Pregenerated sensors for FMO4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026692Ensembl transcript IDs: ENSMUST00000028014.10, ENSMUST00000111525.8, ENSMUST00000140274.2, ENSMUST00000144916.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTAATTGCCTAGATAGGTTGGCCTATGGGCATGCCAGTGAGGCATaGACTTGGAAGACACTATGGGAAGAGAGTAGGCATGCCCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: GNCLDRLAYGHASEA*TWKTLWEESRHAQD Trigger: ATCTTGGGCATGCCTACTCTCTTCCCATAGTGTCTTCCAAGTTCATGCCTCACTGGCATGCCCATAGGCCAACCTATCTAGGCAATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR CCA 90 bp | AAGGCTCCATCATTTATTATAAGATACAAAACATCAAGTGACAGCTaGGTTTGGTGGCACATATTTTTACATTACAGCAGTCAGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KAPSFIIRYKTSSDS*VWWHIFLHYSSQAE Trigger: CTCTGCCTGACTGCTGTAATGTAAAAATATGTGCCACCAAACCCAGCTGTCACTTGATGTTTTGTATCTTATAATAAATGATGGAGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR CCA 90 bp | TCATTTATTATAAGATACAAAACATCAAGTGACAGCTGGGTTTGGTaGCACATATTTTTACATTACAGCAGTCAGGCAGAGGTGAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: SFIIRYKTSSDSWVW*HIFLHYSSQAEVRR Trigger: TCTTCTCACCTCTGCCTGACTGCTGTAATGTAAAAATATGTGCCACCAAACCCAGCTGTCACTTGATGTTTTGTATCTTATAATAAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATGCCAGTGAGGCATGAACTTGGAAGACACTATGGGAAGAGAGTAGGCATGGATCAGAGGCAGCCTTaGTTTATGACAACCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GMPVRHELGRHYGKRVGMDQRQP*FMTTCP Trigger: AGGGCAGGTTGTCATAAAGCAAGGCTGCCTCTGATC...CATGCCTACTCTCTTCCCATAGTGTCTTCCAAGTTCATGCCTCACTGGCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCACATATTTTTACATTACAGCAGTCAGGCAGAGGTGAGAAGATCTCCTTATATGGTTCTGGAGGCTaGAGGGCTCAAGGATACAGT | + |
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Preference number: 2 (lower is better) Translates to: VAHIFTLQQSGRGEKISLYGSGG*RAQGYS Trigger: ACTGTATCCTTGAGCCCTCCAGCCTCCAGAACCATA...TAAGGAGATCTTCTCACCTCTGCCTGACTGCTGTAATGTAAAAATATGTGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCACATATTTTTACATTACAGCAGTCAGGCAGAGGTGAGAAGATCTCCTTATTCTCAGCGGGTAATTaGCTAGATAGGTTGGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: VAHIFTLQQSGRGEKISLFSAGN*LDRLAY Trigger: ATAGGCCAACCTATCTAGGCAATTACCCGCTGAGAA...TAAGGAGATCTTCTCACCTCTGCCTGACTGCTGTAATGTAAAAATATGTGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAGCAATCAGTAATGAGGCATCTCAGATCATTTCCCATCATCACAATAGAAGAGTGATCCAGTGTTaGGAGCAGCACCAATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: SLAISNEASQIISHHHNRRVIQC*EQHQSV Trigger: AACAGATTGGTGCTGCTCTCAACACTGGATCACTCT...TCTATTGTGATGATGGGAAATGATCTGAGATGCCTCATTACTGATTGCTAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAGCAATCAGTAATGAGGCATCTCAGATCATTTCCCATCATCACAATAGAGGTAAATTTTGTTTATaGTTCTGGAGGCTGGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SLAISNEASQIISHHHNRGKFCL*FWRLEG Trigger: GCCCTCCAGCCTCCAGAACCATAAACAAAATTTACC...TCTATTGTGATGATGGGAAATGATCTGAGATGCCTCATTACTGATTGCTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR TCA 72 bp | CTAGATAGGTTGGCCTATGGGCATGCCAGTGAGGCATaGACTTGGAAGACACTATGGGAAGAGAGTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: LDRLAYGHASEA*TWKTLWEESRH Trigger: ATGCCTACTCTCTTCCCATAGTGTCTTCCAAGTTCATGCCTCACTGGCATGCCCATAGGCCAACCTATCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR TCA 72 bp | TTATGGTTCTGGAGGCTGGAGGGCTCAAGGATACAGTaGCAGCTTCTAGTGAGAGGTTTGTTCTATGTCATT | + |
