RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026193

Ensembl transcript IDs: ENSMUST00000055226.13, ENSMUST00000186129.7, ENSMUST00000186613.2, ENSMUST00000186736.2, ENSMUST00000186940.7, ENSMUST00000186985.2, ENSMUST00000187627.2, ENSMUST00000187938.7, ENSMUST00000188674.7, ENSMUST00000188894.7, ENSMUST00000189821.7, ENSMUST00000190780.7

Found 1131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCACGGGGCGCCTGCCATGACACCAGCAAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGGATGGTGCGTCGATGGCGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: WHGAPAMTPARSWVW*SGTAGWMVRRWRWR
Trigger: CCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 90 bp TCCTGGCACGGGGCGCCTGCCATGACACCAGCAAGGAGTTGGGTGTaGTGGTCAGGAACCGCAGGTTGGATGGTGCGTCGATGGCGGTGG +
Preference number: 1 (lower is better)
Translates to: SWHGAPAMTPARSWV*WSGTAGWMVRRWRW
Trigger: CCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR GCA 90 bp CAGCAAGGAGTTGGGTGTGGTGGTCAGGAACCGCAGGTTGGATGGTaGGTCGATGGCGGTGGAGGCATCGATGATCACGGGCGAGCTCCG +
Preference number: 1 (lower is better)
Translates to: QQGVGCGGQEPQVGW*VDGGGGIDDHGRAP
Trigger: CGGAGCTCGCCCGTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 90 bp CACCAGCAAGGAGTTGGGTGTGGTGGTCAGGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGAGGCATCGATGATCACGGGCGAGCT +
Preference number: 1 (lower is better)
Translates to: HQQGVGCGGQEPQVG*CVDGGGGIDDHGRA
Trigger: AGCTCGCCCGTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR TCA 90 bp GGAACCGCAGGTTGGATGGTGCGTCGATGGCGGTGGAGGCATCGATaGTCACGGGCGAGCTCCGGGCATTGTCGTTCAGAGTGTACAGGT +
Preference number: 1 (lower is better)
Translates to: GTAGWMVRRWRWRHR*SRASSGHCRSECTG
Trigger: ACCTGTACACTCTGAACGACAATGCCCGGAGCTCGCCCGTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR TCA 90 bp GTCCTGTGGGAGGGGTGTTTGAACACACAGCCACAGGCCATGTCCTaGCAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: VLWEGCLNTQPQAMS*QCCRSDGKRKQRCL
Trigger: CAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAACACCCCTCCCACAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR TCA 90 bp ATACTTGATAATGTAGCCAGTAATCCTGGCACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGGTGTGGTGGTCAGGAACCGCAGGTT +
Preference number: 1 (lower is better)
Translates to: ILDNVASNPGTGRLP*HQQGVGCGGQEPQV
Trigger: AACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAGGATTACTGGCTACATTATCAAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR TCA 90 bp CTCCTCTCCAATGGCGTAATGGGAAACCGTGTAAGGGTCAAAGCATaGGTCATCTGTAGGCTGGTTCAGGCCTTCGCTGACAGCGTTGCC +
Preference number: 1 (lower is better)
Translates to: LLSNGVMGNRVRVKA*VICRLVQAFADSVA
Trigger: GGCAACGCTGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTCATGCTTTGACCCTTACACGGTTTCCCATTACGCCATTGGAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR GCA 90 bp AGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGGTTCTGCAGTaGCTCCACTATGATGTTGTAGGTGACCCCTCTGGTAAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: SHNLFPNLVPPLVLQ*LHYDVVGDPSGKAS
Trigger: ACTGGCCTTACCAGAGGGGTCACCTACAACATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR CCA 90 bp AACATCCGGGCTGATGCTCCTCTGAACTGGGGTCTGGCCATTGGCTaGGATGGCATCGACTTGGAAGCCAGTGATTGTCTCTGTCTTTGT +
Preference number: 1 (lower is better)
Translates to: NIRADAPLNWGLAIG*DGIDLEASDCLCLC
Trigger: ACAAAGACAGAGACAATCACTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCCGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 90 bp TGTAATGGTGTAGCTTCTAACATCCGGGCTGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGGGATGGCATCGACTTGGAAGCCAGT +
Preference number: 1 (lower is better)
Translates to: CNGVASNIRADAPLN*GLAIGWDGIDLEAS
Trigger: ACTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCCGGATGTTAGAAGCTACACCATTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 90 bp CTGGTAAGGCCAGTCAGAGTCGCACTGGTAGAAGTTCCAGGAACTTaGAACTGTAAGGGCTCTTCGTCGGTGCCAACTGGTTGGCATGAA +
Preference number: 1 (lower is better)
Translates to: LVRPVRVALVEVPGT*NCKGSSSVPTGWHE
Trigger: TTCATGCCAACCAGTTGGCACCGACGAAGAGCCCTTACAGTTCCAAGTTCCTGGAACTTCTACCAGTGCGACTCTGACTGGCCTTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR CCA 90 bp GCCATACTGCTGGATGCTGATGAGCTGTCCCTCATAGATCACACCTaGGGTCAGGCCTTTGATGGTATAGGAGTTAAGGTGGCCAGGAAT +
Preference number: 1 (lower is better)
Translates to: AILLDADELSLIDHT*GQAFDGIGVKVARN
Trigger: ATTCCTGGCCACCTTAACTCCTATACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAGGGACAGCTCATCAGCATCCAGCAGTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR CCA 90 bp AATAGTGATGGTGGTCTCTGTAGCGTCCGTCACACGGGCCCTTCTTaGAGGGCTAACATCTGTGTAGGAGCAGAGCCAGAGATTAAAGCA +
Preference number: 1 (lower is better)
Translates to: NSDGGLCSVRHTGPS*RANICVGAEPEIKA
Trigger: TGCTTTAATCTCTGGCTCTGCTCCTACACAGATGTTAGCCCTCCAAGAAGGGCCCGTGTGACGGACGCTACAGAGACCACCATCACTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR TCA 90 bp ACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTaGCTTTCCTGCTCAAGGTCTTGGGTACTAGCATTCAGTACATTT +
Preference number: 1 (lower is better)
Translates to: TVLQVRWQKKAEVSG*LSCSRSWVLAFSTF
Trigger: AAATGTACTGAATGCTAGTACCCAAGACCTTGAGCAGGAAAGTCACCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR TCA 90 bp GGCTCCAGACCAGTAATGGTGGCCTCCGTGACACCAGGGCGGGGCCGAGGGACCACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GSRPVMVASVTPGRGRGTTGRLP*HQQGVG
Trigger: CCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGT...GGTCCCTCGGCCCCGCCCTGGTGTCACGGAGGCCACCATTACTGGTCTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR CCA 90 bp CAGACCAGTAATGGTGGCCTCCGTGACACCAGGGCGGGGCCGAGGGACCACTTCGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGA +
Preference number: 2 (lower is better)
Translates to: QTSNGGLRDTRAGPRDHFEPQVG*CVDGGG
Trigger: TCCACCGCCATCGACGCACCATCCAACCTGCGGTTC...GAAGTGGTCCCTCGGCCCCGCCCTGGTGTCACGGAGGCCACCATTACTGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR CCA 90 bp CTCGGTTCCTGGCTCCAGACCAGTAATGGTGGCCTCCGTGACACCAGGGCGGGGGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LGSWLQTSNGGLRDTRAGDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...CCCCGCCCTGGTGTCACGGAGGCCACCATTACTGGTCTGGAGCCAGGAACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CAA 90 bp CCAGTAATCCTGGCACGGGGCGCCTGCCATGACACCAGCAAGGAGTaGGGTGTGGTGGTCAGGAACCGCAGGTTGGATGGTGCGTCGATG +
Preference number: 2 (lower is better)
Translates to: PVILARGACHDTSKE*GVVVRNRRLDGASM
Trigger: CATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAGGATTACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CAA 90 bp CATGACACCAGCAAGGAGTTGGGTGTGGTGGTCAGGAACCGCAGGTaGGATGGTGCGTCGATGGCGGTGGAGGCATCGATGATCACGGGC +
Preference number: 2 (lower is better)
Translates to: HDTSKELGVVVRNRR*DGASMAVEASMITG
Trigger: GCCCGTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR GCA 90 bp GCGCAGTCTCTCCGGTCACCGTGTTGCTGGTCACAGGGGTGCTGGCGCTGGTGGTCTCTGTGGCCATACTaGTGGATGCTGATGAGCTGT +
Preference number: 2 (lower is better)
Translates to: AQSLRSPCCWSQGCWRWWSLWPY*WMLMSC
Trigger: ACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGA...CCACCAGCGCCAGCACCCCTGTGACCAGCAACACGGTGACCGGAGAGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR-3UTR TCA 90 bp CGAGCTCCGGGCATTGTCGTTCAGAGTGTACAGGTGGATCTTGTAGTCAGTGCCGGGCTGATGCTCCTCTaGACTGGGGTCTGGCCATTG +
Preference number: 2 (lower is better)
Translates to: RAPGIVVQSVQVDLVVSAGLMLL*TGVWPL
Trigger: CAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCC...GGCACTGACTACAAGATCCACCTGTACACTCTGAACGACAATGCCCGGAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CAA 90 bp AAGCATGAGTCATCTGTAGGCTGGTTCAGGCCTTCGCTGACAGCGTaGCCCACAGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: KHESSVGWFRPSLTA*PTVTTSSRTLCLLW
Trigger: CCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTCATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR CCA 90 bp CAGGAACCGCAGGTTGGATGGTGCGTCGATGGCGGTGGAGGCATCGATGATCACGGGATGGCATCGACTTaGAAGCCAGTGATTGTCTCT +
Preference number: 2 (lower is better)
Translates to: QEPQVGWCVDGGGGIDDHGMAST*KPVIVS
Trigger: AGAGACAATCACTGGCTTCCAAGTCGATGCCATCCC...GTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR GCA 90 bp TGTGCAGCTCATCCGCTGGCCATTTTCTCCCTGCCGATCCCACTTCTCTCCGATTCTTCCCGAACCTTGTaGCTCCTCTGGTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: CAAHPLAIFSLPIPLLSDSSRTL*LLWFCS
Trigger: ACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGA...ATCGGAGAGAAGTGGGATCGGCAGGGAGAAAATGGCCAGCGGATGAGCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR CCA 90 bp CTGGTGGTGAAGTCGAAGCGTGTCACTTCTCTGTGGCCATACTGCTGGATGCTGCTCATAGATCACACCTaGGGTCAGGCCTTTGATGGT +
Preference number: 2 (lower is better)
Translates to: LVVKSKRVTSLWPYCWMLLIDHT*GQAFDG
Trigger: ACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAG...CAGCATCCAGCAGTATGGCCACAGAGAAGTGACACGCTTCGACTTCACCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR CAA 90 bp GCTCCTCTGAACTGGGGTCTGGCCATTGGCTGGGATGGCATCGACTaGGAAGCCAGTGATTGTCTCTGTCTTTGTTCTCCAGCTAATAGT +
Preference number: 2 (lower is better)
Translates to: APLNWGLAIGWDGID*EASDCLCLCSPANS
Trigger: ACTATTAGCTGGAGAACAAAGACAGAGACAATCACTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGTTCAGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR TCA 90 bp CGAGCTCCGGGCATTGTCGTTCAGAGTGTACAGGTGGATCTTGTAGTCAGTGCCCGACTTGGAAGCCAGTaGTTGTCTCTGTCTTTGTTC +
Preference number: 2 (lower is better)
Translates to: RAPGIVVQSVQVDLVVSARLGSQ*LSLSLF
Trigger: GAACAAAGACAGAGACAATCACTGGCTTCCAAGTCG...GGCACTGACTACAAGATCCACCTGTACACTCTGAACGACAATGCCCGGAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR CCA 90 bp CTGTTCTCCTACATGGTAGGTCTTCCCATCGTCATAGCACGTTGCTTCATGGGGGAGTCATCTGTAGGCTaGTTCAGGCCTTCGCTGACA +
Preference number: 2 (lower is better)
Translates to: LFSYMVGLPIVIARCFMGESSVG*FRPSLT
Trigger: TGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTC...CCCCATGAAGCAACGTGCTATGACGATGGGAAGACCTACCATGTAGGAGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACCAACTGTCACCATTaGGGAGAGAAGTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTNCHH*GEKSQN
Trigger: GTTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR GCA 90 bp ACTGTTCTCCTACATGGTAGGTCTTCCCATCGTCATAGCACGTTGCTTCATGGGTGCCTCCTCTGGTTCTaGAGTGCCTCCACTATGATG +
Preference number: 2 (lower is better)
Translates to: TVLLHGRSSHRHSTLLHGCLLWF*SASTMM
Trigger: CATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCA...CCCATGAAGCAACGTGCTATGACGATGGGAAGACCTACCATGTAGGAGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR CCA 90 bp CCGAACCTTGTGCCTCCTCTGGTTCTGCAGTGCCTCCACTATGATGTTGTAGGTGAAGTTCCAGGAACTTaGAACTGTAAGGGCTCTTCG +
Preference number: 2 (lower is better)
Translates to: PNLVPPLVLQCLHYDVVGEVPGT*NCKGSS
Trigger: CGAAGAGCCCTTACAGTTCCAAGTTCCTGGAACTTC...ACCTACAACATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGACCAACTGTCACCATTaGGGAGAGAAGTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGTNCHH*GEKSQN
Trigger: GTTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAACCAACTGTCACCATTaGGGAGAGAAGTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQTNCHH*GEKSQN
Trigger: GTTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CCA 90 bp TACATGGTAGGTCTTCCCATCGTCATAGCACGTTGCTTCATGGGGATCACACTTCCAAAGCCCAAGCACTaGCATGTGAGCTTAAAGCCA +
Preference number: 2 (lower is better)
Translates to: YMVGLPIVIARCFMGITLPKPKH*HVSLKP
Trigger: TGGCTTTAAGCTCACATGCCAGTGCTTGGGCTTTGG...AAGTGTGATCCCCATGAAGCAACGTGCTATGACGATGGGAAGACCTACCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR CAA 90 bp GTAATGGTGGCCTCCGTGACACCAGGGCGGGGCCGAGGGACCACTTCTCTGGGAACTGGGGTCTGGCCATaGGCTGGGATGGCATCGACT +
Preference number: 3 (lower is better)
Translates to: VMVASVTPGRGRGTTSLGTGVWP*AGMAST
Trigger: AGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGT...TCCCAGAGAAGTGGTCCCTCGGCCCCGCCCTGGTGTCACGGAGGCCACCATTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR GCA 72 bp GTTGGGTGTGGTGGTCAGGAACCGCAGGTTGGATGGTaGGTCGATGGCGGTGGAGGCATCGATGATCACGGG +
Preference number: 3 (lower is better)
Translates to: VGCGGQEPQVGW*VDGGGGIDDHG
Trigger: CCCGTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 72 bp GCGCCTGCCATGACACCAGCAAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGGATGGTGCGTCGATGG +
Preference number: 3 (lower is better)
Translates to: APAMTPARSWVW*SGTAGWMVRRW
Trigger: CCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATGGCAGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 72 bp GGAGTTGGGTGTGGTGGTCAGGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGAGGCATCGATGATCAC +
Preference number: 3 (lower is better)
Translates to: GVGCGGQEPQVG*CVDGGGGIDDH
Trigger: GTGATCATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR TCA 72 bp CCGTGTTGCTGGTCACAGGGGTGCTGGCGCTGGTGGTaGAGTCGAAGCGTGTCACTTCTCTGTGGCCATACT +
Preference number: 3 (lower is better)
Translates to: PCCWSQGCWRWW*SRSVSLLCGHT
Trigger: AGTATGGCCACAGAGAAGTGACACGCTTCGACTTCACCACCAGCGCCAGCACCCCTGTGACCAGCAACACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR CCA 72 bp GGTGGTCTCTGTAGCGTCCGTCACACGGGCCCTTCTTaGAGGGCTAACATCTGTGTAGGAGCAGAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GGLCSVRHTGPS*RANICVGAEPE
Trigger: CTCTGGCTCTGCTCCTACACAGATGTTAGCCCTCCAAGAAGGGCCCGTGTGACGGACGCTACAGAGACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 72 bp CCCTTTCCATTCCCGAGGCATGTGCAGCTCATCCGCTaGCCATTTTCTCCCTGCCGATCCCACTTCTCTCCG +
Preference number: 3 (lower is better)
Translates to: PFPFPRHVQLIR*PFSPCRSHFSP
Trigger: CGGAGAGAAGTGGGATCGGCAGGGAGAAAATGGCCAGCGGATGAGCTGCACATGCCTCGGGAATGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR TCA 72 bp AATGTAGCCAGTAATCCTGGCACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGGTGTGGTGGTCAGGAA +
Preference number: 3 (lower is better)
Translates to: NVASNPGTGRLP*HQQGVGCGGQE
Trigger: TTCCTGACCACCACACCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAGGATTACTGGCTACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR GCA 72 bp GCGTTGCCCACAGTCACAACCTCTTCCCGAACCTTGTaGCTCCTCTGGTTCTGCAGTGCCTCCACTATGATG +
Preference number: 3 (lower is better)
Translates to: ALPTVTTSSRTL*LLWFCSASTMM
Trigger: CATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR CCA 72 bp GCGCTGGTGGTGAAGTCGAAGCGTGTCACTTCTCTGTaGCCATACTGCTGGATGCTGATGAGCTGTCCCTCA +
Preference number: 3 (lower is better)
Translates to: ALVVKSKRVTSL*PYCWMLMSCPS
Trigger: TGAGGGACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGAAGTGACACGCTTCGACTTCACCACCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR CCA 72 bp GCTGATGCTCCTCTGAACTGGGGTCTGGCCATTGGCTaGGATGGCATCGACTTGGAAGCCAGTGATTGTCTC +
Preference number: 3 (lower is better)
Translates to: ADAPLNWGLAIG*DGIDLEASDCL
Trigger: GAGACAATCACTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 72 bp GTAGCTTCTAACATCCGGGCTGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGGGATGGCATCGACTTG +
Preference number: 3 (lower is better)
Translates to: VASNIRADAPLN*GLAIGWDGIDL
Trigger: CAAGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCCGGATGTTAGAAGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 72 bp CTTCAGGGCAATGACGTAGATGGTGTACTCGGTTCCTaGCTCCAGACCAGTAATGGTGGCCTCCGTGACACC +
Preference number: 3 (lower is better)
Translates to: LQGNDVDGVLGS*LQTSNGGLRDT
Trigger: GGTGTCACGGAGGCCACCATTACTGGTCTGGAGCCAGGAACCGAGTACACCATCTACGTCATTGCCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR GCA 72 bp CTCTTCCCGAACCTTGTGCCTCCTCTGGTTCTGCAGTaGCTCCACTATGATGTTGTAGGTGACCCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: LFPNLVPPLVLQ*LHYDVVGDPSG
Trigger: ACCAGAGGGGTCACCTACAACATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR CCA 72 bp AGCCAGCGTCAGACAACCGCTCCCACTCCTCTCCAATaGCGTAATGGGAAACCGTGTAAGGGTCAAAGCATG +
Preference number: 3 (lower is better)
Translates to: SQRQTTAPTPLQ*RNGKPCKGQSM
Trigger: CATGCTTTGACCCTTACACGGTTTCCCATTACGCCATTGGAGAGGAGTGGGAGCGGTTGTCTGACGCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR CAA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCACTGGGGTGTGGATaGACCTTGGTAGAGAGACAC +
Preference number: 3 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSLGCG*TLVERH
Trigger: GTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CAA 90 bp CGAGCTCCGGGCATTGTCGTTCAGAGTGTACAGGTGGATCTTGTAGTCAGTGCCTGGGATGGCATCGACTaGGAAGCCAGTGATTGTCTC +
Preference number: 3 (lower is better)
Translates to: RAPGIVVQSVQVDLVVSAWDGID*EASDCL
Trigger: GAGACAATCACTGGCTTCCAAGTCGATGCCATCCCA...GGCACTGACTACAAGATCCACCTGTACACTCTGAACGACAATGCCCGGAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR TCA 72 bp GAGGGGTGTTTGAACACACAGCCACAGGCCATGTCCTaGCAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: EGCLNTQPQAMS*QCCRSDGKRKQ
Trigger: CTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAACACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR TCA 72 bp TTGTTGGGACAAAGTGAGTCCTGTGGGAGGGGTGTTTaGACACACAGCCACAGGCCATGTCCTGACAGTGCT +
Preference number: 3 (lower is better)
Translates to: LLGQSESCGRGV*THSHRPCPDSA
