Pregenerated sensors for FNDC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074738Ensembl transcript IDs: ENSMUST00000099265.3
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGGGTGAATCCCCAGCCTCCTGAGGTGGAGGACACTCACCCCTaGGTGCAGCAGCTGGACACTGGGCCCAGCCTGCTGAGCTACATC | + |
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Preference number: 1 (lower is better) Translates to: ERVNPQPPEVEDTHP*VQQLDTGPSLLSYI Trigger: GATGTAGCTCAGCAGGCTGGGCCCAGTGTCCAGCTGCTGCACCCAGGGGTGAGTGTCCTCCACCTCAGGAGGCTGGGGATTCACCCTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 90 bp | CTATGGGCCAGTCTGAGGCCTGAGTCTGGAAGGCAGATACCCATCTaGGGCTGGCAAGGTCGTGGGATGATGCCAAGGTCCCTGCATGGG | + |
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Preference number: 1 (lower is better) Translates to: LWASLRPESGRQIPI*GWQGRGMMPRSLHG Trigger: CCCATGCAGGGACCTTGGCATCATCCCACGACCTTGCCAGCCCCAGATGGGTATCTGCCTTCCAGACTCAGGCCTCAGACTGGCCCATAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 90 bp | GCCAGTCTGAGGCCTGAGTCTGGAAGGCAGATACCCATCTGGGGCTaGCAAGGTCGTGGGATGATGCCAAGGTCCCTGCATGGGCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: ASLRPESGRQIPIWG*QGRGMMPRSLHGLV Trigger: AACTAGCCCATGCAGGGACCTTGGCATCATCCCACGACCTTGCCAGCCCCAGATGGGTATCTGCCTTCCAGACTCAGGCCTCAGACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 90 bp | CCACTGAGGTTTCTAGGCTTGGGACCCAGAGCACAGTTAAAGGTTTaGCGGGGCAAGGCTGGCAGCTTTCCTTCAGCCCCTCAGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: PLRFLGLGPRAQLKV*RGKAGSFPSAPQGP Trigger: GGGACCCTGAGGGGCTGAAGGAAAGCTGCCAGCCTTGCCCCGCCAAACCTTTAACTGTGCTCTGGGTCCCAAGCCTAGAAACCTCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR TCA 90 bp | ATGCATAAGCCAGACAGCCACAGGGCCACAGTCCCCATGGACAGCTaGGGGATGATGGGTGGCTCCTGCAGTGGGTCAGAGATACTAAGG | + |
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Preference number: 1 (lower is better) Translates to: MHKPDSHRATVPMDS*GMMGGSCSGSEILR Trigger: CCTTAGTATCTCTGACCCACTGCAGGAGCCACCCATCATCCCTCAGCTGTCCATGGGGACTGTGGCCCTGTGGCTGTCTGGCTTATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR TCA 90 bp | CACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGGTaGGAATGGGAGGAAAAATCGCCAAGGTTAAGTTCAGTGGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: HGCCQPGLRSSRSLG*EWEEKSPRLSSVVR Trigger: TCTGACCACTGAACTTAACCTTGGCGATTTTTCCTCCCATTCTCACCCCAGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR TCA 90 bp | CAGGCTCCTGGAAGTCTCAAAGATGGTGTGTCCTCAATGGGACTCTaGCCTGAAGCATGCATAAGCCAGACAGCCACAGGGCCACAGTCC | + |
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Preference number: 1 (lower is better) Translates to: QAPGSLKDGVSSMGL*PEACISQTATGPQS Trigger: GGACTGTGGCCCTGTGGCTGTCTGGCTTATGCATGCTTCAGGTCAGAGTCCCATTGAGGACACACCATCTTTGAGACTTCCAGGAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR GCA 90 bp | TCTCGGACACCCACAAAGGAAGACAAAACAGGGCCTGTGAACCCTTaGCCCAGGCTCCTGGAAGTCTCAAAGATGGTGTGTCCTCAATGG | + |
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Preference number: 1 (lower is better) Translates to: SRTPTKEDKTGPVNP*PRLLEVSKMVCPQW Trigger: CCATTGAGGACACACCATCTTTGAGACTTCCAGGAGCCTGGGGCAAGGGTTCACAGGCCCTGTTTTGTCTTCCTTTGTGGGTGTCCGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 90 bp | GAAGGGAATGTATATTCTGGCCGGCTCTATAAAGGCCTCTGGAGATaGAGAAGACCCCTGGCTGCCATTGACACTCTAGCCCAGGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: EGNVYSGRLYKGLWR*RRPLAAIDTLAQAY Trigger: ATAGGCCTGGGCTAGAGTGTCAATGGCAGCCAGGGGTCTTCTCCATCTCCAGAGGCCTTTATAGAGCCGGCCAGAATATACATTCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 90 bp | TTGCCAGAAGGGAATGTATATTCTGGCCGGCTCTATAAAGGCCTCTaGAGATGGAGAAGACCCCTGGCTGCCATTGACACTCTAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LPEGNVYSGRLYKGL*RWRRPLAAIDTLAQ Trigger: CTGGGCTAGAGTGTCAATGGCAGCCAGGGGTCTTCTCCATCTCCAGAGGCCTTTATAGAGCCGGCCAGAATATACATTCCCTTCTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR TCA 90 bp | GTACAGGCTCCAGAGGTCACTCCTCCCAATCTGCAAAGTACAAAGTaGCCAAGCAACAATCACGGCCAAGCTTTGACAACCTGGCACAGG | + |
