Pregenerated sensors for FMO9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026560Ensembl transcript IDs: ENSMUST00000027843.11, ENSMUST00000148677.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATaGACGTGGGCATTTTTCCCCCTCCCAGTGGAACAAGTGAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLWHRILSIPFQFPK*TWAFFPLPVEQVSL Trigger: AAGGCTCACTTGTTCCACTGGGAGGGGGAAAAATGCCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATCCCAGGTCAGAAAGCCAGGTaGACTGACAGGACAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLLALLDLQQQGSHLFIPGQKAR*TDRTAS Trigger: GCTGGCTGTCCTGTCAGTTCACCTGGCTTTCTGACC...TGGGATAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR CAA 90 bp | TTCAGCTTCTTGACGTGCCCTCTGGGATGCGAGGTCATATGCTCCTaGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: FSFLTCPLGCEVICS*VSLLGLHTFFPWLF Trigger: AAACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGACCTCGCATCCCAGAGGGCACGTCAAGAAGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGCATTCGAGGTAAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGCTTTTATGGTCCACTTaGAGGCAAAAATCTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KAFEVKKPSGTPGPPTARLLWST*RQKSLQ Trigger: CTGGAGAGATTTTTGCCTCCAAGTGGACCATAAAAG...CCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTTACCTCGAATGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR CAA 90 bp | ACGTGGGCATTTTTCCCCCTCCCAGTGGAACAAGTGAGCCTTCAGTaGAGATACTCTGCTGAGAGAGTAAGAGATTTCTCGGCAAATAAC | + |
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Preference number: 2 (lower is better) Translates to: TWAFFPLPVEQVSLQ*RYSAERVRDFSANN Trigger: GTTATTTGCCGAGAAATCTCTTACTCTCTCAGCAGAGTATCTCAACTGAAGGCTCACTTGTTCCACTGGGAGGGGGAAAAATGCCCACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR GCA 90 bp | AAGGCATTCGAGGTAAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGGCAGAGACTCATGGTTaGTACTTAAATCTTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: KAFEVKKPSGTPGPPTARAETHG*YLNLHS Trigger: GGAATGAAGATTTAAGTAGCAACCATGAGTCTCTGC...CCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTTACCTCGAATGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTACACATAGGGAGAGAGTaGTCAGAAAGCCAGGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLHIGRE*SESQVN Trigger: GTTCACCTGGCTTTCTGACCACTCTCTCCCTATGTG...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGACACTTTCTGAAAGTTaGTGGAATGAGAAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SCGTEFSPFLSSSRNARGTLSES*WNEKAF Trigger: GAATGCCTTCTCATTCCACCAACTTTCAGAAAGTGT...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR CAA 90 bp | CCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTTaGAGGTTTTATAGTCAGGAGAACAAAATGACAGAGGTGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: PWSPYLVFTPSSHGC*RFYSQENKMTEVES Trigger: AGACTCCACCTCTGTCATTTTGTTCTCCTGACTATAAAACCTCAAACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTCTTTTATGGTCCACTTaGAGGCAAAAATCTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCLLWST*RQKSLQ Trigger: CTGGAGAGATTTTTGCCTCCAAGTGGACCATAAAAG...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGAAGTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCCAGCAGAGACTCATaGTTGCTACTTAAATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QWKSCGTEFSPFLSSSRNASRDS*LLLKSS Trigger: TGAAGATTTAAGTAGCAACCATGAGTCTCTGCTGGC...ATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGACTTCCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR CCA 90 bp | GTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGATGATTATGTTATCGTTTTTCCCGAAATGCACGTaGGCATTTTTCCCCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VNGSCGQVQTHQMIMLSFFPKCT*AFFPLP Trigger: TGGGAGGGGGAAAAATGCCCACGTGCATTTCGGGAA...AAACGATAACATAATCATCTGATGAGTTTGCACTTGACCACAGGAACCATTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR GCA 90 bp | GATGATTATGTTATCGTTTTGAGTAGCAGTGGAAGTCTTGTGGCACAGAATTCTTTCCAGTTCCCGAAATaGACGTGGGCATTTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: DDYVIVLSSSGSLVAQNSFQFPK*TWAFFP Trigger: GGGGAAAAATGCCCACGTGCATTTCGGGAACTGGAA...AGAATTCTGTGCCACAAGACTTCCACTGCTACTCAAAACGATAACATAATCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTTATAACCAACCTTGGTaGAACCTTTTATGGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCYNQPW*NLLWST Trigger: AGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTACACTTTCTGAAAGTTaGTGGAATGAGAAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCTLSES*WNEKAF Trigger: GAATGCCTTCTCATTCCACCAACTTTCAGAAAGTGT...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGTTGTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGATGATTATGTATAACCAACCTTGGTaGAACCTTTTATGGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: PAVVNGSCGQVQTHQMIMYNQPW*NLLWST Trigger: AGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA...CATAATCATCTGATGAGTTTGCACTTGACCACAGGAACCATTGACAACTGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR TCA 72 bp | CACATAGGGAGAGAGTGGTCAGAAAGCCAGGTGAACTaGCAGGACAGCCAGCAGAGACTCATGGTTGCTACT | + |