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Preference number: 3 (lower is better) Translates to: LWFWRLEGSRIQ*QLLVRGLFYVI Trigger: AATGACATAGAACAAACCTCTCACTAGAAGCTGTCACTGTATCCTTGAGCCCTCCAGCCTCCAGAACCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR TCA 72 bp | GGCACATATTTTTACATTACAGCAGTCAGGCAGAGGTaGGAAGATCTCCTTAAGAGTTCAAGGCCAGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: GTYFYITAVRQR*EDLLKSSRPAK Trigger: TTTGGCTGGCCTTGAACTCTTAAGGAGATCTTCTCACCTCTGCCTGACTGCTGTAATGTAAAAATATGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR-3UTR CAA 90 bp | GTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAAAGTTCAGAGAGTGATCCAGTGTaGAGAGCAGCACCAATCTGT | + |
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Preference number: 3 (lower is better) Translates to: VTASSERFVLCHYMVESSESDPV*RAAPIC Trigger: ACAGATTGGTGCTGCTCTCAACACTGGATCACTCTC...TGAACTTTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR TCA 72 bp | CTCCTTAAGAGTTCAAGGCCAGCCAAAGCCATATACTaGGACCTCATCTTAAACCAAAACCAAAATACTCCT | + |
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Preference number: 3 (lower is better) Translates to: LLKSSRPAKAIY*DLILNQNQNTP Trigger: AGGAGTATTTTGGTTTTGGTTTAAGATGAGGTCTCAGTATATGGCTTTGGCTGGCCTTGAACTCTTAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| 3UTR CCA 72 bp | ATTATAAGATACAAAACATCAAGTGACAGCTGGGTTTaGTGGCACATATTTTTACATTACAGCAGTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: IIRYKTSSDSWV*WHIFLHYSSQA Trigger: TGCCTGACTGCTGTAATGTAAAAATATGTGCCACCAAACCCAGCTGTCACTTGATGTTTTGTATCTTATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCTGGAGGGCTCAAGGATACAGTGACAGCTTCTAGTGAGAGGTTTGTTGTGACCTGTAAACCCTaGTCATCCCATCCTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LEAGGLKDTVTASSERFVVTCKP*SSHPRK Trigger: CTTCCGAGGATGGGATGACCAGGGTTTACAGGTCAC...AACAAACCTCTCACTAGAAGCTGTCACTGTATCCTTGAGCCCTCCAGCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | TTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTTGCCTTCTGTCTCTGTaGCAACATCCCACTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRAAPICLKRVSQTPSSICLLSL*QHPTGQ Trigger: CTGGCCAGTGGGATGTTGTCACAGAGACAGAAGGCA...AATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCGTGCTGAGAAACACCTaGGCTGCTATTTCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: VLRAAPICLKRVSQTPSSVLRNT*AAISLS Trigger: GCTCAGTGAAATAGCAGCTCAGGTGTTTCTCAGCAC...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCTCGGCCATCAGTTTCTaGGATGGAGGTATGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLRAAPICLKRVSQTPSSSAISF*DGGMLQ Trigger: CTGTAGCATACCTCCATCTCAGAAACTGATGGCCGA...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | GGCATGCCAGTGAGGCATGAACTTGGAAGACACTATGGGAAGAGAGTAGGCATGTCGGCCATCAGTTTCTaGGATGGAGGTATGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: GMPVRHELGRHYGKRVGMSAISF*DGGMLQ Trigger: CTGTAGCATACCTCCATCTCAGAAACTGATGGCCGA...CATGCCTACTCTCTTCCCATAGTGTCTTCCAAGTTCATGCCTCACTGGCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCGGAATCCTGTACTCTTaGCTGTGCAGGATCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRAAPICLKRVSQTPSSGILYS*LCRICP Trigger: AGGACAGATCCTGCACAGCCAAGAGTACAGGATTCC...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACGCCCCGGAAGGCATCTaGAATCCTGTACTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CLKRVSQTPSSIGKLETNAPEGI*NPVLLA Trigger: AGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGC...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCGTGGCCCATCGTGCTTaGAACTCTGTGCCCACTAAG | + |
