Pregenerated sensors for FLVCR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066595Ensembl transcript IDs: ENSMUST00000085635.6, ENSMUST00000191946.2, ENSMUST00000192666.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGTCCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAGTGCTGGCTaGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GVLSQELSSSPVSAG*EYTLEPPCQAFLVV Trigger: CACCACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGAAAGGACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR CCA 90 bp | CCTCGGTGTCCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAGTGCTaGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCGT | + |
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Preference number: 1 (lower is better) Translates to: PRCPFSGAVLLTCQC*LGIHPGATVPGFSR Trigger: ACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGAAAGGACACCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR GCA 90 bp | CAACCTCGGTGTCCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAGTaGTGGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: QPRCPFSGAVLLTCQ*WLGIHPGATVPGFS Trigger: AGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGAAAGGACACCGAGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR GCA 90 bp | GCGACAAAAACACCTGAGATCTCTTTTACCGCCAGTTTCCAAGCGTaGCCGTGTGTGCGCCTGTGTGTAGGCCAGAGGGCAACCTCGGTG | + |
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Preference number: 1 (lower is better) Translates to: ATKTPEISFTASFQA*PCVRLCVGQRATSV Trigger: CACCGAGGTTGCCCTCTGGCCTACACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTCAGGTGTTTTTGTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR GCA 90 bp | GTACGAGATAGTGTCCACAGAGTACTGACTACACACACGGTGTGGTaGAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: VRDSVHRVLTTHTVW*SRTCSQRSQDMCKG Trigger: GCCCTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACTCTGTGGACACTATCTCGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR CCA 90 bp | TGTGTACGAGATAGTGTCCACAGAGTACTGACTACACACACGGTGTaGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: CVRDSVHRVLTTHTV*CSRTCSQRSQDMCK Trigger: CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACTCTGTGGACACTATCTCGTACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR GCA 90 bp | CAGAACTCATCCAATAATTTTCAAGTGCCTCACACCTCACACAGCTaGCCAAAGACGAAGCCACATGCCCATGTTGAGGGGCAGCCACAC | + |
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Preference number: 1 (lower is better) Translates to: QNSSNNFQVPHTSHS*PKTKPHAHVEGQPH Trigger: GTGTGGCTGCCCCTCAACATGGGCATGTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGGATGAGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR TCA 90 bp | ACTCTAACCGTGACCCTGACATGGTCAGTACAGTCAGGTGACAACTaGCTGGGAATGTACCAGATGTGTTTATGTGTGAATTGCACACTC | + |
|
Preference number: 1 (lower is better) Translates to: TLTVTLTWSVQSGDN*LGMYQMCLCVNCTL Trigger: GAGTGTGCAATTCACACATAAACACATCTGGTACATTCCCAGTCAGTTGTCACCTGACTGTACTGACCATGTCAGGGTCACGGTTAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR TCA 90 bp | CACTGTGACTCTAACCGTGACCCTGACATGGTCAGTACAGTCAGGTaGCAACTGACTGGGAATGTACCAGATGTGTTTATGTGTGAATTG | + |
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Preference number: 1 (lower is better) Translates to: HCDSNRDPDMVSTVR*QLTGNVPDVFMCEL Trigger: CAATTCACACATAAACACATCTGGTACATTCCCAGTCAGTTGTCACCTGACTGTACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR GCA 90 bp | TCACCGGAGCATTTATTGAACATTCACTTATACGTGACCAGTAGGTaGCAAGCTGGGCTGACTACTAATACTAATACAATTAAATCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SPEHLLNIHLYVTSR*QAGLTTNTNTIKSG Trigger: CCCTGATTTAATTGTATTAGTATTAGTAGTCAGCCCAGCTTGGCACCTACTGGTCACGTATAAGTGAATGTTCAATAAATGCTCCGGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR CCA 90 bp | TATAGACACCATCACTTTGGGTTTTGGATCTACCCGACTATCAACTaGTACAGCTTTAACGTCAATGTTTGTAAGCCCGGTGTTTATATT | + |
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Preference number: 1 (lower is better) Translates to: YRHHHFGFWIYPTIN*YSFNVNVCKPGVYI Trigger: AATATAAACACCGGGCTTACAAACATTGACGTTAAAGCTGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR TCA 90 bp | AATAGACAAAAGCTATGTCACAACATTTACAGATGCAACAGCTTCTaGAACCATCTGATGAAGGCAGACACAGGTGATGATAATTACTAC | + |
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Preference number: 1 (lower is better) Translates to: NRQKLCHNIYRCNSF*NHLMKADTGDDNYY Trigger: GTAGTAATTATCATCACCTGTGTCTGCCTTCATCAGATGGTTTCAGAAGCTGTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR CCA 90 bp | AATACTAATACAATTAAATCAGGGCTGTTCCAAGGACATTTAACATaGAAACAAACTTTCCAGATCTCAAGACCTTTCTTCTGCAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: NTNTIKSGLFQGHLT*KQTFQISRPFFCSG Trigger: GCCACTGCAGAAGAAAGGTCTTGAGATCTGGAAAGTTTGTTTCCATGTTAAATGTCCTTGGAACAGCCCTGATTTAATTGTATTAGTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGCCACATGCCCATGTTaGGGGGCAGCCACACCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LMGLCIHTVTLTVTLTWSATCPC*GAATPA Trigger: AGCCGGTGTGGCTGCCCCTCAACATGGGCATGTGGC...TGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCATGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCCGTGTGTGCGCCTGTGTGTACCCCAGCCCGGCCTATaGCTTCCTACCAGCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: EISFTASFQACPCVRLCVPQPGL*LPTSLK Trigger: TTTCAGGCTGGTAGGAAGTCATAGGCCGGGCTGGGG...TACACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGAGCCCTGAGGACATaGCCTCAGACTCAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: STDYTHGVVQQNLLPAFTGALRT*PQTQGR Trigger: CCTACCCTGAGTCTGAGGGCATGTCCTCAGGGCTCC...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACACCAGCCCTGTCCGAGTaGGTCAGTGCTTCTCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: STDYTHGVVQQNLLPAFTPALSE*VSASHG Trigger: CCCATGAGAAGCACTGACCCACTCGGACAGGGCTGG...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR CAA 90 bp | CTCACACCTCACACAGCTGCCCAAAGACGAAGCCACATGCCCATGTaGAGGGGCAGCCACACCGGCTTCTTCAGAGTGAAGATTCCGACT | + |
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Preference number: 2 (lower is better) Translates to: LTPHTAAQRRSHMPM*RGSHTGFFRVKIPT Trigger: AGTCGGAATCTTCACTCTGAAGAAGCCGGTGTGGCTGCCCCTCAACATGGGCATGTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAAGACAGGGTGTAGGTGTGTTCCACCACTGCCCAGATTGCAGTTAGATGCCACATGCCCATGTTaGGGGGCAGCCACACCGGCT | + |