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Preference number: 3 (lower is better) Translates to: HIGREWSESQVN*QDSQQRLMVAT Trigger: AGTAGCAACCATGAGTCTCTGCTGGCTGTCCTGTCAGTTCACCTGGCTTTCTGACCACTCTCTCCCTATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR GCA 72 bp | CACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATaGACGTGGGCATTTTTCCCCCTCCCAGTGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: HRILSIPFQFPK*TWAFFPLPVEQ Trigger: TTGTTCCACTGGGAGGGGGAAAAATGCCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGCCTTTTATGGTCCACTaGGAGGCAAAAATCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SCGTEFSPFLSSSRNARGPFMVH*EAKISP Trigger: TGGAGAGATTTTTGCCTCCAAGTGGACCATAAAAGG...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR GCA 72 bp | GGTGAACTGACAGGACAGCCAGCAGAGACTCATGGTTaGTACTTAAATCTTCATTCCATCTTAACACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GELTGQPAETHG*YLNLHSILTQH Trigger: GTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCAACCATGAGTCTCTGCTGGCTGTCCTGTCAGTTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR CCA 72 bp | GACAGAGGTGGAGTCTTAGGAACACTTTCTGAAAGTTaGTGGAATGAGAAGGCATTCGAGGTAAAGAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: DRGGVLGTLSES*WNEKAFEVKKP Trigger: AGGCTTCTTTACCTCGAATGCCTTCTCATTCCACCAACTTTCAGAAAGTGTTCCTAAGACTCCACCTCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAGAACAAAATGACAGAGGTGGAGTCTTAGGAACACTTTCTGAAAGTTGGCCTTTTATGGTCCACTaGGAGGCAAAAATCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SGEQNDRGGVLGTLSESWPFMVH*EAKISP Trigger: TGGAGAGATTTTTGCCTCCAAGTGGACCATAAAAGG...CCAACTTTCAGAAAGTGTTCCTAAGACTCCACCTCTGTCATTTTGTTCTCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| 3UTR TCA 72 bp | CAAGTGCAAACTCATCAGATGATTATGTTATCGTTTTaGGTAGCAGTGGAAGTCTTGTGGCACAGAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: QVQTHQMIMLSF*VAVEVLWHRIL Trigger: GAGAATTCTGTGCCACAAGACTTCCACTGCTACTCAAAACGATAACATAATCATCTGATGAGTTTGCACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| 3UTR-3UTR CAA 90 bp | GTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGATGATTATGTTATCGTTTAGCAGAGACTCATGGTaGCTACTTAAATCTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: VNGSCGQVQTHQMIMLSFSRDSW*LLKSSF Trigger: GAATGAAGATTTAAGTAGCAACCATGAGTCTCTGCT...AAACGATAACATAATCATCTGATGAGTTTGCACTTGACCACAGGAACCATTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGGGGGTGCTGGCTCAGTaGTCTGTGCTGTGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCGTEFSPFLSSSRNARGGVLAQ*SVLWLQ Trigger: CTGCAGCCACAGCACAGACCACTGAGCCAGCACCCC...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | AAGGCATTCGAGGTAAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGTGGAAAGGACTTGAGTaGCAGGTGGGGGTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: KAFEVKKPSGTPGPPTARWKGLE*QVGVCV Trigger: CACACAGACCCCCACCTGCCACTCAAGTCCTTTCCA...CCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTTACCTCGAATGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR GCA 90 bp | AAATGCACGTGGGCATTTTTCCCCCTCCCAGTGGAACAAGTGAGCCTTCAGTTGCTGTGTGATGGCCACTaGAGACCAGGACCCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: KCTWAFFPLPVEQVSLQLLCDGH*RPGPHQ Trigger: TTGATGGGGTCCTGGTCTGCAGTGGCCATCACACAG...CAACTGAAGGCTCACTTGTTCCACTGGGAGGGGGAAAAATGCCCACGTGCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | GAAGCCATTTATTTATCCCACATAGGGAGAGAGTGGTCAGAAAGCCAGGTGAACCTCTCTGAGTCAGGATaGCTCTCCGGGCCCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: EAIYLSHIGREWSESQVNLSESG*LSGPHP Trigger: GGGATGGGGCCCGGAGAGCCATCCTGACTCAGAGAG...GTTCACCTGGCTTTCTGACCACTCTCTCCCTATGTGGGATAAATAAATGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTACAGGAGCAGGAGGTTaGGCTTCACCCCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCTGAGG*ASPQPE Trigger: CTCTGGCTGGGGTGAAGCCCAACCTCCTGCTCCTGT...