Pregenerated sensors for FPGT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053870Ensembl transcript IDs: ENSMUST00000066568.6
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTaGGTAGTTCTTCAGATTGCCTATTTGAATTTCCTCTCTTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TRNSTHFISLQLFMI*VVLQIAYLNFLSLG Trigger: GCCCAAAGAGAGGAAATTCAAATAGGCAATCTGAAGAACTACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTCTCACTATGAGAAGTTaGGCAATACAATCCTCCATA | + |
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Preference number: 2 (lower is better) Translates to: VLASMGAAGKWCTCIHAGLTMRS*AIQSSI Trigger: TATGGAGGATTGTATTGCTCAACTTCTCATAGTGAG...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGGTGCCGCAGGCAAGTaGTGCACATGCATACATGCA | + |
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Preference number: 2 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSGAAGK*CTCIHA Trigger: TGCATGTATGCATGTGCACCACTTGCCTGCGGCACC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR TCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTCCTCAAAGGATTGTTTaGGCCCACAAAAGGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVPQRIV*AHKRSQ Trigger: TTGGGACCTTTTGTGGGCTCAAACAATCCTTTGAGG...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTACAGTGTCCCATAAATaGATCTTTACCAAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSTVSHK*IFTKEH Trigger: GTGCTCTTTGGTAAAGATCCATTTATGGGACACTGT...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR CCA 72 bp | ACAGCTGTTCTAGCCTCTATGGGTGCCGCAGGCAAGTaGTGCACATGCATACATGCAGGTAACACATTTATA | + |
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Preference number: 3 (lower is better) Translates to: TAVLASMGAAGK*CTCIHAGNTFI Trigger: TATAAATGTGTTACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAACAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR TCA 72 bp | GGGCCTATTGTTTGTTCACAGCATCACTACCACCAATaGTGCAAGGCAAATGTCCACTGTCAAGTTAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GPIVCSQHHYHQ*CKANVHCQVKR Trigger: TCTCTTAACTTGACAGTGGACATTTGCCTTGCATCATTGGTGGTAGTGATGCTGTGAACAAACAATAGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTTTACCCCTCAAAGGATaGTTTGAGCCCACAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVLPLKG*FEPTKG Trigger: ACCTTTTGTGGGCTCAAACAATCCTTTGAGGGGTAA...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTCTCTCTTTGGGCCTATaGTTTGTTCACAGCATCACT | + |
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Preference number: 3 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSLSLGL*FVHSIT Trigger: AGTGATGCTGTGAACAAACAATAGGCCCAAAGAGAG...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTAGCAGAAGTGGTCAGTaGTACCATTCTCATTACCAA | + |
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Preference number: 3 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSSRSGQ*YHSHYQ Trigger: TTGGTAATGAGAATGGTACAACTGACCACTTCTGCT...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTATGTTTTGTTACGTGTaGTCTCACTATGAGAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVMFCYV*SHYEKL Trigger: CAACTTCTCATAGTGAGACAACACGTAACAAAACAT...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTTACTTTTATATCATTTaGGCAAGACCAATGAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSYFYII*ARPMRH Trigger: GTGCCTCATTGGTCTTGCCAAAATGATATAAAAGTA...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR TCA 72 bp | TCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTaGGTAGTTCTTCAGATTGCCTATTTGAATTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: STHFISLQLFMI*VVLQIAYLNFL Trigger: GAGGAAATTCAAATAGGCAATCTGAAGAACTACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| 3UTR CCA 72 bp | ATAAATGGATCTTTACCAAAGAGCACAATTGTAAGATaGTGTAAACATCTAAAACAGCCGACCTTTCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: INGSLPKSTIVR*CKHLKQPTFPD Trigger: GTCAGGAAAGGTCGGCTGTTTTAGATGTTTACACCATCTTACAATTGTGCTCTTTGGTAAAGATCCATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTTCCAGGCCTCATGTTTaGGGGGAAATCCACGTACAT | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGSRPHV*GEIHVH Trigger: ATGTACGTGGATTTCCCCTCAAACATGAGGCCTGGA...