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Preference number: 1 (lower is better) Translates to: VQAPEVTPPNLQSTK*PSNNHGQALTTWHR Trigger: CCTGTGCCAGGTTGTCAAAGCTTGGCCGTGATTGTTGCTTGGTCACTTTGTACTTTGCAGATTGGGAGGAGTGACCTCTGGAGCCTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR TCA 90 bp | AGACACAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTaGGTGACCTCAACCAGGTGCCTGTGTGTGTATCAGGAGGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: RHRGNALFFPISQGG*VTSTRCLCVYQEVG Trigger: GCCTACCTCCTGATACACACACAGGCACCTGGTTGAGGTCACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 90 bp | ACCTGGCACAGGATGAAAGTTCAGGTTCATGATCCTGGGTGCCAGTaGTTTTTGCCAGAAGGGAATGTATATTCTGGCCGGCTCTATAAA | + |
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Preference number: 1 (lower is better) Translates to: TWHRMKVQVHDPGCQ*FLPEGNVYSGRLYK Trigger: TTTATAGAGCCGGCCAGAATATACATTCCCTTCTGGCAAAAACCACTGGCACCCAGGATCATGAACCTGAACTTTCATCCTGTGCCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGTAGGACACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGGGGCAAGGTCGTGGGATaGTGCCAAGGTCCCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: EVGHGCCQPGLRSSRSLGGKVVG*CQGPCM Trigger: CATGCAGGGACCTTGGCATCATCCCACGACCTTGCC...CCCCAGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAGGTAGGACACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGCCTGTGAACCCTTaGCCCAGGCTCCTGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: QRGRTRVLPARAQVITVAGPVNP*PRLLEV Trigger: GACTTCCAGGAGCCTGGGGCAAGGGTTCACAGGCCC...AGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAGGACACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGGACCAGCCTCTGGCCATaGAGAAGGAGGGGCACTATC | + |
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Preference number: 2 (lower is better) Translates to: EVGHGCCQPGLRSSRSLGTSLWP*RRRGTI Trigger: GATAGTGCCCCTCCTTCTGCATGGCCAGAGGCTGGT...CCCCAGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAGGTAGGACACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTACAAAACAGGGCCTGTaGACCCTTGCCCCAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QRGRTRVLPARAQVITVATKQGL*TLAPGS Trigger: GGAGCCTGGGGCAAGGGTTCACAGGCCCTGTTTTGT...AGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGGGGCACTATCACTGGGGTCAGAGCTCAGGTGTGAGAAGACCTGGGCTCCCACTGGGGTAAGGTaGGGTGGGTACAGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: EGGALSLGSELRCEKTWAPTGVR*GGYRLQ Trigger: CTGGAGCCTGTACCCACCCCACCTTACCCCAGTGGG...AGCCCAGGTCTTCTCACACCTGAGCTCTGACCCCAGTGATAGTGCCCCTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGGGGCACTATCACTGGGGTCAGAGCTCAGGTGTGAGAAGACCTGGGCTGCAGCAGCTGGACACTaGGCCCAGCCTGCTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: EGGALSLGSELRCEKTWAAAAGH*AQPAEL Trigger: TAGCTCAGCAGGCTGGGCCCAGTGTCCAGCTGCTGC...AGCCCAGGTCTTCTCACACCTGAGCTCTGACCCCAGTGATAGTGCCCCTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGTTAAAGGTTTGGCGGGGCAAGGCTGGCAGCTTTCCTTCAGCCCCTCAGTCCCCATGGACAGCTaGGGGATGATGGGTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: STVKGLAGQGWQLSFSPSVPMDS*GMMGGS Trigger: GGAGCCACCCATCATCCCTCAGCTGTCCATGGGGAC...TGAGGGGCTGAAGGAAAGCTGCCAGCCTTGCCCCGCCAAACCTTTAACTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAGGGGCACTATCACTGGGGTCAGAGCTCAGGTGTGAGAAGACCTGGGCTAGCAAGAGGAAAGGGTaGATCCCCAGCCTCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: EGGALSLGSELRCEKTWASKRKG*IPSLLR Trigger: CCTCAGGAGGCTGGGGATTCACCCTTTCCTCTTGCT...AGCCCAGGTCTTCTCACACCTGAGCTCTGACCCCAGTGATAGTGCCCCTCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTGACCTCAACCAGGTGCCTGTGTGTGTATCAGGAGGTAGGCAAGACCAGACACTCACCCCTGGGTaGAGCAGCTGGACACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSDLNQVPVCVSGGRQDQTLTPG*SSWTLG