Trigger: AGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAACACCCCTCCCACAGGACTCACTTTGTCCCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR CCA 72 bp ACTGGGGTCTGGCCATTGGCTGGGATGGCATCGACTTaGAAGCCAGTGATTGTCTCTGTCTTTGTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: TGVWPLAGMAST*KPVIVSVFVLQ
Trigger: CTGGAGAACAAAGACAGAGACAATCACTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR CCA 72 bp CCAGTCAGAGTCGCACTGGTAGAAGTTCCAGGAACTTaGAACTGTAAGGGCTCTTCGTCGGTGCCAACTGGT +
Preference number: 3 (lower is better)
Translates to: PVRVALVEVPGT*NCKGSSSVPTG
Trigger: ACCAGTTGGCACCGACGAAGAGCCCTTACAGTTCCAAGTTCCTGGAACTTCTACCAGTGCGACTCTGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR-3UTR CAA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCACTGGGGTGTGGATaGACCTTGGTAGAGAGACAC +
Preference number: 3 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSLGCG*TLVERH
Trigger: GTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CAA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCACTGGGGTGTGGATaGACCTTGGTAGAGAGACAC +
Preference number: 3 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSLGCG*TLVERH
Trigger: GTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR TCA 72 bp ACCCTGAAGCAGAACAGGGTGACCAACTGTCACCATTaGGGAGAGAAGTCTCAAAACATCCCACGGGGCGAT +
Preference number: 3 (lower is better)
Translates to: TLKQNRVTNCHH*GEKSQNIPRGD
Trigger: ATCGCCCCGTGGGATGTTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGTCACCCTGTTCTGCTTCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR TCA 72 bp TCAGGGGCTCACTCTTCTGATTGTTCTTCAGGGCAATaGCGTAGATGGTGTACTCGGTTCCTGGCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: SGAHSSDCSSGQ*RRWCTRFLAPD
Trigger: GTCTGGAGCCAGGAACCGAGTACACCATCTACGTCATTGCCCTGAAGAACAATCAGAAGAGTGAGCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
3UTR-3UTR CAA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTTCCTGCTCAAGGTCTaGGGTACTAGCATTCAGTAC +
Preference number: 3 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESFLLKV*GTSIQY
Trigger: GTACTGAATGCTAGTACCCAAGACCTTGAGCAGGAA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CAA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGACCAACTGTCACCATaGAGGAGAGAAGTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESDQLSP*RREVSK
Trigger: TTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CAA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATTCCTGCTCAAGGTCTaGGGTACTAGCATTCAGTAC +
Preference number: 3 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQFLLKV*GTSIQY
Trigger: GTACTGAATGCTAGTACCCAAGACCTTGAGCAGGAA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CAA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTTCCTGCTCAAGGTCTaGGGTACTAGCATTCAGTAC +
Preference number: 3 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGFLLKV*GTSIQY
Trigger: GTACTGAATGCTAGTACCCAAGACCTTGAGCAGGAA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR-3UTR CAA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTCCTGCTCAAGGTCTaGGGTACTAGCATTCAGTAC +
Preference number: 3 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVFLLKV*GTSIQY
Trigger: GTACTGAATGCTAGTACCCAAGACCTTGAGCAGGAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR TCA 72 bp AATGGCGTAATGGGAAACCGTGTAAGGGTCAAAGCATaGGTCATCTGTAGGCTGGTTCAGGCCTTCGCTGAC +
Preference number: 3 (lower is better)
Translates to: NGVMGNRVRVKA*VICRLVQAFAD
Trigger: GTCAGCGAAGGCCTGAACCAGCCTACAGATGACTCATGCTTTGACCCTTACACGGTTTCCCATTACGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR CCA 72 bp CTGGATGCTGATGAGCTGTCCCTCATAGATCACACCTaGGGTCAGGCCTTTGATGGTATAGGAGTTAAGGTG +
Preference number: 3 (lower is better)
Translates to: LDADELSLIDHT*GQAFDGIGVKV
Trigger: CACCTTAACTCCTATACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAGGGACAGCTCATCAGCATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR-3UTR CAA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGACCAACTGTCACCATaGAGGAGAGAAGTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQDQLSP*RREVSK
Trigger: TTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR TCA 72 bp CAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTaGCTTTCCTGCTCAAGGTCTTGGGTACTAGCATTC +
Preference number: 3 (lower is better)
Translates to: QVRWQKKAEVSG*LSCSRSWVLAF
Trigger: GAATGCTAGTACCCAAGACCTTGAGCAGGAAAGTCACCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR GCA 72 bp TCCTACATGGTAGGTCTTCCCATCGTCATAGCACGTTaGTTCATGGGGATCACACTTGAATTCTCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: SYMVGLPIVIAR*FMGITLEFSLS
Trigger: GGAAAGGGAGAATTCAAGTGTGATCCCCATGAAGCAACGTGCTATGACGATGGGAAGACCTACCATGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR GCA 90 bp GGCTGGTTCAGGCCTTCGCTGACAGCGTTGCCCACAGTCACAACCTCTTCCCGACTGGCACGGGGCGCCTaGCATGACACCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GWFRPSLTALPTVTTSSRLARGA*HDTSKE
Trigger: CTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAG...TCGGGAAGAGGTTGTGACTGTGGGCAACGCTGTCAGCGAAGGCCTGAACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp ACCAGTAATGGTGGCCTCCGTGACACCAGGGCGGGGCCGAGGGACCACTTCTCTGATGACTCCCTGGGCTaGTCTGCTTGTCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TSNGGLRDTRAGPRDHFSDDSLG*SACQCV
Trigger: GACACACTGACAAGCAGACCAGCCCAGGGAGTCATC...AGAGAAGTGGTCCCTCGGCCCCGCCCTGGTGTCACGGAGGCCACCATTACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCAGCGCCAGCCCCGCTaGCCTCCGAAACACGTGCAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESQRQPR*PPKHVQ
Trigger: CTGCACGTGTTTCGGAGGCCAGCGGGGCTGGCGCTG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
3UTR CAA 72 bp AGCAAGGAGTTGGGTGTGGTGGTCAGGAACCGCAGGTaGGATGGTGCGTCGATGGCGGTGGAGGCATCGATG +
Preference number: 4 (lower is better)
Translates to: SKELGVVVRNRR*DGASMAVEASM
Trigger: CATCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCACACCCAACTCCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTGTCTCCTGGCAGCTaGCGCCATTGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLSPGS*RHCPGT
Trigger: CGTGCCTGGGCAATGGCGTCAGCTGCCAGGAGACAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp GCTCATCCGCTGGCCATTTTCTCCCTGCCGATCCCACTTCTCTCCGATCTTGTAACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: AHPLAIFSLPIPLLSDLVTGRLP*HQQGVG
Trigger: CCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGT...TACAAGATCGGAGAGAAGTGGGATCGGCAGGGAGAAAATGGCCAGCGGATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTGRLP*HQQGVG
Trigger: CCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTGGCACGGGGCGCCTaGCATGACACCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLARGA*HDTSKE
Trigger: CTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCGGTCACCGTGTTGCTaGTCACAGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRSPCC*SQGCWR
Trigger: GCGCCAGCACCCCTGTGACCAGCAACACGGTGACCG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGTGCCTCACCTCCCTaGCTCGGTCGTACACCCAGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGASPP*LGRTPS
Trigger: GCTGGGTGTACGACCGAGCCAGGGAGGTGAGGCACC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CTGACAGCGTTGCCCACAGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGGGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LTALPTVTTSSRTLCLLWEPQVG*CVDGGG
Trigger: TCCACCGCCATCGACGCACCATCCAACCTGCGGTTC...CCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCAGCGCCAGCCCCGCTaGCCTCCGAAACACGTGCAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVQRQPR*PPKHVQ
Trigger: CTGCACGTGTTTCGGAGGCCAGCGGGGCTGGCGCTG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACAGCGCCAGCCCCGCTaGCCTCCGAAACACGTGCAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQQRQPR*PPKHVQ
Trigger: CTGCACGTGTTTCGGAGGCCAGCGGGGCTGGCGCTG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCAGCGCCAGCCCCGCTaGCCTCCGAAACACGTGCAG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGQRQPR*PPKHVQ
Trigger: CTGCACGTGTTTCGGAGGCCAGCGGGGCTGGCGCTG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCAGCCAGGCTTGCTCTaGCTGACAGCCACCGGGGAT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESQPGLL*LTATGD
Trigger: ATCCCCGGTGGCTGTCAGTCAGAGCAAGCCTGGCTG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCACACCACTGTCGGTaGCACAGTGGCCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPHHCR*HSGRRE
Trigger: CTCCCTACGGCCACTGTGTCACCGACAGTGGTGTGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTGTCTCCTGGCAGCTaGCGCCATTGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLSPGS*RHCPGT
Trigger: CGTGCCTGGGCAATGGCGTCAGCTGCCAGGAGACAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTGTCTCCTGGCAGCTaGCGCCATTGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLSPGS*RHCPGT
Trigger: CGTGCCTGGGCAATGGCGTCAGCTGCCAGGAGACAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTGTCTCCTGGCAGCTaGCGCCATTGCCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLSPGS*RHCPGT
Trigger: CGTGCCTGGGCAATGGCGTCAGCTGCCAGGAGACAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CAGCGTTGCCCACAGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGGTTCTGGGCTGATGCTCCTCTaGACTGGGGTCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: QRCPQSQPLPEPCASSGSGLMLL*TGVWPL
Trigger: CAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCC...AGAACCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQTGRLP*HQQGVG
Trigger: CCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVTGRLP*HQQGVG
Trigger: CCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCCGGTCACCGTGTTaGTGGTCACAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLRSPC*WSQGCW
Trigger: CCAGCACCCCTGTGACCAGCAACACGGTGACCGGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTTGACAGGCAGCCTCTaGCCATGTTCCCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLTGSL*PCSPGR
Trigger: CCTGCCCGGGGAACATGGGCAGAGGCTGCCTGTCAA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCCCGGCCTGAGGCCCTaGAGCTCTGCAGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVPGLRP*SSAVSS
Trigger: AGACGACACTGCAGAGCTGCAGGGCCTCAGGCCGGG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCCGGCCTGAGGCCCTaGAGCTCTGCAGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPGLRP*SSAVSS
Trigger: AGACGACACTGCAGAGCTGCAGGGCCTCAGGCCGGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTGGCACGGGGCGCCTaGCATGACACCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLARGA*HDTSKE
Trigger: CTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTGGCACGGGGCGCCTaGCATGACACCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLARGA*HDTSKE
Trigger: CTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTGGCACGGGGCGCCTaGCATGACACCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLARGA*HDTSKE
Trigger: CTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACGGTCACCGTGTTGCTaGTCACAGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRSPCC*SQGCWR
Trigger: GCGCCAGCACCCCTGTGACCAGCAACACGGTGACCG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCGGTCACCGTGTTGCTaGTCACAGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRSPCC*SQGCWR
Trigger: GCGCCAGCACCCCTGTGACCAGCAACACGGTGACCG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGTGCCTCACCTCCCTaGCTCGGTCGTACACCCAGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGASPP*LGRTPS
Trigger: GCTGGGTGTACGACCGAGCCAGGGAGGTGAGGCACC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGTGCCTCACCTCCCTaGCTCGGTCGTACACCCAGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGASPP*LGRTPS
Trigger: GCTGGGTGTACGACCGAGCCAGGGAGGTGAGGCACC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGTGCCTCACCTCCCTaGCTCGGTCGTACACCCAGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGASPP*LGRTPS
Trigger: GCTGGGTGTACGACCGAGCCAGGGAGGTGAGGCACC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CGGGCTGATGCTCCTCTGAACTGGGGTCTGGCCATTGGCTGGGATGGCATCGACGTAGTGATGACTCCCTaGGCTGGTCTGCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RADAPLNWGLAIGWDGIDVVMTP*AGLLVS
Trigger: ACTGACAAGCAGACCAGCCCAGGGAGTCATCACTAC...GTCGATGCCATCCCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
CDS-3UTR CCA 90 bp CTGACAGCGTTGCCCACAGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGGGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTALPTVTTSSRTLCLLWDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...CCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCAGCCAGGCTTGCTCTaGCTGACAGCCACCGGGGAT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVQPGLL*LTATGD
Trigger: ATCCCCGGTGGCTGTCAGTCAGAGCAAGCCTGGCTG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACAGCCAGGCTTGCTCTaGCTGACAGCCACCGGGGAT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQQPGLL*LTATGD
Trigger: ATCCCCGGTGGCTGTCAGTCAGAGCAAGCCTGGCTG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCCACACCACTGTCGGTaGCACAGTGGCCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGPHHCR*HSGRRE
Trigger: CTCCCTACGGCCACTGTGTCACCGACAGTGGTGTGG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGGCTGATGCTCCTCTaGACTGGGGTCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGLMLL*TGVWPL
Trigger: CAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCTGAGCCTGCCTCTTaGTCTTCCCGGCTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVAEPAS*SSRLRC
Trigger: GCACCGAAGCCGGGAAGAGCAAGAGGCAGGCTCAGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCTGAGCCTGCCTCTTaGTCTTCCCGGCTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQAEPAS*SSRLRC
Trigger: GCACCGAAGCCGGGAAGAGCAAGAGGCAGGCTCAGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCTGAGCCTGCCTCTTaGTCTTCCCGGCTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGAEPAS*SSRLRC
Trigger: GCACCGAAGCCGGGAAGAGCAAGAGGCAGGCTCAGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCTGGGAGTAGGGGATaGAGGCCCATTCTCCACGAC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESAGSRG*RPILHD
Trigger: GTCGTGGAGAATGGGCCTGCATCCCCTACTCCCAGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGTCACACTTCCATCTaGCCCGGCCCTGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGHTSI*PGPDQS
Trigger: GCTTTGGTCAGGGCCGGGGCAGATGGAAGTGTGACC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGTGCCACTCCCCGATaGCACGGCCGTAGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSATPR*HGRSSN
Trigger: GTTACTGCTACGGCCGTGGCATCGGGGAGTGGCACT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCCGGTCACCGTGTTaGTGGTCACAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLRSPC*WSQGCW
Trigger: CCAGCACCCCTGTGACCAGCAACACGGTGACCGGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTCCGGTCACCGTGTTaGTGGTCACAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLRSPC*WSQGCW
Trigger: CCAGCACCCCTGTGACCAGCAACACGGTGACCGGAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATTGACAGGCAGCCTCTaGCCATGTTCCCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLTGSL*PCSPGR
Trigger: CCTGCCCGGGGAACATGGGCAGAGGCTGCCTGTCAA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTGACAGGCAGCCTCTaGCCATGTTCCCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLTGSL*PCSPGR
Trigger: CCTGCCCGGGGAACATGGGCAGAGGCTGCCTGTCAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGTCAGTCGGTAGCCTaGTATACGGGCTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGQSVA*YTGSRW
Trigger: CCACCTCGAGCCCGTATAGCAGGCTACCGACTGACC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAGTCACTTCTCGGGGTaGCTCACCTCCCTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSHFSG*LTSLAR
Trigger: CCGAGCCAGGGAGGTGAGGCACCCCGAGAAGTGACT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAGTCACTTCTCGGGGTaGCTCACCTCCCTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQSHFSG*LTSLAR
Trigger: CCGAGCCAGGGAGGTGAGGCACCCCGAGAAGTGACT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGAGGTCCCCTGCTaGCCGTTCGTGGGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESREVPC*PFVGVV
Trigger: TACTACCCCCACGAACGGGCAGCAGGGGACCTCTCT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCCACCAGTCTCATGTaGCCTCCTCCACTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESATSLM*PPPLVA
Trigger: GGCGACAAGTGGAGGAGGCCACATGAGACTGGTGGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp GAAGCGTGTCACTTCTCTGTGGCCATACTGCTGGATGCTGATGAGCTGTCCCTCTCCGGGGCATTCCACTaGATGGGGTGGGAATTGGGC +
Preference number: 4 (lower is better)
Translates to: EACHFSVAILLDADELSLSGAFH*MGWELG
Trigger: GCCCAATTCCCACCCCATCCAGTGGAATGCCCCGGA...GAGGGACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGAAGTGACACGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCCGGGGCATTCCACTaGATGGGGTGGGAATTGGGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSGAFH*MGWELG
Trigger: GCCCAATTCCCACCCCATCCAGTGGAATGCCCCGGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTTGCTGGCCAATCAGTaGCGGGCTCTCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLLANQ*RALLSA
Trigger: GGCAGAGAGGAGAGCCCGCCACTGATTGGCCAGCAA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGGCTTGCTGCTTGCTaGACTGTCCCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESWLAAC*TVPTAS
Trigger: ACTGGCCGTGGGGACAGTCCAGCAAGCAGCAAGCCA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESEPQVG*CVDGGG