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTAACAGACAGGGAAAATaGATGCAGTCCACAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGNRQGK*MQSTGS Trigger: TGAGCCTGTGGACTGCATGCATTTTCCCTGTCTGTT...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTGCAGTAAAGCCAGGCTaGTCAAAGGCAATGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGAVKPG*SKAMYS Trigger: TGAGTACATTGCCTTTGACCAGCCTGGCTTTACTGC...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTCATGAGATGTGTTCCTaGTGTACTCTGCAGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGHEMCS*CTLQLL Trigger: GAGCAACTGCAGAGTACACCAGGAACACATCTCATG...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTTCAGTGGTGTTCCCTTaGGGAGGTGGAATATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGSVVFP*GGGIFS Trigger: AGAAAATATTCCACCTCCTCAAGGGAACACCACTGA...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTCAGACTCCAAAGAACTaGAGTGCCTTTATGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGQTPKN*SAFMSS Trigger: GGAAGACATAAAGGCACTTCAGTTCTTTGGAGTCTG...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTGCATGTTTTCAATGGTaGGCTTGTGGAGGAATTGGT | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGACFQW*ACGGIG Trigger: ACCAATTCCTCCACAAGCCCACCATTGAAAACATGC...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTGTTCCCTTGAGGAGGTaGAATATTTTCTGCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGVPLRR*NIFCLM Trigger: CATGAGGCAGAAAATATTCCACCTCCTCAAGGGAAC...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTCTATCAGAGGTGAAATaGAGCAGATACTCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGLSEVK*SRYSCS Trigger: ACTGCAAGAGTATCTGCTTCATTTCACCTCTGATAG...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTATCAGCTGCTGTTATTaGAACCACATCCCAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGISCCY*NHIPEF Trigger: GAATTCTGGGATGTGGTTGCAATAACAGCAGCTGAT...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTCTGCTTTTCATCAGCTaGTGTTATTGCAACCACATC | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGLLFIS*CYCNHI Trigger: GATGTGGTTGCAATAACAGCAGCTGATGAAAAGCAG...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTGTTCCTGGTGTACTCTaGAGTTGCTCCAGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVVPGVL*SCSRPQ Trigger: CTGGGGCCTGGAGCAACTGCAGAGTACACCAGGAAC...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTTGGCACAACAGTTTTTaGTATGACAGAACTGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGWHNSF*YDRTAD Trigger: ATCAGCAGTTCTGTCATAGCAAAAACTGTTGTGCCA...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTTTCTTCAAGTTGTCTTaGATGCCAAACACCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: VLASMGAAGKWCTCIHAGFFKLS*MPNTIV Trigger: TACTATGGTGTTTGGCATGCAAGACAACTTGAAGAA...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTCAGCTGCCACGGGTTTaGCTCTCAGCTCAGAAAATC | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVQLPRV*LSAQKI Trigger: GATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTG...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTTGCTCCAGGCCCCAGTaGCTGAAGAAAGTCTCCATA | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVCSRPQ*LKKVSI Trigger: TATGGAGACTTTCTTCAGGCACTGGGGCCTGGAGCA...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTCGACTCACTCAGAGATaGACAGACAGGGAAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVRLTQR*TDRENA Trigger: TGCATTTTCCCTGTCTGTTCATCTCTGAGTGAGTCG...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTTCAGCTCAGAAAATCTaGGCAGTTTCCGCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSSAQKI*AVSAGW Trigger: CCACCCTGCGGAAACTGCGCAGATTTTCTGAGCTGA...