Pregenerated sensors for FMO6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095576Ensembl transcript IDs: ENSMUST00000178465.3, ENSMUST00000195576.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGAAGGCTCCTGGGCCCTTGTAATCCCGGCTGTGTAGGCACTTaGCTCGAAAGTGCTCTAGACCGGGAAAAGAGTCAGTTGGCATGT | + |
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Preference number: 1 (lower is better) Translates to: PGRLLGPCNPGCVGT*LESALDREKSQLAC Trigger: ACATGCCAACTGACTCTTTTCCCGGTCTAGAGCACTTTCGAGGCAAGTGCCTACACAGCCGGGATTACAAGGGCCCAGGAGCCTTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CCA 90 bp | CATAAAGGTGACGTGGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTaGTTGGCTTCACCGTCCGTTTCCATTGAGTTAGGATGGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: HKGDVVFVLRRQPLS*LASPSVSIELGWHF Trigger: GAAATGCCATCCTAACTCAATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACCACGTCACCTTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CCA 90 bp | GATCCAGGTTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTaGTCATTATGTGTGCATACTTGTGTTTGTGTATTATACTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: DPGCISHLLEGEEGP*SLCVHTCVCVLYSS Trigger: ACTGGAGTATAATACACAAACACAAGTATGCACACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAACCTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR GCA 90 bp | GGGTATTTTCCATTTTATTTATCCTTTGAGTCAAATGATCCAGGTTaGATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTA | + |
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Preference number: 1 (lower is better) Translates to: GYFPFYLSFESNDPG*ISHLLEGEEGPWSL Trigger: TAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAACCTGGATCATTTGACTCAAAGGATAAATAAAATGGAAAATACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCTGGTCACGATGGGCTTaGTGGTCACCATGCCACACA | + |
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Preference number: 2 (lower is better) Translates to: GLCASPTALVLVGFTVRFWSRWA*WSPCHT Trigger: TGTGTGGCATGGTGACCATCAAGCCCATCGTGACCA...GAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCCCAGGCCAATCACAAGGACTTTCTTTCCCTGGAAGGCTCCTGGGCCCTGGCTGTGTAGGCACTTaGCTCGAAAGTGCTCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: SFPGQSQGLSFPGRLLGPGCVGT*LESALD Trigger: GTCTAGAGCACTTTCGAGGCAAGTGCCTACACAGCC...AGGGCCCAGGAGCCTTCCAGGGAAAGAAAGTCCTTGTGATTGGCCTGGGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAAACACTTTAGCAGCCCAGCGTGCCTGGAGGTCAGCTGTAGGAATGGCCCATGCCACACAGGATaGGGGATGGGAGCTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: VCKHFSSPACLEVSCRNGPCHTG*GMGAHH Trigger: ATGATGAGCTCCCATCCCGCATCCTGTGTGGCATGG...GCCATTCCTACAGCTGACCTCCAGGCACGCTGGGCTGCTAAAGTGTTTACAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCCATAGTCAGTTGGCATGTTaGGGTACACGTGATGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LCASPTALVLVGFTVRFHSQLAC*GTRDVL Trigger: CAGGACATCACGTGTACCCCAACATGCCAACTGACT...ATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTGGGAAAAGAGTCAGTTaGCATGTTGGGGTACACGTG | + |
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Preference number: 2 (lower is better) Translates to: WSLCFADSPCPGWLHRPFGKRVS*HVGVHV Trigger: CACGTGTACCCCAACATGCCAACTGACTCTTTTCCC...AAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CAA 90 bp | GCAAGTCATAAAGGTGACGTGGTCTTTGTGCTTCGCCGACAGCCCTaGTCCTGGTTGGCTTCACCGTCCGTTTCCATTGAGTTAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: ASHKGDVVFVLRRQP*SWLASPSVSIELGW Trigger: CCATCCTAACTCAATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACCACGTCACCTTTATGACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCCATGTTGGTTTCTCTAGTTaGGGAGGGAAGATGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LCASPTALVLVGFTVRFHVGFSS*GGKMPL Trigger: CAAAGGCATCTTCCCTCCTCAACTAGAGAAACCAAC...ATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CAA 90 bp | GTAGGCACTTGCCTCGAAAGTGCTCTAGACCGGGAAAAGAGTCAGTaGGCATGTTGGGGTACACGTGATGTCCTGAACAGATCATCACAG | + |