Trigger: GCCCAGTGTCCAGCTGCTGCACCCAGGGGTGAGTGT...CTGGTCTTGCCTACCTCCTGATACACACACAGGCACCTGGTTGAGGTCACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAACCAGGTGCCTGTGTGTGTATCAGGAGGTAGGCAAGACCAGCCTCTGGCCGCACAGTTAAAGGTTTaGCGGGGCAAGGCTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LNQVPVCVSGGRQDQPLAAQLKV*RGKAGS Trigger: GCTGCCAGCCTTGCCCCGCCAAACCTTTAACTGTGC...GGCCAGAGGCTGGTCTTGCCTACCTCCTGATACACACACAGGCACCTGGTTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGGTAGGACACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTCGTAAAGTAGCACTGTaGCCACTGAGGTTTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: QRGRTRVLPARAQVITVARKVAL*PLRFLG Trigger: GCCTAGAAACCTCAGTGGCCACAGTGCTACTTTACG...AGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGACCTCAACCAGGTGCCTGTGTGTGTATCAGGAGGTAGGCAAGACCAGTGGGGTAAGGTGGGGTaGGTACAGGCTCCAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSDLNQVPVCVSGGRQDQWGKVG*VQAPEV Trigger: GACCTCTGGAGCCTGTACCCACCCCACCTTACCCCA...CTGGTCTTGCCTACCTCCTGATACACACACAGGCACCTGGTTGAGGTCACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGAGACACAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTGGCCTATGGGCCAGTCTaGGGCCTGAGTCTGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: GSETQGQCLILPNITRWLAYGPV*GLSLEG Trigger: GCCTTCCAGACTCAGGCCTCAGACTGGCCCATAGGC...CAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTGTGTCTCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GTATCAGGAGGTAGGCAAGACCAGCCTCTGGCCATGCAGAAGGAGGGGCACTATGGGTGGCTCCTGCAGTaGGTCAGAGATACTAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VSGGRQDQPLAMQKEGHYGWLLQ*VRDTKA Trigger: TGCCTTAGTATCTCTGACCCACTGCAGGAGCCACCC...ATAGTGCCCCTCCTTCTGCATGGCCAGAGGCTGGTCTTGCCTACCTCCTGATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGAGAATGGGAGGAAAAATCGCCAAGGTTAAGTTCAGTGGTCAGAGCCCAGGCCAGTCTGAGGCCTaGGTCTGGAAGGCAGATACC | + |
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Preference number: 2 (lower is better) Translates to: GVRMGGKIAKVKFSGQSPGQSEA*VWKADT Trigger: GGTATCTGCCTTCCAGACTCAGGCCTCAGACTGGCC...TGGGCTCTGACCACTGAACTTAACCTTGGCGATTTTTCCTCCCATTCTCACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCTGCAGTGGGTCAGAGATACTAAGGCACAAAGCTAACCTAAGCCCACTGAAAGGCCTCTGGAGATaGAGAAGACCCCTGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GSCSGSEILRHKANLSPLKGLWR*RRPLAA Trigger: GGCAGCCAGGGGTCTTCTCCATCTCCAGAGGCCTTT...CAGTGGGCTTAGGTTAGCTTTGTGCCTTAGTATCTCTGACCCACTGCAGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGCACTGTGGCCACTGAGGTTTCTAGGCTTGGGACCCAGAGCACAGTTAAAGCTGAGGGATGATGGGTaGCTCCTGCAGTGGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: VALWPLRFLGLGPRAQLKLRDDG*LLQWVR Trigger: TCTGACCCACTGCAGGAGCCACCCATCATCCCTCAG...CTTTAACTGTGCTCTGGGTCCCAAGCCTAGAAACCTCAGTGGCCACAGTGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAACCAGGTGCCTGTGTGTGTATCAGGAGGTAGGCAAGACCAGCCTCTGGCCGTTCATGATCCTGGGTaGCAGTGGTTTTTGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LNQVPVCVSGGRQDQPLAVHDPG*QWFLPE Trigger: TTCTGGCAAAAACCACTGGCACCCAGGATCATGAAC...GGCCAGAGGCTGGTCTTGCCTACCTCCTGATACACACACAGGCACCTGGTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGCTACATCATGGCTCTTGGCTTCTCGGACACCCACAAAGGAAGACAAAAGGGCTGGCAAGGTCGTaGGATGATGCCAAGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: AELHHGSWLLGHPQRKTKGLARS*DDAKVP Trigger: AGGGACCTTGGCATCATCCCACGACCTTGCCAGCCC...TTTTGTCTTCCTTTGTGGGTGTCCGAGAAGCCAAGAGCCATGATGTAGCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTCAGAGACACAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTGGAGGGGCACTATCACTaGGGTCAGAGCTCAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GSETQGQCLILPNITRWLEGHYH*GQSSGV Trigger: CACACCTGAGCTCTGACCCCAGTGATAGTGCCCCTC...CAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTGTGTCTCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CAA 90 bp | TTCTCGGACACCCACAAAGGAAGACAAAACAGGGCCTGTGAACCCTaGCCCCAGGCTCCTGGAAGTCTCAAAGATGGTGTGTCCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: FSDTHKGRQNRACEP*PQAPGSLKDGVSSM Trigger: CATTGAGGACACACCATCTTTGAGACTTCCAGGAGCCTGGGGCAAGGGTTCACAGGCCCTGTTTTGTCTTCCTTTGTGGGTGTCCGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATGCATAAGCCAGACAGCCACAGGGCCACAGTCCCCATGGACAGCTGAGCAAGCTTTGACAACCTaGCACAGGATGAAAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EACISQTATGPQSPWTAEQALTT*HRMKVQ Trigger: CTGAACTTTCATCCTGTGCCAGGTTGTCAAAGCTTG...CTCAGCTGTCCATGGGGACTGTGGCCCTGTGGCTGTCTGGCTTATGCATGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGGGGCACTATCACTGGGGTCAGAGCTCAGGTGTGAGAAGACCTGGGCTTCACTCCTCCCAATCTaGAAAGTACAAAGTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: EGGALSLGSELRCEKTWASLLPI*KVQSDQ Trigger: TTGGTCACTTTGTACTTTGCAGATTGGGAGGAGTGA...AGCCCAGGTCTTCTCACACCTGAGCTCTGACCCCAGTGATAGTGCCCCTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTGAGTGACCTCAACATACCCATCTGGGGCTaGCAAGGTCGTGGGATGATG | + |
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Preference number: 2 (lower is better) Translates to: QGQCLILPNITRWLSDLNIPIWG*QGRGMM Trigger: CATCATCCCACGACCTTGCCAGCCCCAGATGGGTAT...GTTGAGGTCACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGCACTGTGGCCACTGAGGTTTCTAGGCTTGGGACCCAGAGCACAGTTAAAGCTCTATAAAGGCCTCTaGAGATGGAGAAGACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VALWPLRFLGLGPRAQLKLYKGL*RWRRPL Trigger: CAGGGGTCTTCTCCATCTCCAGAGGCCTTTATAGAG...CTTTAACTGTGCTCTGGGTCCCAAGCCTAGAAACCTCAGTGGCCACAGTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGAGAATGGGAGGAAAAATCGCCAAGGTTAAGTTCAGTGGTCAGAGCCCACTTGCCCCAGGCTCCTaGAAGTCTCAAAGATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GVRMGGKIAKVKFSGQSPLAPGS*KSQRWC Trigger: ACACCATCTTTGAGACTTCCAGGAGCCTGGGGCAAG...TGGGCTCTGACCACTGAACTTAACCTTGGCGATTTTTCCTCCCATTCTCACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CAA 90 bp | CACAGGATGAAAGTTCAGGTTCATGATCCTGGGTGCCAGTGGTTTTaGCCAGAAGGGAATGTATATTCTGGCCGGCTCTATAAAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HRMKVQVHDPGCQWF*PEGNVYSGRLYKGL Trigger: GAGGCCTTTATAGAGCCGGCCAGAATATACATTCCCTTCTGGCAAAAACCACTGGCACCCAGGATCATGAACCTGAACTTTCATCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTGAGTGACCTCAACCAACCTGGCACAGGATaGAAGTTCAGGTTCATGATC | + |
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Preference number: 2 (lower is better) Translates to: QGQCLILPNITRWLSDLNQPGTG*KFRFMI Trigger: GATCATGAACCTGAACTTTCATCCTGTGCCAGGTTG...GTTGAGGTCACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCTGCAGTGGGTCAGAGATACTAAGGCACAAAGCTAACCTAAGCCCACTGGGTGCCAGTGGTTTTTaGCAGAAGGGAATGTATATT | + |
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Preference number: 2 (lower is better) Translates to: GSCSGSEILRHKANLSPLGASGF*QKGMYI Trigger: AATATACATTCCCTTCTGGCAAAAACCACTGGCACC...CAGTGGGCTTAGGTTAGCTTTGTGCCTTAGTATCTCTGACCCACTGCAGGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR GCA 72 bp | GGGCAGAGCAAAGACAGAGAGGTAGGACACGGGTGCTaGCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GQSKDREVGHGC*QPGLRSSRSLG Trigger: CCCCAGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTCTCTGTCTTTGCTCTGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR TCA 72 bp | CCAGACAGCCACAGGGCCACAGTCCCCATGGACAGCTaGGGGATGATGGGTGGCTCCTGCAGTGGGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: PDSHRATVPMDS*GMMGGSCSGSE Trigger: CTCTGACCCACTGCAGGAGCCACCCATCATCCCTCAGCTGTCCATGGGGACTGTGGCCCTGTGGCTGTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR-3UTR CAA 90 bp | GAGGTAGGACACGGGTGCTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGGCTGAGGTTTCTAGGCTaGGGACCCAGAGCACAGTTA | + |