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR TCA 90 bp | TATAACCAACCTTGGTGGAACCTTTTATGGTCCACTTGGAGGCAAAAATCTCTCAGGTGGGGGTCTGTGTaGTGGCCACTGCAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: YNQPWWNLLWSTWRQKSLRWGSV*WPLQTR Trigger: CCTGGTCTGCAGTGGCCATCACACAGACCCCCACCT...GAGAGATTTTTGCCTCCAAGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | TATAACCAACCTTGGTGGAACCTTTTATGGTCCACTTGGAGGCAAAAATCTCTCGGGGTGCTGGCTCAGTaGTCTGTGCTGTGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YNQPWWNLLWSTWRQKSLGVLAQ*SVLWLQ Trigger: CTGCAGCCACAGCACAGACCACTGAGCCAGCACCCC...GAGAGATTTTTGCCTCCAAGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTACTGATGGTGGGGTGCTaGCTCAGTGGTCTGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLLMVGC*LSGLCC Trigger: ACAGCACAGACCACTGAGCCAGCACCCCACCATCAG...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCATTTATTTATCCCACATAGGGAGAGAGTGGTCAGAAAGCCAGGTGAACCTGATGGTGGGGTGCTaGCTCAGTGGTCTGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EAIYLSHIGREWSESQVNLMVGC*LSGLCC Trigger: ACAGCACAGACCACTGAGCCAGCACCCCACCATCAG...GTTCACCTGGCTTTCTGACCACTCTCTCCCTATGTGGGATAAATAAATGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | AGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATCCCAACAGCCCAGCGAGACTaGAGTTCTGCAATAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SLLALLDLQQQGSHLFIPTAQRD*SSAIGR Trigger: CCTACCTATTGCAGAACTCCAGTCTCGCTGGGCTGT...TGGGATAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR TCA 90 bp | AAGGCATTCGAGGTAAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGGTGCCATCATCAAAATaGACATCCGTTCCTGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: KAFEVKKPSGTPGPPTARVPSSK*TSVPVN Trigger: GTTCACAGGAACGGATGTTCATTTTGATGATGGCAC...CCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTTACCTCGAATGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | AGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATCCCACCCATCCCATTTCCCTaGACCTTGCAAACGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: SLLALLDLQQQGSHLFIPPIPFP*TLQTVL Trigger: CAATACCGTTTGCAAGGTCCAGGGAAATGGGATGGG...TGGGATAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR TCA 90 bp | GATGATTATGTTATCGTTTTGAGTAGCAGTGGAAGTCTTGTGGCACAGAATTCTAGGTGGGGGTCTGTGTaGTGGCCACTGCAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: DDYVIVLSSSGSLVAQNSRWGSV*WPLQTR Trigger: CCTGGTCTGCAGTGGCCATCACACAGACCCCCACCT...AGAATTCTGTGCCACAAGACTTCCACTGCTACTCAAAACGATAACATAATCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTCAGTGGTCTGTGCTGTaGCTGCAGACCATAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCQWSVL*LQTIMC Trigger: GCACATTATGGTCTGCAGCCACAGCACAGACCACTG...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGAAGTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATATGATGCCCAATGGCTaGATGAGCCCAATGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: QWKSCGTEFSPFLSSSRNMMPNG*MSPMTA Trigger: GGCTGTCATTGGGCTCATCCAGCCATTGGGCATCAT...ATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGACTTCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | CAGTGGAAGTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATACAGCCCAGCGAGACTaGAGTTCTGCAATAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QWKSCGTEFSPFLSSSRNTAQRD*SSAIGR Trigger: CCTACCTATTGCAGAACTCCAGTCTCGCTGGGCTGT...ATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGACTTCCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGCTTGGATTGTGTGCCTaGCTGTCTTTACATACCGTT | + |
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Preference number: 4 (lower is better) Translates to: SCGTEFSPFLSSSRNARGLGLCA*LSLHTV Trigger: AACGGTATGTAAAGACAGCCAGGCACACAATCCAAG...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | GTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGATGATTATGTTATCGTTTACAGGAGCAGGAGGTTaGGCTTCACCCCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VNGSCGQVQTHQMIMLSFTGAGG*ASPQPE Trigger: CTCTGGCTGGGGTGAAGCCCAACCTCCTGCTCCTGT...AAACGATAACATAATCATCTGATGAGTTTGCACTTGACCACAGGAACCATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTACTCTCTGAGTCAGGATaGCTCTCCGGGCCCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLLSESG*LSGPHP Trigger: GGGATGGGGCCCGGAGAGCCATCCTGACTCAGAGAG...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCATTTATTTATCCCACATAGGGAGAGAGTGGTCAGAAAGCCAGGTGAACGGACTTTTCCGGAGATaGTGTGGTTTGGAAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: EAIYLSHIGREWSESQVNGLFRR*CGLEGH Trigger: ATGACCTTCCAAACCACATCATCTCCGGAAAAGTCC...GTTCACCTGGCTTTCTGACCACTCTCTCCCTATGTGGGATAAATAAATGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTACATCCCATTGTCCATaGATGTGGAAGTCTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCTSHCP*MWKSGR Trigger: ACGTCCAGACTTCCACATCCATGGACAATGGGATGT...