Trigger: TCCACCGCCATCGACGCACCATCCAACCTGCGGTTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CTGCCAAAGCCCAAGCACTGGCATGTGAGCTTAAAGCCAGCGTCAGACAACCGCAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LPKPKHWHVSLKPASDNRRSWVW*SGTAGW
Trigger: CCAACCTGCGGTTCCTGACCACCACACCCAACTCCT...GCGGTTGTCTGACGCTGGCTTTAAGCTCACATGCCAGTGCTTGGGCTTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCGGCAGGTATGGTCTTaGCCTAAGCCTGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRQVWS*PKPDGG
Trigger: ACCCCCGTCAGGCTTAGGCCAAGACCATACCTGCCG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGTAGGTGTGGCCGGTaGTGCCATCGGGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCRCGR*CHRDWV
Trigger: AACCCAGTCCCGATGGCACCACCGGCCACACCTACA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACAGGCTTGCTCTGACTaGCAGCCACCGGGGATTGAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQQACSD*QPPGIE
Trigger: CTCAATCCCCGGTGGCTGTCAGTCAGAGCAAGCCTG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTTGCAATGGTACAGCTaGTCCTGCCTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLQWYS*SCLSQP
Trigger: GGGCTGGGAGAGGCAGGATCAGCTGTACCATTGCAA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAGCGGGGGTCCAGGTaGTCACAATTGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESERGSR*SQLWSL
Trigger: CAGAGACCACAATTGTGATCACCTGGACCCCCGCTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTCGTACACCCAGCTTaGAGCCAATCCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVVHPA*SQSLER
Trigger: CCGCTCCAAGGATTGGCTTCAAGCTGGGTGTACGAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCAAAGCTTAGGTCAGTaGGCTGGGGCACCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESQSLGQ*AGAPLG
Trigger: TCCCAGAGGTGCCCCAGCTCACTGACCTAAGCTTTG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000055226.13
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGCTTCCGGGCACAGTaGACTCCTGGACAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCFRAQ*TPGQGY
Trigger: ATAGCCCTGTCCAGGAGTTCACTGTGCCCGGAAGCA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCAAGGCAACCACACTaGCTGTGTACTCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESARQPH*LCTQTP
Trigger: CGGGGTCTGAGTACACAGTCAGTGTGGTTGCCTTGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGGCTGATGCTCCTCTaGACTGGGGTCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGLMLL*TGVWPL
Trigger: CAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGGCTGATGCTCCTCTaGACTGGGGTCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGLMLL*TGVWPL
Trigger: CAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGACGGGGCGCCTGCCATaGCACCAGCAAGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGTGRLP*HQQGVG
Trigger: CCCAACTCCTTGCTGGTGTCATGGCAGGCGCCCCGT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCTCCCAGCCCCGATaGAGGTACAGTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLSQPR*RYSPRS
Trigger: TGATCTGGGACTGTACCTGCATCGGGGCTGGGAGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCCGCCCTTCGGTGGTaGAGGAATAGAAGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESAALRW*RNRRSY
Trigger: GTAGGACCTTCTATTCCTGCACCACCGAAGGGCGGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCACAGATGTCCGTCTTaGCGCCCTTCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGHRCPS*RPSVVQ
Trigger: CTGCACCACCGAAGGGCGGCAAGACGGACATCTGTG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCACAGATGTCCGTCTTaGCGCCCTTCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVHRCPS*RPSVVQ
Trigger: CTGCACCACCGAAGGGCGGCAAGACGGACATCTGTG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACACAGATGTCCGTCTTaGCGCCCTTCGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQHRCPS*RPSVVQ
Trigger: CTGCACCACCGAAGGGCGGCAAGACGGACATCTGTG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCGTTCCCCACACACGTaGACCTCATCATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRSPHT*TSSCGP
Trigger: TGGGCCACATGATGAGGTGCACGTGTGTGGGGAACG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCTGGGAGTAGGGGATaGAGGCCCATTCTCCACGAC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQAGSRG*RPILHD
Trigger: GTCGTGGAGAATGGGCCTGCATCCCCTACTCCCAGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCTGGGAGTAGGGGATaGAGGCCCATTCTCCACGAC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVAGSRG*RPILHD
Trigger: GTCGTGGAGAATGGGCCTGCATCCCCTACTCCCAGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGTCACACTTCCATCTaGCCCGGCCCTGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGHTSI*PGPDQS
Trigger: GCTTTGGTCAGGGCCGGGGCAGATGGAAGTGTGACC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGTCACACTTCCATCTaGCCCGGCCCTGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGHTSI*PGPDQS
Trigger: GCTTTGGTCAGGGCCGGGGCAGATGGAAGTGTGACC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGTCACACTTCCATCTaGCCCGGCCCTGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGHTSI*PGPDQS
Trigger: GCTTTGGTCAGGGCCGGGGCAGATGGAAGTGTGACC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAGTGCCACTCCCCGATaGCACGGCCGTAGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQSATPR*HGRSSN
Trigger: GTTACTGCTACGGCCGTGGCATCGGGGAGTGGCACT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAGTGCCACTCCCCGATaGCACGGCCGTAGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSATPR*HGRSSN
Trigger: GTTACTGCTACGGCCGTGGCATCGGGGAGTGGCACT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGTCAGTCGGTAGCCTaGTATACGGGCTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGQSVA*YTGSRW
Trigger: CCACCTCGAGCCCGTATAGCAGGCTACCGACTGACC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGTCAGTCGGTAGCCTaGTATACGGGCTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGQSVA*YTGSRW
Trigger: CCACCTCGAGCCCGTATAGCAGGCTACCGACTGACC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGTCCCACATTGTACTaGTTGGGCTGGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGPTLY*LGWPPR
Trigger: CCGAGGAGGCCAGCCCAAGCAGTACAATGTGGGACC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGTCCCACATTGTACTaGTTGGGCTGGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGPTLY*LGWPPR
Trigger: CCGAGGAGGCCAGCCCAAGCAGTACAATGTGGGACC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAGAGAGGTCCCCTGCTaGCCGTTCGTGGGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVREVPC*PFVGVV
Trigger: TACTACCCCCACGAACGGGCAGCAGGGGACCTCTCT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAGGCCCTGCAGCTCTaGAGTGTCGTCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESEALQL*SVVFTI
Trigger: GATGGTGAAGACGACACTGCAGAGCTGCAGGGCCTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCCGGCCTGAGGCCCTaGAGCTCTGCAGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPGLRP*SSAVSS
Trigger: AGACGACACTGCAGAGCTGCAGGGCCTCAGGCCGGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTGGCACGGGGCGCCTaGCATGACACCAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLARGA*HDTSKE
Trigger: CTCCTTGCTGGTGTCATGGCAGGCGCCCCGTGCCAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGCCCAACACTGGGTTaGTGGTGGGTTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCPTLG*WWVVPG
Trigger: TCCTGGCACAACCCACCAGCAACCCAGTGTTGGGCA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCCACCAGTCTCATGTaGCCTCCTCCACTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVATSLM*PPPLVA
Trigger: GGCGACAAGTGGAGGAGGCCACATGAGACTGGTGGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCCACCAGTCTCATGTaGCCTCCTCCACTTGTCGCC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGATSLM*PPPLVA
Trigger: GGCGACAAGTGGAGGAGGCCACATGAGACTGGTGGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGGTGGGAATTGGGCTaGCTGGGGGTCTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGWELG*LGVSVI
Trigger: TATCACGGAGACCCCCAGCCAGCCCAATTCCCACCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGGTGGGAATTGGGCTaGCTGGGGGTCTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGWELG*LGVSVI
Trigger: TATCACGGAGACCCCCAGCCAGCCCAATTCCCACCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTTCCACTGGATGGGGTaGGAATTGGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGFHWMG*ELGWLG
Trigger: CCCCAGCCAGCCCAATTCCCACCCCATCCAGTGGAA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATTCCACTGGATGGGGTaGGAATTGGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQFHWMG*ELGWLG
Trigger: CCCCAGCCAGCCCAATTCCCACCCCATCCAGTGGAA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGGCATTCCACTGGATaGGGTGGGAATTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGHSTG*GGNWAG
Trigger: GCCAGCCCAATTCCCACCCCATCCAGTGGAATGCCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGGCATTCCACTGGATaGGGTGGGAATTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGHSTG*GGNWAG
Trigger: GCCAGCCCAATTCCCACCCCATCCAGTGGAATGCCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGGCATTCCACTGGATaGGGTGGGAATTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGHSTG*GGNWAG
Trigger: GCCAGCCCAATTCCCACCCCATCCAGTGGAATGCCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCCGGGGCATTCCACTaGATGGGGTGGGAATTGGGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSGAFH*MGWELG
Trigger: GCCCAATTCCCACCCCATCCAGTGGAATGCCCCGGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCCGGGGCATTCCACTaGATGGGGTGGGAATTGGGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSGAFH*MGWELG
Trigger: GCCCAATTCCCACCCCATCCAGTGGAATGCCCCGGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATCCGGGGCATTCCACTaGATGGGGTGGGAATTGGGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQSGAFH*MGWELG
Trigger: GCCCAATTCCCACCCCATCCAGTGGAATGCCCCGGA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCACATTGTACTGCTTaGGCTGGCCTCCTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPHCTA*AGLLGS
Trigger: TGACCCGAGGAGGCCAGCCCAAGCAGTACAATGTGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGTGCCTCACCTCCCTaGCTCGGTCGTACACCCAGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGASPP*LGRTPS
Trigger: GCTGGGTGTACGACCGAGCCAGGGAGGTGAGGCACC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGTGCATCTCTCTCCTaGCCATCTCGCAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGASLS*PSRRTW
Trigger: CCAAGTCCTGCGAGATGGCCAGGAGAGAGATGCACC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCTCCAGATGCAAGTTaGTCGGTGGAGACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPPDAS*SVETAV
Trigger: CACCGCTGTCTCCACCGACCAACTTGCATCTGGAGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCGAGGAGCCACCCAGTaGACAGTGAATGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRGATQ*TVNELA
Trigger: CGCCAACTCATTCACTGTCCACTGGGTGGCTCCTCG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTGCTGGCCAATCAGTaGCGGGCTCTCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLLANQ*RALLSA
Trigger: GGCAGAGAGGAGAGCCCGCCACTGATTGGCCAGCAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAAACTGTGGCTTGCTaGCCAATCAGTGGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESETVAC*PISGGL
Trigger: GAGCCCGCCACTGATTGGCCAGCAAGCCACAGTTTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGGCTTGCTGCTTGCTaGACTGTCCCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQWLAAC*TVPTAS
Trigger: ACTGGCCGTGGGGACAGTCCAGCAAGCAGCAAGCCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGGCTTGCTGCTTGCTaGACTGTCCCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVWLAAC*TVPTAS
Trigger: ACTGGCCGTGGGGACAGTCCAGCAAGCAGCAAGCCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGGCTTGCTGCTTGCTaGACTGTCCCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGWLAAC*TVPTAS
Trigger: ACTGGCCGTGGGGACAGTCCAGCAAGCAGCAAGCCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGCCATTGGCTGGGATaGCATCGACTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGHWLG*HRLGSQ
Trigger: CTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGEPQVG*CVDGGG
Trigger: TCCACCGCCATCGACGCACCATCCAACCTGCGGTTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVEPQVG*CVDGGG
Trigger: TCCACCGCCATCGACGCACCATCCAACCTGCGGTTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAACCGCAGGTTGGATaGTGCGTCGATGGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQEPQVG*CVDGGG
Trigger: TCCACCGCCATCGACGCACCATCCAACCTGCGGTTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRSWVW*SGTAGW
Trigger: CCAACCTGCGGTTCCTGACCACCACACCCAACTCCT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCAAGGAGTTGGGTGTaGTGGTCAGGAACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESARSWV*WSGTAG
Trigger: ACCTGCGGTTCCTGACCACCACACCCAACTCCTTGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCGGCAGGTATGGTCTTaGCCTAAGCCTGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRQVWS*PKPDGG
Trigger: ACCCCCGTCAGGCTTAGGCCAAGACCATACCTGCCG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCGGCAGGTATGGTCTTaGCCTAAGCCTGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRQVWS*PKPDGG
Trigger: ACCCCCGTCAGGCTTAGGCCAAGACCATACCTGCCG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACGGCAGGTATGGTCTTaGCCTAAGCCTGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRQVWS*PKPDGG
Trigger: ACCCCCGTCAGGCTTAGGCCAAGACCATACCTGCCG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGTAGGTGTGGCCGGTaGTGCCATCGGGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGCRCGR*CHRDWV
Trigger: AACCCAGTCCCGATGGCACCACCGGCCACACCTACA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGTAGGTGTGGCCGGTaGTGCCATCGGGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQCRCGR*CHRDWV
Trigger: AACCCAGTCCCGATGGCACCACCGGCCACACCTACA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp AAGCGTGTCACTTCTCTGTGGCCATACTGCTGGATGCTGATGAGCTGTCCCTCAGGGCATTCCACTGGATaGGGTGGGAATTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KRVTSLWPYCWMLMSCPSGHSTG*GGNWAA
Trigger: GGCTGCCCAATTCCCACCCCATCCAGTGGAATGCCC...TGAGGGACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGAAGTGACACGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR CAA 72 bp ACAGCGTTGCCCACAGTCACAACCTCTTCCCGAACCTaGTGCCTCCTCTGGTTCTGCAGTGCCTCCACTATG +
Preference number: 4 (lower is better)
Translates to: TALPTVTTSSRT*CLLWFCSASTM
Trigger: CATAGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
3UTR CAA 72 bp TCATCTGTAGGCTGGTTCAGGCCTTCGCTGACAGCGTaGCCCACAGTCACAACCTCTTCCCGAACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SSVGWFRPSLTA*PTVTTSSRTLC
Trigger: GCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTGTCAGCGAAGGCCTGAACCAGCCTACAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGCTGCACGATTTGCTaGGCCTGCCTCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGCTIC*ACLLLF
Trigger: GAAGAGCAAGAGGCAGGCTCAGCAAATCGTGCAGCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGCTGCACGATTTGCTaGGCCTGCCTCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGCTIC*ACLLLF
Trigger: GAAGAGCAAGAGGCAGGCTCAGCAAATCGTGCAGCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGCTGCACGATTTGCTaGGCCTGCCTCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGCTIC*ACLLLF
Trigger: GAAGAGCAAGAGGCAGGCTCAGCAAATCGTGCAGCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCAGCCAGGCTTGCTCTaGCTGACAGCCACCGGGGAT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGQPGLL*LTATGD
Trigger: ATCCCCGGTGGCTGTCAGTCAGAGCAAGCCTGGCTG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTGCAATGGTACAGCTaGTCCTGCCTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLQWYS*SCLSQP
Trigger: GGGCTGGGAGAGGCAGGATCAGCTGTACCATTGCAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTTGCAATGGTACAGCTaGTCCTGCCTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLQWYS*SCLSQP
Trigger: GGGCTGGGAGAGGCAGGATCAGCTGTACCATTGCAA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCTGTGCAGACACACTaGAGCAGGTTTCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPVQTH*SRFPRL
Trigger: CAACCGAGGAAACCTGCTTCAGTGTGTCTGCACAGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCACACCACTGTCGGTaGCACAGTGGCCGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPHHCR*HSGRRE
Trigger: CTCCCTACGGCCACTGTGTCACCGACAGTGGTGTGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCGTTTCAGGGAGGTTaGGCTCTGTGCTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPFQGG*ALCYCL
Trigger: AAGGCAGTAGCACAGAGCTCAACCTCCCTGAAACGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGAGCGGGGGTCCAGGTaGTCACAATTGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGERGSR*SQLWSL
Trigger: CAGAGACCACAATTGTGATCACCTGGACCCCCGCTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAGCGGGGGTCCAGGTaGTCACAATTGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQERGSR*SQLWSL
Trigger: CAGAGACCACAATTGTGATCACCTGGACCCCCGCTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTCGTACACCCAGCTTaGAGCCAATCCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVVHPA*SQSLER
Trigger: CCGCTCCAAGGATTGGCTTCAAGCTGGGTGTACGAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTCGTACACCCAGCTTaGAGCCAATCCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVVHPA*SQSLER
Trigger: CCGCTCCAAGGATTGGCTTCAAGCTGGGTGTACGAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAATGCTCCCAGAGTCTaGAGTCACTTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESNAPRV*SHFSGC
Trigger: GCACCCCGAGAAGTGACTTCAGACTCTGGGAGCATT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGCTTCCGGGCACAGTaGACTCCTGGACAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGCFRAQ*TPGQGY