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Preference number: 2 (lower is better) Translates to: FFKTGCRCVPPLPRLQLDATCPC*GAATPA Trigger: AGCCGGTGTGGCTGCCCCTCAACATGGGCATGTGGC...ATCTAACTGCAATCTGGGCAGTGGTGGAACACACCTACACCCTGTCTTGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | CACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGGGAAAGAAGATCTCAGATaGTCTGTGTGTGTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HGVVQQNLLPAFTGHVQGKEDLR*SVCVSA Trigger: AGCTGAGACACACACAGATCATCTGAGATCTTCTTT...CCCTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGAGGTAACCAGTCATaGAGAAGCCAAGAATCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: STDYTHGVVQQNLLPAFTGGNQS*RSQESH Trigger: GTGGGATTCTTGGCTTCTTCATGACTGGTTACCTCC...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTCCAGCCCTGTCCGAGTaGGTCAGTGCTTCTCATGGG | + |
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Preference number: 2 (lower is better) Translates to: TAASISRTLHRMETHGLSPALSE*VSASHG Trigger: CCCATGAGAAGCACTGACCCACTCGGACAGGGCTGG...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | CACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGCCGGTGTTTATATTGTaGCTTCTCAGATCAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: HTVWCSRTCSQRSQDMCKPVFIL*LLRSDL Trigger: CAAGTCTGATCTGAGAAGGCACAATATAAACACCGG...CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACACAGGTGACAACTGACTaGGAATGTACCAGATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: STDYTHGVVQQNLLPAFTQVTTD*ECTRCV Trigger: AACACATCTGGTACATTCCCAGTCAGTTGTCACCTG...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTCAGTACAGTCAGGTaGCAACTGACTGGGAATGTA | + |
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Preference number: 2 (lower is better) Translates to: LMGLCIHTVTLTVTLTWSVSTVR*QLTGNV Trigger: TACATTCCCAGTCAGTTGTCACCTGACTGTACTGAC...TGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTCACACCTCACACAGCTaGCCAAAGACGAAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: TAASISRTLHRMETHGLSHTSHS*PKTKPH Trigger: ATGTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTG...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTCTGCAGTGGCGACAAAAACACCTGAGATCTCTTTTACCGCCAGTTTCCTCACCTGTCAGTGCTaGCTGGGAATACACCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSSAVATKTPEISFTASFLTCQC*LGIHPG Trigger: TCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAG...GAAACTGGCGGTAAAAGAGATCTCAGGTGTTTTTGTCGCCACTGCAGAAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACATCTGCTTGTAGGTTTTaGTATAGTCCAGCCATAAGC | + |
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Preference number: 2 (lower is better) Translates to: STDYTHGVVQQNLLPAFTSACRF*YSPAIS Trigger: GCTTATGGCTGGACTATACCAAAACCTACAAGCAGA...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | GATCAGTGTGAATGCATTATTTCATGGATCAGGAAAATGTTGCCGGAGAGGGTAACACACACGGTGTGGTaGAGCAGAACCTGCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DQCECIISWIRKMLPERVTHTVW*SRTCSQ Trigger: CTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGT...TACCCTCTCCGGCAACATTTTCCTGATCCATGAAATAATGCATTCACACTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTACCAATAATTTTCAAGTaGCTCACACCTCACACAGCT | + |
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Preference number: 2 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVPIIFK*LTPHTA Trigger: AGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTCAGGTGACAACTGACTaGGAATGTACCAGATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TAASISRTLHRMETHGLSQVTTD*ECTRCV Trigger: AACACATCTGGTACATTCCCAGTCAGTTGTCACCTG...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | TGTATAGACACCATCACTTTGGGTTTTGGATCTACCCGACTATCAACTGGTACAGGTCAGTGCTTCTCATaGGACTCTGCATTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: CIDTITLGFGSTRLSTGTGQCFS*DSAFTL Trigger: CAGTGTGAATGCAGAGTCCCATGAGAAGCACTGACC...TGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTCACACCTCACACAGCTaGCCAAAGACGAAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSHTSHS*PKTKPH Trigger: ATGTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTG...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR CAA 90 bp | CATTTAGATCAGTGTGAATGCATTATTTCATGGATCAGGAAAATGTaGCCGGAGAGGGTAAATGATGTGTCCAGAGTTACCAAGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HLDQCECIISWIRKM*PERVNDVSRVTKAE Trigger: TTCTGCCTTGGTAACTCTGGACACATCATTTACCCTCTCCGGCAACATTTTCCTGATCCATGAAATAATGCATTCACACTGATCTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACGCCGGAGAGGGTAAATaGTGTGTCCAGAGTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNAGEGK*CVQSYQ Trigger: TTGGTAACTCTGGACACATCATTTACCCTCTCCGGC...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTCAGACTCAGGGTAGGTaGTCTCCACAGCAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSQTQGR*SPQQTQ Trigger: TTGAGTTTGCTGTGGAGATCACCTACCCTGAGTCTG...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCAAGACAGGGTGTAGGTGTGTTCCACCACTGCCCAGATTGCAGTTAGATTTAGATCAGTGTGAATaGATTATTTCATGGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: FFKTGCRCVPPLPRLQLDLDQCE*IISWIR Trigger: CCTGATCCATGAAATAATGCATTCACACTGATCTAA...ATCTAACTGCAATCTGGGCAGTGGTGGAACACACCTACACCCTGTCTTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATAGACACCATCACTTTGGGTTTTGGATCTACCCGACTATCAACTGGTACAACGCTGTTAAAATTATaGCTACAAACATCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: CIDTITLGFGSTRLSTGTTLLKL*LQTSRH Trigger: GTGCCTGGATGTTTGTAGGCATAATTTTAACAGCGT...TGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR CAA 90 bp | ATGTTTGTAAGCCCGGTGTTTATATTGTGCCTTCTCAGATCAGACTaGATCAACGCTGTTAAAATTATGCCTACAAACATCCAGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: MFVSPVFILCLLRSD*INAVKIMPTNIQAQ Trigger: TTGTGCCTGGATGTTTGTAGGCATAATTTTAACAGCGTTGATCAAGTCTGATCTGAGAAGGCACAATATAAACACCGGGCTTACAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACGTCAGTACAGTCAGGTaGCAACTGACTGGGAATGTA | + |
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Preference number: 2 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNVSTVR*QLTGNV Trigger: TACATTCCCAGTCAGTTGTCACCTGACTGTACTGAC...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR TCA 90 bp | GATCAGTGTGAATGCATTATTTCATGGATCAGGAAAATGTTGCCGGAGAGGGTATTCCTTGAGCCAATGTaGAGAAAATTCCAAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: DQCECIISWIRKMLPERVFLEPM*RKFQVS Trigger: AGATACTTGGAATTTTCTTCACATTGGCTCAAGGAA...TACCCTCTCCGGCAACATTTTCCTGATCCATGAAATAATGCATTCACACTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| 3UTR-3UTR GCA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTCTTCTCATGGGACTCTaGATTCACACTGTGACTCTA | + |
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Preference number: 2 (lower is better) Translates to: DTKPEFLILSDTKFFQYILLMGL*IHTVTL Trigger: TAGAGTCACAGTGTGAATGCAGAGTCCCATGAGAAG...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGTTCCTTCCTCCTTTTTaGTTTTTCAAGACAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: NNTVNLETETAGGDSAFLFLPPF*FFKTGC Trigger: ACACCCTGTCTTGAAAAACCAAAAAGGAGGAAGGAA...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR-3UTR CCA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTCATCACTTTGGGTTTTaGATCTACCCGACTATCAAC | + |