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Preference number: 3 (lower is better) Translates to: EVGHGCCQPGLRSSRSLGLRFLG*GPRAQL Trigger: TAACTGTGCTCTGGGTCCCAAGCCTAGAAACCTCAG...CCCCAGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR GCA 72 bp | AACGGGCAGAGCAAAGACAGAGAGGTAGGACACGGGTaGTGCCAGCCAGGGCTCAGGTCATCACGGTCGCTG | + |
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Preference number: 3 (lower is better) Translates to: NGQSKDREVGHG*CQPGLRSSRSL Trigger: CAGCGACCGTGATGACCTGAGCCCTGGCTGGCAGCACCCGTGTCCTACCTCTCTGTCTTTGCTCTGCCCGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 72 bp | CAGCCTCTGGCCATGCAGAAGGAGGGGCACTATCACTaGGGTCAGAGCTCAGGTGTGAGAAGACCTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: QPLAMQKEGHYH*GQSSGVRRPGL Trigger: GAGCCCAGGTCTTCTCACACCTGAGCTCTGACCCCAGTGATAGTGCCCCTCCTTCTGCATGGCCAGAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | GTACAAGCAAGAGGAAAGGGTGAATCCCCAGCCTCCTaGGGTGGAGGACACTCACCCCTGGGTGCAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VQARGKGESPAS*GGGHSPLGAAA Trigger: AGCTGCTGCACCCAGGGGTGAGTGTCCTCCACCTCAGGAGGCTGGGGATTCACCCTTTCCTCTTGCTTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | AGGCCTGAGTCTGGAAGGCAGATACCCATCTGGGGCTaGCAAGGTCGTGGGATGATGCCAAGGTCCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RPESGRQIPIWG*QGRGMMPRSLH Trigger: ATGCAGGGACCTTGGCATCATCCCACGACCTTGCCAGCCCCAGATGGGTATCTGCCTTCCAGACTCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | AGTCTGAGGCCTGAGTCTGGAAGGCAGATACCCATCTaGGGCTGGCAAGGTCGTGGGATGATGCCAAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLRPESGRQIPI*GWQGRGMMPRS Trigger: GGACCTTGGCATCATCCCACGACCTTGCCAGCCCCAGATGGGTATCTGCCTTCCAGACTCAGGCCTCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR GCA 72 bp | GTGTATCAGGAGGTAGGCAAGACCAGCCTCTGGCCATaGAGAAGGAGGGGCACTATCACTGGGGTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VYQEVGKTSLWP*RRRGTITGVRA Trigger: AGCTCTGACCCCAGTGATAGTGCCCCTCCTTCTGCATGGCCAGAGGCTGGTCTTGCCTACCTCCTGATACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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| 3UTR CCA 72 bp | TTTCTAGGCTTGGGACCCAGAGCACAGTTAAAGGTTTaGCGGGGCAAGGCTGGCAGCTTTCCTTCAGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLGLGPRAQLKV*RGKAGSFPSAP Trigger: AGGGGCTGAAGGAAAGCTGCCAGCCTTGCCCCGCCAAACCTTTAACTGTGCTCTGGGTCCCAAGCCTAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | CTCGGACACCCACAAAGGAAGACAAAACAGGGCCTGTaGACCCTTGCCCCAGGCTCCTGGAAGTCTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGHPQRKTKQGL*TLAPGSWKSQR Trigger: TCTTTGAGACTTCCAGGAGCCTGGGGCAAGGGTTCACAGGCCCTGTTTTGTCTTCCTTTGTGGGTGTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | TGCCAGCCAGGGCTCAGGTCATCACGGTCGCTGGGGTaGGAATGGGAGGAAAAATCGCCAAGGTTAAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CQPGLRSSRSLG*EWEEKSPRLSS Trigger: TGAACTTAACCTTGGCGATTTTTCCTCCCATTCTCACCCCAGCGACCGTGATGACCTGAGCCCTGGCTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | CACTGGGCCCAGCCTGCTGAGCTACATCATGGCTCTTaGCTTCTCGGACACCCACAAAGGAAGACAAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HWAQPAELHHGS*LLGHPQRKTKQ Trigger: CTGTTTTGTCTTCCTTTGTGGGTGTCCGAGAAGCCAAGAGCCATGATGTAGCTCAGCAGGCTGGGCCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | AGGTGTGAGAAGACCTGGGCTCGTAAAGTAGCACTGTaGCCACTGAGGTTTCTAGGCTTGGGACCCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RCEKTWARKVAL*PLRFLGLGPRA Trigger: TGCTCTGGGTCCCAAGCCTAGAAACCTCAGTGGCCACAGTGCTACTTTACGAGCCCAGGTCTTCTCACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | GTATATTCTGGCCGGCTCTATAAAGGCCTCTGGAGATaGAGAAGACCCCTGGCTGCCATTGACACTCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VYSGRLYKGLWR*RRPLAAIDTLA Trigger: GGCTAGAGTGTCAATGGCAGCCAGGGGTCTTCTCCATCTCCAGAGGCCTTTATAGAGCCGGCCAGAATATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | AATCCTAATCAAGGCAGTACAAGCAAGAGGAAAGGGTaGATCCCCAGCCTCCTGAGGTGGAGGACACTCACC | + |
