Pregenerated sensors for FRAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047604Ensembl transcript IDs: ENSMUST00000059231.4
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGACGACAGCTCCTGCTCCGCACAGTCCCGGGCAAGACACTGTTaGATCAGCGTAGCGGCGTCCTCTTCCTCCTCCAGGGATCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: MDDSSCSAQSRARHC*ISVAASSSSSRDPL Trigger: CAGGGGATCCCTGGAGGAGGAAGAGGACGCCGCTACGCTGATCCAACAGTGTCTTGCCCGGGACTGTGCGGAGCAGGAGCTGTCGTCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR GCA 90 bp | GTCCTCGGGAGACTCCACGCGGTGGCAAAGGGACACTCCGGTCTGTaGTTGGCTCCAGAAAAAGACACTGGGGTGAGCGCTCCCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: VLGRLHAVAKGHSGL*LAPEKDTGVSAPKN Trigger: ATTCTTGGGAGCGCTCACCCCAGTGTCTTTTTCTGGAGCCAAGCACAGACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 90 bp | ACAAGGATGGCCATGTCGGCCGTGTCCTCGGGAGACTCCACGCGGTaGCAAAGGGACACTCCGGTCTGTGCTTGGCTCCAGAAAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: TRMAMSAVSSGDSTR*QRDTPVCAWLQKKT Trigger: TGTCTTTTTCTGGAGCCAAGCACAGACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAGGACACGGCCGACATGGCCATCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 90 bp | AGTAGCTGCCACAGTTCAACCGGTAGATCCCAGGTCCTCGGCTGCTaGTGCTACTCAGTAGAGTCCGTTTTCTCTAACAGCCTCTCGCGG | + |
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Preference number: 1 (lower is better) Translates to: SSCHSSTGRSQVLGC*CYSVESVFSNSLSR Trigger: CCGCGAGAGGCTGTTAGAGAAAACGGACTCTACTGAGTAGCACCAGCAGCCGAGGACCTGGGATCTACCGGTTGAACTGTGGCAGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 90 bp | GGCAAAGGGACACTCCGGTCTGTGCTTGGCTCCAGAAAAAGACACTaGGGTGAGCGCTCCCAAGAATCCCACAACACTCCACTCTACCAA | + |
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Preference number: 1 (lower is better) Translates to: GKGTLRSVLGSRKRH*GERSQESHNTPLYQ Trigger: TTGGTAGAGTGGAGTGTTGTGGGATTCTTGGGAGCGCTCACCCCAGTGTCTTTTTCTGGAGCCAAGCACAGACCGGAGTGTCCCTTTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR GCA 90 bp | AAGCACACGATAAGGGCTAAGTCAGGTCCAAGTGGATTAAGTAGCTaGCACAGTTCAACCGGTAGATCCCAGGTCCTCGGCTGCTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: KHTIRAKSGPSGLSS*HSSTGRSQVLGCWC Trigger: GCACCAGCAGCCGAGGACCTGGGATCTACCGGTTGAACTGTGGCAGCTACTTAATCCACTTGGACCTGACTTAGCCCTTATCGTGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR GCA 90 bp | TTAAGTAGCTGCCACAGTTCAACCGGTAGATCCCAGGTCCTCGGCTaGTGGTGCTACTCAGTAGAGTCCGTTTTCTCTAACAGCCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: LSSCHSSTGRSQVLG*WCYSVESVFSNSLS Trigger: CGAGAGGCTGTTAGAGAAAACGGACTCTACTGAGTAGCACCAGCAGCCGAGGACCTGGGATCTACCGGTTGAACTGTGGCAGCTACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CAA 90 bp | GATGGACGACAGCTCCTGCTCCGCACAGTCCCGGGCAAGACACTGTaGGATCAGCGTAGCGGCGTCCTCTTCCTCCTCCAGGGATCCCCT | + |
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Preference number: 2 (lower is better) Translates to: DGRQLLLRTVPGKTL*DQRSGVLFLLQGSP Trigger: AGGGGATCCCTGGAGGAGGAAGAGGACGCCGCTACGCTGATCCAACAGTGTCTTGCCCGGGACTGTGCGGAGCAGGAGCTGTCGTCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CAA 90 bp | CTCGGGAGACTCCACGCGGTGGCAAAGGGACACTCCGGTCTGTGCTaGGCTCCAGAAAAAGACACTGGGGTGAGCGCTCCCAAGAATCCC | + |
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Preference number: 2 (lower is better) Translates to: LGRLHAVAKGHSGLC*APEKDTGVSAPKNP Trigger: GGGATTCTTGGGAGCGCTCACCCCAGTGTCTTTTTCTGGAGCCAAGCACAGACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR-3UTR GCA 90 bp | TGTCGGCCGTGTCCTCGGGAGACTCCACGCGGTGGCAAAGGGACACTCCGGTCTCAAGGTCGAATCAATTaGATGTCCCCATTTAAACTC | + |