Trigger: ATAGCCCTGTCCAGGAGTTCACTGTGCCCGGAAGCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGCTTCCGGGCACAGTaGACTCCTGGACAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQCFRAQ*TPGQGY
Trigger: ATAGCCCTGTCCAGGAGTTCACTGTGCCCGGAAGCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGCTTCCGGGCACAGTaGACTCCTGGACAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVCFRAQ*TPGQGY
Trigger: ATAGCCCTGTCCAGGAGTTCACTGTGCCCGGAAGCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCAAGGCAACCACACTaGCTGTGTACTCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQARQPH*LCTQTP
Trigger: CGGGGTCTGAGTACACAGTCAGTGTGGTTGCCTTGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCAAGGCAACCACACTaGCTGTGTACTCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVARQPH*LCTQTP
Trigger: CGGGGTCTGAGTACACAGTCAGTGTGGTTGCCTTGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGCTGAGCCTGCCTCTTaGTCTTCCCGGCTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGAEPAS*SSRLRC
Trigger: GCACCGAAGCCGGGAAGAGCAAGAGGCAGGCTCAGC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCTCCCAGCCCCGATaGAGGTACAGTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLSQPR*RYSPRS
Trigger: TGATCTGGGACTGTACCTGCATCGGGGCTGGGAGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCTCCCAGCCCCGATaGAGGTACAGTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLSQPR*RYSPRS
Trigger: TGATCTGGGACTGTACCTGCATCGGGGCTGGGAGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACTTCCACTCCCCTCTaGCATTGCCTGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTSTPL*HCLCRH
Trigger: GTGTCTGCACAGGCAATGGCAGAGGGGAGTGGAAGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCCGCCCTTCGGTGGTaGAGGAATAGAAGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQAALRW*RNRRSY
Trigger: GTAGGACCTTCTATTCCTGCACCACCGAAGGGCGGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCCGCCCTTCGGTGGTaGAGGAATAGAAGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVAALRW*RNRRSY
Trigger: GTAGGACCTTCTATTCCTGCACCACCGAAGGGCGGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCGTTCCCCACACACGTaGACCTCATCATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRSPHT*TSSCGP
Trigger: TGGGCCACATGATGAGGTGCACGTGTGTGGGGAACG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACGTTCCCCACACACGTaGACCTCATCATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRSPHT*TSSCGP
Trigger: TGGGCCACATGATGAGGTGCACGTGTGTGGGGAACG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCGTTCCCCACACACGTaGACCTCATCATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRSPHT*TSSCGP
Trigger: TGGGCCACATGATGAGGTGCACGTGTGTGGGGAACG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTCCGGTCACCGTGTTaGTGGTCACAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLRSPC*WSQGCW
Trigger: CCAGCACCCCTGTGACCAGCAACACGGTGACCGGAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTTGACAGGCAGCCTCTaGCCATGTTCCCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLTGSL*PCSPGR
Trigger: CCTGCCCGGGGAACATGGGCAGAGGCTGCCTGTCAA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTGGCTTTGGGACTCTaGTGGTTCCCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVALGL*WFPFTA
Trigger: GGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGCCAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGAGTCACTTCTCGGGGTaGCTCACCTCCCTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGSHFSG*LTSLAR
Trigger: CCGAGCCAGGGAGGTGAGGCACCCCGAGAAGTGACT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCAGAAACTGTGGCTTaGTGGCCAATCAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSETVA*WPISGG
Trigger: CCCGCCACTGATTGGCCAGCAAGCCACAGTTTCTGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAGGCCCTGCAGCTCTaGAGTGTCGTCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVEALQL*SVVFTI
Trigger: GATGGTGAAGACGACACTGCAGAGCTGCAGGGCCTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAGGCCCTGCAGCTCTaGAGTGTCGTCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQEALQL*SVVFTI
Trigger: GATGGTGAAGACGACACTGCAGAGCTGCAGGGCCTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGCCCAACACTGGGTTaGTGGTGGGTTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVCPTLG*WWVVPG
Trigger: TCCTGGCACAACCCACCAGCAACCCAGTGTTGGGCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGCCTCCGAAACACGTaGAGGAGCAAATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGLRNT*RSKWLR
Trigger: TCGGAGCCATTTGCTCCTGCACGTGTTTCGGAGGCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGCCTCCGAAACACGTaGAGGAGCAAATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGLRNT*RSKWLR
Trigger: TCGGAGCCATTTGCTCCTGCACGTGTTTCGGAGGCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGCCTCCGAAACACGTaGAGGAGCAAATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGLRNT*RSKWLR
Trigger: TCGGAGCCATTTGCTCCTGCACGTGTTTCGGAGGCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTGTGGCCATACTGCTaGATGCTGATGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLWPYC*MLMSCP
Trigger: GGGACAGCTCATCAGCATCCAGCAGTATGGCCACAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCTGTGATAGGTGCCTaGGGTCTACTCCACCGAACA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPVIGA*GLLHRT
Trigger: TGTTCGGTGGAGTAGACCCCAGGCACCTATCACAGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCCACATTGTACTGCTTaGGCTGGCCTCCTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGPHCTA*AGLLGS
Trigger: TGACCCGAGGAGGCCAGCCCAAGCAGTACAATGTGG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCCACATTGTACTGCTTaGGCTGGCCTCCTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVPHCTA*AGLLGS
Trigger: TGACCCGAGGAGGCCAGCCCAAGCAGTACAATGTGG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCACATTGTACTGCTTaGGCTGGCCTCCTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPHCTA*AGLLGS
Trigger: TGACCCGAGGAGGCCAGCCCAAGCAGTACAATGTGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCTTTGGGACTCTGCTaGTTCCCTTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESALGLC*FPFTAT
Trigger: GGTGGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGTGCATCTCTCTCCTaGCCATCTCGCAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGASLS*PSRRTW
Trigger: CCAAGTCCTGCGAGATGGCCAGGAGAGAGATGCACC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGTGCATCTCTCTCCTaGCCATCTCGCAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGASLS*PSRRTW
Trigger: CCAAGTCCTGCGAGATGGCCAGGAGAGAGATGCACC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGTGCATCTCTCTCCTaGCCATCTCGCAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGASLS*PSRRTW
Trigger: CCAAGTCCTGCGAGATGGCCAGGAGAGAGATGCACC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCCTCCAGATGCAAGTTaGTCGGTGGAGACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGPPDAS*SVETAV
Trigger: CACCGCTGTCTCCACCGACCAACTTGCATCTGGAGG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCTCCAGATGCAAGTTaGTCGGTGGAGACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPPDAS*SVETAV
Trigger: CACCGCTGTCTCCACCGACCAACTTGCATCTGGAGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTTAGGTCAGTGAGCTaGGGCACCTCTGGGACAACG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLRSVS*GTSGTT
Trigger: CGTTGTCCCAGAGGTGCCCCAGCTCACTGACCTAAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000055226.13
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCGAGGAGCCACCCAGTaGACAGTGAATGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRGATQ*TVNELA
Trigger: CGCCAACTCATTCACTGTCCACTGGGTGGCTCCTCG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACGAGGAGCCACCCAGTaGACAGTGAATGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRGATQ*TVNELA
Trigger: CGCCAACTCATTCACTGTCCACTGGGTGGCTCCTCG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCGAGGAGCCACCCAGTaGACAGTGAATGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRGATQ*TVNELA
Trigger: CGCCAACTCATTCACTGTCCACTGGGTGGCTCCTCG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAGGTCACCCTGTACCTaGAAACTTGCCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRSPCT*KLAPVG
Trigger: GCCCACAGGGGCAAGTTTCCAGGTACAGGGTGACCT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGAATGGCTGTGGACTaGATTCCAATCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGMAVD*IPIRGW
Trigger: CCAGCCCCTGATTGGAATCCAGTCCACAGCCATTCC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGGTGGGCGCAGGAATaGCTGTGGACTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESWWAQE*LWTGFQ
Trigger: TTGGAATCCAGTCCACAGCCATTCCTGCGCCCACCA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGATGACTCCCTGGGCTaGTCTGCTTGTCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESDDSLG*SACQCV
Trigger: GACACACTGACAAGCAGACCAGCCCAGGGAGTCATC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRSWVW*SGTAGW
Trigger: CCAACCTGCGGTTCCTGACCACCACACCCAACTCCT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRSWVW*SGTAGW
Trigger: CCAACCTGCGGTTCCTGACCACCACACCCAACTCCT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCAAGGAGTTGGGTGTaGTGGTCAGGAACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVARSWV*WSGTAG
Trigger: ACCTGCGGTTCCTGACCACCACACCCAACTCCTTGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCAAGGAGTTGGGTGTaGTGGTCAGGAACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGARSWV*WSGTAG
Trigger: ACCTGCGGTTCCTGACCACCACACCCAACTCCTTGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACACCAGCAAGGAGTTaGGTGTGGTGGTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTPARS*VWWSGT
Trigger: GGTTCCTGACCACCACACCCAACTCCTTGCTGGTGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CTGACAGCGTTGCCCACAGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGGACGGCGTCCAAGAGATaGTTGTCTGAGAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LTALPTVTTSSRTLCLLWTASKR*LSEREL
Trigger: AAGCTCTCTCTCAGACAACCATCTCTTGGACGCCGT...CCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAACGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACCTTGTGCCTCCTCTaGTTCTGCAGTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTLCLL*FCSAST
Trigger: AGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp GCTGGTGGTGAAGTCGAAGCGTGTCACTTCTCTGTGGCCATACTGCTGGATGCTGGATGGGGTGGGAATTaGGCAGCCATTGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AGGEVEACHFSVAILLDAGWGGN*AAIGQN
Trigger: ATTCTGCCCAATGGCTGCCCAATTCCCACCCCATCC...AGCATCCAGCAGTATGGCCACAGAGAAGTGACACGCTTCGACTTCACCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGATGTCCGGGTGTCCTaGTCGTTGCATCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESDVRVS*SLHLFL
Trigger: CAGAAACAGATGCAACGATCAGGACACCCGGACATC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCTGTGCAGACACACTaGAGCAGGTTTCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPVQTH*SRFPRL
Trigger: CAACCGAGGAAACCTGCTTCAGTGTGTCTGCACAGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCCTGTGCAGACACACTaGAGCAGGTTTCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVPVQTH*SRFPRL
Trigger: CAACCGAGGAAACCTGCTTCAGTGTGTCTGCACAGG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCCCAATGCGATACATaGCCCCTTCATTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPQCDT*PLHWLC
Trigger: GCACAACCAATGAAGGGGTCATGTATCGCATTGGGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCCGTTTCAGGGAGGTTaGGCTCTGTGCTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVPFQGG*ALCYCL
Trigger: AAGGCAGTAGCACAGAGCTCAACCTCCCTGAAACGG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAATGCTCCCAGAGTCTaGAGTCACTTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVNAPRV*SHFSGC
Trigger: GCACCCCGAGAAGTGACTTCAGACTCTGGGAGCATT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAATGCTCCCAGAGTCTaGAGTCACTTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQNAPRV*SHFSGC
Trigger: GCACCCCGAGAAGTGACTTCAGACTCTGGGAGCATT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGTCACAGGAGAAGTTaGAGGCAGCCACCTGACACT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCHRRS*RQPPDT
Trigger: AGTGTCAGGTGGCTGCCTTCAACTTCTCCTGTGACA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGGCTGATGCTCCTCTaGACTGGGGTCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGLMLL*TGVWPL
Trigger: CAATGGCCAGACCCCAGTTCAGAGGAGCATCAGCCC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp GTTGCCCACAGTCACAACCTCTTCCCGAACCTTGTGCCTCCTCTGGTTCTGCAGAAGATCTCTGGTCCATaGAGATTGGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VAHSHNLFPNLVPPLVLQKISGP*RLGCGR
Trigger: CCTTCCACACCCCAATCTTCATGGACCAGAGATCTT...CTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGAGGTTGTGACTGTGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCCGATCTTGTAGTTaGCACCGTTGTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLRSCS*HRCHGT
Trigger: GGTGCCATGACAACGGTGTCAACTACAAGATCGGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCACATCTAGCGGCATaGAGCACTCAATGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESAHLAA*STQWGN
Trigger: ATTGCCCCATTGAGTGCTTCATGCCGCTAGATGTGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTGGTCACTGCAGTTTaGACCAGGGGCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVVTAV*TRGWLS
Trigger: AGAAAGCCAGCCCCTGGTTCAAACTGCAGTGACCAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186129.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTGGTCACTGCAGTTTaGACCAGGGGCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVVTAV*TRGWLS
Trigger: AGAAAGCCAGCCCCTGGTTCAAACTGCAGTGACCAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000186129.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATACAAACCAGGGCGTTaGCTAGGTAGGTCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQYKPGR*LGRSVP
Trigger: GGGAACGGACCTACCTAGGCAACGCCCTGGTTTGTA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCGGTTGTCCTTCTTaGTCCACGTGTCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLGCPS*STCLQS
Trigger: GGATTGGAGACACGTGGAGCAAGAAGGACAACCGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCTGCCATTGCCTGTaGAGACACACTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLCHCL*RHTEAG
Trigger: ACCTGCTTCAGTGTGTCTGCACAGGCAATGGCAGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACTCCCCTCTGCCATTaGCTGTGCAGACACACTGAA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTPLCH*LCRHTE
Trigger: TTCAGTGTGTCTGCACAGGCAATGGCAGAGGGGAGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGACTTCCACTCCCCTCTaGCATTGCCTGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGTSTPL*HCLCRH
Trigger: GTGTCTGCACAGGCAATGGCAGAGGGGAGTGGAAGT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGACTTCCACTCCCCTCTaGCATTGCCTGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVTSTPL*HCLCRH
Trigger: GTGTCTGCACAGGCAATGGCAGAGGGGAGTGGAAGT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCCCTTCATTGGTTGTaGAGATCTCCTCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPLHWL*RSPRGQ
Trigger: CTGCCCACGAGGAGATCTGCACAACCAATGAAGGGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGCTGGGAGTAGGGGATaGAGGCCCATTCTCCACGAC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGAGSRG*RPILHD
Trigger: GTCGTGGAGAATGGGCCTGCATCCCCTACTCCCAGC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGTCACACTTCCATCTaGCCCGGCCCTGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGHTSI*PGPDQS
Trigger: GCTTTGGTCAGGGCCGGGGCAGATGGAAGTGTGACC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGAGTGCCACTCCCCGATaGCACGGCCGTAGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGSATPR*HGRSSN
Trigger: GTTACTGCTACGGCCGTGGCATCGGGGAGTGGCACT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAGGATTGCTTTCCCTaGCCTGGTGCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESEDCFP*PGAQQR
Trigger: TCTTTGCTGTGCACCAGGGCAGGGAAAGCAATCCTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGTCCCACATTGTACTaGTTGGGCTGGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGPTLY*LGWPPR
Trigger: CCGAGGAGGCCAGCCCAAGCAGTACAATGTGGGACC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTGGCTTTGGGACTCTaGTGGTTCCCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVALGL*WFPFTA
Trigger: GGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGCCAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTGGCTTTGGGACTCTaGTGGTTCCCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVALGL*WFPFTA
Trigger: GGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGCCAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAATGGAGCGCAGAGGCTaGAGGGTAGTAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQMERRG*RVVKTP
Trigger: CGGAGTCTTTACTACCCTGCAGCCTCTGCGCTCCAT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGATGGAGCGCAGAGGCTaGAGGGTAGTAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVMERRG*RVVKTP
Trigger: CGGAGTCTTTACTACCCTGCAGCCTCTGCGCTCCAT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGATGGAGCGCAGAGGCTaGAGGGTAGTAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGMERRG*RVVKTP
Trigger: CGGAGTCTTTACTACCCTGCAGCCTCTGCGCTCCAT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGAGAGAGGTCCCCTGCTaGCCGTTCGTGGGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGREVPC*PFVGVV
Trigger: TACTACCCCCACGAACGGGCAGCAGGGGACCTCTCT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGAGGGACAGCCGTTTaGTGTGTCAGTGTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGGTAV*CVSVVG