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Preference number: 4 (lower is better) Translates to: ICLKRVSQTPSSIGKLETVAHRA*NSVPTK Trigger: CTTAGTGGGCACAGAGTTCCAAGCACGATGGGCCAC...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCTGGAGGGCTCAAGGATACAGTGACAGCTTCTAGTGAGAGGTTTGTTTGCTACAGAGTCCTTTaGATACTCTTGTGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LEAGGLKDTVTASSERFVCYRVL*ILLWPI Trigger: GATGGGCCACAAGAGTATTCAAAGGACTCTGTAGCA...AACAAACCTCTCACTAGAAGCTGTCACTGTATCCTTGAGCCCTCCAGCCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR GCA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCCTCAGCAGGCCAAAGTaGTCAGCAAATTCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VLRAAPICLKRVSQTPSSLSRPK*SANSLR Trigger: TCTCAGAGAATTTGCTGAGCACTTTGGCCTGCTGAG...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACGTGACCTGTAAACCCTaGTCATCCCATCCTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLKRVSQTPSSIGKLETNVTCKP*SSHPRK Trigger: CTTCCGAGGATGGGATGACCAGGGTTTACAGGTCAC...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | GTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATGGAATCCTGTACTCTTaGCTGTGCAGGATCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VESSTNLFKEGVPDTFLHGILYS*LCRICP Trigger: AGGACAGATCCTGCACAGCCAAGAGTACAGGATTCC...ATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | TTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGAGCTGCTATTTCACTaGGCTCTACTGCTATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LRAAPICLKRVSQTPSSIELLFH*ALLLCP Trigger: GGGACATAGCAGTAGAGCTCAGTGAAATAGCAGCTC...AATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR GCA 90 bp | GTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGTGGGCTCAGGAATTaGCCAGTGCAAACCATAACA | + |
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Preference number: 4 (lower is better) Translates to: VESSTNLFKEGVPDTFLHCGLRN*PVQTIT Trigger: TGTTATGGTTTGCACTGGGCAATTCCTGAGCCCACA...ATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCTGGAGGGCTCAAGGATACAGTGACAGCTTCTAGTGAGAGGTTTGTTTGCTCTCTCCAAATTTaGGGGAAAGACTCGCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LEAGGLKDTVTASSERFVCSLQI*GKDSLV Trigger: TACAAGCGAGTCTTTCCCCCAAATTTGGAGAGAGCA...AACAAACCTCTCACTAGAAGCTGTCACTGTATCCTTGAGCCCTCCAGCCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCCATCAGTTTCTGAGATaGAGGTATGCTACAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLRAAPICLKRVSQTPSSHQFLR*RYATES Trigger: GGACTCTGTAGCATACCTCCATCTCAGAAACTGATG...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | GTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATCTTAATGAACAAAAGTaGAATGCTGGGCTTCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VESSTNLFKEGVPDTFLHLNEQK*NAGLRA Trigger: GGCGCGAAGCCCAGCATTCCACTTTTGTTCATTAAG...ATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCTTGTTTGTATCATATTaGAAGGGTAGCCACCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VLRAAPICLKRVSQTPSSLFVSY*KGSHQV Trigger: CACCTGGTGGCTACCCTTTCAATATGATACAAACAA...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCTGCTACAGAGTCCTTTaGATACTCTTGTGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: ICLKRVSQTPSSIGKLETCYRVL*ILLWPI Trigger: GATGGGCCACAAGAGTATTCAAAGGACTCTGTAGCA...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR GCA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCCTCAGCAGGCCAAAGTaGTCAGCAAATTCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ICLKRVSQTPSSIGKLETLSRPK*SANSLR Trigger: TCTCAGAGAATTTGCTGAGCACTTTGGCCTGCTGAG...