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTACCATGTCTGCCTTCATaGCCTTCACTGAGGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLPCLPS*PSLRVI Trigger: AATTACCCTCAGTGAAGGCCATGAAGGCAGACATGG...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTCCATGTCTGCCTTCATaGCCTTCACTGAGGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCPCLPS*PSLRVI Trigger: AATTACCCTCAGTGAAGGCCATGAAGGCAGACATGG...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGAAGTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGAACCGAGTGAAAAATaGACTATCCATGGGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWKSCGTEFSPFLSSSRNEPSEK*TIHGIA Trigger: GGCTATCCCATGGATAGTTCATTTTTCACTCGGTTC...ATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGACTTCCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATTTCCGGAGATGATGTaGTTTGGAAGGTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLFPEMM*FGRSSL Trigger: CAGTGATGACCTTCCAAACCACATCATCTCCGGAAA...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTACTTGGATTGTGTGCCTaGCTGTCTTTACATACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLLGLCA*LSLHTV Trigger: AACGGTATGTAAAGACAGCCAGGCACACAATCCAAG...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCATTTATTTATCCCACATAGGGAGAGAGTGGTCAGAAAGCCAGGTGAACAGCTATGGAACCGAGTaGAAAATGAACTATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EAIYLSHIGREWSESQVNSYGTE*KMNYPW Trigger: CCATGGATAGTTCATTTTTCACTCGGTTCCATAGCT...GTTCACCTGGCTTTCTGACCACTCTCTCCCTATGTGGGATAAATAAATGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR GCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGCTGTGTGATGGCCACTaGAGACCAGGACCCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTELCDGH*RPGPHQ Trigger: TTGATGGGGTCCTGGTCTGCAGTGGCCATCACACAG...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTATGGAAAGGACTTGAGTaGCAGGTGGGGGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLWKGLE*QVGVCV Trigger: CACACAGACCCCCACCTGCCACTCAAGTCCTTTCCA...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGTTCTGGAGAAAGCTATaGAACCGAGTGAAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCGTEFSPFLSSSRNARGFWRKL*NRVKNE Trigger: TTCATTTTTCACTCGGTTCCATAGCTTTCTCCAGAA...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR TCA 90 bp | TCATATGCTCCTTGGTCTCCTTACTTGGTCTTCACACCTTCTTCCCATGGTTGTCAATGCCAACCACTATaGTTCTCTTTCCCACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SYAPWSPYLVFTPSSHGCQCQPL*FSFPHN Trigger: ATTATGTGGGAAAGAGAATCATAGTGGTTGGCATTG...ACAACCATGGGAAGAAGGTGTGAAGACCAAGTAAGGAGACCAAGGAGCATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTACATAATGTGCATGGTTaGATCTTGAGTTCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLHNVHG*ILSSES Trigger: AGACTCTGAACTCAAGATTCAACCATGCACATTATG...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGAAAATGAACTATCCATaGGATAGCCGTTATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLWHRILSIPFQFPKCTWKMNYP*DSRYSK Trigger: TTTGGAATAACGGCTATCCCATGGATAGTTCATTTT...CCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAAGTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGTGGTTAATATCTTCTaGAGAAAGCTATGGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: QWKSCGTEFSPFLSSSRNVVNIF*RKLWNR Trigger: TCGGTTCCATAGCTTTCTCCAGAAGATATTAACCAC...ATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGACTTCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTACAGTGGTCTGTGCTGTaGCTGCAGACCATAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLQWSVL*LQTIMC Trigger: GCACATTATGGTCTGCAGCCACAGCACAGACCACTG...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAATGATGCCCAATGGCTaGATGAGCCCAATGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLMMPNG*MSPMTA Trigger: GGCTGTCATTGGGCTCATCCAGCCATTGGGCATCAT...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | TATAACCAACCTTGGTGGAACCTTTTATGGTCCACTTGGAGGCAAAAATCTCTCCAAAGAAGACTTCCATaGCTAGTGTTGGATCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNQPWWNLLWSTWRQKSLQRRLP*LVLDPR Trigger: TCTCGGATCCAACACTAGCCATGGAAGTCTTCTTTG...GAGAGATTTTTGCCTCCAAGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGATGATTATGTTATCGTTTTGGCTTCTCCAGGTCTaGAGGGAACATCAGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VNGSCGQVQTHQMIMLSFWLLQV*REHQLI Trigger: TATAAGCTGATGTTCCCTCCAGACCTGGAGAAGCCA...AAACGATAACATAATCATCTGATGAGTTTGCACTTGACCACAGGAACCATTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGCCCATCCCATTTCCCTaGACCTTGCAAACGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEPIPFP*TLQTVL Trigger: CAATACCGTTTGCAAGGTCCAGGGAAATGGGATGGG...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR TCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGGGACTTTTCCGGAGATaGTGTGGTTTGGAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEGLFRR*CGLEGH Trigger: ATGACCTTCCAAACCACATCATCTCCGGAAAAGTCC...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR GCA 90 bp | GATGATTATGTTATCGTTTTGAGTAGCAGTGGAAGTCTTGTGGCACAGAATTCTTCCACTTGGATTGTGTaGCTGGCTGTCTTTACATAC | + |
