Pregenerated sensors for FPR2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052270

Ensembl transcript IDs: ENSMUST00000064068.5, ENSMUST00000149944.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	TATAGGACACAGCATAAGGTAAGGAAGGCAGAAGTGGAATGGGACTaGAGTGGAATGAAAACCATCCCTTATCACAGACTTCATGGGGCC	+
Preference number: 1 (lower is better) Translates to: YRTQHKVRKAEVEWD*SGMKTIPYHRLHGA Trigger: GGCCCCATGAAGTCTGTGATAAGGGATGGTTTTCATTCCACTTCAGTCCCATTCCACTTCTGCCTTCCTTACCTTATGCTGTGTCCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR-3UTR TCA 90 bp	CCATCCCTTATCACAGACTTCATGGGGCCTTTAACTCAATGTCTGCAGGAGGTGAAAAGGGCCACAAGCTaGAAGGGAAACCAGCAGATA	+
Preference number: 2 (lower is better) Translates to: PSLITDFMGPLTQCLQEVKRATS*KGNQQI Trigger: TATCTGCTGGTTTCCCTTTCAGCTTGTGGCCCTTTT...CACCTCCTGCAGACATTGAGTTAAAGGCCCCATGAAGTCTGTGATAAGGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR-3UTR TCA 90 bp	ACTGGTTTGACCAGAATCCTCACTCAGGGCTCTCTCAAGACTATAAGGCAGGGAGGGACTGAAGTGGAATaGAAACCATCCCTTATCACA	+
Preference number: 2 (lower is better) Translates to: TGLTRILTQGSLKTIRQGGTEVE*KPSLIT Trigger: TGTGATAAGGGATGGTTTTCATTCCACTTCAGTCCC...TCCCTGCCTTATAGTCTTGAGAGAGCCCTGAGTGAGGATTCTGGTCAAACCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR-3UTR CCA 90 bp	ATGGGACTGAAGTGGAATGAAAACCATCCCTTATCACAGACTTCATGGGGCCTTGGAATGGGACTGAAGTaGAATGAAAACCATCCCTTA	+
Preference number: 2 (lower is better) Translates to: MGLKWNENHPLSQTSWGLGMGLK*NENHPL Trigger: TAAGGGATGGTTTTCATTCCACTTCAGTCCCATTCC...AAGGCCCCATGAAGTCTGTGATAAGGGATGGTTTTCATTCCACTTCAGTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR-3UTR TCA 90 bp	ATAAGGCAGGGAATGAATAAATCTCTCACGAAAGTCCTGGCCCATGAAAACATAATTGAAGTAAGCCAATaGGCTTGTTGGGTTAACAAA	+
Preference number: 2 (lower is better) Translates to: IRQGMNKSLTKVLAHENIIEVSQ*ACWVNK Trigger: TTTGTTAACCCAACAAGCTCATTGGCTTACTTCAAT...TATGTTTTCATGGGCCAGGACTTTCGTGAGAGATTTATTCATTCCCTGCCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR TCA 72 bp	GGAGGTGAAGTAGAACTGGTGCTTGAATCACTGGTTTaGCCAGAATCCTCACTCAGGGCTCTCTCAAGACTA	+
Preference number: 3 (lower is better) Translates to: GGEVELVLESLV*PESSLRALSRL Trigger: TAGTCTTGAGAGAGCCCTGAGTGAGGATTCTGGTCAAACCAGTGATTCAAGCACCAGTTCTACTTCACCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR TCA 72 bp	CAGCATAAGGTAAGGAAGGCAGAAGTGGAATGGGACTaGAGTGGAATGAAAACCATCCCTTATCACAGACTT	+
Preference number: 3 (lower is better) Translates to: QHKVRKAEVEWD*SGMKTIPYHRL Trigger: AAGTCTGTGATAAGGGATGGTTTTCATTCCACTTCAGTCCCATTCCACTTCTGCCTTCCTTACCTTATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
3UTR-3UTR CAA 90 bp	ATAAGGCAGGGAATGAATAAATCTCTCACGAAAGTCCTGGCCCATGAAAACATAACAAGGTTTCTTCTGTaGATCTTGACAGCAATGAGT	+
Preference number: 3 (lower is better) Translates to: IRQGMNKSLTKVLAHENITRFLL*ILTAMS Trigger: ACTCATTGCTGTCAAGATCAACAGAAGAAACCTTGT...TATGTTTTCATGGGCCAGGACTTTCGTGAGAGATTTATTCATTCCCTGCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