Trigger: CCCTACTACACTGACACAGCAAACGGCTGTCCCTCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000055226.13
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCAGAAACTGTGGCTTaGTGGCCAATCAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSETVA*WPISGG
Trigger: CCCGCCACTGATTGGCCAGCAAGCCACAGTTTCTGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCAGAAACTGTGGCTTaGTGGCCAATCAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSETVA*WPISGG
Trigger: CCCGCCACTGATTGGCCAGCAAGCCACAGTTTCTGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTGTACCTGGAAACTTaGCCCTGTGGGCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLYLET*PCGLSQ
Trigger: TTGGGAAAGCCCACAGGGGCAAGTTTCCAGGTACAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGCCTCCTCTGGTTCTaGAGTGCCTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCLLWF*SASTMM
Trigger: CATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCTTCCCGAACCTTGTaGCTCCTCTGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSSRTL*LLWFCS
Trigger: ACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGGCCATTTTCTCCCTaGCGATCCCACTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVWPFSP*RSHFSP
Trigger: CGGAGAGAAGTGGGATCGGCAGGGAGAAAATGGCCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGGCCATTTTCTCCCTaGCGATCCCACTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGWPFSP*RSHFSP
Trigger: CGGAGAGAAGTGGGATCGGCAGGGAGAAAATGGCCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTGCACCTCATCATGTaGCCCAGGTCATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVHLIM*PRSCCL
Trigger: TAAGCAGCATGACCTGGGCCACATGATGAGGTGCAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTTGGCACTGGTCAATaGGGTCACACTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLGTGQ*GHTSIC
Trigger: GCAGATGGAAGTGTGACCCCATTGACCAGTGCCAAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGGTGGGAATTGGGCTaGCTGGGGGTCTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGWELG*LGVSVI
Trigger: TATCACGGAGACCCCCAGCCAGCCCAATTCCCACCC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTTCCACTGGATGGGGTaGGAATTGGGCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGFHWMG*ELGWLG
Trigger: CCCCAGCCAGCCCAATTCCCACCCCATCCAGTGGAA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTCCGGGGCATTCCACTaGATGGGGTGGGAATTGGGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGSGAFH*MGWELG
Trigger: GCCCAATTCCCACCCCATCCAGTGGAATGCCCCGGA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTGTGGCCATACTGCTaGATGCTGATGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLWPYC*MLMSCP
Trigger: GGGACAGCTCATCAGCATCCAGCAGTATGGCCACAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTGTGGCCATACTGCTaGATGCTGATGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLWPYC*MLMSCP
Trigger: GGGACAGCTCATCAGCATCCAGCAGTATGGCCACAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTGTGGCCATACTGCTaGATGCTGATGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLWPYC*MLMSCP
Trigger: GGGACAGCTCATCAGCATCCAGCAGTATGGCCACAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCCTGTGATAGGTGCCTaGGGTCTACTCCACCGAACA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGPVIGA*GLLHRT
Trigger: TGTTCGGTGGAGTAGACCCCAGGCACCTATCACAGG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCTGTGATAGGTGCCTaGGGTCTACTCCACCGAACA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPVIGA*GLLHRT
Trigger: TGTTCGGTGGAGTAGACCCCAGGCACCTATCACAGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCTTTGGGACTCTGCTaGTTCCCTTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVALGLC*FPFTAT
Trigger: GGTGGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCTTTGGGACTCTGCTaGTTCCCTTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQALGLC*FPFTAT
Trigger: GGTGGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCTTTGGGACTCTGCTaGTTCCCTTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGALGLC*FPFTAT
Trigger: GGTGGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGTTGTAAGGTGGAATaGAGCGCAGAGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGCCKVE*SAEAAG
Trigger: CCCTGCAGCCTCTGCGCTCCATTCCACCTTACAACA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGTTGTAAGGTGGAATaGAGCGCAGAGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVCCKVE*SAEAAG
Trigger: CCCTGCAGCCTCTGCGCTCCATTCCACCTTACAACA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGTTGTAAGGTGGAATaGAGCGCAGAGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQCCKVE*SAEAAG
Trigger: CCCTGCAGCCTCTGCGCTCCATTCCACCTTACAACA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTCGGTGTTGTAAGGTaGAATGGAGCGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLGVVR*NGAQRL
Trigger: CAGCCTCTGCGCTCCATTCCACCTTACAACACCGAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCGGTGTTGTAAGGTaGAATGGAGCGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLGVVR*NGAQRL
Trigger: CAGCCTCTGCGCTCCATTCCACCTTACAACACCGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCGGTGTTGTAAGGTaGAATGGAGCGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLGVVR*NGAQRL
Trigger: CAGCCTCTGCGCTCCATTCCACCTTACAACACCGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTAGCCAGTGATATCTaGGGTAGTGCTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVASDI*GSAPLP
Trigger: TGGGAGAGGAGCACTACCCCAGATATCACTGGCTAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGACCCGCATCGTGTCTaGACCGATATTGGTGAATCG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESDPHRV*TDIGES
Trigger: CGATTCACCAATATCGGTCCAGACACGATGCGGGTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTTGCTGGCCAATCAGTaGCGGGCTCTCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLLANQ*RALLSA
Trigger: GGCAGAGAGGAGAGCCCGCCACTGATTGGCCAGCAA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGGCTTGCTGCTTGCTaGACTGTCCCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGWLAAC*TVPTAS
Trigger: ACTGGCCGTGGGGACAGTCCAGCAAGCAGCAAGCCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGCCATTTTTGGGAGTaGTGGTCACTCTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGHFWE*WSLCSL
Trigger: CAGGCTACAGAGTGACCACCACTCCCAAAAATGGCC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGAATGGCTGTGGACTaGATTCCAATCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGMAVD*IPIRGW
Trigger: CCAGCCCCTGATTGGAATCCAGTCCACAGCCATTCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGAATGGCTGTGGACTaGATTCCAATCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGMAVD*IPIRGW
Trigger: CCAGCCCCTGATTGGAATCCAGTCCACAGCCATTCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGGTGGGCGCAGGAATaGCTGTGGACTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQWWAQE*LWTGFQ
Trigger: TTGGAATCCAGTCCACAGCCATTCCTGCGCCCACCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGGTGGGCGCAGGAATaGCTGTGGACTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGWWAQE*LWTGFQ
Trigger: TTGGAATCCAGTCCACAGCCATTCCTGCGCCCACCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGATGACTCCCTGGGCTaGTCTGCTTGTCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVDDSLG*SACQCV
Trigger: GACACACTGACAAGCAGACCAGCCCAGGGAGTCATC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGATGACTCCCTGGGCTaGTCTGCTTGTCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGDDSLG*SACQCV
Trigger: GACACACTGACAAGCAGACCAGCCCAGGGAGTCATC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGATGACTCCCTGGGCTaGTCTGCTTGTCAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQDDSLG*SACQCV
Trigger: GACACACTGACAAGCAGACCAGCCCAGGGAGTCATC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTAGTGATGACTCCCTaGGCTGGTCTGCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVVMTP*AGLLVS
Trigger: ACTGACAAGCAGACCAGCCCAGGGAGTCATCACTAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGTCTGGCCATTGGCTaGGATGGCATCGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGLAIG*DGIDLE
Trigger: TTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGTCTGGCCATTGGCTaGGATGGCATCGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGLAIG*DGIDLE
Trigger: TTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGACACCAGCAAGGAGTTaGGTGTGGTGGTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGTPARS*VWWSGT
Trigger: GGTTCCTGACCACCACACCCAACTCCTTGCTGGTGT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAACACCAGCAAGGAGTTaGGTGTGGTGGTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQTPARS*VWWSGT
Trigger: GGTTCCTGACCACCACACCCAACTCCTTGCTGGTGT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAACCTTGTGCCTCCTCTaGTTCTGCAGTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQTLCLL*FCSAST
Trigger: AGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGACCTTGTGCCTCCTCTaGTTCTGCAGTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGTLCLL*FCSAST
Trigger: AGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAGTCATCTGTAGGCTaGTTCAGGCCTTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESESSVG*FRPSLT
Trigger: TGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCCACTCCTCTCCAATaGCGTAATGGGAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPTPLQ*RNGKPC
Trigger: ACACGGTTTCCCATTACGCCATTGGAGAGGAGTGGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGCTGCACGATTTGCTaGGCCTGCCTCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGCTIC*ACLLLF
Trigger: GAAGAGCAAGAGGCAGGCTCAGCAAATCGTGCAGCC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTTGCAATGGTACAGCTaGTCCTGCCTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLQWYS*SCLSQP
Trigger: GGGCTGGGAGAGGCAGGATCAGCTGTACCATTGCAA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGATGTCCGGGTGTCCTaGTCGTTGCATCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQDVRVS*SLHLFL
Trigger: CAGAAACAGATGCAACGATCAGGACACCCGGACATC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGATGTCCGGGTGTCCTaGTCGTTGCATCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVDVRVS*SLHLFL
Trigger: CAGAAACAGATGCAACGATCAGGACACCCGGACATC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCCCAATGCGATACATaGCCCCTTCATTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPQCDT*PLHWLC
Trigger: GCACAACCAATGAAGGGGTCATGTATCGCATTGGGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAATAGTGATGTTGTACTaGACACCGGGCTGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQIVMLY*TPGCRS
Trigger: CGACCTGCAGCCCGGTGTTCAGTACAACATCACTAT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGATAGTGATGTTGTACTaGACACCGGGCTGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVIVMLY*TPGCRS
Trigger: CGACCTGCAGCCCGGTGTTCAGTACAACATCACTAT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGATAGTGATGTTGTACTaGACACCGGGCTGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGIVMLY*TPGCRS
Trigger: CGACCTGCAGCCCGGTGTTCAGTACAACATCACTAT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCAAAGGTATTTCTGTTaGCAGGCAGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESQRYFC*QAASAH
Trigger: ATGGGCAGAGGCTGCCTGTCAACAGAAATACCTTTG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGAGCGGGGGTCCAGGTaGTCACAATTGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGERGSR*SQLWSL
Trigger: CAGAGACCACAATTGTGATCACCTGGACCCCCGCTC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGTCGTACACCCAGCTTaGAGCCAATCCTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGVVHPA*SQSLER
Trigger: CCGCTCCAAGGATTGGCTTCAAGCTGGGTGTACGAC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTGTCTCTCCGTAGGTaGTTCTGTAATAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLSLRR*FCNSAQ
Trigger: CTGTGCGCTATTACAGAATCACCTACGGAGAGACAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGCTTCCGGGCACAGTaGACTCCTGGACAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGCFRAQ*TPGQGY
Trigger: ATAGCCCTGTCCAGGAGTTCACTGTGCCCGGAAGCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGTCACAGGAGAAGTTaGAGGCAGCCACCTGACACT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQCHRRS*RQPPDT
Trigger: AGTGTCAGGTGGCTGCCTTCAACTTCTCCTGTGACA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGTCACAGGAGAAGTTaGAGGCAGCCACCTGACACT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVCHRRS*RQPPDT
Trigger: AGTGTCAGGTGGCTGCCTTCAACTTCTCCTGTGACA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGTCACAGGAGAAGTTaGAGGCAGCCACCTGACACT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGCHRRS*RQPPDT
Trigger: AGTGTCAGGTGGCTGCCTTCAACTTCTCCTGTGACA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTGGTCACTGCAGTTTaGACCAGGGGCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLVTAV*TRGWLS
Trigger: AGAAAGCCAGCCCCTGGTTCAAACTGCAGTGACCAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATTGGTCACTGCAGTTTaGACCAGGGGCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLVTAV*TRGWLS
Trigger: AGAAAGCCAGCCCCTGGTTCAAACTGCAGTGACCAA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGGGGCTCACTCTTCTaGTTGTTCTTCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRGSLF*LFFRAM
Trigger: CATTGCCCTGAAGAACAATCAGAAGAGTGAGCCCCT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAATCGCATCTGAAATaGCCACTGCCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESESHLK*PLPKPK
Trigger: CTTGGGCTTTGGCAGTGGTCATTTCAGATGCGATTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCCGATCTTGTAGTTaGCACCGTTGTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLRSCS*HRCHGT
Trigger: GGTGCCATGACAACGGTGTCAACTACAAGATCGGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCCGATCTTGTAGTTaGCACCGTTGTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLRSCS*HRCHGT
Trigger: GGTGCCATGACAACGGTGTCAACTACAAGATCGGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTCCGATCTTGTAGTTaGCACCGTTGTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLRSCS*HRCHGT
Trigger: GGTGCCATGACAACGGTGTCAACTACAAGATCGGAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCACATCTAGCGGCATaGAGCACTCAATGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGAHLAA*STQWGN
Trigger: ATTGCCCCATTGAGTGCTTCATGCCGCTAGATGTGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCACATCTAGCGGCATaGAGCACTCAATGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQAHLAA*STQWGN
Trigger: ATTGCCCCATTGAGTGCTTCATGCCGCTAGATGTGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTCTCCCAGCCCCGATaGAGGTACAGTCCCAGATCA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLSQPR*RYSPRS
Trigger: TGATCTGGGACTGTACCTGCATCGGGGCTGGGAGAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCGGTTGTCCTTCTTaGTCCACGTGTCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLGCPS*STCLQS
Trigger: GGATTGGAGACACGTGGAGCAAGAAGGACAACCGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCTGCCATTGCCTGTaGAGACACACTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLCHCL*RHTEAG
Trigger: ACCTGCTTCAGTGTGTCTGCACAGGCAATGGCAGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCTGCCATTGCCTGTaGAGACACACTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLCHCL*RHTEAG
Trigger: ACCTGCTTCAGTGTGTCTGCACAGGCAATGGCAGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTCTGCCATTGCCTGTaGAGACACACTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLCHCL*RHTEAG
Trigger: ACCTGCTTCAGTGTGTCTGCACAGGCAATGGCAGAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGACTCCCCTCTGCCATTaGCTGTGCAGACACACTGAA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVTPLCH*LCRHTE
Trigger: TTCAGTGTGTCTGCACAGGCAATGGCAGAGGGGAGT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGACTCCCCTCTGCCATTaGCTGTGCAGACACACTGAA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGTPLCH*LCRHTE
Trigger: TTCAGTGTGTCTGCACAGGCAATGGCAGAGGGGAGT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAACTCCCCTCTGCCATTaGCTGTGCAGACACACTGAA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQTPLCH*LCRHTE
Trigger: TTCAGTGTGTCTGCACAGGCAATGGCAGAGGGGAGT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCATTGCCCAGGCACGTaGACAGCATTTGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESHCPGT*TAFACF
Trigger: GAAACAAGCAAATGCTGTGCACGTGCCTGGGCAATG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCTCCCCGTTTGAATTaGCACCATAAGTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESAPRLN*HHKSGS
Trigger: TGACCCAGACTTATGGTGGCAATTCAAACGGGGAGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCGTTCCCCACACACGTaGACCTCATCATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGRSPHT*TSSCGP
Trigger: TGGGCCACATGATGAGGTGCACGTGTGTGGGGAACG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCTCTGTGGCCATACTaGTGGATGCTGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSLWPY*WMLMSC
Trigger: ACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTTTCCCTGCCCTGGTaGACAGCAAAGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLSLPW*TAKTLK
Trigger: CTTCAAAGTCTTTGCTGTGCACCAGGGCAGGGAAAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAGGATTGCTTTCCCTaGCCTGGTGCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVEDCFP*PGAQQR
Trigger: TCTTTGCTGTGCACCAGGGCAGGGAAAGCAATCCTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGAGGATTGCTTTCCCTaGCCTGGTGCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGEDCFP*PGAQQR