|
Preference number: 4 (lower is better) Translates to: DDYVIVLSSSGSLVAQNSSTWIV*LAVFTY Trigger: GTATGTAAAGACAGCCAGGCACACAATCCAAGTGGA...AGAATTCTGTGCCACAAGACTTCCACTGCTACTCAAAACGATAACATAATCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAACATCCCATTGTCCATaGATGTGGAAGTCTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLTSHCP*MWKSGR Trigger: ACGTCCAGACTTCCACATCCATGGACAATGGGATGT...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGTGGCTTCTCCAGGTCTaGAGGGAACATCAGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEWLLQV*REHQLI Trigger: TATAAGCTGATGTTCCCTCCAGACCTGGAGAAGCCA...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | TATAACCAACCTTGGTGGAACCTTTTATGGTCCACTTGGAGGCAAAAATCTCTCTTCTGGAGAAAGCTATaGAACCGAGTGAAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YNQPWWNLLWSTWRQKSLFWRKL*NRVKNE Trigger: TTCATTTTTCACTCGGTTCCATAGCTTTCTCCAGAA...GAGAGATTTTTGCCTCCAAGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGCAAAGAAGACTTCCATaGCTAGTGTTGGATCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEQRRLP*LVLDPR Trigger: TCTCGGATCCAACACTAGCCATGGAAGTCTTCTTTG...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTTCCCAAGACTGTTTTAAACATAAGCACTTCTTGTGCATTCAAAAATGCTCTGAAGCATTCTTTTaGAATTTCCACAGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQDCFKHKHFLCIQKCSEAFF*NFHRPP Trigger: CGGAGGCCTGTGGAAATTTCAAAAGAATGCTTCAGA...GCATTTTTGAATGCACAAGAAGTGCTTATGTTTAAAACAGTCTTGGGAACTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR TCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAGCTATGGAACCGAGTaGAAAATGAACTATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLSYGTE*KMNYPW Trigger: CCATGGATAGTTCATTTTTCACTCGGTTCCATAGCT...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGTTCCCAAGACTGTTTTAAACATAAGCACTTCTTGTGCATTCAAAAATGCGTGCCATCATCAAAATaGACATCCGTTCCTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQDCFKHKHFLCIQKCVPSSK*TSVPVN Trigger: GTTCACAGGAACGGATGTTCATTTTGATGATGGCAC...GCATTTTTGAATGCACAAGAAGTGCTTATGTTTAAAACAGTCTTGGGAACTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGATAGCCTTTTTCCTTTaGTCCATGTCTGCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEIAFFL*SMSAFM Trigger: CATGAAGGCAGACATGGACCAAAGGAAAAAGGCTAT...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| 3UTR CAA 72 bp | TCAAGTGCAAACTCATCAGATGATTATGTTATCGTTTaGAGTAGCAGTGGAAGTCTTGTGGCACAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSANSSDDYVIV*SSSGSLVAQNS Trigger: AGAATTCTGTGCCACAAGACTTCCACTGCTACTCAAAACGATAACATAATCATCTGATGAGTTTGCACTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR GCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGTTCATTGTCAGTAACTaGAATCAGATCCCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEFIVSN*NQIPKE Trigger: TTCCTTGGGGATCTGATTGCAGTTACTGACAATGAA...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR GCA 90 bp | TGCTACTTAAATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTATTCATTGTCAGTAACTaGAATCAGATCCCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CYLNLHSILTQHSNDLFLFIVSN*NQIPKE Trigger: TTCCTTGGGGATCTGATTGCAGTTACTGACAATGAA...TAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATTTAAGTAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CCA 90 bp | AATCTTCATTCCATCTTAACACAGCACAGCAATGACCTGTTTCTAAATACTGAGGTGGTTAATATCTTCTaGAGAAAGCTATGGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLHSILTQHSNDLFLNTEVVNIF*RKLWNR Trigger: TCGGTTCCATAGCTTTCTCCAGAAGATATTAACCAC...CTCAGTATTTAGAAACAGGTCATTGCTGTGCTGTGTTAAGATGGAATGAAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS CCA 90 bp | GGTAATTTGCTCAGCCCTTTGAACACCCGCACAGCCCAGCGAGACTaGAGTTCTGCAATAGGTAGGATGATGCCCAATGGCTGGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNLLSPLNTRTAQRD*SSAIGRMMPNGWMS Trigger: GCTCATCCAGCCATTGGGCATCATCCTACCTATTGCAGAACTCCAGTCTCGCTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCATTCGAGGTAAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAATTTGCTCAGCCCTTaGAACACCCGCACAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KAFEVKKPSGTPGPPTARNLLSP*NTRTAQ Trigger: CTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATT...CCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTTACCTCGAATGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGAACAGGAGCAGGAGGTaGGGCTTCACCCCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCGTEFSPFLSSSRNARGNRSRR*GFTPAR Trigger: TCTGGCTGGGGTGAAGCCCAACCTCCTGCTCCTGTT...