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Preference number: 2 (lower is better) Translates to: DTKPEFLILSDTKFFQYIHHFGF*IYPTIN Trigger: GTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATG...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACCCAATAATTTTCAAGTaGCTCACACCTCACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNPIIFK*LTPHTA Trigger: AGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACAGAGCTGAAGTTCTCTaGCTCTACATAACCAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNRAEVL*LYITNH Trigger: GTGATTGGTTATGTAGAGGCAGAGAACTTCAGCTCT...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | CCTCCTCACCTGTCAGTGCTGGCTGGGAATACACCCTaGAGCCACCGTGCCAGGCTTTTCTCGTGGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PPHLSVLAGNTP*SHRARLFSWCW Trigger: CCAGCACCACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR CCA 72 bp | CCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAGTGCTaGCTGGGAATACACCCTGGAGCCACCGTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PFSGAVLLTCQC*LGIHPGATVPG Trigger: GCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR CCA 72 bp | TCTCAGGAGCTGTCCTCCTCACCTGTCAGTGCTGGCTaGGAATACACCCTGGAGCCACCGTGCCAGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SQELSSSPVSAG*EYTLEPPCQAF Trigger: AAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR GCA 72 bp | ACACCTGAGATCTCTTTTACCGCCAGTTTCCAAGCGTaGCCGTGTGTGCGCCTGTGTGTAGGCCAGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPEISFTASFQA*PCVRLCVGQRA Trigger: TGCCCTCTGGCCTACACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTCAGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTAAGCCACATGCCCATGTaGAGGGGCAGCCACACCGGC | + |
|
Preference number: 3 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVSHMPM*RGSHTG Trigger: GCCGGTGTGGCTGCCCCTCAACATGGGCATGTGGCT...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR GCA 72 bp | AGTGTCCACAGAGTACTGACTACACACACGGTGTGGTaGAGCAGAACCTGCTCCCAGCGTTCACAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: SVHRVLTTHTVW*SRTCSQRSQDM Trigger: CATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACTCTGTGGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | GATAGTGTCCACAGAGTACTGACTACACACACGGTGTaGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DSVHRVLTTHTV*CSRTCSQRSQD Trigger: GTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACTCTGTGGACACTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGCCATCACTTTGGGTTTaGGATCTACCCGACTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: HTVWCSRTCSQRSQDMCKPSLWV*DLPDYQ Trigger: TTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGG...CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | GTCCTGAGTGTGTACGAGATAGTGTCCACAGAGTACTaGCTACACACACGGTGTGGTGCAGCAGAACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSVYEIVSTEY*LHTRCGAAEPA Trigger: AGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACTCTGTGGACACTATCTCGTACACACTCAGGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR GCA 72 bp | TCCAATAATTTTCAAGTGCCTCACACCTCACACAGCTaGCCAAAGACGAAGCCACATGCCCATGTTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SNNFQVPHTSHS*PKTKPHAHVEG Trigger: CCCCTCAACATGGGCATGTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | GACAGAACATGTCACAATACACAGGTGTGTAAGAGATaGGAATCTAACCCCAGCCCTGTCCGAGTGGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DRTCHNTQVCKR*ESNPSPVRVGQ Trigger: CTGACCCACTCGGACAGGGCTGGGGTTAGATTCCCATCTCTTACACACCTGTGTATTGTGACATGTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | TCAAGACCTTTCTTCTGCAGTGGCGACAAAAACACCTaGGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRPFFCSGDKNT*DLFYRQFPSVP Trigger: GGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTCAGGTGTTTTTGTCGCCACTGCAGAAGAAAGGTCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTCAAGACAGGGTGTAGGTGTGTTCCACCACTGCCCAGATTGCAGTTAGATAGCCCGGTGTTTATATaGTGCCTTCTCAGATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FFKTGCRCVPPLPRLQLDSPVFI*CLLRSD Trigger: GTCTGATCTGAGAAGGCACAATATAAACACCGGGCT...ATCTAACTGCAATCTGGGCAGTGGTGGAACACACCTACACCCTGTCTTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTATAGACACCATCACTTaGGGTTTTGGATCTACCCGA | + |
|
Preference number: 3 (lower is better) Translates to: TAASISRTLHRMETHGLSIDTIT*GFGSTR Trigger: TCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTAT...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | TTCATGGATCAGGAAAATGTTGCCGGAGAGGGTAAATaGTGTGTCCAGAGTTACCAAGGCAGAACATGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FMDQENVAGEGK*CVQSYQGRTCP Trigger: TGGGCATGTTCTGCCTTGGTAACTCTGGACACATCATTTACCCTCTCCGGCAACATTTTCCTGATCCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | GTGACCCTGACATGGTCAGTACAGTCAGGTGACAACTaGCTGGGAATGTACCAGATGTGTTTATGTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VTLTWSVQSGDN*LGMYQMCLCVN Trigger: ATTCACACATAAACACATCTGGTACATTCCCAGTCAGTTGTCACCTGACTGTACTGACCATGTCAGGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | ACTAGATTACTTCCTTCCTCCTTCCTTCCTCCTTTTTaGTTTTTCAAGACAGGGTGTAGGTGTGTTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TRLLPSSFLPPF*FFKTGCRCVPP Trigger: TGGTGGAACACACCTACACCCTGTCTTGAAAAACCAAAAAGGAGGAAGGAAGGAGGAAGGAAGTAATCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | ACAAACTTTCCAGATCTCAAGACCTTTCTTCTGCAGTaGCGACAAAAACACCTGAGATCTCTTTTACCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TNFPDLKTFLLQ*RQKHLRSLLPP Trigger: TGGCGGTAAAAGAGATCTCAGGTGTTTTTGTCGCCACTGCAGAAGAAAGGTCTTGAGATCTGGAAAGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR CCA 72 bp | CATCACTTTGGGTTTTGGATCTACCCGACTATCAACTaGTACAGCTTTAACGTCAATGTTTGTAAGCCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: HHFGFWIYPTIN*YSFNVNVCKPG Trigger: ACCGGGCTTACAAACATTGACGTTAAAGCTGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTATCTGTGCAGCAGTGTaGAGGAGCCCTGAGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSICAAV*RSPEDM Trigger: CATGTCCTCAGGGCTCCTCAACACTGCTGCACAGAT...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | AGATTCCGACTGTATAGACACCATCACTTTGGGTTTTaGATCTACCCGACTATCAACTGGTACAGCTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RFRLYRHHHFGF*IYPTINWYSFN Trigger: GTTAAAGCTGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTATACAGTCGGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | AAGCTATGTCACAACATTTACAGATGCAACAGCTTCTaGAACCATCTGATGAAGGCAGACACAGGTGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: KLCHNIYRCNSF*NHLMKADTGDD Trigger: ATCATCACCTGTGTCTGCCTTCATCAGATGGTTTCAGAAGCTGTTGCATCTGTAAATGTTGTGACATAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | GCCCGGTGTTTATATTGTGCCTTCTCAGATCAGACTTaGTCAACGCTGTTAAAATTATGCCTACAAACATCC | + |
|