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Preference number: 2 (lower is better) Translates to: VGTCLESALDREKSQ*ACWGTRDVLNRSSQ Trigger: CTGTGATGATCTGTTCAGGACATCACGTGTACCCCAACATGCCAACTGACTCTTTTCCCGGTCTAGAGCACTTTCGAGGCAAGTGCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR GCA 90 bp | TTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTATGTGTGCAGTGACGTGGTCTTTGTaGTTCGCCGACAGCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LHFTSARRRGGPLVIMCAVTWSL*FADSPC Trigger: ACAAGGGCTGTCGGCGAAGCACAAAGACCACGTCAC...TGCACACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTAAACACTTTAGCAGCCCAGCGTGCCTGGAGGTCAGCTGTAGGAATGGCGGCCAATCACTGCCATaGTTGGTTTCTCTAGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: VCKHFSSPACLEVSCRNGGQSLP*LVSLVE Trigger: CTCAACTAGAGAAACCAACCATGGCAGTGATTGGCC...GCCATTCCTACAGCTGACCTCCAGGCACGCTGGGCTGCTAAAGTGTTTACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTATACTCCAGTGATTTCACTTCTAGGCTGGACTCTGGCACCCAGCAGATCCAAACTCGACTCATaGTCCAGGAACCGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: VYYTPVISLLGWTLAPSRSKLDS*SRNRFW Trigger: CCAGAAGCGGTTCCTGGATCATGAGTCGAGTTTGGA...TCTGCTGGGTGCCAGAGTCCAGCCTAGAAGTGAAATCACTGGAGTATAATACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTATACTCCAGTGATTTCACTTCTAGGCTGGACTCTGGCACCCAGCAGAAGCCTGTGGCGAAGATaGCACAGTCAATGGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: VYYTPVISLLGWTLAPSRSLWRR*HSQWPQ Trigger: TTGAGGCCATTGACTGTGTCATCTTCGCCACAGGCT...TCTGCTGGGTGCCAGAGTCCAGCCTAGAAGTGAAATCACTGGAGTATAATACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTATGTTGCAGAGTGTGGCTCTaGCCAAACCACTTGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PGCISHLLEGEEGPWSLCCRVWL*PNHLSF Trigger: GAAACTCAAGTGGTTTGGCCAGAGCCACACTCTGCA...ACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTATGTGTGCAACACAGGATGCGGGATaGGAGCTCATCATTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: LHFTSARRRGGPLVIMCATQDAG*ELIIEH Trigger: GTGTTCAATGATGAGCTCCCATCCCGCATCCTGTGT...TGCACACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTATGTGTGCAATGTTGGGGTACACGTaGTGTCCTGAACAGATCATC | + |
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Preference number: 2 (lower is better) Translates to: LHFTSARRRGGPLVIMCAMLGYT*CPEQII Trigger: GATGATCTGTTCAGGACATCACGTGTACCCCAACAT...TGCACACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTTATTTATCCTTTGAGTCAAATGATCCAGGTTGCATTTCACATCTGCACTTCCAGGGCCAGCTaGGGGTCAGTCAAGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FHFIYPLSQMIQVAFHICTSRAS*GSVKKS Trigger: GCTCTTCTTGACTGACCCCCAGCTGGCCCTGGAAGT...GCAGATGTGAAATGCAACCTGGATCATTTGACTCAAAGGATAAATAAAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR TCA 90 bp | TTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTATGTGTGCATGCCTTTGTACAAAGTaGCCTCATTATTTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LHFTSARRRGGPLVIMCACLCTK*PHYFCF Trigger: AAAGCAGAAATAATGAGGTCACTTTGTACAAAGGCA...TGCACACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTTATTTATCCTTTGAGTCAAATGATCCAGGTTGCATTTCACATCTGCTCCGTCCCACTTTCCTaGTCCCATCAATCGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: FHFIYPLSQMIQVAFHICSVPLS*SHQSKL Trigger: CAGTTTCGATTGATGGGACCAGGAAAGTGGGACGGA...GCAGATGTGAAATGCAACCTGGATCATTTGACTCAAAGGATAAATAAAATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR GCA 72 bp | CTCCTGGGCCCTTGTAATCCCGGCTGTGTAGGCACTTaGCTCGAAAGTGCTCTAGACCGGGAAAAGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LLGPCNPGCVGT*LESALDREKSQ Trigger: CTGACTCTTTTCCCGGTCTAGAGCACTTTCGAGGCAAGTGCCTACACAGCCGGGATTACAAGGGCCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CCA 72 bp | GACGTGGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTaGTTGGCTTCACCGTCCGTTTCCATTGAGTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: DVVFVLRRQPLS*LASPSVSIELG Trigger: TCCTAACTCAATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACCACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CAA 90 bp | GGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCAACCACTTGAGTTTCTaGCCCATTTTCTCATCAATG | + |