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTAAACAGGAGCAGGAGGTaGGGCTTCACCCCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLNRSRR*GFTPAR Trigger: TCTGGCTGGGGTGAAGCCCAACCTCCTGCTCCTGTT...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS CCA 90 bp | GGCTTCACCCCAGCCAGAGAGGCGATCTCATCCATGTACTCAATATaGTCCACTTGGATTGTGTGCCTGGCTGTCTTTACATACCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFTPAREAISSMYSI*STWIVCLAVFTYRF Trigger: GAAACGGTATGTAAAGACAGCCAGGCACACAATCCAAGTGGACCATATTGAGTACATGGATGAGATCGCCTCTCTGGCTGGGGTGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS CCA 90 bp | CCAGCCAGAGAGGCGATCTCATCCATGTACTCAATATGGTCCACTTaGATTGTGTGCCTGGCTGTCTTTACATACCGTTTCTCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAREAISSMYSIWST*IVCLAVFTYRFSIA Trigger: GGCTATGGAGAAACGGTATGTAAAGACAGCCAGGCACACAATCCAAGTGGACCATATTGAGTACATGGATGAGATCGCCTCTCTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATCATCCAAGCAGCACTaGATGGCTCCTAGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLSSKQH*MAPRPL Trigger: CAGTGGCCTAGGAGCCATCAAGTGCTGCTTGGATGA...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
||
| CDS-3UTR CAA 90 bp | AAGGCATTCGAGGTAAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGCATAGCCTTTTTCCTTaGGTCCATGTCTGCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KAFEVKKPSGTPGPPTARHSLFP*VHVCLH Trigger: ATGAAGGCAGACATGGACCAAAGGAAAAAGGCTATG...CCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTTACCTCGAATGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS TCA 90 bp | GCTCCACGGCAATGTCCACACCGGAATTCCCAATGCCAACCACTATaGTTCTCTTTCCCACATAATCCTCAGGACTTTTGTATTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: APRQCPHRNSQCQPL*FSFPHNPQDFCILG Trigger: GCCGAGAATACAAAAGTCCTGAGGATTATGTGGGAAAGAGAATCATAGTGGTTGGCATTGGGAATTCCGGTGTGGACATTGCCGTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATCCCATTCACTGAGGGTAATTaGCTCAGCCCTTTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: SLLALLDLQQQGSHLFIPFTEGN*LSPLNT Trigger: GGTGTTCAAAGGGCTGAGCAAATTACCCTCAGTGAA...TGGGATAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTATCCCATATGGTCCACTTGGATaGTGTGCCTGGCTGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLLALLDLQQQGSHLFIPYGPLG*CAWLSL Trigger: TAAAGACAGCCAGGCACACAATCCAAGTGGACCATA...TGGGATAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGAGAACAAAATGACAGAGGTGGAGTCTTAGGAACACTTTCTGAAAGTTGGAATTTGCTCAGCCCTTaGAACACCCGCACAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGEQNDRGGVLGTLSESWNLLSP*NTRTAQ Trigger: CTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATT...CCAACTTTCAGAAAGTGTTCCTAAGACTCCACCTCTGTCATTTTGTTCTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CAA 90 bp | AAAGAAGCCTTCTGGCACTCCTGGACCTCCAACAGCAAGGAAGCCATTTATTTACACAACAACATCCCATaGTCCATGGATGTGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: KEAFWHSWTSNSKEAIYLHNNIP*SMDVEV Trigger: GACTTCCACATCCATGGACAATGGGATGTTGTTGTG...TAAATAAATGGCTTCCTTGCTGTTGGAGGTCCAGGAGTGCCAGAAGGCTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACGTGGGTACAGGGACACTTCATaGTCAGTAACTGCAATCAGA | + |
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Preference number: 5 (lower is better) Translates to: SCGTEFSPFLSSSRNARGYRDTS*SVTAIR Trigger: TCTGATTGCAGTTACTGACAATGAAGTGTCCCTGTA...CCCACGTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CAA 90 bp | GGAAGTCTTGTGGCACAGAATTCTCTCCATTCCTTTCCAGTTCCCGAAATGCACCATAGCCTTTTTCCTTaGGTCCATGTCTGCCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GSLVAQNSLHSFPVPEMHHSLFP*VHVCLH Trigger: ATGAAGGCAGACATGGACCAAAGGAAAAAGGCTATG...GTGCATTTCGGGAACTGGAAAGGAATGGAGAGAATTCTGTGCCACAAGACTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CAA 90 bp | AGTAGTTTTCCAGCAGTTGTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGTTCACTGAGGGTAATTaGCTCAGCCCTTTGAACACC | + |