Preference number: 3 (lower is better) Translates to: ARCLYCAFSDQT*STLLKLCLQTS Trigger: GGATGTTTGTAGGCATAATTTTAACAGCGTTGATCAAGTCTGATCTGAGAAGGCACAATATAAACACCGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTACAGACTTCCTTATCTaGGGCATCTTCGAGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DTKPEFLILSDTKFFQYITDFLI*GIFEAK Trigger: TTTTGCCTCGAAGATGCCCAAGATAAGGAAGTCTGT...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR TCA 72 bp | GGAGTGCTAACACGAGGACATTGTAAGCACAATCGCTaGTTAACACAAAACAAAATATTCAGAACTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: GVLTRGHCKHNR*LTQNKIFRTHP Trigger: TGGATGAGTTCTGAATATTTTGTTTTGTGTTAATCAGCGATTGTGCTTACAATGTCCTCGTGTTAGCACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR GCA 72 bp | TTAACGTCAATGTTTGTAAGCCCGGTGTTTATATTGTaGCTTCTCAGATCAGACTTGATCAACGCTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTSMFVSPVFIL*LLRSDLINAVK Trigger: TTTAACAGCGTTGATCAAGTCTGATCTGAGAAGGCACAATATAAACACCGGGCTTACAAACATTGACGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR CCA 72 bp | ACAATTAAATCAGGGCTGTTCCAAGGACATTTAACATaGAAACAAACTTTCCAGATCTCAAGACCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TIKSGLFQGHLT*KQTFQISRPFF Trigger: GAAGAAAGGTCTTGAGATCTGGAAAGTTTGTTTCCATGTTAAATGTCCTTGGAACAGCCCTGATTTAATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| 3UTR CCA 72 bp | ATTTTGTTGGTTTGTTTGTTTGTTTGTTTGTTTTTGTaGGACAGAACATGTCACAATACACAGGTGTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILLVCLFVCLFL*DRTCHNTQVCK Trigger: CTTACACACCTGTGTATTGTGACATGTTCTGTCCCACAAAAACAAACAAACAAACAAACAAACCAACAAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTGGTGCTGGAGCGCCGCTATCAGGGCTTaGGGCCCGCCCTGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGNTPWSHRARLFSWCWSAAIRA*GPPWAP Trigger: GGGAGCCCAGGGCGGGCCGCAAGCCCTGATAGCGGC...GCTCCAGCACCACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR GCA 90 bp | CACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGGCCGCTATCAGGGCTTaGGGCCCGCCCTGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVWCSRTCSQRSQDMCKAAIRA*GPPWAP Trigger: GGGAGCCCAGGGCGGGCCGCAAGCCCTGATAGCGGC...CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTGGTGCTGGAGCCCAGTCTTCACAGGTGGCCGGGAAGATaGGGGGCACGTAGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TLEPPCQAFLVVLEPSLHRWPGR*GARRPP Trigger: TGGTGGCCTACGTGCCCCTCATCTTCCCGGCCACCT...GTGAAGACTGGGCTCCAGCACCACGAGAAAAGCCTGGCACGGTGGCTCCAGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTGGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTGGTGCACGCTGCCGCACTTaGCCCAGGCTCCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCWLGIHPGATVPGFSRGARCRT*PRLPGS Trigger: ACTGCCTGGGAGCCTGGGTCAAGTGCGGCAGCGTGC...ACCACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR CCA 90 bp | CACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGGGCAACAGCCGGGCCTaGGTCTCCTCCTCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTVWCSRTCSQRSQDMCKGNSRA*VSSSAA Trigger: AGCGGCGGAGGAGGAGACCCAGGCCCGGCTGTTGCC...CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCCGTGTGTGCGCCTGTGTGGGGACACGCGGGGCATaGGACGTCCTCCCCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSLLPPVSKRARVCACVGTRGA*DVLPVA Trigger: GGCGACGGGGAGGACGTCCCATGCCCCGCGTGTCCC...CACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR CCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGGACACGCGGGGCATaGGACGTCCTCCCCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: STDYTHGVVQQNLLPAFTGTRGA*DVLPVA Trigger: GGCGACGGGGAGGACGTCCCATGCCCCGCGTGTCCC...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | GAGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCCGTGTGTGCGCCTGTGTGTAAGGCTCCCAGGCAGTTaGGGCCGGAGCCCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EISFTASFQACPCVRLCVRLPGS*GRSPAA Trigger: CGCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCT...TACACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGCTGTCCTCCTCACCTGTCAGTGCTGGCTGGGAATACACCCTGGAGCCACCCATGGACAGCCAGTTaGTGTGCAGCGGCGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCPPHLSVLAGNTPWSHPWTAS*CAAATP Trigger: AGGTGTCGCCGCTGCACATCAACTGGCTGTCCATGG...GTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCAGTGCTGGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCAGAAGAGGTGCCGCTaGACGCTGCCGCACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TCQCWLGIHPGATVPGFSQKRCR*TLPHLT Trigger: GGTCAAGTGCGGCAGCGTGCAGCGGCACCTCTTCTG...AGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTGGTGCTGGAGCCCAGTCTTCACCCTCGAACACGTTGCTaGTGCTGCTGTACTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TLEPPCQAFLVVLEPSLHPRTRC*CCCTGS Trigger: GGATCCAGTACAGCAGCATCAGCAACGTGTTCGAGG...GTGAAGACTGGGCTCCAGCACCACGAGAAAAGCCTGGCACGGTGGCTCCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTCCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAGTGCTGGCTGGGAATACTCTGCCCCAGCATGGTaGCCCAGAAGAGGTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVLSQELSSSPVSAGWEYSAPAW*PRRGAA Trigger: AGCGGCACCTCTTCTGGGTCACCATGCTGGGGCAGA...GTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGAAAGGACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR GCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACGCCGCTATCAGGGCTTaGGGCCCGCCCTGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHAAIRA*GPPWAP Trigger: GGGAGCCCAGGGCGGGCCGCAAGCCCTGATAGCGGC...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | GAGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCCGTGTGTGCGCCTGTGTGTAGTGACCCAGAAGAGGTaGCGCTGCACGCTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EISFTASFQACPCVRLCVVTQKR*RCTLPH Trigger: GTGCGGCAGCGTGCAGCGGCACCTCTTCTGGGTCAC...TACACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCAGTGCTGGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTACGGAGCACAGGATCTaGCCCAGCATGGTGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCQCWLGIHPGATVPGFSTEHRI*PSMVTQ Trigger: CTGGGTCACCATGCTGGGGCAGATCCTGTGCTCCGT...AGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR CCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACGGGACACGCGGGGCATaGGACGTCCTCCCCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHGTRGA*DVLPVA Trigger: GGCGACGGGGAGGACGTCCCATGCCCCGCGTGTCCC...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTAGCCCAGCAGCGCCGTaGGCCGCAGGCCTCGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAASISRTLHRMETHGLSSPAAP*AAGLAC Trigger: ACACGCGAGGCCTGCGGCTCACGGCGCTGCTGGGCT...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTAAGGCTCCCAGGCAGTTaGGGCCGGAGCCCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVRLPGS*GRSPAA Trigger: CGCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCT...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGCGCCCTTGGGCACTaGAAGGTATCCCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STDYTHGVVQQNLLPAFTGALGH*KVSLPQ Trigger: CTGGGGAAGGGATACCTTCCAGTGCCCAAGGGCGCC...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTAGGCAACAGCCGGGCCTaGGTCTCCTCCTCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVGNSRA*VSSSAA Trigger: AGCGGCGGAGGAGGAGACCCAGGCCCGGCTGTTGCC...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | CACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGCTGTACTGGATCCACTaGAAGGCGTTCACCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTVWCSRTCSQRSQDMCKLYWIH*KAFTSE Trigger: CTCGCTGGTGAACGCCTTCCAGTGGATCCAGTACAG...CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| 3UTR CAA 72 bp | CACACAGCTGCCCAAAGACGAAGCCACATGCCCATGTaGAGGGGCAGCCACACCGGCTTCTTCAGAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTAAQRRSHMPM*RGSHTGFFRVK Trigger: CTTCACTCTGAAGAAGCCGGTGTGGCTGCCCCTCAACATGGGCATGTGGCTTCGTCTTTGGGCAGCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACAGGTGGCCGGGAAGATaGGGGGCACGTAGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHRWPGR*GARRPP Trigger: TGGTGGCCTACGTGCCCCTCATCTTCCCGGCCACCT...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTGCTGGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTGTTCCAGTCTTTACCTaGTTGCCCAGCACTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CQCWLGIHPGATVPGFSRVPVFT*LPSTAV Trigger: CACAGCAGTGCTGGGCAATCAGGTAAAGACTGGAAC...ACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR GCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACACTGATTGCCCAGCACTaGTGTGGCACAAGCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: STDYTHGVVQQNLLPAFTLIAQH*CGTSRR Trigger: TCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAG...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTGCTGGCTGGGAATACACCCTGGAGCCACCGTGCCAGGCTTTTCTCGTCAGTCTTTACCTGATTaGCCAGCACTGCTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CQCWLGIHPGATVPGFSRQSLPD*PALLWH Trigger: GTGCCACAGCAGTGCTGGGCAATCAGGTAAAGACTG...ACGAGAAAAGCCTGGCACGGTGGCTCCAGGGTGTATTCCCAGCCAGCACTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTAGGTGGCCGGGAAGATaGGGGGCACGTAGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TAASISRTLHRMETHGLSRWPGR*GARRPP Trigger: TGGTGGCCTACGTGCCCCTCATCTTCCCGGCCACCT...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR TCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTATCTGCCCCAGCATGGTaGCCCAGAAGAGGTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVSAPAW*PRRGAA Trigger: AGCGGCACCTCTTCTGGGTCACCATGCTGGGGCAGA...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACTCTGCCCCAGCATGGTaGCCCAGAAGAGGTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHSAPAW*PRRGAA Trigger: AGCGGCACCTCTTCTGGGTCACCATGCTGGGGCAGA...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | GAGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCCGTGTGTGCGCCTGTGTGTACTGTACTGGATCCACTaGAAGGCGTTCACCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EISFTASFQACPCVRLCVLYWIH*KAFTSE Trigger: CTCGCTGGTGAACGCCTTCCAGTGGATCCAGTACAG...TACACACAGGCGCACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACCCATGGACAGCCAGTTaGTGTGCAGCGGCGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHPWTAS*CAAATP Trigger: AGGTGTCGCCGCTGCACATCAACTGGCTGTCCATGG...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | GATCAGTGTGAATGCATTATTTCATGGATCAGGAAAATGTTGCCGGAGAGGGTAAGGCTCCCAGGCAGTTaGGGCCGGAGCCCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DQCECIISWIRKMLPERVRLPGS*GRSPAA Trigger: CGCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCT...TACCCTCTCCGGCAACATTTTCCTGATCCATGAAATAATGCATTCACACTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGAAACAAACTTTCCAGATCTCAAGACCTTTCTTCTGCAGTGGCGACGGCAACAGCCGGGCCTaGGTCTCCTCCTCCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTWKQTFQISRPFFCSGDGNSRA*VSSSAA Trigger: AGCGGCGGAGGAGGAGACCCAGGCCCGGCTGTTGCC...GTCGCCACTGCAGAAGAAAGGTCTTGAGATCTGGAAAGTTTGTTTCCATGTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR TCA 90 bp | AGGACATTTAACATGGAAACAAACTTTCCAGATCTCAAGACCTTTCTTCTGCAGAGCCCAGCAGCGCCGTaGGCCGCAGGCCTCGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTFNMETNFPDLKTFLLQSPAAP*AAGLAC Trigger: ACACGCGAGGCCTGCGGCTCACGGCGCTGCTGGGCT...CTGCAGAAGAAAGGTCTTGAGATCTGGAAAGTTTGTTTCCATGTTAAATGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCATGCCTGAGCCTGACTTaGAGGCAACGGAGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMGLCIHTVTLTVTLTWSCLSLT*RQRRFL Trigger: GAGAAACCTCCGTTGCCTCCAAGTCAGGCTCAGGCA...TGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACCCTCGAACACGTTGCTaGTGCTGCTGTACTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHPRTRC*CCCTGS Trigger: GGATCCAGTACAGCAGCATCAGCAACGTGTTCGAGG...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR TCA 90 bp | ATTCCAAGTATCTGTGCAGCAGTGTTGAGGAGCCCTGAGGACATGCCCTCAGACTTTCTCCTTGAATGCTaGTTGCCCAGCACTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSICAAVLRSPEDMPSDFLLEC*LPSTAV Trigger: CACAGCAGTGCTGGGCAATCAGCATTCAAGGAGAAA...GTCTGAGGGCATGTCCTCAGGGCTCCTCAACACTGCTGCACAGATACTTGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | TGTATAGACACCATCACTTTGGGTTTTGGATCTACCCGACTATCAACTGGTACAGTGACCCAGAAGAGGTaGCGCTGCACGCTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CIDTITLGFGSTRLSTGTVTQKR*RCTLPH Trigger: GTGCGGCAGCGTGCAGCGGCACCTCTTCTGGGTCAC...TGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTCTGATTGCCCAGCACTaGTGTGGCACAAGCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TAASISRTLHRMETHGLSLIAQH*CGTSRR Trigger: TCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAG...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR GCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACCAGTTCCAAGCTGATTaGCCAGCACTGCTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHQFQAD*PALLWH Trigger: GTGCCACAGCAGTGCTGGGCAATCAGCTTGGAACTG...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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| CDS-3UTR GCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACGCTGTCTCGAAGAACTaGCTGAGCCTGACTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHAVSKN*LSLTWR Trigger: CCTCCAAGTCAGGCTCAGGCAGTTCTTCGAGACAGC...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR TCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACAGCCCAGCAGCGCCGTaGGCCGCAGGCCTCGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNSPAAP*AAGLAC Trigger: ACACGCGAGGCCTGCGGCTCACGGCGCTGCTGGGCT...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR TCA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTGCACGCTGCCGCACTTaGCCCAGGCTCCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKPEFLILSDTKFFQYIARCRT*PRLPGS Trigger: ACTGCCTGGGAGCCTGGGTCAAGTGCGGCAGCGTGC...