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Preference number: 3 (lower is better) Translates to: GLCASPTALVLVGFTVRFNHLSF*PIFSSM Trigger: CATTGATGAGAAAATGGGCAAGAAACTCAAGTGGTT...GAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CAA 90 bp | AGTTTCCCAGGCCAATCACAAGGACTTTCTTTCCCTGGAAGGCTCCTGGGCCCTAAAGAGCACAGATTCTaGCTTGCCTTCCTTTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SFPGQSQGLSFPGRLLGPKEHRF*LAFLFS Trigger: ACTGAAAAGGAAGGCAAGCAAGAATCTGTGCTCTTT...AGGGCCCAGGAGCCTTCCAGGGAAAGAAAGTCCTTGTGATTGGCCTGGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CCA 72 bp | AGTGCTCTAGACCGGGAAAAGAGTCAGTTGGCATGTTaGGGTACACGTGATGTCCTGAACAGATCATCACAG | + |
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Preference number: 3 (lower is better) Translates to: SALDREKSQLAC*GTRDVLNRSSQ Trigger: CTGTGATGATCTGTTCAGGACATCACGTGTACCCCAACATGCCAACTGACTCTTTTCCCGGTCTAGAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CAA 90 bp | CGGAGGAAGGATGTGAATCGGGTAACATATACCATATCCCAAGGATACCCATCACGGGAAAAGAGTCAGTaGGCATGTTGGGGTACACGT | + |
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Preference number: 3 (lower is better) Translates to: RRKDVNRVTYTISQGYPSREKSQ*ACWGTR Trigger: ACGTGTACCCCAACATGCCAACTGACTCTTTTCCCG...TGATGGGTATCCTTGGGATATGGTATATGTTACCCGATTCACATCCTTCCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CAA 90 bp | GAAAAGAGTCAGTTGGCATGTTGGGGTACACGTGATGTCCTGAACAGATCATCAAGCACAGATTCTTGCTaGCCTTCCTTTTCAGTAACA | + |
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Preference number: 3 (lower is better) Translates to: EKSQLACWGTRDVLNRSSSTDSC*PSFSVT Trigger: TGTTACTGAAAAGGAAGGCAAGCAAGAATCTGTGCT...TGATGATCTGTTCAGGACATCACGTGTACCCCAACATGCCAACTGACTCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCATTTCACATCTGCTAGAAGGAGAGGAGGGCCCTTGGTCATTATGTGTGCATCATTATTTCTGCTTTaGATGATGGAGTCATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LHFTSARRRGGPLVIMCASLFLL*MMESSR Trigger: CCTGGATGACTCCATCATCAAAAGCAGAAATAATGA...TGCACACATAATGACCAAGGGCCCTCCTCTCCTTCTAGCAGATGTGAAATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR-3UTR CAA 90 bp | TTCCATTTTATTTATCCTTTGAGTCAAATGATCCAGGTTGCATTTCACATCTGCCTCTGGCCAAACCACTaGAGTTTCTTGCCCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: FHFIYPLSQMIQVAFHICLWPNH*SFLPIF Trigger: GAAAATGGGCAAGAAACTCAAGTGGTTTGGCCAGAG...GCAGATGTGAAATGCAACCTGGATCATTTGACTCAAAGGATAAATAAAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS-3UTR GCA 90 bp | GGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCGGCCCTTCCTTCCTCTaGGTGGCTCGAGAATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GLCASPTALVLVGFTVRFGPSFL*VAREFP Trigger: TGGAAATTCTCGAGCCACGCAGAGGAAGGAAGGGCC...GAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CAA 72 bp | GTGGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTaGGCTTCACCGTCCGTTTCCATTGAGTTAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VVFVLRRQPLSW*ASPSVSIELGW Trigger: CCATCCTAACTCAATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS-3UTR GCA 90 bp | AAAGTACACTTCCAGGGCCAGCTGGGGGTCAGTCAAGAAGAGCCAGGGTATGTTGCCCTCCAACATCGATaGTCCTTTCAAAGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: KVHFQGQLGVSQEEPGYVALQHR*SFQSRW Trigger: CCATCTGCTTTGAAAGGAGCATCGATGTTGGAGGGC...AACATACCCTGGCTCTTCTTGACTGACCCCCAGCTGGCCCTGGAAGTGTACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS-3UTR GCA 90 bp | CTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCCATTGTATTCCTGGAGTTTaGTGTGGTGCATGTAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: LCASPTALVLVGFTVRFHCIPGV*CGACSS Trigger: CGAACTACATGCACCACAGCAAACTCCAGGAATACA...ATGGAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| 3UTR CAA 72 bp | TGCCTCGAAAGTGCTCTAGACCGGGAAAAGAGTCAGTaGGCATGTTGGGGTACACGTGATGTCCTGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: CLESALDREKSQ*ACWGTRDVLNR Trigger: TCTGTTCAGGACATCACGTGTACCCCAACATGCCAACTGACTCTTTTCCCGGTCTAGAGCACTTTCGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS-3UTR CCA 90 bp | GAAAAGAGTCAGTTGGCATGTTGGGGTACACGTGATGTCCTGAACAGATCATCAGACGTGATGTATTCCTaGAGTTTGCTGTGGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: EKSQLACWGTRDVLNRSSDVMYS*SLLWCM Trigger: CATGCACCACAGCAAACTCCAGGAATACATCACGTC...TGATGATCTGTTCAGGACATCACGTGTACCCCAACATGCCAACTGACTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS-3UTR CCA 90 bp | ATATTCCGGAGGAAGGATGTGAATCGGGTAACATATACCATATCCCAAGGATACCTTCCTTCCTCTGCGTaGCTCGAGAATTTCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: IFRRKDVNRVTYTISQGYLPSSA*LENFHS Trigger: GCTATGGAAATTCTCGAGCCACGCAGAGGAAGGAAG...GTATCCTTGGGATATGGTATATGTTACCCGATTCACATCCTTCCTCCGGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS-3UTR CAA 90 bp | GGTCTTTGTGCTTCGCCGACAGCCCTTGTCCTGGTTGGCTTCACCGTCCGTTTCTTCTTCCTTTCTGTCTaGCAGTATTTTCCTCAAACT | + |
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Preference number: 5 (lower is better) Translates to: GLCASPTALVLVGFTVRFFFLSV*QYFPQT Trigger: AGTTTGAGGAAAATACTGCAAGACAGAAAGGAAGAA...GAAACGGACGGTGAAGCCAACCAGGACAAGGGCTGTCGGCGAAGCACAAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS TCA 90 bp | GAAACCAGGGTCTCAAACTGTATGTATCTCAGAAGACCCTTCTTCTaGGCGAACGACGTGATGTATTCCTGGAGTTTGCTGTGGTGCATG | + |
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Preference number: 5 (lower is better) Translates to: ETRVSNCMYLRRPFF*ANDVMYSWSLLWCM Trigger: CATGCACCACAGCAAACTCCAGGAATACATCACGTCGTTCGCTCAGAAGAAGGGTCTTCTGAGATACATACAGTTTGAGACCCTGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178465.3 |
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| CDS TCA 72 bp | TGTATCTCAGAAGACCCTTCTTCTGAGCGAACGACGTaGTGTATTCCTGGAGTTTGCTGTGGTGCATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: CISEDPSSERTT*CIPGVCCGACS Trigger: ACTACATGCACCACAGCAAACTCCAGGAATACATCACGTCGTTCGCTCAGAAGAAGGGTCTTCTGAGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178465.3 ENSMUST00000195576.5 |
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| CDS TCA 72 bp | GTCTCAAACTGTATGTATCTCAGAAGACCCTTCTTCTaGGCGAACGACGTGATGTATTCCTGGAGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSNCMYLRRPFF*ANDVMYSWSLL Trigger: CAGCAAACTCCAGGAATACATCACGTCGTTCGCTCAGAAGAAGGGTCTTCTGAGATACATACAGTTTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178465.3 |
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| CDS TCA 72 bp | TCCTCAAACTGTATGTATCTCAGAAGACCCTTCTTCTaGGCGAACGACGTGATGTATTCCTGGAGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSNCMYLRRPFF*ANDVMYSWSLL Trigger: CAGCAAACTCCAGGAATACATCACGTCGTTCGCTCAGAAGAAGGGTCTTCTGAGATACATACAGTTTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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| CDS CAA 72 bp | GAATTCCTTCTATTTGTGGAATTCTTCCTTTCTGTCTaGCAGTATTTTCCTCAAACTGTATGTATCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: EFLLFVEFFLSV*QYFPQTVCISE Trigger: TTCTGAGATACATACAGTTTGAGGAAAATACTGCAAGACAGAAAGGAAGAATTCCACAAATAGAAGGAATTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195576.5 |
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