Trigger: TCTTTGCTGTGCACCAGGGCAGGGAAAGCAATCCTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCCAGTGTCAGGGTTTaGCTCCAGATGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSSVRV*LQMQVG
Trigger: ACCAACTTGCATCTGGAGGCAAACCCTGACACTGGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAGGGATCCCTTCTCCTaGCGCAACTACTGTGATTCG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRDPFS*RNYCDS
Trigger: CGAATCACAGTAGTTGCGGCAGGAGAAGGGATCCCT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000055226.13
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTGTACCTGGAAACTTaGCCCTGTGGGCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLYLET*PCGLSQ
Trigger: TTGGGAAAGCCCACAGGGGCAAGTTTCCAGGTACAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTGTACCTGGAAACTTaGCCCTGTGGGCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLYLET*PCGLSQ
Trigger: TTGGGAAAGCCCACAGGGGCAAGTTTCCAGGTACAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTCTTCACCATCAGGTaGAGGGAAAAGCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVFTIR*REKLPD
Trigger: ATCCGGGAGCTTTTCCCTGCACCTGATGGTGAAGAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTTGCTGGTGGGTTGTaGCAGGAAGCTGAATACCAT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVAGGL*QEAEYH
Trigger: ATGGTATTCAGCTTCCTGGCACAACCCACCAGCAAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGCCCAACACTGGGTTaGTGGTGGGTTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGCPTLG*WWVVPG
Trigger: TCCTGGCACAACCCACCAGCAACCCAGTGTTGGGCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGCCTCCTCTGGTTCTaGAGTGCCTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQCLLWF*SASTMM
Trigger: CATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGCCTCCTCTGGTTCTaGAGTGCCTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGCLLWF*SASTMM
Trigger: CATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTTCCCGAACCTTGTaGCTCCTCTGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSSRTL*LLWFCS
Trigger: ACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATCTTCCCGAACCTTGTaGCTCCTCTGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQSSRTL*LLWFCS
Trigger: ACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCTTCCCGAACCTTGTaGCTCCTCTGGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSSRTL*LLWFCS
Trigger: ACTGCAGAACCAGAGGAGGCACAAGGTTCGGGAAGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCGTCTCTGTCAGCTTaGACATCTAGCGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSSLSA*TSSGMK
Trigger: CTTCATGCCGCTAGATGTGCAAGCTGACAGAGACGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCGTGGGCAGCCATTaGGCAGAATCCAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLVGSH*AESKLL
Trigger: CAGAAGTTTGGATTCTGCCCAATGGCTGCCCACGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTGCACCTCATCATGTaGCCCAGGTCATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVHLIM*PRSCCL
Trigger: TAAGCAGCATGACCTGGGCCACATGATGAGGTGCAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTGCACCTCATCATGTaGCCCAGGTCATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVHLIM*PRSCCL
Trigger: TAAGCAGCATGACCTGGGCCACATGATGAGGTGCAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTTGGCACTGGTCAATaGGGTCACACTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLGTGQ*GHTSIC
Trigger: GCAGATGGAAGTGTGACCCCATTGACCAGTGCCAAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTTGGCACTGGTCAATaGGGTCACACTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLGTGQ*GHTSIC
Trigger: GCAGATGGAAGTGTGACCCCATTGACCAGTGCCAAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCATAGATCACACCTaGGGTCAGGCCTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLIDHT*GQAFDG
Trigger: ACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCGTGTCACTTCTCTGTaGCCATACTGCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRVTSL*PYCWML
Trigger: CAGCATCCAGCAGTATGGCCACAGAGAAGTGACACG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCGTGTCACTTCTCTGTaGCCATACTGCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRVTSL*PYCWML
Trigger: CAGCATCCAGCAGTATGGCCACAGAGAAGTGACACG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAAGTATCATCAACCTaGTCCACGGTAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESEVSST*STVGSG
Trigger: TCCAGACCCTACCGTGGACCAGGTTGATGATACTTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCACATTGTACTGCTTaGGCTGGCCTCCTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPHCTA*AGLLGS
Trigger: TGACCCGAGGAGGCCAGCCCAAGCAGTACAATGTGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCGCAGGACTTGGATaGTGTAAGTGTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLAGLG*CKCIPR
Trigger: GCGTGGAATACACTTACACCATCCAAGTCCTGCGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGTGCATCTCTCTCCTaGCCATCTCGCAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGASLS*PSRRTW
Trigger: CCAAGTCCTGCGAGATGGCCAGGAGAGAGATGCACC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGATGCAAGTTGGTCGGTaGAGACAGCGGTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVMQVGR*RQRCHY
Trigger: GTAGTGACACCGCTGTCTCCACCGACCAACTTGCAT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAATGCAAGTTGGTCGGTaGAGACAGCGGTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQMQVGR*RQRCHY
Trigger: GTAGTGACACCGCTGTCTCCACCGACCAACTTGCAT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGATGCAAGTTGGTCGGTaGAGACAGCGGTGTCACTAC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGMQVGR*RQRCHY
Trigger: GTAGTGACACCGCTGTCTCCACCGACCAACTTGCAT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTAGCCAGTGATATCTaGGGTAGTGCTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVASDI*GSAPLP
Trigger: TGGGAGAGGAGCACTACCCCAGATATCACTGGCTAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTAGCCAGTGATATCTaGGGTAGTGCTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVASDI*GSAPLP
Trigger: TGGGAGAGGAGCACTACCCCAGATATCACTGGCTAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGACCCGCATCGTGTCTaGACCGATATTGGTGAATCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVDPHRV*TDIGES
Trigger: CGATTCACCAATATCGGTCCAGACACGATGCGGGTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGACCCGCATCGTGTCTaGACCGATATTGGTGAATCG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGDPHRV*TDIGES
Trigger: CGATTCACCAATATCGGTCCAGACACGATGCGGGTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGACCCGCATCGTGTCTaGACCGATATTGGTGAATCG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQDPHRV*TDIGES
Trigger: CGATTCACCAATATCGGTCCAGACACGATGCGGGTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCGAGGAGCCACCCAGTaGACAGTGAATGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGRGATQ*TVNELA
Trigger: CGCCAACTCATTCACTGTCCACTGGGTGGCTCCTCG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGAAACTGTGGCTTGCTaGCCAATCAGTGGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGETVAC*PISGGL
Trigger: GAGCCCGCCACTGATTGGCCAGCAAGCCACAGTTTC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGCACAGTGAACTCCTaGACAGGGCTATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGTVNS*TGLFPP
Trigger: AGGAGGAAATAGCCCTGTCCAGGAGTTCACTGTGCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGCACAGTGAACTCCTaGACAGGGCTATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGTVNS*TGLFPP
Trigger: AGGAGGAAATAGCCCTGTCCAGGAGTTCACTGTGCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGCCATTTTTGGGAGTaGTGGTCACTCTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGHFWE*WSLCSL
Trigger: CAGGCTACAGAGTGACCACCACTCCCAAAAATGGCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGCCATTTTTGGGAGTaGTGGTCACTCTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGHFWE*WSLCSL
Trigger: CAGGCTACAGAGTGACCACCACTCCCAAAAATGGCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGCCATTTTTGGGAGTaGTGGTCACTCTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGHFWE*WSLCSL
Trigger: CAGGCTACAGAGTGACCACCACTCCCAAAAATGGCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTCCTAGGCCATTTTTaGGAGTGGTGGTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVLGHF*EWWSLC
Trigger: ACAGAGTGACCACCACTCCCAAAAATGGCCTAGGAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGAGGTCACCCTGTACCTaGAAACTTGCCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGRSPCT*KLAPVG
Trigger: GCCCACAGGGGCAAGTTTCCAGGTACAGGGTGACCT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCATTCCAATCAGGGGCTaGCTCTCCATATCATCGTGC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESIPIRG*LSISSC
Trigger: GCACGATGATATGGAGAGCCAGCCCCTGATTGGAAT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTAGTGATGACTCCCTaGGCTGGTCTGCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVVMTP*AGLLVS
Trigger: ACTGACAAGCAGACCAGCCCAGGGAGTCATCACTAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTAGTGATGACTCCCTaGGCTGGTCTGCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVVMTP*AGLLVS
Trigger: ACTGACAAGCAGACCAGCCCAGGGAGTCATCACTAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTAGTGATGACTCCCTaGGCTGGTCTGCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVVMTP*AGLLVS
Trigger: ACTGACAAGCAGACCAGCCCAGGGAGTCATCACTAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGCCATTGGCTGGGATaGCATCGACTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGHWLG*HRLGSQ
Trigger: CTGGCTTCCAAGTCGATGCCATCCCAGCCAATGGCC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGATGCTCCTCTGAACTaGGGTCTGGCCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGDAPLN*GLAIGW
Trigger: CCAGCCAATGGCCAGACCCCAGTTCAGAGGAGCATC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGAGGAGTTGGGTGTGGTaGTCAGGAACCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGRSWVW*SGTAGW
Trigger: CCAACCTGCGGTTCCTGACCACCACACCCAACTCCT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACTGTTCTCCTACATGGTAGGTCTTCCCATCGTCATAGCACGTTGCTTCATGGGGCAAGGAGTTGGGTGTaGTGGTCAGGAACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TVLLHGRSSHRHSTLLHGARSWV*WSGTAG
Trigger: ACCTGCGGTTCCTGACCACCACACCCAACTCCTTGC...CCCATGAAGCAACGTGCTATGACGATGGGAAGACCTACCATGTAGGAGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGCAAGGAGTTGGGTGTaGTGGTCAGGAACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGARSWV*WSGTAG
Trigger: ACCTGCGGTTCCTGACCACCACACCCAACTCCTTGC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CTGGTAGAAGTTCCAGGAACTTGGAACTGTAAGGGCTCTTCGTCGGTGCCAACTACACCAGCAAGGAGTTaGGTGTGGTGGTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LVEVPGTWNCKGSSSVPTTPARS*VWWSGT
Trigger: GGTTCCTGACCACCACACCCAACTCCTTGCTGGTGT...AGTTGGCACCGACGAAGAGCCCTTACAGTTCCAAGTTCCTGGAACTTCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGAAGGGTAACCAGTTaGGGAAGCTCATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGRVTS*GSSSVF
Trigger: GAAGACAGATGAGCTTCCCCAACTGGTTACCCTTCC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp AAAGCCAGCGTCAGACAACCGCTCCCACTCCTCTCCAATGGCGTAATGGGAAACATGAAGATTGGGGTGTaGAAGGGTAACCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KASVRQPLPLLSNGVMGNMKIGV*KGNQLG
Trigger: CCCCAACTGGTTACCCTTCCACACCCCAATCTTCAT...GTTTCCCATTACGCCATTGGAGAGGAGTGGGAGCGGTTGTCTGACGCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCATGAAGATTGGGGTGTaGAAGGGTAACCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESMKIGV*KGNQLG
Trigger: CCCCAACTGGTTACCCTTCCACACCCCAATCTTCAT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp GAGGCATGTGCAGCTCATCCGCTGGCCATTTTCTCCCTGCCGATCCCACTTCTCAACATCCAAGATCTCTaGTCCATGAAGATTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EACAAHPLAIFSLPIPLLNIQDL*SMKIGV
Trigger: CACCCCAATCTTCATGGACCAGAGATCTTGGATGTT...GAGAAGTGGGATCGGCAGGGAGAAAATGGCCAGCGGATGAGCTGCACATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187627.2
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTTGTTGCCCAACACTaGGTTGCTGGTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVFVAQH*VAGGLC
Trigger: GCACAACCCACCAGCAACCCAGTGTTGGGCAACAAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATTTGTTGCCCAACACTaGGTTGCTGGTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQFVAQH*VAGGLC
Trigger: GCACAACCCACCAGCAACCCAGTGTTGGGCAACAAA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTTTGTTGCCCAACACTaGGTTGCTGGTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGFVAQH*VAGGLC
Trigger: GCACAACCCACCAGCAACCCAGTGTTGGGCAACAAA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTACATTCGGCAGGTATaGTCTTGGCCTAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESYIRQV*SWPKPD
Trigger: GTCAGGCTTAGGCCAAGACCATACCTGCCGAATGTA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACGGCGTCCAAGAGATaGTTGTCTGAGAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTASKR*LSEREL
Trigger: AAGCTCTCTCTCAGACAACCATCTCTTGGACGCCGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAGTCATCTGTAGGCTaGTTCAGGCCTTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVESSVG*FRPSLT
Trigger: TGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGAGTCATCTGTAGGCTaGTTCAGGCCTTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGESSVG*FRPSLT
Trigger: TGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAGTCATCTGTAGGCTaGTTCAGGCCTTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQESSVG*FRPSLT
Trigger: TGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCCCACTCCTCTCCAATaGCGTAATGGGAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVPTPLQ*RNGKPC
Trigger: ACACGGTTTCCCATTACGCCATTGGAGAGGAGTGGG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCCCACTCCTCTCCAATaGCGTAATGGGAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGPTPLQ*RNGKPC
Trigger: ACACGGTTTCCCATTACGCCATTGGAGAGGAGTGGG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCCACTCCTCTCCAATaGCGTAATGGGAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPTPLQ*RNGKPC
Trigger: ACACGGTTTCCCATTACGCCATTGGAGAGGAGTGGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCCAAAGCCCAAGCACTaGCATGTGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESPKPKH*HVSLKP
Trigger: TGGCTTTAAGCTCACATGCCAGTGCTTGGGCTTTGG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGGGCGCAGGAATGGTaGTCACTGCAGTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVWAQEW*SLQFEP
Trigger: TGGTTCAAACTGCAGTGACCACCATTCCTGCGCCCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186129.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGGGCGCAGGAATGGTaGTCACTGCAGTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGWAQEW*SLQFEP
Trigger: TGGTTCAAACTGCAGTGACCACCATTCCTGCGCCCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186129.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGGGCGCAGGAATGGTaGTCACTGCAGTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQWAQEW*SLQFEP
Trigger: TGGTTCAAACTGCAGTGACCACCATTCCTGCGCCCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186129.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CTCATAGATCACACCTGGGGTCAGGCCTTTGATGGTATAGGAGTTAAGGTGGCCTTCCACTGGATGGGGTaGGAATTGGGCAGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LIDHTWGQAFDGIGVKVAFHWMG*ELGSHW
Trigger: CCAATGGCTGCCCAATTCCCACCCCATCCAGTGGAA...GGCCACCTTAACTCCTATACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
3UTR CAA 72 bp AACCCTGAAGCAGAACAGGGTGACCAACTGTCACCATaGAGGAGAGAAGTCTCAAAACATCCCACGGGGCGA +
Preference number: 4 (lower is better)
Translates to: NPEAEQGDQLSP*RREVSKHPTGR
Trigger: TCGCCCCGTGGGATGTTTTGAGACTTCTCTCCTCAATGGTGACAGTTGGTCACCCTGTTCTGCTTCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGACGTCCCAGCAGCATaGTCAAAACACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQDVPAA*SKHFSA
Trigger: AGCTGAGAAGTGTTTTGATCATGCTGCTGGGACGTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGACGTCCCAGCAGCATaGTCAAAACACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVDVPAA*SKHFSA
Trigger: AGCTGAGAAGTGTTTTGATCATGCTGCTGGGACGTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGACGTCCCAGCAGCATaGTCAAAACACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGDVPAA*SKHFSA
Trigger: AGCTGAGAAGTGTTTTGATCATGCTGCTGGGACGTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCTGTGCAGACACACTaGAGCAGGTTTCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPVQTH*SRFPRL
Trigger: CAACCGAGGAAACCTGCTTCAGTGTGTCTGCACAGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGCTGCTTATCCCACTaGTCCCCAATGCGATACATG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGCCLSH*SPMRYM
Trigger: CATGTATCGCATTGGGGATCAGTGGGATAAGCAGCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGCTGCTTATCCCACTaGTCCCCAATGCGATACATG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVCCLSH*SPMRYM
Trigger: CATGTATCGCATTGGGGATCAGTGGGATAAGCAGCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGCTGCTTATCCCACTaGTCCCCAATGCGATACATG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQCCLSH*SPMRYM
Trigger: CATGTATCGCATTGGGGATCAGTGGGATAAGCAGCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCGTTTCAGGGAGGTTaGGCTCTGTGCTACTGCCTT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPFQGG*ALCYCL
Trigger: AAGGCAGTAGCACAGAGCTCAACCTCCCTGAAACGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCAAAGGTATTTCTGTTaGCAGGCAGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGQRYFC*QAASAH