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCGTGACAACATCCCACTaGCCAGTTTCAGAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ICLKRVSQTPSSIGKLETVTTSH*PVSEKS Trigger: AGACTTCTCTGAAACTGGCCAGTGGGATGTTGTCAC...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | GTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGCTCTCTCCAAATTTaGGGGAAAGACTCGCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VESSTNLFKEGVPDTFLHCSLQI*GKDSLV Trigger: TACAAGCGAGTCTTTCCCCCAAATTTGGAGAGAGCA...ATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACCTTAATGAACAAAAGTaGAATGCTGGGCTTCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: CLKRVSQTPSSIGKLETNLNEQK*NAGLRA Trigger: GGCGCGAAGCCCAGCATTCCACTTTTGTTCATTAAG...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | GTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTTGTTTGTATCATATTaGAAGGGTAGCCACCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VESSTNLFKEGVPDTFLHLFVSY*KGSHQV Trigger: CACCTGGTGGCTACCCTTTCAATATGATACAAACAA...ATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | AATGAAATGGGTAAATTTTGTTTATGGTTCTGGAGGCTGGAGGGCTCAAGGATAGCCCCGGAAGGCATCTaGAATCCTGTACTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NEMGKFCLWFWRLEGSRIAPEGI*NPVLLA Trigger: AGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGC...TATCCTTGAGCCCTCCAGCCTCCAGAACCATAAACAAAATTTACCCATTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR CCA 90 bp | TTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTCATCAGTTTCTGAGATaGAGGTATGCTACAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LRAAPICLKRVSQTPSSIHQFLR*RYATES Trigger: GGACTCTGTAGCATACCTCCATCTCAGAAACTGATG...AATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| 3UTR CAA 72 bp | TTTATGACAACCTGCCCTACTGAGAGTGATCCAGTGTaGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FMTTCPTESDPV*RAAPICLKRVS Trigger: GGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACACTGGATCACTCTCAGTAGGGCAGGTTGTCATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | GTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAAAGTTCATGCCTTCTGTCTCTGTaGCAACATCCCACTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VTASSERFVLCHYMVESSCLLSL*QHPTGQ Trigger: CTGGCCAGTGGGATGTTGTCACAGAGACAGAAGGCA...TGAACTTTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCTGGAGGGCTCAAGGATACAGTGACAGCTTCTAGTGAGAGGTTTGTTTTCATTTTCCTCTCGTaGGTCCAGTTTATAAAACGT | + |
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Preference number: 4 (lower is better) Translates to: LEAGGLKDTVTASSERFVFIFLS*VQFIKR Trigger: ACGTTTTATAAACTGGACTCACGAGAGGAAAATGAA...AACAAACCTCTCACTAGAAGCTGTCACTGTATCCTTGAGCCCTCCAGCCTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCCTCGCTTGTATAGGATaGTCTTCTTTGTACAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: ICLKRVSQTPSSIGKLETLACIG*SSLYKG Trigger: GCCTTTGTACAAAGAAGATCATCCTATACAAGCGAG...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS-3UTR TCA 90 bp | AATGAAATGGGTAAATTTTGTTTATGGTTCTGGAGGCTGGAGGGCTCAAGGATAGAGCTGCTATTTCACTaGGCTCTACTGCTATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: NEMGKFCLWFWRLEGSRIELLFH*ALLLCP Trigger: GGGACATAGCAGTAGAGCTCAGTGAAATAGCAGCTC...TATCCTTGAGCCCTCCAGCCTCCAGAACCATAAACAAAATTTACCCATTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