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTGTGTTATTCTGTGTGTaGGCCAGGAGGCCTGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TAASISRTLHRMETHGLSVLFCV*ARRPVL Trigger: TAGCACAGGCCTCCTGGCTCACACACAGAATAACAC...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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| CDS-3UTR TCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTAGGAGGTAACCAGTCATaGAGAAGCCAAGAATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVGGNQS*RSQESH Trigger: GTGGGATTCTTGGCTTCTTCATGACTGGTTACCTCC...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR TCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTACAGACTCAGGGTAGGTaGTCTCCACAGCAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVQTQGR*SPQQTQ Trigger: TTGAGTTTGCTGTGGAGATCACCTACCCTGAGTCTG...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGTCTTTATCACCGGAGCATTTATTGAACATTCACTTATACGTGACCAGGGCGCCCTTGGGCACTaGAAGGTATCCCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQVFITGAFIEHSLIRDQGALGH*KVSLPQ Trigger: CTGGGGAAGGGATACCTTCCAGTGCCCAAGGGCGCC...CTGGTCACGTATAAGTGAATGTTCAATAAATGCTCCGGTGATAAAGACTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCAAGACAGGGTGTAGGTGTGTTCCACCACTGCCCAGATTGCAGTTAGATTGCCTGAGCCTGACTTaGAGGCAACGGAGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFKTGCRCVPPLPRLQLDCLSLT*RQRRFL Trigger: GAGAAACCTCCGTTGCCTCCAAGTCAGGCTCAGGCA...ATCTAACTGCAATCTGGGCAGTGGTGGAACACACCTACACCCTGTCTTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTGTGACCCAGAAGAGGTaGCGCTGCACGCTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTKPEFLILSDTKFFQYIVTQKR*RCTLPH Trigger: GTGCGGCAGCGTGCAGCGGCACCTCTTCTGGGTCAC...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGACGGAGCACAGGATCTaGCCCAGCATGGTGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTVNLETETAGGDSAFLTEHRI*PSMVTQ Trigger: CTGGGTCACCATGCTGGGGCAGATCCTGTGCTCCGT...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGGGAGCCCTGAGGACATaGCCTCAGACTCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTVNLETETAGGDSAFLGALRT*PQTQGR Trigger: CCTACCCTGAGTCTGAGGGCATGTCCTCAGGGCTCC...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAACGCTGTTAAAATTATaGCTACAAACATCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STDYTHGVVQQNLLPAFTTLLKL*LQTSRH Trigger: GTGCCTGGATGTTTGTAGGCATAATTTTAACAGCGT...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR TCA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACATATTATAGTCTGTTGTaGTCTTTCCTTGAGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: STDYTHGVVQQNLLPAFTYYSLL*SFLEPM Trigger: CATTGGCTCAAGGAAAGATCACAACAGACTATAATA...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTCAGAAGAGGTGCCGCTaGACGCTGCCGCACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: DTKPEFLILSDTKFFQYIQKRCR*TLPHLT Trigger: GGTCAAGTGCGGCAGCGTGCAGCGGCACCTCTTCTG...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCTAGTATTTCAAGGACTCTCCACAGAATGGAGACACATGGGCTCTCTATGGTGTTGATGTTATaGGCCAGGAGGTCTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TAASISRTLHRMETHGLSMVLML*ARRSVL Trigger: TAACACAGACCTCCTGGCTCATAACATCAACACCAT...AGAGAGCCCATGTGTCTCCATTCTGTGGAGAGTCCTTGAAATACTAGCTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | ACATTTAACATGGAAACAAACTTTCCAGATCTCAAGACCTTTCTTCTGCAGTGGCTGATTGCCCAGCACTaGTGTGGCACAAGCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TFNMETNFPDLKTFLLQWLIAQH*CGTSRR Trigger: TCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAG...CCACTGCAGAAGAAAGGTCTTGAGATCTGGAAAGTTTGTTTCCATGTTAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR GCA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGGCTGTCTCGAAGAACTaGCTGAGCCTGACTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTVNLETETAGGDSAFLAVSKN*LSLTWR Trigger: CCTCCAAGTCAGGCTCAGGCAGTTCTTCGAGACAGC...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACTCTGCTTGTAGGTTTTaGTATAGTCCAGCCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHSACRF*YSPAIS Trigger: GCTTATGGCTGGACTATACCAAAACCTACAAGCAGA...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR CCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACCATCACTTTGGGTTTTaGATCTACCCGACTATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHHHFGF*IYPTIN Trigger: GTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATG...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACACGGAGCACAGGATCTaGCCCAGCATGGTGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNTEHRI*PSMVTQ Trigger: CTGGGTCACCATGCTGGGGCAGATCCTGTGCTCCGT...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGTCCTTGAATGCTGATTaGCCAGCACTGCTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNTVNLETETAGGDSAFLSLNAD*PALLWH Trigger: GTGCCACAGCAGTGCTGGGCAATCAGCATTCAAGGA...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACTCTGTGCAGCAGTGTTaGGGAGCCCTGAGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNSVQQC*GALRTC Trigger: GCATGTCCTCAGGGCTCCTCAACACTGCTGCACAGA...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR TCA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACTTCCTTGAGCCAATGTaGAGAAAATTCCAAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHFLEPM*RKFQVS Trigger: AGATACTTGGAATTTTCTTCACATTGGCTCAAGGAA...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACGAGCCAGGAGGCCTGTaGTATTCTGTGTGCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNEPGGL*YSVCPR Trigger: CCTTGGGCACACAGAATAGCACAGGCCTCCTGGCTC...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTAAAGGAAAATGTTTCCTaGCTCTGGACTATTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVKENVS*LWTIIV Trigger: GACTATAATAGTCCAGAGGCAGGAAACATTTTCCTT...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR CCA 90 bp | GACACAAAACCAGAATTCCTGATCCTGAGTGATACTAAGTTCTTTCAGTACATTCTGTACTGGATCCACTaGAAGGCGTTCACCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTKPEFLILSDTKFFQYILYWIH*KAFTSE Trigger: CTCGCTGGTGAACGCCTTCCAGTGGATCCAGTACAG...AATGTACTGAAAGAACTTAGTATCACTCAGGATCAGGAATTCTGGTTTTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTAAATGTTTCCTGCCTCTaGACTATTATAGTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVNVSCL*TIIVCC Trigger: ACAACAGACTATAATAGTCCAGAGGCAGGAAACATT...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| 3UTR CAA 72 bp | CAGAGTGAAGATTCCGACTGTATAGACACCATCACTTaGGGTTTTGGATCTACCCGACTATCAACTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QSEDSDCIDTIT*GFGSTRLSTGT Trigger: TGTACCAGTTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTATACAGTCGGAATCTTCACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTCCTCGAACACGTTGCTaGTGCTGCTGTACTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSPRTRC*CCCTGS Trigger: GGATCCAGTACAGCAGCATCAGCAACGTGTTCGAGG...