Trigger: ATGGGCAGAGGCTGCCTGTCAACAGAAATACCTTTG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCAAAGGTATTTCTGTTaGCAGGCAGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVQRYFC*QAASAH
Trigger: ATGGGCAGAGGCTGCCTGTCAACAGAAATACCTTTG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACAAAGGTATTTCTGTTaGCAGGCAGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQQRYFC*QAASAH
Trigger: ATGGGCAGAGGCTGCCTGTCAACAGAAATACCTTTG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCAGGGGACAGCCCAGTaGTTTCAGCAAAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGQGTAQ*FQQRYF
Trigger: GAAATACCTTTGCTGAAATCACTGGGCTGTCCCCTG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCAGGGGACAGCCCAGTaGTTTCAGCAAAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVQGTAQ*FQQRYF
Trigger: GAAATACCTTTGCTGAAATCACTGGGCTGTCCCCTG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACAGGGGACAGCCCAGTaGTTTCAGCAAAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQQGTAQ*FQQRYF
Trigger: GAAATACCTTTGCTGAAATCACTGGGCTGTCCCCTG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGAATGCTCCCAGAGTCTaGAGTCACTTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGNAPRV*SHFSGC
Trigger: GCACCCCGAGAAGTGACTTCAGACTCTGGGAGCATT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAAAGTGCAGGAACTCTaGTCAGCATGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESKVQEL*SAWTTS
Trigger: AGAAGTGGTCCATGCTGATCAGAGTTCCTGCACTTT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTGTCTCTCCGTAGGTaGTTCTGTAATAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLSLRR*FCNSAQ
Trigger: CTGTGCGCTATTACAGAATCACCTACGGAGAGACAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTGTCTCTCCGTAGGTaGTTCTGTAATAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLSLRR*FCNSAQ
Trigger: CTGTGCGCTATTACAGAATCACCTACGGAGAGACAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCGACTTGGAAGCCAGTaGTTGTCTCTGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESRLGSQ*LSLSLF
Trigger: GAACAAAGACAGAGACAATCACTGGCTTCCAAGTCG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAGGGGCTCACTCTTCTaGTTGTTCTTCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRGSLF*LFFRAM
Trigger: CATTGCCCTGAAGAACAATCAGAAGAGTGAGCCCCT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAGGGGCTCACTCTTCTaGTTGTTCTTCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRGSLF*LFFRAM
Trigger: CATTGCCCTGAAGAACAATCAGAAGAGTGAGCCCCT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAGGGGCTCACTCTTCTaGTTGTTCTTCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRGSLF*LFFRAM
Trigger: CATTGCCCTGAAGAACAATCAGAAGAGTGAGCCCCT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAAGATCTCTGGTCCATaGAGATTGGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGKISGP*RLGCGR
Trigger: CCTTCCACACCCCAATCTTCATGGACCAGAGATCTT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAAGATCTCTGGTCCATaGAGATTGGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVKISGP*RLGCGR
Trigger: CCTTCCACACCCCAATCTTCATGGACCAGAGATCTT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGATCTCTGGTCCATaGAGATTGGGGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQKISGP*RLGCGR
Trigger: CCTTCCACACCCCAATCTTCATGGACCAGAGATCTT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTTGTGCCAGGAAGCTaGATACCATTTTCGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVVPGS*IPFSVS
Trigger: TGACACCGAAAATGGTATTCAGCTTCCTGGCACAAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTAAGGGTCAAAGCATaGGTCATCTGTAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVRVKA*VICRLV
Trigger: AACCAGCCTACAGATGACTCATGCTTTGACCCTTAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAATCGCATCTGAAATaGCCACTGCCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVESHLK*PLPKPK
Trigger: CTTGGGCTTTGGCAGTGGTCATTTCAGATGCGATTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAATCGCATCTGAAATaGCCACTGCCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQESHLK*PLPKPK
Trigger: CTTGGGCTTTGGCAGTGGTCATTTCAGATGCGATTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGAATCGCATCTGAAATaGCCACTGCCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGESHLK*PLPKPK
Trigger: CTTGGGCTTTGGCAGTGGTCATTTCAGATGCGATTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGTGGTCACTGCAGTTTaGACCAGGGGCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGVVTAV*TRGWLS
Trigger: AGAAAGCCAGCCCCTGGTTCAAACTGCAGTGACCAC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000186129.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGACTTCCACTCCCCTCTaGCATTGCCTGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGTSTPL*HCLCRH
Trigger: GTGTCTGCACAGGCAATGGCAGAGGGGAGTGGAAGT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCATTGCCCAGGCACGTaGACAGCATTTGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGHCPGT*TAFACF
Trigger: GAAACAAGCAAATGCTGTGCACGTGCCTGGGCAATG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCATTGCCCAGGCACGTaGACAGCATTTGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVHCPGT*TAFACF
Trigger: GAAACAAGCAAATGCTGTGCACGTGCCTGGGCAATG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACATTGCCCAGGCACGTaGACAGCATTTGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQHCPGT*TAFACF
Trigger: GAAACAAGCAAATGCTGTGCACGTGCCTGGGCAATG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGCTCCCCGTTTGAATTaGCACCATAAGTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQAPRLN*HHKSGS
Trigger: TGACCCAGACTTATGGTGGCAATTCAAACGGGGAGC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCTCCCCGTTTGAATTaGCACCATAAGTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGAPRLN*HHKSGS
Trigger: TGACCCAGACTTATGGTGGCAATTCAAACGGGGAGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCTCCCCGTTTGAATTaGCACCATAAGTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVAPRLN*HHKSGS
Trigger: TGACCCAGACTTATGGTGGCAATTCAAACGGGGAGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCCCTTCATTGGTTGTaGAGATCTCCTCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPLHWL*RSPRGQ
Trigger: CTGCCCACGAGGAGATCTGCACAACCAATGAAGGGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATGGTATCGGACACCATaGACAAACTTCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQWYRTP*TNFSQE
Trigger: CTCCTGGGAGAAGTTTGTGCATGGTGTCCGATACCA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTGGTATCGGACACCATaGACAAACTTCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGWYRTP*TNFSQE
Trigger: CTCCTGGGAGAAGTTTGTGCATGGTGTCCGATACCA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTGGTATCGGACACCATaGACAAACTTCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVWYRTP*TNFSQE
Trigger: CTCCTGGGAGAAGTTTGTGCATGGTGTCCGATACCA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCTCTGTGGCCATACTaGTGGATGCTGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSLWPY*WMLMSC
Trigger: ACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTCTGTGGCCATACTaGTGGATGCTGATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSLWPY*WMLMSC
Trigger: ACAGCTCATCAGCATCCAGCAGTATGGCCACAGAGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTTTCCCTGCCCTGGTaGACAGCAAAGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLSLPW*TAKTLK
Trigger: CTTCAAAGTCTTTGCTGTGCACCAGGGCAGGGAAAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTTTCCCTGCCCTGGTaGACAGCAAAGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLSLPW*TAKTLK
Trigger: CTTCAAAGTCTTTGCTGTGCACCAGGGCAGGGAAAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGTGGCTTTGGGACTCTaGTGGTTCCCTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGVALGL*WFPFTA
Trigger: GGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGCCAC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGATGGAGCGCAGAGGCTaGAGGGTAGTAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGMERRG*RVVKTP
Trigger: CGGAGTCTTTACTACCCTGCAGCCTCTGCGCTCCAT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGCCAGACACAACAATaGTCCCAGAGTCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSQTQQ*SQSLKS
Trigger: TGACTTCAGACTCTGGGAGCATTGTTGTGTCTGGCT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCCAGTGTCAGGGTTTaGCTCCAGATGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSSVRV*LQMQVG
Trigger: ACCAACTTGCATCTGGAGGCAAACCCTGACACTGGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCCAGTGTCAGGGTTTaGCTCCAGATGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSSVRV*LQMQVG
Trigger: ACCAACTTGCATCTGGAGGCAAACCCTGACACTGGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATCCAGTGTCAGGGTTTaGCTCCAGATGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQSSVRV*LQMQVG
Trigger: ACCAACTTGCATCTGGAGGCAAACCCTGACACTGGA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTCTCCATATCATCGTaGAAGGCAACCACACTGACT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLSISS*KATTLT
Trigger: AGTCAGTGTGGTTGCCTTGCACGATGATATGGAGAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTTGCTGGTGGGTTGTaGCAGGAAGCTGAATACCAT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVAGGL*QEAEYH
Trigger: ATGGTATTCAGCTTCCTGGCACAACCCACCAGCAAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTTGCTGGTGGGTTGTaGCAGGAAGCTGAATACCAT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVAGGL*QEAEYH
Trigger: ATGGTATTCAGCTTCCTGGCACAACCCACCAGCAAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGGCCATTTTCTCCCTaGCGATCCCACTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGWPFSP*RSHFSP
Trigger: CGGAGAGAAGTGGGATCGGCAGGGAGAAAATGGCCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCGTCTCTGTCAGCTTaGACATCTAGCGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSSLSA*TSSGMK
Trigger: CTTCATGCCGCTAGATGTGCAAGCTGACAGAGACGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TGGTGGTCAGGAACCGCAGGTTGGATGGTGCGTCGATGGCGGTGGAGGCATCGAAAAGAGTCCTCATTATaGAAATACATCCACTTCAGG +
Preference number: 4 (lower is better)
Translates to: WWSGTAGWMVRRWRWRHRKESSL*KYIHFR
Trigger: CCTGAAGTGGATGTATTTGCATAATGAGGACTCTTT...TCGATGCCTCCACCGCCATCGACGCACCATCCAACCTGCGGTTCCTGACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186985.2
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCATAGATCACACCTaGGGTCAGGCCTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLIDHT*GQAFDG
Trigger: ACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCATAGATCACACCTaGGGTCAGGCCTTTGATGGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLIDHT*GQAFDG
Trigger: ACCATCAAAGGCCTGACCCCAGGTGTGATCTATGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAGATCAAGGTACTGTaGTTCATCTCCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQEIKVL*FISLLA
Trigger: AGCGAGGAGGGAGATGAACCACAGTACCTTGATCTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAGATCAAGGTACTGTaGTTCATCTCCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVEIKVL*FISLLA
Trigger: AGCGAGGAGGGAGATGAACCACAGTACCTTGATCTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAAGTATCATCAACCTaGTCCACGGTAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVEVSST*STVGSG
Trigger: TCCAGACCCTACCGTGGACCAGGTTGATGATACTTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGAAGTATCATCAACCTaGTCCACGGTAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQEVSST*STVGSG
Trigger: TCCAGACCCTACCGTGGACCAGGTTGATGATACTTC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGAAGTATCATCAACCTaGTCCACGGTAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGEVSST*STVGSG
Trigger: TCCAGACCCTACCGTGGACCAGGTTGATGATACTTC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCTGTGATAGGTGCCTaGGGTCTACTCCACCGAACA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPVIGA*GLLHRT
Trigger: TGTTCGGTGGAGTAGACCCCAGGCACCTATCACAGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTTGCTTTCCCTGCCCTaGTGCACAGCAAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLLSLP*CTAKTL
Trigger: CAAAGTCTTTGCTGTGCACCAGGGCAGGGAAAGCAA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTTGCTTTCCCTGCCCTaGTGCACAGCAAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLLSLP*CTAKTL
Trigger: CAAAGTCTTTGCTGTGCACCAGGGCAGGGAAAGCAA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATTGCTTTCCCTGCCCTaGTGCACAGCAAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLLSLP*CTAKTL
Trigger: CAAAGTCTTTGCTGTGCACCAGGGCAGGGAAAGCAA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGTTTCATTGACAAACTaGAGGTTAGTGGGAGCGTCG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESVSLTN*RLVGAS
Trigger: CGACGCTCCCACTAACCTCCAGTTTGTCAATGAAAC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGCTTTGGGACTCTGCTaGTTCCCTTTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGALGLC*FPFTAT
Trigger: GGTGGCTGTGAAAGGGAACCAGCAGAGTCCCAAAGC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGTTGTAAGGTGGAATaGAGCGCAGAGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGCCKVE*SAEAAG
Trigger: CCCTGCAGCCTCTGCGCTCCATTCCACCTTACAACA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTCGGTGTTGTAAGGTaGAATGGAGCGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLGVVR*NGAQRL
Trigger: CAGCCTCTGCGCTCCATTCCACCTTACAACACCGAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCGCAGGACTTGGATaGTGTAAGTGTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLAGLG*CKCIPR
Trigger: GCGTGGAATACACTTACACCATCCAAGTCCTGCGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTCGCAGGACTTGGATaGTGTAAGTGTATTCCACGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLAGLG*CKCIPR
Trigger: GCGTGGAATACACTTACACCATCCAAGTCCTGCGAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCTGTCACCTGCATCTaGGACGGCTTGTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSVTCI*DGLSIS
Trigger: AGAAATTGACAAGCCGTCCCAGATGCAGGTGACAGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCATTTTTGGGAGTGGTaGTCACTCTGTAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESHFWEW*SLCSLS
Trigger: TGACAGGCTACAGAGTGACCACCACTCCCAAAAATG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTCCTAGGCCATTTTTaGGAGTGGTGGTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVLGHF*EWWSLC
Trigger: ACAGAGTGACCACCACTCCCAAAAATGGCCTAGGAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTCCTAGGCCATTTTTaGGAGTGGTGGTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVLGHF*EWWSLC
Trigger: ACAGAGTGACCACCACTCCCAAAAATGGCCTAGGAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAATTCCAATCAGGGGCTaGCTCTCCATATCATCGTGC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQIPIRG*LSISSC
Trigger: GCACGATGATATGGAGAGCCAGCCCCTGATTGGAAT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGATTCCAATCAGGGGCTaGCTCTCCATATCATCGTGC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVIPIRG*LSISSC
Trigger: GCACGATGATATGGAGAGCCAGCCCCTGATTGGAAT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGGTGGGCGCAGGAATaGCTGTGGACTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGWWAQE*LWTGFQ
Trigger: TTGGAATCCAGTCCACAGCCATTCCTGCGCCCACCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGGATGGCATCGACTTaGAAGCCAGTGATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGMAST*KPVIVS
Trigger: AGAGACAATCACTGGCTTCCAAGTCGATGCCATCCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGGGATGGCATCGACTTaGAAGCCAGTGATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQGMAST*KPVIVS
Trigger: AGAGACAATCACTGGCTTCCAAGTCGATGCCATCCC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGGATGGCATCGACTTaGAAGCCAGTGATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGMAST*KPVIVS
Trigger: AGAGACAATCACTGGCTTCCAAGTCGATGCCATCCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGTCTGGCCATTGGCTaGGATGGCATCGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGLAIG*DGIDLE
Trigger: TTCCAAGTCGATGCCATCCCAGCCAATGGCCAGACC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGAAGGGTAACCAGTTaGGGAAGCTCATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGRVTS*GSSSVF
Trigger: GAAGACAGATGAGCTTCCCCAACTGGTTACCCTTCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGAAGGGTAACCAGTTaGGGAAGCTCATCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGRVTS*GSSSVF
Trigger: GAAGACAGATGAGCTTCCCCAACTGGTTACCCTTCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTACATTCGGCAGGTATaGTCTTGGCCTAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVYIRQV*SWPKPD
Trigger: GTCAGGCTTAGGCCAAGACCATACCTGCCGAATGTA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAATACATTCGGCAGGTATaGTCTTGGCCTAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQYIRQV*SWPKPD
Trigger: GTCAGGCTTAGGCCAAGACCATACCTGCCGAATGTA...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTACATTCGGCAGGTATaGTCTTGGCCTAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGYIRQV*SWPKPD
Trigger: GTCAGGCTTAGGCCAAGACCATACCTGCCGAATGTA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGACGGCGTCCAAGAGATaGTTGTCTGAGAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGTASKR*LSEREL
Trigger: AAGCTCTCTCTCAGACAACCATCTCTTGGACGCCGT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAAGTTCCAGGAACTTaGAACTGTAAGGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESEVPGT*NCKGSS
Trigger: CGAAGAGCCCTTACAGTTCCAAGTTCCTGGAACTTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGACCTTGTGCCTCCTCTaGTTCTGCAGTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGTLCLL*FCSAST