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Preference number: 5 (lower is better) Translates to: SSFPAVVNGSCGQVQTHQFTEGN*LSPLNT Trigger: GGTGTTCAAAGGGCTGAGCAAATTACCCTCAGTGAA...CTGATGAGTTTGCACTTGACCACAGGAACCATTGACAACTGCTGGAAAACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CAA 90 bp | AGTAGTTTTCCAGCAGTTGTCAATGGTTCCTGTGGTCAAGTGCAAACTCATCAGTATGGTCCACTTGGATaGTGTGCCTGGCTGTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: SSFPAVVNGSCGQVQTHQYGPLG*CAWLSL Trigger: TAAAGACAGCCAGGCACACAATCCAAGTGGACCATA...CTGATGAGTTTGCACTTGACCACAGGAACCATTGACAACTGCTGGAAAACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027843.11 |
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| CDS-3UTR CAA 90 bp | TATAACCAACCTTGGTGGAACCTTTTATGGTCCACTTGGAGGCAAAAATCTCTCCACAACAACATCCCATaGTCCATGGATGTGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: YNQPWWNLLWSTWRQKSLHNNIP*SMDVEV Trigger: GACTTCCACATCCATGGACAATGGGATGTTGTTGTG...GAGAGATTTTTGCCTCCAAGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS TCA 90 bp | CTGCTTCTGTGGTTAATATCTTCTGGAGAAAGCTATGGAACCGAGTaGAAAATGAACTATCCATGGGATAGCCGTTATTCCAAACACGGT | + |
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Preference number: 5 (lower is better) Translates to: LLLWLISSGESYGTE*KMNYPWDSRYSKHG Trigger: ACCGTGTTTGGAATAACGGCTATCCCATGGATAGTTCATTTTTCACTCGGTTCCATAGCTTTCTCCAGAAGATATTAACCACAGAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS-3UTR CAA 90 bp | TATAACCAACCTTGGTGGAACCTTTTATGGTCCACTTGGAGGCAAAAATCTCTCTACAGGGACACTTCATaGTCAGTAACTGCAATCAGA | + |
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Preference number: 5 (lower is better) Translates to: YNQPWWNLLWSTWRQKSLYRDTS*SVTAIR Trigger: TCTGATTGCAGTTACTGACAATGAAGTGTCCCTGTA...GAGAGATTTTTGCCTCCAAGTGGACCATAAAAGGTTCCACCAAGGTTGGTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 90 bp | GTCTTCTCTAGGTACTTATTTACTGCTTCTGTGGTTAATATCTTCTaGAGAAAGCTATGGAACCGAGTGAAAAATGAACTATCCATGGGA | + |
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Preference number: 5 (lower is better) Translates to: VFSRYLFTASVVNIF*RKLWNRVKNELSMG Trigger: TCCCATGGATAGTTCATTTTTCACTCGGTTCCATAGCTTTCTCCAGAAGATATTAACCACAGAAGCAGTAAATAAGTACCTAGAGAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 72 bp | GCTAGTGTTGGATCCGAGAGAAACAGGAGCAGGAGGTaGGGCTTCACCCCAGCCAGAGAGGCGATCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ASVGSERNRSRR*GFTPAREAISS Trigger: GGATGAGATCGCCTCTCTGGCTGGGGTGAAGCCCAACCTCCTGCTCCTGTTTCTCTCGGATCCAACACTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | CTCAGCCCTTTGAACACCCGCACAGCCCAGCGAGACTaGAGTTCTGCAATAGGTAGGATGATGCCCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: LSPLNTRTAQRD*SSAIGRMMPNG Trigger: GCCATTGGGCATCATCCTACCTATTGCAGAACTCCAGTCTCGCTGGGCTGTGCGGGTGTTCAAAGGGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | CTAGTGTTGGATCCGAGAGAAACAGGAGCAGGAGGTTaGGCTTCACCCCAGCCAGAGAGGCGATCTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: LVLDPRETGAGG*ASPQPERRSHP Trigger: TGGATGAGATCGCCTCTCTGGCTGGGGTGAAGCCCAACCTCCTGCTCCTGTTTCTCTCGGATCCAACACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS TCA 72 bp | TCATGGCCTTCACTGAGGGTAATTTGCTCAGCCCTTTaGACACCCGCACAGCCCAGCGAGACTGGAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SWPSLRVICSAL*TPAQPSETGVL Trigger: CAGAACTCCAGTCTCGCTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATTACCCTCAGTGAAGGCCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS GCA 72 bp | CCACGATCCTCGTCTGGTGCTGAGGAATACCTGTTTTaGTACACGACCAAGCTCCACGGCAATGTCCACACC | + |
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Preference number: 6 (lower is better) Translates to: PRSSSGAEEYLF*YTTKLHGNVHT Trigger: GGTGTGGACATTGCCGTGGAGCTTGGTCGTGTAGCAAAACAGGTATTCCTCAGCACCAGACGAGGATCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | GCCTTCAAACTTCTCAATGCCTGGAAAGGACTTGAGTaGCAGGTGGGGGTCTGTGTGATGGCCACTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: AFKLLNAWKGLE*QVGVCVMATAD Trigger: GTCTGCAGTGGCCATCACACAGACCCCCACCTGCCACTCAAGTCCTTTCCAGGCATTGAGAAGTTTGAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | TGGAAGGTCATCACTGATGGTGGGGTGCTGGCTCAGTaGTCTGTGCTGTGGCTGCAGACCATAATGTGCATG | + |