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| CDS-3UTR GCA 90 bp | GGCATGCCAGTGAGGCATGAACTTGGAAGACACTATGGGAAGAGAGTAGGCATGAACATGACATTTCTTTaGAGACATTTGTCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GMPVRHELGRHYGKRVGMNMTFL*RHLSLV Trigger: CACTAGTGACAAATGTCTGCAAAGAAATGTCATGTT...CATGCCTACTCTCTTCCCATAGTGTCTTCCAAGTTCATGCCTCACTGGCATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTTGTCCTTTAAACTTATaGATTCCAGGAAAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRAAPICLKRVSQTPSSICPLNL*IPGKDS Trigger: GGAGTCCTTTCCTGGAATCCATAAGTTTAAAGGACA...AATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTAGCAATCAGTAATGAGGCATCTCAGATCATTTCCCATCATCACAATAGAGTGGCCCATCGTGCTTaGAACTCTGTGCCCACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLAISNEASQIISHHHNRVAHRA*NSVPTK Trigger: CTTAGTGGGCACAGAGTTCCAAGCACGATGGGCCAC...TCTATTGTGATGATGGGAAATGATCTGAGATGCCTCATTACTGATTGCTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACTTCATTTTCCTCTCGTaGGTCCAGTTTATAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: CLKRVSQTPSSIGKLETNFIFLS*VQFIKR Trigger: ACGTTTTATAAACTGGACTCACGAGAGGAAAATGAA...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACTCACTACATCAATGTTaGCTTCTGTTGTACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLKRVSQTPSSIGKLETNSLHQC*LLLYHL Trigger: AAGATGGTACAACAGAAGCCAACATTGATGTAGTGA...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAAGTCCAGTTTGTCTTaGCTGGTATCTTTAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: ICLKRVSQTPSSIGKLETKSSLS*LVSLIT Trigger: TGTGATTAAAGATACCAGCCAAGACAAACTGGACTT...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACTTCCCAAGCCAATCTTaGATCCTTAATGAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLKRVSQTPSSIGKLETNFPSQS*ILNEQK Trigger: CTTTTGTTCATTAAGGATCCAAGATTGGCTTGGGAA...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTAACATGACATTTCTTTaGAGACATTTGTCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRAAPICLKRVSQTPSSINMTFL*RHLSLV Trigger: CACTAGTGACAAATGTCTGCAAAGAAATGTCATGTT...AATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | GATACAGTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAAGTGACAACATCCCACTaGCCAGTTTCAGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTVTASSERFVLCHYMVEVTTSH*PVSEKS Trigger: AGACTTCTCTGAAACTGGCCAGTGGGATGTTGTCAC...TTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCACTGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR TCA 90 bp | GATACAGTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAACTCGCTTGTATAGGATaGTCTTCTTTGTACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTVTASSERFVLCHYMVELACIG*SSLYKG Trigger: GCCTTTGTACAAAGAAGATCATCCTATACAAGCGAG...TTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCACTGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCACATATTTTTACATTACAGCAGTCAGGCAGAGGTGAGAAGATCTCCTTATCACTACATCAATGTTaGCTTCTGTTGTACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAHIFTLQQSGRGEKISLSLHQC*LLLYHL Trigger: AAGATGGTACAACAGAAGCCAACATTGATGTAGTGA...TAAGGAGATCTTCTCACCTCTGCCTGACTGCTGTAATGTAAAAATATGTGCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR CCA 90 bp | GTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAAAGTTCATTCCCAAGCCAATCTTaGATCCTTAATGAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTASSERFVLCHYMVESSFPSQS*ILNEQK Trigger: CTTTTGTTCATTAAGGATCCAAGATTGGCTTGGGAA...TGAACTTTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS CCA 90 bp | GTTTCCAAGACCAACCACCAGGATGCGCTTGCCCCGGAAGGCATCTaGAATCCTGTACTCTTGGCTGTGCAGGATCTGTCCTTTAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VSKTNHQDALAPEGI*NPVLLAVQDLSFKL Trigger: AAGTTTAAAGGACAGATCCTGCACAGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGTGGTTGGTCTTGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCTCGTCCAAGCAGCACTaGATAGAGGACAGGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VLRAAPICLKRVSQTPSSSSKQH*IEDRPL Trigger: AAGTGGCCTGTCCTCTATCAAGTGCTGCTTGGACGA...