is better)
Translates to: MNSLMNISGCSS*VGMMTMGNICL
Trigger: GAGACAGATATTCCCCATTGTCATCATTCCTACCAATGACGAGCAGCCAGAAATGTTCATGAGGGAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp GAATTTAATCAGGTCTCGAATACCTTCTTGCCCAAAGTGGACATATaGAATCAAGTTCCTGTCCACTTCGTCCTGGGTAAAATTCATGCC +
Preference number: 6 (lower is better)
Translates to: EFNQVSNTFLPKVDI*NQVPVHFVLGKIHA
Trigger: GGCATGAATTTTACCCAGGACGAAGTGGACAGGAACTTGATTCAATATGTCCACTTTGGGCAAGAAGGTATTCGAGACCTGATTAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS TCA 72 bp CTGTTGTCAACAGGTAACACCTGGATTTTCATCACTTaGGGTCTCCTGGTTTCAAACACTGTATCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: LLSTGNTWIFIT*GLLVSNTVSGK
Trigger: TTTTCCTGATACAGTGTTTGAAACCAGGAGACCTCAAGTGATGAAAATCCAGGTGTTACCTGTTGACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp TTGTTGATAACTTTGGTTTCCCCAATTTCTATTTCTAGCCCATTATaGATGGTCATTCTGGGTGTCTCGTCATCAACAGGGATGACCACA +
Preference number: 6 (lower is better)
Translates to: LLITLVSPISISSPL*MVILGVSSSTGMTT
Trigger: TGTGGTCATCCCTGTTGATGACGAGACACCCAGAATGACCATCAATAATGGGCTAGAAATAGAAATTGGGGAAACCAAAGTTATCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 90 bp ACCAGTGATTTGTCATCAGAGTCTAGATCGGTTGCCATTAGGACTTaGTTGTTGATAACTTTGGTTTCCCCAATTTCTATTTCTAGCCCA +
Preference number: 6 (lower is better)
Translates to: TSDLSSESRSVAIRT*LLITLVSPISISSP
Trigger: TGGGCTAGAAATAGAAATTGGGGAAACCAAAGTTATCAACAACAAAGTCCTAATGGCAACCGATCTAGACTCTGATGACAAATCACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6
CDS CAA 72 bp TTGTCATCAGAGTCTAGATCGGTTGCCATTAGGACTTaGTTGTTGATAACTTTGGTTTCCCCAATTTCTATT +
Preference number: 6 (lower is better)
Translates to: LSSESRSVAIRT*LLITLVSPISI
Trigger: AATAGAAATTGGGGAAACCAAAGTTATCAACAACAAAGTCCTAATGGCAACCGATCTAGACTCTGATGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091137.6