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTGAGTTCGATATCATCTaGACAGGTGACCAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVEFDII*TGDQDS Trigger: GGAGTCTTGGTCACCTGTGCAGATGATATCGAACTC...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGCCAGACTAGACGGATaGGCTAAGGCAGTAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSARLDG*AKAVKP Trigger: TGGCTTTACTGCCTTAGCCCATCCGTCTAGTCTGGC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTGCGCTCAGGAACACTTaGAGAGACACTGAAAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVALRNT*RDTESY Trigger: ATAGCTTTCAGTGTCTCTCCAAGTGTTCCTGAGCGC...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTCCACTATACTGTGAATaGCACAGGCTGTTCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSPLYCE*HRLFHW Trigger: CCAGTGGAACAGCCTGTGTCATTCACAGTATAGTGG...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTGGTGCATGTTTTCAATaGTGGGCTTGTGGAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVGACFQ*WACGGI Trigger: AATTCCTCCACAAGCCCACCATTGAAAACATGCACC...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGACAGGGAAAATGCATaGAGTCCACAGGCTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSDRENA*SPQAQI Trigger: AATCTGAGCCTGTGGACTGCATGCATTTTCCCTGTC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTCTCATGTCCAACAACTaGGACTCTTCTTTAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVLMSNN*DSSLVT Trigger: TGTCACTAAAGAAGAGTCCCAGTTGTTGGACATGAG...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGGTCCCAGCAGGATCTaGAAAAACATGGTATTGAAC | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSGPSRI*KNMVLN Trigger: GTTCAATACCATGTTTTTCCAGATCCTGCTGGGACC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTAGGTGGAATATTTTCTaGCTCATGTCCAACAACTGG | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSRWNIF*LMSNNW Trigger: CCAGTTGTTGGACATGAGGCAGAAAATATTCCACCT...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR GCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTTCCAAAGAACTGAAGTaGCTTTATGTCTTCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSSKELK*LYVFQC Trigger: ACACTGGAAGACATAAAGGCACTTCAGTTCTTTGGA...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGGAAATCCACGTACATaGCTAGTTTTAACTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSGNPRT*LVLTPT Trigger: TGTTGGAGTTAAAACTAGCCATGTACGTGGATTTCC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CCA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTTATTTCACAGTTCAGTaGGCCTTCACTTTTATAGAA | + |
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Preference number: 4 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVYFTVQ*AFTFIE Trigger: TTCTATAAAAGTGAAGGCCCACTGAACTGTGAAATA...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR TCA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTAAGGGAACAAAGTGTTaGTCCTCCATTTCCAATTTT | + |
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Preference number: 4 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSKGTKC*SSISNF Trigger: AAAATTGGAAATGGAGGATCAACACTTTGTTCCCTT...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS-3UTR CAA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTCGCATTGGGAAGGCGTaGGCTGTAGCCACCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLASMGAAGKWCTCIHAGRIGKA*AVATRV Trigger: CACTCTGGTGGCTACAGCCAACGCCTTCCCAATGCG...