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Preference number: 2 (lower is better) Translates to: CRPCPRETPRGGKGTLRSQGRIN*MSPFKL Trigger: GAGTTTAAATGGGGACATGCAATTGATTCGACCTTG...AGACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAGGACACGGCCGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR-3UTR GCA 90 bp | ATCAATTGCATGTCCCCATTTAAACTCATCTCTCCCCACCTTCAAGAATTCACCTCCCAGGTCCTCGGCTaGTGGTGCTACTCAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: INCMSPFKLISPHLQEFTSQVLG*WCYSVE Trigger: CTCTACTGAGTAGCACCAGCAGCCGAGGACCTGGGA...GGTGAATTCTTGAAGGTGGGGAGAGATGAGTTTAAATGGGGACATGCAATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 72 bp | GCCATGTCGGCCGTGTCCTCGGGAGACTCCACGCGGTaGCAAAGGGACACTCCGGTCTGTGCTTGGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: AMSAVSSGDSTR*QRDTPVCAWLQ Trigger: CTGGAGCCAAGCACAGACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAGGACACGGCCGACATGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 72 bp | AGCTCCTGCTCCGCACAGTCCCGGGCAAGACACTGTTaGATCAGCGTAGCGGCGTCCTCTTCCTCCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SSCSAQSRARHC*ISVAASSSSSR Trigger: CCTGGAGGAGGAAGAGGACGCCGCTACGCTGATCCAACAGTGTCTTGCCCGGGACTGTGCGGAGCAGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 72 bp | ACACTCCGGTCTGTGCTTGGCTCCAGAAAAAGACACTaGGGTGAGCGCTCCCAAGAATCCCACAACACTCCA | + |
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Preference number: 3 (lower is better) Translates to: TLRSVLGSRKRH*GERSQESHNTP Trigger: TGGAGTGTTGTGGGATTCTTGGGAGCGCTCACCCCAGTGTCTTTTTCTGGAGCCAAGCACAGACCGGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR GCA 72 bp | ACTGACAGGTTTAGCAGGAGAGGCGCCCTCCAACTCTaGAGAGGGTCAAAAGAGCAGAAAAGTGTGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: TDRFSRRGALQL*RGSKEQKSVPT Trigger: AGTGGGCACACTTTTCTGCTCTTTTGACCCTCTGCAGAGTTGGAGGGCGCCTCTCCTGCTAAACCTGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGCGCCCTCCAACTCTGCAGAGGGTCAAAAGAGCAGAAAAGTGTGCCCACAGGGGAAAGCAAGCGTaGTCAACCCACCAACATAAA | + |
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Preference number: 3 (lower is better) Translates to: ERRPPTLQRVKRAEKCAHRGKQA*STHQHK Trigger: TTTATGTTGGTGGGTTGACAACGCTTGCTTTCCCCT...GTGGGCACACTTTTCTGCTCTTTTGACCCTCTGCAGAGTTGGAGGGCGCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR GCA 72 bp | ATAAGGGCTAAGTCAGGTCCAAGTGGATTAAGTAGCTaGCACAGTTCAACCGGTAGATCCCAGGTCCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: IRAKSGPSGLSS*HSSTGRSQVLG Trigger: GCCGAGGACCTGGGATCTACCGGTTGAACTGTGGCAGCTACTTAATCCACTTGGACCTGACTTAGCCCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR-3UTR CAA 90 bp | TCCGGTCTGTGCTTGGCTCCAGAAAAAGACACTGGGGTGAGCGCTCCCAAGAATTCTACCAACCTGACCTaGAGTTCAAGTTGGCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SGLCLAPEKDTGVSAPKNSTNLT*SSSWQG Trigger: ACCTTGCCAACTTGAACTCAAGGTCAGGTTGGTAGA...ATTCTTGGGAGCGCTCACCCCAGTGTCTTTTTCTGGAGCCAAGCACAGACCGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGCGCCCTCCAACTCTGCAGAGGGTCAAAAGAGCAGAAAAGTGTGCCCACTTGGTTTTTCAAGTATaGTTAGAAGCCCTCCCGATT | + |
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Preference number: 3 (lower is better) Translates to: ERRPPTLQRVKRAEKCAHLVFQV*LEALPI Trigger: AATCGGGAGGGCTTCTAACAATACTTGAAAAACCAA...GTGGGCACACTTTTCTGCTCTTTTGACCCTCTGCAGAGTTGGAGGGCGCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR TCA 72 bp | AACACAATGGCCGCAGGGAGATCAGGAGGTTGCTTATaGCCATTTCTGAGAAAGCTGGAGCTATGGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: NTMAAGRSGGCL*PFLRKLELWPK Trigger: CTTTGGCCATAGCTCCAGCTTTCTCAGAAATGGTCATAAGCAACCTCCTGATCTCCCTGCGGCCATTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CCA 72 bp | ACCATTTCTGAGAAAGCTGGAGCTATGGCCAAAGAGTaGCCTAGCAGAAGTAGTTCTGGAAAAGCAAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TISEKAGAMAKE*PSRSSSGKAKH Trigger: GTGCTTTGCTTTTCCAGAACTACTTCTGCTAGGCCACTCTTTGGCCATAGCTCCAGCTTTCTCAGAAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR GCA 72 bp | CTGACCTTGAGTTCAAGTTGGCAAGGTCGAATCAATTaGATGTCCCCATTTAAACTCATCTCTCCCCACCTT | + |