|
Preference number: 3 (lower is better) Translates to: NPNQGSTSKRKG*IPSLLRWRTLT Trigger: GGTGAGTGTCCTCCACCTCAGGAGGCTGGGGATTCACCCTTTCCTCTTGCTTGTACTGCCTTGATTAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR GCA 72 bp | AGTGGTCAGAGCCCAGGCTCAGAGACACAGGGGCAATaGCTTATTCTTCCCAATATCACAAGGTGGCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SGQSPGSETQGQ*LILPNITRWLS Trigger: ACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTGTGTCTCTGAGCCTGGGCTCTGACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | GGGAATGTATATTCTGGCCGGCTCTATAAAGGCCTCTaGAGATGGAGAAGACCCCTGGCTGCCATTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: GNVYSGRLYKGL*RWRRPLAAIDT Trigger: AGTGTCAATGGCAGCCAGGGGTCTTCTCCATCTCCAGAGGCCTTTATAGAGCCGGCCAGAATATACATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | CAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTaGCTGAGTGACCTCAACCAGGTGCCTGTGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QGQCLILPNITR*LSDLNQVPVCV Trigger: TACACACACAGGCACCTGGTTGAGGTCACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | ATGCCTTATTCTTCCCAATATCACAAGGTGGCTGAGTaGCCTCAACCAGGTGCCTGTGTGTGTATCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPYSSQYHKVAE*PQPGACVCIRR Trigger: CCTCCTGATACACACACAGGCACCTGGTTGAGGTCACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | GGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTaGGTGACCTCAACCAGGTGCCTGTGTGTGTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: GNALFFPISQGG*VTSTRCLCVYQ Trigger: CTGATACACACACAGGCACCTGGTTGAGGTCACTCAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR TCA 72 bp | TTTGACAACCTGGCACAGGATGAAAGTTCAGGTTCATaGTCCTGGGTGCCAGTGGTTTTTGCCAGAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FDNLAQDESSGS*SWVPVVFARRE Trigger: TTCCCTTCTGGCAAAAACCACTGGCACCCAGGATCATGAACCTGAACTTTCATCCTGTGCCAGGTTGTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CCA 72 bp | AGGATGAAAGTTCAGGTTCATGATCCTGGGTGCCAGTaGTTTTTGCCAGAAGGGAATGTATATTCTGGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: RMKVQVHDPGCQ*FLPEGNVYSGR Trigger: CCGGCCAGAATATACATTCCCTTCTGGCAAAAACCACTGGCACCCAGGATCATGAACCTGAACTTTCATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR GCA 72 bp | TGGCACAGGATGAAAGTTCAGGTTCATGATCCTGGGTaGCAGTGGTTTTTGCCAGAAGGGAATGTATATTCT | + |
|
Preference number: 3 (lower is better) Translates to: WHRMKVQVHDPG*QWFLPEGNVYS Trigger: AGAATATACATTCCCTTCTGGCAAAAACCACTGGCACCCAGGATCATGAACCTGAACTTTCATCCTGTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCATGCATAAGCCAGACAGCCACAGGGCCACAGTCCCCATGGACAGCTGAGACTGCAGCAGCACGCTaGGATTGCGCAGGACGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EACISQTATGPQSPWTAETAAAR*DCAGRG Trigger: CCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGT...CTCAGCTGTCCATGGGGACTGTGGCCCTGTGGCTGTCTGGCTTATGCATGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS-3UTR GCA 90 bp | AGCACAGTTAAAGGTTTGGCGGGGCAAGGCTGGCAGCTTTCCTTCAGCCCCTCAGGAGCCAGGCGCCACTaGAGCAGCACGCTGCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: STVKGLAGQGWQLSFSPSGARRH*SSTLRL Trigger: CAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCC...TGAGGGGCTGAAGGAAAGCTGCCAGCCTTGCCCCGCCAAACCTTTAACTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGAGACACAGGGGCAATGCCTTATTCTTCCCAATATCACAAGGTGGCTGCGATTGCGCAGGACGTaGGCGCGCAGCGAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GSETQGQCLILPNITRWLRLRRT*ARSEPP Trigger: GGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCG...CAGCCACCTTGTGATATTGGGAAGAATAAGGCATTGCCCCTGTGTCTCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCCCAGGCTCAGAGACACAGGGGCAATGCCTTATTCTTCCCAATATCACCTGCCGGTTCGGCGGTaGACTCCACGCACTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEPRLRDTGAMPYSSQYHLPVRR*TPRTRP