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CAA 72 bp | CAGTGTGAATGCATTATTTCATGGATCAGGAAAATGTaGCCGGAGAGGGTAAATGATGTGTCCAGAGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: QCECIISWIRKM*PERVNDVSRVT Trigger: GGTAACTCTGGACACATCATTTACCCTCTCCGGCAACATTTTCCTGATCCATGAAATAATGCATTCACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CAA 72 bp | GCTTTAACGTCAATGTTTGTAAGCCCGGTGTTTATATaGTGCCTTCTCAGATCAGACTTGATCAACGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALTSMFVSPVFI*CLLRSDLINAV Trigger: AACAGCGTTGATCAAGTCTGATCTGAGAAGGCACAATATAAACACCGGGCTTACAAACATTGACGTTAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGCCGGTGTTTATATTGTaGCTTCTCAGATCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNTVNLETETAGGDSAFLPVFIL*LLRSDL Trigger: CAAGTCTGATCTGAGAAGGCACAATATAAACACCGG...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTCTGTGCTATTCTGTGTaGCCAAGGCAGGCACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSLCYSV*PRQALK Trigger: TTTTAGTGCCTGCCTTGGGCACACAGAATAGCACAG...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| 3UTR CAA 72 bp | CTGACTGGGAATGTACCAGATGTGTTTATGTGTGAATaGCACACTCTTATATGTCTTACAGGAACTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGNVPDVFMCE*HTLICLTGTRH Trigger: GTGTCTAGTTCCTGTAAGACATATAAGAGTGTGCAATTCACACATAAACACATCTGGTACATTCCCAGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| 3UTR CAA 72 bp | AGCCCGGTGTTTATATTGTGCCTTCTCAGATCAGACTaGATCAACGCTGTTAAAATTATGCCTACAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SPVFILCLLRSD*INAVKIMPTNI Trigger: GATGTTTGTAGGCATAATTTTAACAGCGTTGATCAAGTCTGATCTGAGAAGGCACAATATAAACACCGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
||
| 3UTR CAA 72 bp | ACCATTTTGTTGGTTTGTTTGTTTGTTTGTTTGTTTTaGTGGGACAGAACATGTCACAATACACAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TILLVCLFVCLF*WDRTCHNTQVC Trigger: ACACACCTGTGTATTGTGACATGTTCTGTCCCACAAAAACAAACAAACAAACAAACAAACCAACAAAATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR GCA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACAAATGTGGAGATAAATaGTGTTCCGTAAAACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNKCGDK*CSVKHG Trigger: ACCATGTTTTACGGAACAGCATTTATCTCCACATTT...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS CCA 90 bp | GGGCATGGGACGTCCTCCCCGTCGCCCGCGGGCAACAGCCGGGCCTaGGTCTCCTCCTCCGCCGCTATCAGGGCTTGCGGCCCGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHGTSSPSPAGNSRA*VSSSAAIRACGPPW Trigger: CCAGGGCGGGCCGCAAGCCCTGATAGCGGCGGAGGAGGAGACCCAGGCCCGGCTGTTGCCCGCGGGCGACGGGGAGGACGTCCCATGCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS CCA 90 bp | GCTGATTGCCCAGCACTGCTGTGGCACAAGCCGTCGACACCTCCTTaGGTCCAAACCATACCGAGGCGACGGGGGAGGGCAAGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ADCPALLWHKPSTPP*VQTIPRRRGRASPG Trigger: TCCTGGGCTTGCCCTCCCCCGTCGCCTCGGTATGGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS CCA 90 bp | CCTGATTGCCCAGCACTGCTGTGGCACAAGCCGTCGACACCTCCTTaGGTCCAAACCATACCGAGGCGACGGGGGAGGGCAAGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PDCPALLWHKPSTPP*VQTIPRRRGRASPG Trigger: TCCTGGGCTTGCCCTCCCCCGTCGCCTCGGTATGGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAGTGCTGGCTGGGAATACACCCCAGGCTCCCAGGCAGTaGAGGCCGGAGCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLRSCPPHLSVLAGNTPQAPRQ*RPEPSS Trigger: GCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCTG...GGGTGTATTCCCAGCCAGCACTGACAGGTGAGGAGGACAGCTCCTGAGAAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| CDS-3UTR CAA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACCAGGCTCCCAGGCAGTaGAGGCCGGAGCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHQAPRQ*RPEPSS Trigger: GCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCTG...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAGTACAGGCTCCCAGGCAGTaGAGGCCGGAGCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGLCIHTVTLTVTLTWSVQAPRQ*RPEPSS Trigger: GCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCTG...TACTGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS CCA 90 bp | GGCAACGGAGGTTTCTCCTTGAATGCTGATTGCCCAGCACTGCTGTaGCACAAGCCGTCGACACCTCCTTGGGTCCAAACCATACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNGGFSLNADCPALL*HKPSTPPWVQTIPR Trigger: CCTCGGTATGGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGCATTCAAGGAGAAACCTCCGTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGAGGGCAACCTCGGTGTCCTTTCTCAGGAGCTGTCCTCCTCACCTGTCAAAGTCCTCGAACACGTaGCTGATGCTGCTGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GQRATSVSFLRSCPPHLSKSSNT*LMLLYW Trigger: CCAGTACAGCAGCATCAGCAACGTGTTCGAGGACTT...TGACAGGTGAGGAGGACAGCTCCTGAGAAAGGACACCGAGGTTGCCCTCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| CDS-3UTR CAA 90 bp | AGTACTGACTACACACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAACCATGGACAGCCAGTaGATGTGCAGCGGCGACACC | + |
|
Preference number: 5 (lower is better) Translates to: STDYTHGVVQQNLLPAFTTMDSQ*MCSGDT Trigger: GGTGTCGCCGCTGCACATCAACTGGCTGTCCATGGT...TGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTGTGTAGTCAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR CAA 90 bp | CACACGGTGTGGTGCAGCAGAACCTGCTCCCAGCGTTCACAGGACATGTGCAAGATCTGTGCAGCAGTGTaGAGGAGCCCTGAGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: HTVWCSRTCSQRSQDMCKICAAV*RSPEDM Trigger: CATGTCCTCAGGGCTCCTCAACACTGCTGCACAGAT...CTTGCACATGTCCTGTGAACGCTGGGAGCAGGTTCTGCTGCACCACACCGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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| CDS-3UTR CAA 90 bp | ACAAAAACACCTGAGATCTCTTTTACCGCCAGTTTCCAAGCGTGCCCGTGTGTGACCATGGACAGCCAGTaGATGTGCAGCGGCGACACC | + |
|
Preference number: 5 (lower is better) Translates to: TKTPEISFTASFQACPCVTMDSQ*MCSGDT Trigger: GGTGTCGCCGCTGCACATCAACTGGCTGTCCATGGT...CACACACGGGCACGCTTGGAAACTGGCGGTAAAAGAGATCTCAGGTGTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| CDS-3UTR CAA 90 bp | CCAATAATTTTCAAGTGCCTCACACCTCACACAGCTGCCCAAAGACGAAGCCACCTGCCTGAGCCTGACTaGGAGGCAACGGAGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PIIFKCLTPHTAAQRRSHLPEPD*EATEVS Trigger: AGAAACCTCCGTTGCCTCCAAGTCAGGCTCAGGCAG...GTGGCTTCGTCTTTGGGCAGCTGTGTGAGGTGTGAGGCACTTGAAAATTATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR CAA 90 bp | CTCATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAAGCCCGGTGTTTATATaGTGCCTTCTCAGATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LMGLCIHTVTLTVTLTWSSPVFI*CLLRSD Trigger: GTCTGATCTGAGAAGGCACAATATAAACACCGGGCT...TGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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| CDS-3UTR CAA 90 bp | CTCATGGGACTCTGCATTCACACTGTGACTCTAACCGTGACCCTGACATGGTCAATAGACACCATCACTTaGGGTTTTGGATCTACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LMGLCIHTVTLTVTLTWSIDTIT*GFGSTR Trigger: TCGGGTAGATCCAAAACCCAAAGTGATGGTGTCTAT...TGACCATGTCAGGGTCACGGTTAGAGTCACAGTGTGAATGCAGAGTCCCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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| CDS-3UTR CAA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGCTGCCTGAGCCTGACTaGGAGGCAACGGAGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NNTVNLETETAGGDSAFLLPEPD*EATEVS Trigger: AGAAACCTCCGTTGCCTCCAAGTCAGGCTCAGGCAG...