CDS-3UTR TCA 90 bp	TCCCTTATCACAGACTTCATGGGGCCTTTAACTCAATGTCTGCAGGAGGTGAAGCCCAGGATCCAAAGTTaGATGTACAATACACATCTC	+
Preference number: 4 (lower is better) Translates to: SLITDFMGPLTQCLQEVKPRIQS*MYNTHL Trigger: GAGATGTGTATTGTACATTCAACTTTGGATCCTGGG...CTTCACCTCCTGCAGACATTGAGTTAAAGGCCCCATGAAGTCTGTGATAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
CDS TCA 90 bp	ATTGCCCAGCACACCAAGGAAGAAAGTGATGGAGACAACCACCATTaGGAGGATCCACAGAACTCTGGAGATGGTAGAATCATAAACCAC	+
Preference number: 5 (lower is better) Translates to: IAQHTKEESDGDNHH*EDPQNSGDGRIINH Trigger: GTGGTTTATGATTCTACCATCTCCAGAGTTCTGTGGATCCTCTCAATGGTGGTTGTCTCCATCACTTTCTTCCTTGGTGTGCTGGGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064068.5
CDS TCA 90 bp	GATCCAAAGTTGAATGTACAATACACATCTCCTCCAGGAATTCATTaGGAGGATCCACAGAACTCTGGAGATGGTAGAATCATAAACCAC	+
Preference number: 5 (lower is better) Translates to: DPKLNVQYTSPPGIH*EDPQNSGDGRIINH Trigger: GTGGTTTATGATTCTACCATCTCCAGAGTTCTGTGGATCCTCTCAATGAATTCCTGGAGGAGATGTGTATTGTACATTCAACTTTGGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
CDS-3UTR CAA 90 bp	ATAAGGCAGGGAATGAATAAATCTCTCACGAAAGTCCTGGCCCATGAAAACATAGCCCAGGATCCAAAGTaGAATGTACAATACACATCT	+
Preference number: 5 (lower is better) Translates to: IRQGMNKSLTKVLAHENIAQDPK*NVQYTS Trigger: AGATGTGTATTGTACATTCAACTTTGGATCCTGGGC...TATGTTTTCATGGGCCAGGACTTTCGTGAGAGATTTATTCATTCCCTGCCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
CDS TCA 72 bp	CACACCAAGGAAGAAAGTGATGGAGACAACCACCATTaGGAGGATCCACAGAACTCTGGAGATGGTAGAATC	+
Preference number: 6 (lower is better) Translates to: HTKEESDGDNHH*EDPQNSGDGRI Trigger: GATTCTACCATCTCCAGAGTTCTGTGGATCCTCTCAATGGTGGTTGTCTCCATCACTTTCTTCCTTGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064068.5
CDS TCA 72 bp	AACTCTGGAGATGGTAGAATCATAAACCACCACTTCTaGTCCATTCAGATGGATGGAGTAGTTGGATTCCAT	+
Preference number: 6 (lower is better) Translates to: NSGDGRIINHHF*SIQMDGVVGFH Trigger: ATGGAATCCAACTACTCCATCCATCTGAATGGATCAGAAGTGGTGGTTTATGATTCTACCATCTCCAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064068.5 ENSMUST00000149944.2
CDS TCA 72 bp	TTGAATGTACAATACACATCTCCTCCAGGAATTCATTaGGAGGATCCACAGAACTCTGGAGATGGTAGAATC	+
Preference number: 6 (lower is better) Translates to: LNVQYTSPPGIH*EDPQNSGDGRI Trigger: GATTCTACCATCTCCAGAGTTCTGTGGATCCTCTCAATGAATTCCTGGAGGAGATGTGTATTGTACATTCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149944.2
CDS CAA 72 bp	AAAAGTGATAGCTGTGTTCAACTTTTCTTCATCAGTTaGAGCCCAGGATCCAAAGTTGAATGTACAATACAC	+
Preference number: 6 (lower is better) Translates to: KSDSCVQLFFIS*SPGSKVECTIH Trigger: GTGTATTGTACATTCAACTTTGGATCCTGGGCTCAAACTGATGAAGAAAAGTTGAACACAGCTATCACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064068.5