Trigger: TGGCCGAGTGCGTGGAGTTCACCGCCGAACCGGCAG...GTGATATTGGGAAGAATAAGGCATTGCCCCTGTGTCTCTGAGCCTGGGCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CAA 72 bp | GTTTCTAGGCTTGGGACCCAGAGCACAGTTAAAGGTTaGGCGGGGCAAGGCTGGCAGCTTTCCTTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRLGTQSTVKG*AGQGWQLSFSP Trigger: GGGGCTGAAGGAAAGCTGCCAGCCTTGCCCCGCCAAACCTTTAACTGTGCTCTGGGTCCCAAGCCTAGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| 3UTR CAA 72 bp | CGTAAAGTAGCACTGTGGCCACTGAGGTTTCTAGGCTaGGGACCCAGAGCACAGTTAAAGGTTTGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKVALWPLRFLG*GPRAQLKVWRG Trigger: GCCCCGCCAAACCTTTAACTGTGCTCTGGGTCCCAAGCCTAGAAACCTCAGTGGCCACAGTGCTACTTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGTTCATGATCCTGGGTGCCAGTGGTTTTTGCCAGAAGGGAATGTATATTCGCCTACCGCCGTCATaGCCACCACGATCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRFMILGASGFCQKGMYIRLPPS*PPRSPA Trigger: TGCAGGAGATCGTGGTGGCCATGACGGCGGTAGGCG...AATATACATTCCCTTCTGGCAAAAACCACTGGCACCCAGGATCATGAACCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS TCA 90 bp | GGGGGCCGGCTCCCAGCCCGGCGGCGTCGGGTCCACAGCGGCGCCTaGCGGTGGCGCGCATGCAGCCAGCAGCAGCAGCAGCGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGRLPARRRRVHSGA*RWRACSQQQQQRRS Trigger: GCTCCGCCGCTGCTGCTGCTGCTGGCTGCATGCGCGCCACCGTCAGGCGCCGCTGTGGACCCGACGCCGCCGGGCTGGGAGCCGGCCCCC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 90 bp | CGCGGCGCGCCTCTGCAGGAGCCAGGCGCCACTGCAGCAGCACGCTaGGATTGCGCAGGACGTGGGCGCGCAGCGAGCCACCCGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGAPLQEPGATAAAR*DCAGRGRAASHPPR Trigger: CCTCGGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGCAGAGGCGCGCCGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 90 bp | GCGCCTCTGCAGGAGCCAGGCGCCACTGCAGCAGCACGCTGCGATTaGGCAGGACGTGGGCGCGCAGCGAGCCACCCGCCGAGGCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: APLQEPGATAAARCD*AGRGRAASHPPRPT Trigger: CGTTGGCCTCGGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGCAGAGGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 90 bp | GCGAAGACGCGCACGCGGCGCGCCTCTGCAGGAGCCAGGCGCCACTaGAGCAGCACGCTGCGATTGCGCAGGACGTGGGCGCGCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AKTRTRRASAGARRH*SSTLRLRRTWARSE Trigger: CTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGCAGAGGCGCGCCGCGTGCGCGTCTTCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CCA 90 bp | GGAGCCAGGCGCCACTGCAGCAGCACGCTGCGATTGCGCAGGACGTaGGCGCGCAGCGAGCCACCCGCCGAGGCCAACGTTTCGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GARRHCSSTLRLRRT*ARSEPPAEANVSQP Trigger: GGGCTGCGAAACGTTGGCCTCGGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CCA 90 bp | CGCAGCGAGCCACCCGCCGAGGCCAACGTTTCGCAGCCCGGCGTCTaGCAGCGGAAACCCCGAACGGGGCTGCGAAAGCACAGGCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSEPPAEANVSQPGV*QRKPRTGLRKHRRP Trigger: TGGGCGCCTGTGCTTTCGCAGCCCCGTTCGGGGTTTCCGCTGCCAGACGCCGGGCTGCGAAACGTTGGCCTCGGCGGGTGGCTCGCTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CCA 90 bp | CATAGCTGCCGGTTCGGCGGTGAACTCCACGCACTCGGCCAGCTCTaGCGGGACGACGGCGACCTCGGCGCGCAGCGGCAGCTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSCRFGGELHALGQL*RDDGDLGAQRQLLQ Trigger: CTGCAGCAGCTGCCGCTGCGCGCCGAGGTCGCCGTCGTCCCGCCAGAGCTGGCCGAGTGCGTGGAGTTCACCGCCGAACCGGCAGCTATG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 90 bp | ACGTTTCGCAGCCCGGCGTCTGGCAGCGGAAACCCCGAACGGGGCTaGGAAAGCACAGGCGCCCACCGCCCGTCTCTGGGCCCTCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TFRSPASGSGNPERG*ESTGAHRPSLGPRT Trigger: TGTCCGAGGGCCCAGAGACGGGCGGTGGGCGCCTGTGCTTTCGCAGCCCCGTTCGGGGTTTCCGCTGCCAGACGCCGGGCTGCGAAACGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 90 bp | GGAGCCGCCTACCGCCGTCATGGCCACCACGATCTCCTGCATAGCTaGCGGTTCGGCGGTGAACTCCACGCACTCGGCCAGCTCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GAAYRRHGHHDLLHS*RFGGELHALGQLWR