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS GCA 90 bp | ATGCGCTTGCCCCGGAAGGCATCTGGAATCCTGTACTCTTGGCTGTaGAGGATCTGTCCTTTAAACTTATGGATTCCAGGAAAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: MRLPRKASGILYSWL*RICPLNLWIPGKDS Trigger: GGAGTCCTTTCCTGGAATCCATAAGTTTAAAGGACAGATCCTGCACAGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 90 bp | ACCAGGATGCGCTTGCCCCGGAAGGCATCTGGAATCCTGTACTCTTaGCTGTGCAGGATCTGTCCTTTAAACTTATGGATTCCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRMRLPRKASGILYS*LCRICPLNLWIPGK Trigger: CTTTCCTGGAATCCATAAGTTTAAAGGACAGATCCTGCACAGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACACTGCCCTGTCCCGTTaGCCTTCTGTCTCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLKRVSQTPSSIGKLETNTALSR*PSVSVT Trigger: TGTCACAGAGACAGAAGGCAAACGGGACAGGGCAGT...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTACTGCCCTGTCCCGTTaGCCTTCTGTCTCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRAAPICLKRVSQTPSSITALSR*PSVSVT Trigger: TGTCACAGAGACAGAAGGCAAACGGGACAGGGCAGT...AATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 90 bp | GGTATGCTACAGAGTCCTTTGAATACTCTTGTGGCCCATCGTGCTTaGAACTCTGTGCCCACTAAGATCGACCCATTAAGGCTGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GMLQSPLNTLVAHRA*NSVPTKIDPLRLIR Trigger: CCTGATCAGCCTTAATGGGTCGATCTTAGTGGGCACAGAGTTCCAAGCACGATGGGCCACAAGAGTATTCAAAGGACTCTGTAGCATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACTCGTCCAAGCAGCACTaGATAGAGGACAGGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: CLKRVSQTPSSIGKLETNSSKQH*IEDRPL Trigger: AAGTGGCCTGTCCTCTATCAAGTGCTGCTTGGACGA...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCTGGAATCCTGTACTCTaGGCTGTGCAGGATCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ICLKRVSQTPSSIGKLETWNPVL*AVQDLS Trigger: GGACAGATCCTGCACAGCCAAGAGTACAGGATTCCA...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCTTGCTCTCTCCAAATTaGGGGGAAAGACTCGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLRAAPICLKRVSQTPSSLLSPN*GERLAC Trigger: ACAAGCGAGTCTTTCCCCCAAATTTGGAGAGAGCAA...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACATGTGGGCTCAGGAATaGCCCAGTGCAAACCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: CLKRVSQTPSSIGKLETNMWAQE*PSANHN Trigger: GTTATGGTTTGCACTGGGCAATTCCTGAGCCCACAT...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATGCTACAGAGTCCTTaGAATACTCTTGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLRAAPICLKRVSQTPSSMLQSP*NTLVAH Trigger: ATGGGCCACAAGAGTATTCAAAGGACTCTGTAGCAT...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 90 bp | ATGACATTTCTTTGCAGACATTTGTCACTAGTGACCTGTAAACCCTaGTCATCCCATCCTCGGAAGTGTCAGCAAACTTCCACAGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: MTFLCRHLSLVTCKP*SSHPRKCQQTSTVR Trigger: GCGGACTGTGGAAGTTTGCTGACACTTCCGAGGATGGGATGACCAGGGTTTACAGGTCACTAGTGACAAATGTCTGCAAAGAAATGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 ENSMUST00000140274.