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 90 bp | CTGAGCCAGGGGCCACACAGCATCCTGAATCCACTATACTGTGAATaGCACAGGCTGTTCCACTGGAGCGCTCAGGAACACTTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSQGPHSILNPLYCE*HRLFHWSAQEHLER Trigger: TCTCTCCAAGTGTTCCTGAGCGCTCCAGTGGAACAGCCTGTGTCATTCACAGTATAGTGGATTCAGGATGCTGTGTGGCCCCTGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 90 bp | ACCACTGAGCCAGGGGCCACACAGCATCCTGAATCCACTATACTGTaGATGACACAGGCTGTTCCACTGGAGCGCTCAGGAACACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTEPGATQHPESTIL*MTQAVPLERSGTLG Trigger: TCCAAGTGTTCCTGAGCGCTCCAGTGGAACAGCCTGTGTCATTCACAGTATAGTGGATTCAGGATGCTGTGTGGCCCCTGGCTCAGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | CTGTTATTGCAACCACATCCCAGAATTCTCCAGCTGCCACGGGTTTaGCTCTCAGCTCAGAAAATCTGCGCAGTTTCCGCAGGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQPHPRILQLPRV*LSAQKICAVSAGWL Trigger: AAGCCACCCTGCGGAAACTGCGCAGATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | CTGGGACTCTTCTTTAGTGACATGAGATGTGTTCCTGGTGTACTCTaGAGTTGCTCCAGGCCCCAGTGCCTGAAGAAAGTCTCCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLFFSDMRCVPGVL*SCSRPQCLKKVSIG Trigger: GCCTATGGAGACTTTCTTCAGGCACTGGGGCCTGGAGCAACTGCAGAGTACACCAGGAACACATCTCATGTCACTAAAGAAGAGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | TTCATCAGCTGCTGTTATTGCAACCACATCCCAGAATTCTCCAGCTaGCACGGGTTTGCCTCTCAGCTCAGAAAATCTGCGCAGTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FISCCYCNHIPEFSS*HGFASQLRKSAQFP Trigger: CGGAAACTGCGCAGATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAGCAGCTGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | CTGTTGCTTGTAAGCGAGCTCCTGCTTTTCATCAGCTGCTGTTATTaGAACCACATCCCAGAATTCTCCAGCTGCCACGGGTTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLVSELLLFISCCY*NHIPEFSSCHGFAS Trigger: AGAGGCAAACCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAGCAGCTGATGAAAAGCAGGAGCTCGCTTACAAGCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | GTTCTAGCCTCTATGGGTGCCGCAGGCAAGTGGTGCACATGCATACATGCAGGTTCCAGACAAGTTCTGTaGACCAAAGCTTCGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLASMGAAGKWCTCIHAGSRQVL*TKASLS Trigger: AGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGA...ACCTGCATGTATGCATGTGCACCACTTGCCTGCGGCACCCATAGAGGCTAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | ATGAGATGTGTTCCTGGTGTACTCTGCAGTTGCTCCAGGCCCCAGTaGCTGAAGAAAGTCTCCATAGGCATCTATTTCACAGTTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MRCVPGVLCSCSRPQ*LKKVSIGIYFTVQW Trigger: CCACTGAACTGTGAAATAGATGCCTATGGAGACTTTCTTCAGGCACTGGGGCCTGGAGCAACTGCAGAGTACACCAGGAACACATCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 90 bp | ATTTTCTGCCTCATGTCCAACAACTGGGACTCTTCTTTAGTGACATaGGATGTGTTCCTGGTGTACTCTGCAGTTGCTCCAGGCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IFCLMSNNWDSSLVT*DVFLVYSAVAPGPS Trigger: ACTGGGGCCTGGAGCAACTGCAGAGTACACCAGGAACACATCTCATGTCACTAAAGAAGAGTCCCAGTTGTTGGACATGAGGCAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | CTCTTCTTTAGTGACATGAGATGTGTTCCTGGTGTACTCTGCAGTTaGTCCAGGCCCCAGTGCCTGAAGAAAGTCTCCATAGGCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LFFSDMRCVPGVLCS*SRPQCLKKVSIGIY Trigger: ATAGATGCCTATGGAGACTTTCTTCAGGCACTGGGGCCTGGAGCAACTGCAGAGTACACCAGGAACACATCTCATGTCACTAAAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 90 bp | TCACCATGTTGTAAGGAACTGTCAGAGTGCAAGACAAATACTCCATaGGTAGTGCCTACAGCCAGACTAGACGGATGGGCTAAGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPCCKELSECKTNTP*VVPTARLDGWAKAV Trigger: TACTGCCTTAGCCCATCCGTCTAGTCTGGCTGTAGGCACTACTCATGGAGTATTTGTCTTGCACTCTGACAGTTCCTTACAACATGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 90 bp | GTGTGCAATGGAAGACAGTCAGTGTCACCTCCAGACAAGTTCTGTTaGCCAAAGCTTCGTTGTCTATGCACAGCATTAAAGCGGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VCNGRQSVSPPDKFC*PKLRCLCTALKRCM Trigger: CATGCACCGCTTTAATGCTGTGCATAGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGAGGTGACACTGACTGTCTTCCATTGCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTTGGTGTACTCTGCAGTaGCTCCAGGCCCCAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSWCTLQ*LQAPVP Trigger: AGGCACTGGGGCCTGGAGCAACTGCAGAGTACACCA...