Trigger: CCGCCAGAGCTGGCCGAGTGCGTGGAGTTCACCGCCGAACCGGCAGCTATGCAGGAGATCGTGGTGGCCATGACGGCGGTAGGCGGCTCC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 90 bp | ACACAGATGGAGCCGCCTACCGCCGTCATGGCCACCACGATCTCCTaGATAGCTGCCGGTTCGGCGGTGAACTCCACGCACTCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQMEPPTAVMATTIS*IAAGSAVNSTHSAS Trigger: GCTGGCCGAGTGCGTGGAGTTCACCGCCGAACCGGCAGCTATGCAGGAGATCGTGGTGGCCATGACGGCGGTAGGCGGCTCCATCTGTGT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS TCA 72 bp | CTCCCAGCCCGGCGGCGTCGGGTCCACAGCGGCGCCTaGCGGTGGCGCGCATGCAGCCAGCAGCAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPARRRRVHSGA*RWRACSQQQQQ Trigger: CTGCTGCTGCTGCTGGCTGCATGCGCGCCACCGTCAGGCGCCGCTGTGGACCCGACGCCGCCGGGCTGGGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 72 bp | CAGGAGCCAGGCGCCACTGCAGCAGCACGCTGCGATTaGGCAGGACGTGGGCGCGCAGCGAGCCACCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QEPGATAAARCD*AGRGRAASHPP Trigger: CGGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 72 bp | CGCACGCGGCGCGCCTCTGCAGGAGCCAGGCGCCACTaGAGCAGCACGCTGCGATTGCGCAGGACGTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RTRRASAGARRH*SSTLRLRRTWA Trigger: CGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGCAGAGGCGCGCCGCGTGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CCA 72 bp | CGGTTCGGCGGTGAACTCCACGCACTCGGCCAGCTCTaGCGGGACGACGGCGACCTCGGCGCGCAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RFGGELHALGQL*RDDGDLGAQRQ Trigger: CTGCCGCTGCGCGCCGAGGTCGCCGTCGTCCCGCCAGAGCTGGCCGAGTGCGTGGAGTTCACCGCCGAACCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CAA 72 bp | GCAGGAGCCAGGCGCCACTGCAGCAGCACGCTGCGATaGCGCAGGACGTGGGCGCGCAGCGAGCCACCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGARRHCSSTLR*RRTWARSEPPA Trigger: GGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CAA 90 bp | CGCGCCTCTGCAGGAGCCAGGCGCCACTGCAGCAGCACGCTGCGATaGCGCAGGACGTGGGCGCGCAGCGAGCCACCCGCCGAGGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RASAGARRHCSSTLR*RRTWARSEPPAEAN Trigger: GTTGGCCTCGGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGCAGAGGCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 72 bp | AGCCCGGCGTCTGGCAGCGGAAACCCCGAACGGGGCTaGGAAAGCACAGGCGCCCACCGCCCGTCTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPASGSGNPERG*ESTGAHRPSLG Trigger: GCCCAGAGACGGGCGGTGGGCGCCTGTGCTTTCGCAGCCCCGTTCGGGGTTTCCGCTGCCAGACGCCGGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 72 bp | CCTCTGCAGGAGCCAGGCGCCACTGCAGCAGCACGCTaGGATTGCGCAGGACGTGGGCGCGCAGCGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLQEPGATAAAR*DCAGRGRAASH Trigger: GTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCGCCTGGCTCCTGCAGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CCA 72 bp | GGGGCTGCGAAAGCACAGGCGCCCACCGCCCGTCTCTaGGCCCTCGGACAGCACCTTGTAGGGGCACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAAKAQAPTARL*ALGQHLVGAPG Trigger: CCCTGGTGCCCCTACAAGGTGCTGTCCGAGGGCCCAGAGACGGGCGGTGGGCGCCTGTGCTTTCGCAGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS CCA 72 bp | CGCCACTGCAGCAGCACGCTGCGATTGCGCAGGACGTaGGCGCGCAGCGAGCCACCCGCCGAGGCCAACGTT | + |
|
Preference number: 6 (lower is better) Translates to: RHCSSTLRLRRT*ARSEPPAEANV Trigger: AACGTTGGCCTCGGCGGGTGGCTCGCTGCGCGCCCACGTCCTGCGCAATCGCAGCGTGCTGCTGCAGTGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
||
| CDS GCA 72 bp | GAGCCGCCTACCGCCGTCATGGCCACCACGATCTCCTaGATAGCTGCCGGTTCGGCGGTGAACTCCACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: EPPTAVMATTIS*IAAGSAVNSTH Trigger: GTGCGTGGAGTTCACCGCCGAACCGGCAGCTATGCAGGAGATCGTGGTGGCCATGACGGCGGTAGGCGGCTC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099265.3 |
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