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Preference number: 6 (lower is better) Translates to: WKVITDGGVLAQ*SVLWLQTIMCM Trigger: CATGCACATTATGGTCTGCAGCCACAGCACAGACCACTGAGCCAGCACCCCACCATCAGTGATGACCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 72 bp | TCCATGTCTGCCTTCATGGCCTTCACTGAGGGTAATTaGCTCAGCCCTTTGAACACCCGCACAGCCCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: SMSAFMAFTEGN*LSPLNTRTAQR Trigger: TCGCTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATTACCCTCAGTGAAGGCCATGAAGGCAGACATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 90 bp | TTCCTTTGGTCCATGTCTGCCTTCATGGCCTTCACTGAGGGTAATTaGCTCAGCCCTTTGAACACCCGCACAGCCCAGCGAGACTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLWSMSAFMAFTEGN*LSPLNTRTAQRDWS Trigger: ACTCCAGTCTCGCTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATTACCCTCAGTGAAGGCCATGAAGGCAGACATGGACCAAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | AGGCTTCACCTGGACTTTTCCGGAGATGATGTGGTTTaGAAGGTCATCACTGATGGTGGGGTGCTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RLHLDFSGDDVV*KVITDGGVLAQ Trigger: CTGAGCCAGCACCCCACCATCAGTGATGACCTTCCAAACCACATCATCTCCGGAAAAGTCCAGGTGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 72 bp | TTCATGGCCTTCACTGAGGGTAATTTGCTCAGCCCTTaGAACACCCGCACAGCCCAGCGAGACTGGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FMAFTEGNLLSP*NTRTAQRDWSS Trigger: AGAACTCCAGTCTCGCTGGGCTGTGCGGGTGTTCAAAGGGCTGAGCAAATTACCCTCAGTGAAGGCCATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | ACGTTAGGCTTCACCTGGACTTTTCCGGAGATGATGTaGTTTGGAAGGTCATCACTGATGGTGGGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TLGFTWTFPEMM*FGRSSLMVGCW Trigger: CCAGCACCCCACCATCAGTGATGACCTTCCAAACCACATCATCTCCGGAAAAGTCCAGGTGAAGCCTAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 90 bp | CCCAGCCAGAGAGGCGATCTCATCCATGTACTCAATATGGTCCACTaGGATTGTGTGCCTGGCTGTCTTTACATACCGTTTCTCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: PSQRGDLIHVLNMVH*DCVPGCLYIPFLHS Trigger: GCTATGGAGAAACGGTATGTAAAGACAGCCAGGCACACAATCCAAGTGGACCATATTGAGTACATGGATGAGATCGCCTCTCTGGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CCA 72 bp | GAGGCGATCTCATCCATGTACTCAATATGGTCCACTTaGATTGTGTGCCTGGCTGTCTTTACATACCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EAISSMYSIWST*IVCLAVFTYRF Trigger: GAAACGGTATGTAAAGACAGCCAGGCACACAATCCAAGTGGACCATATTGAGTACATGGATGAGATCGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 72 bp | TCTGGAGGGAACATCAGCTTATACAGGGACACTTCATaGTCAGTAACTGCAATCAGATCCCCAAGGAATGGA | + |
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Preference number: 6 (lower is better) Translates to: SGGNISLYRDTS*SVTAIRSPRNG Trigger: TCCATTCCTTGGGGATCTGATTGCAGTTACTGACAATGAAGTGTCCCTGTATAAGCTGATGTTCCCTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 72 bp | CGATCTCATCCATGTACTCAATATGGTCCACTTGGATaGTGTGCCTGGCTGTCTTTACATACCGTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSHPCTQYGPLG*CAWLSLHTVSP Trigger: TGGAGAAACGGTATGTAAAGACAGCCAGGCACACAATCCAAGTGGACCATATTGAGTACATGGATGAGATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 72 bp | AGAGGCGATCTCATCCATGTACTCAATATGGTCCACTaGGATTGTGTGCCTGGCTGTCTTTACATACCGTTT | + |
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Preference number: 6 (lower is better) Translates to: RGDLIHVLNMVH*DCVPGCLYIPF Trigger: AAACGGTATGTAAAGACAGCCAGGCACACAATCCAAGTGGACCATATTGAGTACATGGATGAGATCGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS CAA 90 bp | TTCTCCAGGTCTGGAGGGAACATCAGCTTATACAGGGACACTTCATaGTCAGTAACTGCAATCAGATCCCCAAGGAATGGAAAAGAAATG | + |
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Preference number: 6 (lower is better) Translates to: FSRSGGNISLYRDTS*SVTAIRSPRNGKEM Trigger: CATTTCTTTTCCATTCCTTGGGGATCTGATTGCAGTTACTGACAATGAAGTGTCCCTGTATAAGCTGATGTTCCCTCCAGACCTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS TCA 72 bp | CAATGTCCACACCGGAATTCCCAATGCCAACCACTATaGTTCTCTTTCCCACATAATCCTCAGGACTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QCPHRNSQCQPL*FSFPHNPQDFC Trigger: ACAAAAGTCCTGAGGATTATGTGGGAAAGAGAATCATAGTGGTTGGCATTGGGAATTCCGGTGTGGACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS TCA 72 bp | TATCTTCTGGAGAAAGCTATGGAACCGAGTGAAAAATaGACTATCCATGGGATAGCCGTTATTCCAAACACG | + |
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Preference number: 6 (lower is better) Translates to: YLLEKAMEPSEK*TIHGIAVIPNT Trigger: CGTGTTTGGAATAACGGCTATCCCATGGATAGTTCATTTTTCACTCGGTTCCATAGCTTTCTCCAGAAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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| CDS TCA 72 bp | TGGTTAATATCTTCTGGAGAAAGCTATGGAACCGAGTaGAAAATGAACTATCCATGGGATAGCCGTTATTCC | + |
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Preference number: 6 (lower is better) Translates to: WLISSGESYGTE*KMNYPWDSRYS Trigger: GGAATAACGGCTATCCCATGGATAGTTCATTTTTCACTCGGTTCCATAGCTTTCTCCAGAAGATATTAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027843.11 ENSMUST00000148677.2 |
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