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CCA 90 bp | TCCTGGATGGACAAAAGGTTAAAGTCACTTAGGTTGAATGGTGAATaGTTCCTTACAGCGCTTAACATCCCAAGGGATGCTGTAGCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWMDKRLKSLRLNGE*FLTALNIPRDAVAD Trigger: GTCGGCTACAGCATCCCTTGGGATGTTAAGCGCTGTAAGGAACCATTCACCATTCAACCTAAGTGACTTTAACCTTTTGTCCATCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTCCAGCTGCCACGGGTTaGCCTCTCAGCTCAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSPAATG*PLSSEN Trigger: ATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTGG...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTCCTCCATTTCCAATTTaGGTCCCAGCAGGATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVPPFPI*VPAGSG Trigger: TCCAGATCCTGCTGGGACCAAAATTGGAAATGGAGG...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 90 bp | TTTGTCTCCACAGAGGCTTTCCAAACACTCAAGGGAACAAAGTGTTaGTCCTCCATTTCCAATTTTGGTCCCAGCAGGATCTGGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FVSTEAFQTLKGTKC*SSISNFGPSRIWKN Trigger: GTTTTTCCAGATCCTGCTGGGACCAAAATTGGAAATGGAGGATCAACACTTTGTTCCCTTGAGTGTTTGGAAAGCCTCTGTGGAGACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGGGCTTGTGGAGGAATaGGTAGCATTGCCTGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSGLVEE*VALPVL Trigger: GAGTACAGGCAATGCTACCAATTCCTCCACAAGCCC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CCA 90 bp | ATCCATGTAAAACAGGCTATCTGTGTAGACATACTCAGTGTGCAATaGAAGACAGTCAGTGTCACCTCCAGACAAGTTCTGTTGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IHVKQAICVDILSVQ*KTVSVTSRQVLLTK Trigger: TTTGGTCAACAGAACTTGTCTGGAGGTGACACTGACTGTCTTCCATTGCACACTGAGTATGTCTACACAGATAGCCTGTTTTACATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTCATCAGCTGCTGTTATaGCAACCACATCCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVHQLLL*QPHPRI Trigger: AATTCTGGGATGTGGTTGCAATAACAGCAGCTGATG...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTGAGGAATTGGTAGCATaGCCTGTACTCAAGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSEELVA*PVLKVT Trigger: GGTGACCTTGAGTACAGGCAATGCTACCAATTCCTC...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTACACTGTTCTTCAAGTaGTCTTGCATGCCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVTLFFK*SCMPNT Trigger: GGTGTTTGGCATGCAAGACAACTTGAAGAACAGTGT...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTGTTCTTCAAGTTGTCTaGCATGCCAAACACCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVVLQVV*HAKHHS Trigger: ACTATGGTGTTTGGCATGCAAGACAACTTGAAGAAC...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CCA 90 bp | GAGTTATTAAGAACAACAACATTCAGTGGTGTTCCCTTGAGGAGGTaGAATATTTTCTGCCTCATGTCCAACAACTGGGACTCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ELLRTTTFSGVPLRR*NIFCLMSNNWDSSL Trigger: TAAAGAAGAGTCCCAGTTGTTGGACATGAGGCAGAAAATATTCCACCTCCTCAAGGGAACACCACTGAATGTTGTTGTTCTTAATAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTTTCAGAGAATTCCATTaGTCTCCACAGAGGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSFREFH*SPQRLS Trigger: GGAAAGCCTCTGTGGAGACAAATGGAATTCTCTGAA...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | TATAGCACTTTCATAGGACTAAGGAGGTTGACTTACAGAAGCAACACGGAGGTTTTAAAGTCACTTAGGTaGAATGGTGAATGGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSTFIGLRRLTYRSNTEVLKSLR*NGEWFL Trigger: AAGGAACCATTCACCATTCAACCTAAGTGACTTTAA...AACCTCCGTGTTGCTTCTGTAAGTCAACCTCCTTAGTCCTATGAAAGTGCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS-3UTR CAA 90 bp | CATAACCAGGAATTCCACCCATTTCATTTCCCTGCAGTTGTTTATGATTTGAGTCAAGGGAACAAAGTGTaGATCCTCCATTTCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HNQEFHPFHFPAVVYDLSQGNKV*ILHFQF Trigger: AAATTGGAAATGGAGGATCAACACTTTGTTCCCTTG...ACTCAAATCATAAACAACTGCAGGGAAATGAAATGGGTGGAATTCCTGGTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 90 bp | GCCTTTATGTCTTCCAGTGTTTTAACACTGTTCTTCAAGTTGTCTTaGATGCCAAACACCATAGTAGAATATTTTAAGTGTCCATTTATC | + |
|