Trigger: AGTGGAGGCACTGCAGAACCAGAGGAGGCACAAGGT...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACCAAAGCCCAAGCACTaGCATGTGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQPKPKH*HVSLKP
Trigger: TGGCTTTAAGCTCACATGCCAGTGCTTGGGCTTTGG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCCAAAGCCCAAGCACTaGCATGTGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVPKPKH*HVSLKP
Trigger: TGGCTTTAAGCTCACATGCCAGTGCTTGGGCTTTGG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCCAAAGCCCAAGCACTaGCATGTGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGPKPKH*HVSLKP
Trigger: TGGCTTTAAGCTCACATGCCAGTGCTTGGGCTTTGG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGATGTCCGGGTGTCCTaGTCGTTGCATCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGDVRVS*SLHLFL
Trigger: CAGAAACAGATGCAACGATCAGGACACCCGGACATC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCCCAATGCGATACATaGCCCCTTCATTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPQCDT*PLHWLC
Trigger: GCACAACCAATGAAGGGGTCATGTATCGCATTGGGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAAGTGCAGGAACTCTaGTCAGCATGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQKVQEL*SAWTTS
Trigger: AGAAGTGGTCCATGCTGATCAGAGTTCCTGCACTTT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAAAGTGCAGGAACTCTaGTCAGCATGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVKVQEL*SAWTTS
Trigger: AGAAGTGGTCCATGCTGATCAGAGTTCCTGCACTTT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGTCACAGGAGAAGTTaGAGGCAGCCACCTGACACT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGCHRRS*RQPPDT
Trigger: AGTGTCAGGTGGCTGCCTTCAACTTCTCCTGTGACA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTTGGTCACTGCAGTTTaGACCAGGGGCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLVTAV*TRGWLS
Trigger: AGAAAGCCAGCCCCTGGTTCAAACTGCAGTGACCAA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACGACTTGGAAGCCAGTaGTTGTCTCTGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQRLGSQ*LSLSLF
Trigger: GAACAAAGACAGAGACAATCACTGGCTTCCAAGTCG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCGACTTGGAAGCCAGTaGTTGTCTCTGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGRLGSQ*LSLSLF
Trigger: GAACAAAGACAGAGACAATCACTGGCTTCCAAGTCG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCGACTTGGAAGCCAGTaGTTGTCTCTGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVRLGSQ*LSLSLF
Trigger: GAACAAAGACAGAGACAATCACTGGCTTCCAAGTCG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTTGTGCCAGGAAGCTaGATACCATTTTCGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVVPGS*IPFSVS
Trigger: TGACACCGAAAATGGTATTCAGCTTCCTGGCACAAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTTGTGCCAGGAAGCTaGATACCATTTTCGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVVPGS*IPFSVS
Trigger: TGACACCGAAAATGGTATTCAGCTTCCTGGCACAAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGTTGTGCCAGGAAGCTaGATACCATTTTCGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGVVPGS*IPFSVS
Trigger: TGACACCGAAAATGGTATTCAGCTTCCTGGCACAAC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCCTGGTTGGCATGAAATaGTGTACTCAGAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLVGMK*CTQNSP
Trigger: AGGAGAGTTCTGAGTACATCATTTCATGCCAACCAG...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGCCAACTGGTTGGCATaGAATGATGTACTCAGAACT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESANWLA*NDVLRT
Trigger: AGTTCTGAGTACATCATTTCATGCCAACCAGTTGGC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTAAGGGTCAAAGCATaGGTCATCTGTAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVRVKA*VICRLV
Trigger: AACCAGCCTACAGATGACTCATGCTTTGACCCTTAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTCCGATCTTGTAGTTaGCACCGTTGTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLRSCS*HRCHGT
Trigger: GGTGCCATGACAACGGTGTCAACTACAAGATCGGAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCATGGGGATCACACTTaGATTCTCCCTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVHGDHT*ILPFHS
Trigger: GGAATGGAAAGGGAGAATTCAAGTGTGATCCCCATG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACATGGGGATCACACTTaGATTCTCCCTTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQHGDHT*ILPFHS
Trigger: GGAATGGAAAGGGAGAATTCAAGTGTGATCCCCATG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGCACATCTAGCGGCATaGAGCACTCAATGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGAHLAA*STQWGN
Trigger: ATTGCCCCATTGAGTGCTTCATGCCGCTAGATGTGC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTCTGCCATTGCCTGTaGAGACACACTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLCHCL*RHTEAG
Trigger: ACCTGCTTCAGTGTGTCTGCACAGGCAATGGCAGAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAAACCGCATGGTCTGTaGAGAAGGAATACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESKPHGL*RRNTSG
Trigger: ACCAGAAGTATTCCTTCTGCACAGACCATGCGGTTT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCATTTCATGTTGTCCCTaGGACCCTCAGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESISCCP*DPQKYS
Trigger: ACTGTACTTCTGAGGGTCGCAGGGACAACATGAAAT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CTGGTGGTGAAGTCGAAGCGTGTCACTTCTCTGTGGCCATACTGCTGGATGCTGATTTCATGTTGTCCCTaGGACCCTCAGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: LVVKSKRVTSLWPYCWMLISCCP*DPQKYS
Trigger: ACTGTACTTCTGAGGGTCGCAGGGACAACATGAAAT...CAGCATCCAGCAGTATGGCCACAGAGAAGTGACACGCTTCGACTTCACCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGAGGATTGCTTTCCCTaGCCTGGTGCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGEDCFP*PGAQQR
Trigger: TCTTTGCTGTGCACCAGGGCAGGGAAAGCAATCCTC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAGCCAGACACAACAATaGTCCCAGAGTCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSQTQQ*SQSLKS
Trigger: TGACTTCAGACTCTGGGAGCATTGTTGTGTCTGGCT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAGCCAGACACAACAATaGTCCCAGAGTCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSQTQQ*SQSLKS
Trigger: TGACTTCAGACTCTGGGAGCATTGTTGTGTCTGGCT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGATCCACATCAGTGAATaGCAGTCCTTTAGGGCGATC +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGIHISE*QSFRAI
Trigger: GATCGCCCTAAAGGACTGGCATTCACTGATGTGGAT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAATCCACATCAGTGAATaGCAGTCCTTTAGGGCGATC +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQIHISE*QSFRAI
Trigger: GATCGCCCTAAAGGACTGGCATTCACTGATGTGGAT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTGTACCTGGAAACTTaGCCCTGTGGGCTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLYLET*PCGLSQ
Trigger: TTGGGAAAGCCCACAGGGGCAAGTTTCCAGGTACAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGTCTTCACCATCAGGTaGAGGGAAAAGCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGVFTIR*REKLPD
Trigger: ATCCGGGAGCTTTTCCCTGCACCTGATGGTGAAGAC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCTCTCCATATCATCGTaGAAGGCAACCACACTGACT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGLSISS*KATTLT
Trigger: AGTCAGTGTGGTTGCCTTGCACGATGATATGGAGAG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTCTCCATATCATCGTaGAAGGCAACCACACTGACT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLSISS*KATTLT
Trigger: AGTCAGTGTGGTTGCCTTGCACGATGATATGGAGAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR GCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTCAAAGATCATTTGTTaGCCAACACTGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESSKIIC*PTLGCW
Trigger: CCAGCAACCCAGTGTTGGGCAACAAATGATCTTTGA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188894.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGCCTCCTCTGGTTCTaGAGTGCCTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGCLLWF*SASTMM
Trigger: CATCATAGTGGAGGCACTGCAGAACCAGAGGAGGCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTCGTGGGCAGCCATTaGGCAGAATCCAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLVGSH*AESKLL
Trigger: CAGAAGTTTGGATTCTGCCCAATGGCTGCCCACGAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGTGCACCTCATCATGTaGCCCAGGTCATGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGVHLIM*PRSCCL
Trigger: TAAGCAGCATGACCTGGGCCACATGATGAGGTGCAC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTTGGCACTGGTCAATaGGGTCACACTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLGTGQ*GHTSIC
Trigger: GCAGATGGAAGTGTGACCCCATTGACCAGTGCCAAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCGTGTCACTTCTCTGTaGCCATACTGCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGRVTSL*PYCWML
Trigger: CAGCATCCAGCAGTATGGCCACAGAGAAGTGACACG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTTACAGATTCAGAAGTaGCCACAACAGGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESLQIQK*PQQESR
Trigger: CCTACTCTCCTGTTGTGGCCACTTCTGAATCTGTAA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGTTTCATTGACAAACTaGAGGTTAGTGGGAGCGTCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVVSLTN*RLVGAS
Trigger: CGACGCTCCCACTAACCTCCAGTTTGTCAATGAAAC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAGTTTCATTGACAAACTaGAGGTTAGTGGGAGCGTCG +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQVSLTN*RLVGAS
Trigger: CGACGCTCCCACTAACCTCCAGTTTGTCAATGAAAC...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGTCTGAAGGTGAAATaGATAGCTCTGCAACGTCCT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCLKVK*IALQRP
Trigger: AGGACGTTGCAGAGCTATCCATTTCACCTTCAGACA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGAATATCAGAAACTGTaGCTTGCTGGCCAATCAGTG +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESEYQKL*LAGQSV
Trigger: CACTGATTGGCCAGCAAGCCACAGTTTCTGATATTC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGCACAGTGAACTCCTaGACAGGGCTATTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGTVNS*TGLFPP
Trigger: AGGAGGAAATAGCCCTGTCCAGGAGTTCACTGTGCC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGTCTGTCACCTGCATCTaGGACGGCTTGTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGSVTCI*DGLSIS
Trigger: AGAAATTGACAAGCCGTCCCAGATGCAGGTGACAGA...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGTCACCTGCATCTaGGACGGCTTGTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVSVTCI*DGLSIS
Trigger: AGAAATTGACAAGCCGTCCCAGATGCAGGTGACAGA...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACATTTTTGGGAGTGGTaGTCACTCTGTAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQHFWEW*SLCSLS
Trigger: TGACAGGCTACAGAGTGACCACCACTCCCAAAAATG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGCATTTTTGGGAGTGGTaGTCACTCTGTAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGHFWEW*SLCSLS
Trigger: TGACAGGCTACAGAGTGACCACCACTCCCAAAAATG...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCATTTTTGGGAGTGGTaGTCACTCTGTAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVHFWEW*SLCSLS
Trigger: TGACAGGCTACAGAGTGACCACCACTCCCAAAAATG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGGCCATTTTTGGGAGTaGTGGTCACTCTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGGHFWE*WSLCSL
Trigger: CAGGCTACAGAGTGACCACCACTCCCAAAAATGGCC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGGAAACTTGCCCCTGTaGGCTTTCCCAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVGNLPL*AFPSNF
Trigger: AAAATTGCTTGGGAAAGCCCACAGGGGCAAGTTTCC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGGAAACTTGCCCCTGTaGGCTTTCCCAAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGGNLPL*AFPSNF
Trigger: AAAATTGCTTGGGAAAGCCCACAGGGGCAAGTTTCC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000055226.13
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGTAGTGATGACTCCCTaGGCTGGTCTGCTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGVVMTP*AGLLVS
Trigger: ACTGACAAGCAGACCAGCCCAGGGAGTCATCACTAC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCGGGTCTTTTGAACTGTaGAGGGAACATCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESGSFEL*REHPRS
Trigger: AGATCTTGGATGTTCCCTCCACAGTTCAAAAGACCC...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000188894.7
CDS-3UTR CCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGAAGTTCCAGGAACTTaGAACTGTAAGGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVEVPGT*NCKGSS
Trigger: CGAAGAGCCCTTACAGTTCCAAGTTCCTGGAACTTC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGAGTCATCTGTAGGCTaGTTCAGGCCTTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGESSVG*FRPSLT
Trigger: TGTCAGCGAAGGCCTGAACCAGCCTACAGATGACTC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCCCACTCCTCTCCAATaGCGTAATGGGAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGPTPLQ*RNGKPC
Trigger: ACACGGTTTCCCATTACGCCATTGGAGAGGAGTGGG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCACGTGCAGGAGCAAATaGCTCCGAGATATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESTCRSK*LRDILS
Trigger: AGAAAGAATATCTCGGAGCCATTTGCTCCTGCACGT...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR CCA 90 bp CTGGATGCTGATGAGCTGTCCCTCATAGATCACACCTGGGGTCAGGCCTTTGATGAATTGGGCAGCCATTaGGCAGAATCCAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: LDADELSLIDHTWGQAFDELGSH*AESKLL
Trigger: CAGAAGTTTGGATTCTGCCCAATGGCTGCCCAATTC...ATCAAAGGCCTGACCCCAGGTGTGATCTATGAGGGACAGCTCATCAGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186613.2
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGACGTCCCAGCAGCATaGTCAAAACACTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGDVPAA*SKHFSA
Trigger: AGCTGAGAAGTGTTTTGATCATGCTGCTGGGACGTC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGTGCTGCTTATCCCACTaGTCCCCAATGCGATACATG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGCCLSH*SPMRYM
Trigger: CATGTATCGCATTGGGGATCAGTGGGATAAGCAGCA...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCAAAGGTATTTCTGTTaGCAGGCAGCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGQRYFC*QAASAH
Trigger: ATGGGCAGAGGCTGCCTGTCAACAGAAATACCTTTG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCAGGGGACAGCCCAGTaGTTTCAGCAAAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGQGTAQ*FQQRYF
Trigger: GAAATACCTTTGCTGAAATCACTGGGCTGTCCCCTG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCTGTGTAGTATCCTACTaGGGAGTCCACAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: HSHRPCPDSAAGQMAKESCVVSY*GVHKIF
Trigger: GAAGATTTTGTGGACTCCTCAGTAGGATACTACACA...GCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000055226.13
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGCTGTCTCTCCGTAGGTaGTTCTGTAATAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGLSLRR*FCNSAQ
Trigger: CTGTGCGCTATTACAGAATCACCTACGGAGAGACAG...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGCTGGTTGGCATGAAATaGTGTACTCAGAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVLVGMK*CTQNSP
Trigger: AGGAGAGTTCTGAGTACATCATTTCATGCCAACCAG...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAACTGGTTGGCATGAAATaGTGTACTCAGAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQLVGMK*CTQNSP
Trigger: AGGAGAGTTCTGAGTACATCATTTCATGCCAACCAG...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGGCCAACTGGTTGGCATaGAATGATGTACTCAGAACT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVANWLA*NDVLRT
Trigger: AGTTCTGAGTACATCATTTCATGCCAACCAGTTGGC...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGGCCAACTGGTTGGCATaGAATGATGTACTCAGAACT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGANWLA*NDVLRT
Trigger: AGTTCTGAGTACATCATTTCATGCCAACCAGTTGGC...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR TCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGAATCGCATCTGAAATaGCCACTGCCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGESHLK*PLPKPK
Trigger: CTTGGGCTTTGGCAGTGGTCATTTCAGATGCGATTC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TCTGCTAACATCACTGGGGTGTGGATTGACCTTGGTAGAGAGACACTTGTAGGGGCTCCCCGTTTGAATTaGCACCATAAGTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SANITGVWIDLGRETLVGAPRLN*HHKSGS
Trigger: TGACCCAGACTTATGGTGGCAATTCAAACGGGGAGC...CCCTACAAGTGTCTCTCTACCAAGGTCAATCCACACCCCAGTGATGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp ACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGAAACCGCATGGTCTGTaGAGAAGGAATACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TGHVLTVLQVRWQKKAEVKPHGL*RRNTSG
Trigger: ACCAGAAGTATTCCTTCTGCACAGACCATGCGGTTT...CACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAACCGCATGGTCTGTaGAGAAGGAATACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQKPHGL*RRNTSG
Trigger: ACCAGAAGTATTCCTTCTGCACAGACCATGCGGTTT...TTGCCATCTGACCTGCAGCACTGTCAGGACATGGCCTGTGGCTGTGTGTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp CATGTCCTGACAGTGCTGCAGGTCAGATGGCAAAAGAAAGCAGAGGTGTCTGGGAAACCGCATGGTCTGTaGAGAAGGAATACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HVLTVLQVRWQKKAEVSGKPHGL*RRNTSG
Trigger: ACCAGAAGTATTCCTTCTGCACAGACCATGCGGTTT...CCCAGACACCTCTGCTTTCTTTTGCCATCTGACCTGCAGCACTGTCAGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000055226.13
ENSMUST00000186129.7
ENSMUST00000187938.7
ENSMUST00000188674.7
ENSMUST00000188894.7
ENSMUST00000189821.7
ENSMUST00000190780.7
CDS-3UTR GCA 90 bp TTTGAACACACAGCCACAGGCCATGTCCTGACAGTGCTGCAGGTCAGATGGCAAATTTCATGTTGTCCCTaGGACCCTCAGAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: FEHTATGHVLTVLQVRWQISCCP*DPQKYS
Trigger