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Preference number: 3 (lower is better) Translates to: LTLSSSWQGRIN*MSPFKLISPHL Trigger: AAGGTGGGGAGAGATGAGTTTAAATGGGGACATGCAATTGATTCGACCTTGCCAACTTGAACTCAAGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| CDS-3UTR TCA 90 bp | TGTCGGCCGTGTCCTCGGGAGACTCCACGCGGTGGCAAAGGGACACTCCGGTCTGTCCCCGGTCTCTGCTaGCCCCGTCGGCCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CRPCPRETPRGGKGTLRSVPGLC*PRRPQQ Trigger: CTGCTGCGGCCGACGGGGTCAGCAGAGACCGGGGAC...AGACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAGGACACGGCCGACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| CDS-3UTR GCA 90 bp | ATGTCGGCCGTGTCCTCGGGAGACTCCACGCGGTGGCAAAGGGACACTCCGGTCGAGGCCGGGCGATCGTaGGCCGTGTCCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MSAVSSGDSTRWQRDTPVEAGRS*AVSSCS Trigger: GCTGCAGCTGGACACGGCGCACGATCGCCCGGCCTC...GACCGGAGTGTCCCTTTGCCACCGCGTGGAGTCTCCCGAGGACACGGCCGACAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CAA 72 bp | CAGCTCCTGCTCCGCACAGTCCCGGGCAAGACACTGTaGGATCAGCGTAGCGGCGTCCTCTTCCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QLLLRTVPGKTL*DQRSGVLFLLQ Trigger: CTGGAGGAGGAAGAGGACGCCGCTACGCTGATCCAACAGTGTCTTGCCCGGGACTGTGCGGAGCAGGAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| CDS-3UTR TCA 90 bp | GGATTAAGTAGCTGCCACAGTTCAACCGGTAGATCCCAGGTCCTCGGCTGCTGGCGCTGCTGGATTCGGTaGGAAGCCACGGAGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLSSCHSSTGRSQVLGCWRCWIR*EATEPG Trigger: CCCCGGCTCCGTGGCTTCTCACCGAATCCAGCAGCG...CCAGCAGCCGAGGACCTGGGATCTACCGGTTGAACTGTGGCAGCTACTTAATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CAA 72 bp | AAGAATCCCACAACACTCCACTCTACCAACCTGACCTaGAGTTCAAGTTGGCAAGGTCGAATCAATTGCATG | + |
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Preference number: 4 (lower is better) Translates to: KNPTTLHSTNLT*SSSWQGRINCM Trigger: CATGCAATTGATTCGACCTTGCCAACTTGAACTCAAGGTCAGGTTGGTAGAGTGGAGTGTTGTGGGATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| 3UTR CAA 72 bp | CTTCATAATCACAAATTAAGCAGGGGAAAGCAAGCGTaGTCAACCCACCAACATAAATCTGCCAACTTATGT | + |
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Preference number: 4 (lower is better) Translates to: LHNHKLSRGKQA*STHQHKSANLC Trigger: ACATAAGTTGGCAGATTTATGTTGGTGGGTTGACAACGCTTGCTTTCCCCTGCTTAATTTGTGATTATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| CDS GCA 90 bp | CGACTGCTGCAGCAGGAGGAAGCTGTCGTCGTCCTCCTCCCCCTCTaGCTCGTCGCCGGCTTCCTCCTCCTCCTCTCTCCGGCAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: RLLQQEEAVVVLLPL*LVAGFLLLLSPARH Trigger: ATGCCTTGCCGGAGAGAGGAGGAGGAGGAAGCCGGCGACGAGGCAGAGGGGGAGGAGGACGACGACAGCTTCCTCCTGCTGCAGCAGTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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| CDS TCA 72 bp | GCTCCGCCTGCTGTCCACCGCCGCTGCTGGATTCGGTaGGAAGCCACGGAGCCGGGGAGCCACCCTCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: APPAVHRRCWIR*EATEPGSHPRR Trigger: GCGGCGAGGGTGGCTCCCCGGCTCCGTGGCTTCTCACCGAATCCAGCAGCGGCGGTGGACAGCAGGCGGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059231.4 |
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