Preference number: 5 (lower is better) Translates to: AFMSSSVLTLFFKLS*MPNTIVEYFKCPFI Trigger: GATAAATGGACACTTAAAATATTCTACTATGGTGTTTGGCATGCAAGACAACTTGAAGAACAGTGTTAAAACACTGGAAGACATAAAGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | CCAGGGGCCACACAGCATCCTGAATCCACTATACTGTaGATGACACAGGCTGTTCCACTGGAGCGCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGATQHPESTIL*MTQAVPLERSG Trigger: TCCTGAGCGCTCCAGTGGAACAGCCTGTGTCATTCACAGTATAGTGGATTCAGGATGCTGTGTGGCCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 90 bp | GCTGTTATTGCAACCACATCCCAGAATTCTCCAGCTGCCACGGGTTaGCCTCTCAGCTCAGAAAATCTGCGCAGTTTCCGCAGGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVIATTSQNSPAATG*PLSSENLRSFRRVA Trigger: AGCCACCCTGCGGAAACTGCGCAGATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | GGGCCACACAGCATCCTGAATCCACTATACTGTGAATaGCACAGGCTGTTCCACTGGAGCGCTCAGGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: GPHSILNPLYCE*HRLFHWSAQEH Trigger: GTGTTCCTGAGCGCTCCAGTGGAACAGCCTGTGTCATTCACAGTATAGTGGATTCAGGATGCTGTGTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 72 bp | CAACCACATCCCAGAATTCTCCAGCTGCCACGGGTTTaGCTCTCAGCTCAGAAAATCTGCGCAGTTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QPHPRILQLPRV*LSAQKICAVSA Trigger: TGCGGAAACTGCGCAGATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 72 bp | GTAAGCGAGCTCCTGCTTTTCATCAGCTGCTGTTATTaGAACCACATCCCAGAATTCTCCAGCTGCCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSELLLFISCCY*NHIPEFSSCHG Trigger: CCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAGCAGCTGATGAAAAGCAGGAGCTCGCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CCA 72 bp | AGACTAGACGGATGGGCTAAGGCAGTAAAGCCAGGCTaGTCAAAGGCAATGTACTCACTGTCCCCAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RLDGWAKAVKPG*SKAMYSLSPTL Trigger: CAGTGTTGGGGACAGTGAGTACATTGCCTTTGACCAGCCTGGCTTTACTGCCTTAGCCCATCCGTCTAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 72 bp | TGCTGTTATTGCAACCACATCCCAGAATTCTCCAGCTaGCACGGGTTTGCCTCTCAGCTCAGAAAATCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CCYCNHIPEFSS*HGFASQLRKSA Trigger: CGCAGATTTTCTGAGCTGAGAGGCAAACCCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS GCA 72 bp | AGTGACATGAGATGTGTTCCTGGTGTACTCTGCAGTTaGTCCAGGCCCCAGTGCCTGAAGAAAGTCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: SDMRCVPGVLCS*SRPQCLKKVSI Trigger: TATGGAGACTTTCTTCAGGCACTGGGGCCTGGAGCAACTGCAGAGTACACCAGGAACACATCTCATGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 72 bp | TGTAAGCGAGCTCCTGCTTTTCATCAGCTGCTGTTATaGCAACCACATCCCAGAATTCTCCAGCTGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: CKRAPAFHQLLL*QPHPRILQLPR Trigger: CCGTGGCAGCTGGAGAATTCTGGGATGTGGTTGCAATAACAGCAGCTGATGAAAAGCAGGAGCTCGCTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | TGTAAGGAACTGTCAGAGTGCAAGACAAATACTCCATaGGTAGTGCCTACAGCCAGACTAGACGGATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CKELSECKTNTP*VVPTARLDGWA Trigger: AGCCCATCCGTCTAGTCTGGCTGTAGGCACTACTCATGGAGTATTTGTCTTGCACTCTGACAGTTCCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 90 bp | ACAGTCAGTGTCACCTCCAGACAAGTTCTGTTGACCAAAGCTTCGTaGTCTATGCACAGCATTAAAGCGGTGCATGTTTTCAATGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVSVTSRQVLLTKAS*SMHSIKAVHVFNGG Trigger: CCCACCATTGAAAACATGCACCGCTTTAATGCTGTGCATAGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGAGGTGACACTGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 90 bp | AGTGTGCAATGGAAGACAGTCAGTGTCACCTCCAGACAAGTTCTGTaGACCAAAGCTTCGTTGTCTATGCACAGCATTAAAGCGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVQWKTVSVTSRQVL*TKASLSMHSIKAVH Trigger: ATGCACCGCTTTAATGCTGTGCATAGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGAGGTGACACTGACTGTCTTCCATTGCACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | CTCATGTCCAACAACTGGGACTCTTCTTTAGTGACATaGGATGTGTTCCTGGTGTACTCTGCAGTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LMSNNWDSSLVT*DVFLVYSAVAP Trigger: TGGAGCAACTGCAGAGTACACCAGGAACACATCTCATGTCACTAAAGAAGAGTCCCAGTTGTTGGACATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 72 bp | CCAGAGTGGATTAGCAGGACCTTCAGAGAATTCCATTaGTCTCCACAGAGGCTTTCCAAACACTCAAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PEWISRTFREFH*SPQRLSKHSRE Trigger: TTCCCTTGAGTGTTTGGAAAGCCTCTGTGGAGACAAATGGAATTCTCTGAAGGTCCTGCTAATCCACTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | ACAGAGGCTTTCCAAACACTCAAGGGAACAAAGTGTTaGTCCTCCATTTCCAATTTTGGTCCCAGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TEAFQTLKGTKC*SSISNFGPSRI Trigger: GATCCTGCTGGGACCAAAATTGGAAATGGAGGATCAACACTTTGTTCCCTTGAGTGTTTGGAAAGCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | ACATCTGATAAATGGGTTCACCAAGTGGTAAGGCTGTaGAGATCTTTCCTAAAGCACTCGCATTGGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSDKWVHQVVRL*RSFLKHSHWEG Trigger: GCCTTCCCAATGCGAGTGCTTTAGGAAAGATCTTCACAGCCTTACCACTTGGTGAACCCATTTATCAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS TCA 72 bp | GGAAGACAGTCAGTGTCACCTCCAGACAAGTTCTGTTaGCCAAAGCTTCGTTGTCTATGCACAGCATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRQSVSPPDKFC*PKLRCLCTALK Trigger: CTTTAATGCTGTGCATAGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGAGGTGACACTGACTGTCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 72 bp | CACAGAGGCTTTCCAAACACTCAAGGGAACAAAGTGTaGATCCTCCATTTCCAATTTTGGTCCCAGCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HRGFPNTQGNKV*ILHFQFWSQQD Trigger: ATCCTGCTGGGACCAAAATTGGAAATGGAGGATCAACACTTTGTTCCCTTGAGTGTTTGGAAAGCCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
||
| CDS CAA 72 bp | GTCACCTCCAGACAAGTTCTGTTGACCAAAGCTTCGTaGTCTATGCACAGCATTAAAGCGGTGCATGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VTSRQVLLTKAS*SMHSIKAVHVF Trigger: GAAAACATGCACCGCTTTAATGCTGTGCATAGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS CCA 72 bp | CTCCAGGCCTCATGTTTGAGGGGAAATCCACGTACATaGCTAGTTTTAACTCCAACATCTGATAAATGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LQASCLRGNPRT*LVLTPTSDKWV Trigger: AACCCATTTATCAGATGTTGGAGTTAAAACTAGCCATGTACGTGGATTTCCCCTCAAACATGAGGCCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS CAA 72 bp | TGGAAGACAGTCAGTGTCACCTCCAGACAAGTTCTGTaGACCAAAGCTTCGTTGTCTATGCACAGCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: WKTVSVTSRQVL*TKASLSMHSIK Trigger: TTTAATGCTGTGCATAGACAACGAAGCTTTGGTCAACAGAACTTGTCTGGAGGTGACACTGACTGTCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS CAA 90 bp | ATTTGTCTCCACAGAGGCTTTCCAAACACTCAAGGGAACAAAGTGTaGATCCTCCATTTCCAATTTTGGTCCCAGCAGGATCTGGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: ICLHRGFPNTQGNKV*ILHFQFWSQQDLEK Trigger: TTTTTCCAGATCCTGCTGGGACCAAAATTGGAAATGGAGGATCAACACTTTGTTCCCTTGAGTGTTTGGAAAGCCTCTGTGGAGACAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS CCA 72 bp | GACAAAAGGTTAAAGTCACTTAGGTTGAATGGTGAATaGTTCCTTACAGCGCTTAACATCCCAAGGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: DKRLKSLRLNGE*FLTALNIPRDA Trigger: AGCATCCCTTGGGATGTTAAGCGCTGTAAGGAACCATTCACCATTCAACCTAAGTGACTTTAACCTTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS CAA 72 bp | GAGTTATTAAGAACAACAACATTCAGTGGTGTTCCCTaGAGGAGGTGGAATATTTTCTGCCTCATGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: ELLRTTTFSGVP*RRWNIFCLMSN Trigger: GTTGGACATGAGGCAGAAAATATTCCACCTCCTCAAGGGAACACCACTGAATGTTGTTGTTCTTAATAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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| CDS GCA 72 bp | TCTTCCAGTGTTTTAACACTGTTCTTCAAGTTGTCTTaGATGCCAAACACCATAGTAGAATATTTTAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSVLTLFFKLS*MPNTIVEYFKC Trigger: ACACTTAAAATATTCTACTATGGTGTTTGGCATGCAAGACAACTTGAAGAACAGTGTTAAAACACTGGAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066568.6 |
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