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR CAA 90 bp | AACAACACTGTCAATTTAGAAACAGAAACAGCTGGGGGAGACAGTGCATTTTTGAAGTCCTCGAACACGTaGCTGATGCTGCTGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: NNTVNLETETAGGDSAFLKSSNT*LMLLYW Trigger: CCAGTACAGCAGCATCAGCAACGTGTTCGAGGACTT...CAAAAATGCACTGTCTCCCCCAGCTGTTTCTGTTTCTAAATTGACAGTGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR CAA 90 bp | GATCAGTGTGAATGCATTATTTCATGGATCAGGAAAATGTTGCCGGAGAGGGTACCATCACTTTGGGTTTaGGATCTACCCGACTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: DQCECIISWIRKMLPERVPSLWV*DLPDYQ Trigger: TTGATAGTCGGGTAGATCCAAAACCCAAAGTGATGG...TACCCTCTCCGGCAACATTTTCCTGATCCATGAAATAATGCATTCACACTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTAAGTCCTCGAACACGTaGCTGATGCTGCTGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSKSSNT*LMLLYW Trigger: CCAGTACAGCAGCATCAGCAACGTGTTCGAGGACTT...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085635.6 ENSMUST00000192666.2 |
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| CDS-3UTR CAA 90 bp | TACTCCAACAATCTCAATAGACAAAAGCTATGTCACAACATTTACAGATGCAACTGTTGTGATCTTTCCTaGAGCCAATGTGAAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSNNLNRQKLCHNIYRCNCCDLS*SQCEEN Trigger: ATTTTCTTCACATTGGCTCAAGGAAAGATCACAACA...GTTGCATCTGTAAATGTTGTGACATAGCTTTTGTCTATTGAGATTGTTGGAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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| CDS-3UTR CAA 90 bp | ACAAGTTGTAGTACATTAATGTTTACCTGTATGAAGGCAGCACAAAGAAGATCTCTTCTCAGATCAGACTaGATCAACGCTGTTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: TSCSTLMFTCMKAAQRRSLLRSD*INAVKI Trigger: AATTTTAACAGCGTTGATCAAGTCTGATCTGAGAAG...AGATCTTCTTTGTGCTGCCTTCATACAGGTAAACATTAATGTACTACAACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS CAA 90 bp | GGGCAACAGCCGGGCCTGGGTCTCCTCCTCCGCCGCTATCAGGGCTaGCGGCCCGCCCTGGGCTCCCGCGATCAGCGGGCCGAGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GQQPGLGLLLRRYQG*RPALGSRDQRAEPG Trigger: CCCGGGCTCGGCCCGCTGATCGCGGGAGCCCAGGGCGGGCCGCAAGCCCTGATAGCGGCGGAGGAGGAGACCCAGGCCCGGCTGTTGCCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
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| CDS CCA 72 bp | TCCTCCTCCGCCGCTATCAGGGCTTGCGGCCCGCCCTaGGCTCCCGCGATCAGCGGGCCGAGCCCGGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSAAIRACGPP*APAISGPSPGP Trigger: AGGCCCCGGGCTCGGCCCGCTGATCGCGGGAGCCCAGGGCGGGCCGCAAGCCCTGATAGCGGCGGAGGAGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS CCA 72 bp | ACGTCCTCCCCGTCGCCCGCGGGCAACAGCCGGGCCTaGGTCTCCTCCTCCGCCGCTATCAGGGCTTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSPSPAGNSRA*VSSSAAIRACG Trigger: GCCGCAAGCCCTGATAGCGGCGGAGGAGGAGACCCAGGCCCGGCTGTTGCCCGCGGGCGACGGGGAGGACGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS CAA 72 bp | TGCACGCTGCCGCACTTGACCCAGGCTCCCAGGCAGTaGAGGCCGGAGCCCAGCAGCGCCGTGAGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTLPHLTQAPRQ*RPEPSSAVSRR Trigger: CCTGCGGCTCACGGCGCTGCTGGGCTCCGGCCTCAACTGCCTGGGAGCCTGGGTCAAGTGCGGCAGCGTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS GCA 72 bp | ATCTGCCCCAGCATGGTGACCCAGAAGAGGTGCCGCTaGACGCTGCCGCACTTGACCCAGGCTCCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ICPSMVTQKRCR*TLPHLTQAPRQ Trigger: CTGCCTGGGAGCCTGGGTCAAGTGCGGCAGCGTGCAGCGGCACCTCTTCTGGGTCACCATGCTGGGGCAGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS CAA 72 bp | CCCAGCACTGCTGTGGCACAAGCCGTCGACACCTCCTaGGGTCCAAACCATACCGAGGCGACGGGGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSTAVAQAVDTS*GPNHTEATGEG Trigger: GCCCTCCCCCGTCGCCTCGGTATGGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS TCA 72 bp | GGCCTCGCGTGTCCAGCAGCCAGGTGGCCGGGAAGATaGGGGGCACGTAGGCCACCATGTACACCATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GLACPAARWPGR*GARRPPCTPWT Trigger: TGTCCATGGTGTACATGGTGGCCTACGTGCCCCTCATCTTCCCGGCCACCTGGCTGCTGGACACGCGAGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS CCA 72 bp | CCAGCACTGCTGTGGCACAAGCCGTCGACACCTCCTTaGGTCCAAACCATACCGAGGCGACGGGGGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PALLWHKPSTPP*VQTIPRRRGRA Trigger: TGCCCTCCCCCGTCGCCTCGGTATGGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085635.6 ENSMUST00000191946.2 ENSMUST00000192666.2 |
||
| CDS CCA 72 bp | CAACTGCAGTTCCAAGCTGATTGCCCAGCACTGCTGTaGCACAAGCCGTCGACACCTCCTTGGGTCCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: QLQFQADCPALL*HKPSTPPWVQT Trigger: GGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGCTTGGAACTGCAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS GCA 72 bp | AAAACCAACTGCAGTTCCAAGCTGATTGCCCAGCACTaGTGTGGCACAAGCCGTCGACACCTCCTTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTNCSSKLIAQH*CGTSRRHLLGS Trigger: GGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGCTTGGAACTGCAGTTGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
||
| CDS GCA 72 bp | TCTAGACGTTCCAGTCTTTACCTGATTGCCCAGCACTaGTGTGGCACAAGCCGTCGACACCTCCTTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRRSSLYLIAQH*CGTSRRHLLGS Trigger: GGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGGTAAAGACTGGAACGTCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| CDS CCA 72 bp | GGTTTCTCCTTGAATGCTGATTGCCCAGCACTGCTGTaGCACAAGCCGTCGACACCTCCTTGGGTCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: GFSLNADCPALL*HKPSTPPWVQT Trigger: GGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGCATTCAAGGAGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192666.2 |
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| CDS CCA 72 bp | ACGTTCCAGTCTTTACCTGATTGCCCAGCACTGCTGTaGCACAAGCCGTCGACACCTCCTTGGGTCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: TFQSLPDCPALL*HKPSTPPWVQT Trigger: GGTTTGGACCCAAGGAGGTGTCGACGGCTTGTGCCACAGCAGTGCTGGGCAATCAGGTAAAGACTGGAACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191946.2 |
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| CDS GCA 72 bp | TCTGTGTGTGAGCCAGGAGGCCTGTGCTATTCTGTGTaGCCAAGGCAGGCACTAAAACAGGTGGCAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SVCEPGGLCYSV*PRQALKQVATK Trigger: TTTTGTTGCCACCTGTTTTAGTGCCTGCCTTGGGCACACAGAATAGCACAGGCCTCCTGGCTCACACACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085635.6 |
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