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCTTGCTCTCTCCAAATTaGGGGGAAAGACTCGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ICLKRVSQTPSSIGKLETLLSPN*GERLAC Trigger: ACAAGCGAGTCTTTCCCCCAAATTTGGAGAGAGCAA...GGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATATGCTACAGAGTCCTTaGAATACTCTTGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VESSTNLFKEGVPDTFLHMLQSP*NTLVAH Trigger: ATGGGCCACAAGAGTATTCAAAGGACTCTGTAGCAT...ATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS TCA 90 bp | CTTTTAATGAGCTGCTCCGTTTTAGTGGCTTCGGCCATCAGTTTCTaGGATGGAGGTATGCTACAGAGTCCTTTGAATACTCTTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLMSCSVLVASAISF*DGGMLQSPLNTLVA Trigger: GGCCACAAGAGTATTCAAAGGACTCTGTAGCATACCTCCATCTCAGAAACTGATGGCCGAAGCCACTAAAACGGAGCAGCTCATTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 90 bp | AAAGAAAACTTCCCAAGCCAATCTTGGATCCTTAATGAACAAAAGTaGAATGCTGGGCTTCGCGCCTATGCACTGAGTGAGCTCGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KENFPSQSWILNEQK*NAGLRAYALSELVH Trigger: ATGGACGAGCTCACTCAGTGCATAGGCGCGAAGCCCAGCATTCCACTTTTGTTCATTAAGGATCCAAGATTGGCTTGGGAAGTTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTGAGAGCAGCACCAATCTGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCACTCGTACAAGGAAATaGAGCCATCTTGTTTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: VLRAAPICLKRVSQTPSSTRTRK*SHLVCI Trigger: GATACAAACAAGATGGCTCAATTTCCTTGTACGAGT...GGAGGAAGGTGTCTGGGACACCCTCTTTAAACAGATTGGTGCTGCTCTCAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GGCATGCCAGTGAGGCATGAACTTGGAAGACACTATGGGAAGAGAGTAGGCATGGTAATGAAGTCCAGTTaGTCTTGGCTGGTATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GMPVRHELGRHYGKRVGMVMKSS*SWLVSL Trigger: TAAAGATACCAGCCAAGACAAACTGGACTTCATTAC...CATGCCTACTCTCTTCCCATAGTGTCTTCCAAGTTCATGCCTCACTGGCATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAAAGTTCATGGAATCCTGTACTCTaGGCTGTGCAGGATCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTASSERFVLCHYMVESSWNPVL*AVQDLS Trigger: GGACAGATCCTGCACAGCCAAGAGTACAGGATTCCA...TGAACTTTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTAAAGAGGGTGTCCCAGACACCTTCCTCCATTGGTAAACTGGAGACCAACGTAATGAAGTCCAGTTaGTCTTGGCTGGTATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CLKRVSQTPSSIGKLETNVMKSS*SWLVSL Trigger: TAAAGATACCAGCCAAGACAAACTGGACTTCATTAC...GTTGGTCTCCAGTTTACCAATGGAGGAAGGTGTCTGGGACACCCTCTTTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS-3UTR CAA 90 bp | GTGACAGCTTCTAGTGAGAGGTTTGTTCTATGTCATTACATGGTAGAAAGTTCAACTCGTACAAGGAAATaGAGCCATCTTGTTTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: VTASSERFVLCHYMVESSTRTRK*SHLVCI Trigger: GATACAAACAAGATGGCTCAATTTCCTTGTACGAGT...TGAACTTTCTACCATGTAATGACATAGAACAAACCTCTCACTAGAAGCTGTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111525.8 |
||
| CDS GCA 72 bp | CGCCAGTGTTTCCAAGACCAACCACCAGGATGCGCTTaGCCCGGAAGGCATCTGGAATCCTGTACTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQCFQDQPPGCA*PGRHLESCTLG Trigger: GCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGTGGTTGGTCTTGGAAACACTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS GCA 72 bp | TGTCCCCGCCAGTGTTTCCAAGACCAACCACCAGGATaGGCTTGCCCCGGAAGGCATCTGGAATCCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: CPRQCFQDQPPG*ACPGRHLESCT Trigger: AGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGTGGTTGGTCTTGGAAACACTGGCGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 72 bp | ACCAACCACCAGGATGCGCTTGCCCCGGAAGGCATCTaGAATCCTGTACTCTTGGCTGTGCAGGATCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TNHQDALAPEGI*NPVLLAVQDLS Trigger: GGACAGATCCTGCACAGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGTGGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CAA 72 bp | CCGCCAGTGTTTCCAAGACCAACCACCAGGATGCGCTaGCCCCGGAAGGCATCTGGAATCCTGTACTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPVFPRPTTRMR*PRKASGILYSW Trigger: CCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGTGGTTGGTCTTGGAAACACTGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CAA 90 bp | CACCAGGATGCGCTTGCCCCGGAAGGCATCTGGAATCCTGTACTCTaGGCTGTGCAGGATCTGTCCTTTAAACTTATGGATTCCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HQDALAPEGIWNPVL*AVQDLSFKLMDSRK Trigger: TTTCCTGGAATCCATAAGTTTAAAGGACAGATCCTGCACAGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCGCATCCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS GCA 72 bp | GAGAAACACCTGAGCTGCTATTTCACTGAGCTCTACTaGTATGTCCCCGCCAGTGTTTCCAAGACCAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: EKHLSCYFTELY*YVPASVSKTNH Trigger: GTGGTTGGTCTTGGAAACACTGGCGGGGACATAGCAGTAGAGCTCAGTGAAATAGCAGCTCAGGTGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 72 bp | TCCCGTTTGCCTTCTGTCTCTGTGACAACATCCCACTaGCCAGTTTCAGAGAAGTCTGGGCGCTTTGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: SRLPSVSVTTSH*PVSEKSGRFVT Trigger: TGTAACAAAGCGCCCAGACTTCTCTGAAACTGGCCAGTGGGATGTTGTCACAGAGACAGAAGGCAAACGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 ENSMUST00000144916.8 |
||
| CDS CCA 72 bp | CGCTTGCCCCGGAAGGCATCTGGAATCCTGTACTCTTaGCTGTGCAGGATCTGTCCTTTAAACTTATGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RLPRKASGILYS*LCRICPLNLWI Trigger: AATCCATAAGTTTAAAGGACAGATCCTGCACAGCCAAGAGTACAGGATTCCAGATGCCTTCCGGGGCAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 72 bp | CAGAGTCCTTTGAATACTCTTGTGGCCCATCGTGCTTaGAACTCTGTGCCCACTAAGATCGACCCATTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSPLNTLVAHRA*NSVPTKIDPLR Trigger: CCTTAATGGGTCGATCTTAGTGGGCACAGAGTTCCAAGCACGATGGGCCACAAGAGTATTCAAAGGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
||
| CDS CCA 72 bp | CTTTGCAGACATTTGTCACTAGTGACCTGTAAACCCTaGTCATCCCATCCTCGGAAGTGTCAGCAAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCRHLSLVTCKP*SSHPRKCQQTS Trigger: GGAAGTTTGCTGACACTTCCGAGGATGGGATGACCAGGGTTTACAGGTCACTAGTGACAAATGTCTGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 ENSMUST00000140274.2 |
||
| CDS TCA 72 bp | AGCTGCTCCGTTTTAGTGGCTTCGGCCATCAGTTTCTaGGATGGAGGTATGCTACAGAGTCCTTTGAATACT | + |
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Preference number: 6 (lower is better) Translates to: SCSVLVASAISF*DGGMLQSPLNT Trigger: AGTATTCAAAGGACTCTGTAGCATACCTCCATCTCAGAAACTGATGGCCGAAGCCACTAAAACGGAGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS CCA 72 bp | CTCCGTTTTAGTGGCTTCGGCCATCAGTTTCTGAGATaGAGGTATGCTACAGAGTCCTTTGAATACTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LRFSGFGHQFLR*RYATESFEYSC Trigger: ACAAGAGTATTCAAAGGACTCTGTAGCATACCTCCATCTCAGAAACTGATGGCCGAAGCCACTAAAACGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS CAA 90 bp | ATAATGGCTAATGTTGCTCTCTCCAAATTTGGGGGAAAGACTCGCTaGTATAGGATGATCTTCTTTGTACAAAGGCTTTTGAGAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: IMANVALSKFGGKTR*YRMIFFVQRLLRGS Trigger: AGAACCTCTCAAAAGCCTTTGTACAAAGAAGATCATCCTATACAAGCGAGTCTTTCCCCCAAATTTGGAGAGAGCAACATTAGCCATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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| CDS CAA 72 bp | AATGTTGCTCTCTCCAAATTTGGGGGAAAGACTCGCTaGTATAGGATGATCTTCTTTGTACAAAGGCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: NVALSKFGGKTR*YRMIFFVQRLL Trigger: CAAAAGCCTTTGTACAAAGAAGATCATCCTATACAAGCGAGTCTTTCCCCCAAATTTGGAGAGAGCAACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028014.10 ENSMUST00000111525.8 |
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