Pregenerated sensors for FLRT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047414Ensembl transcript IDs: ENSMUST00000057324.4, ENSMUST00000110117.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATGCCTGTCTGTGATTGACGCATGTGTTGTACTACCTCTCCAGTaGATATGGCAGTGTTTAAGTGAAACCCAGAACCTCCCCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: SCLSVIDACVVLPLQ*IWQCLSETQNLPRV Trigger: GACCCTGGGGAGGTTCTGGGTTTCACTTAAACACTGCCATATGCACTGGAGAGGTAGTACAACACATGCGTCAATCACAGACAGGCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 90 bp | GAGACTCAGGTTTCCAATCTGTTATCACGTAAGGCCAGGGAAGCCTaGAGAGTGATTTCCAAGTTCACAGTCAGAAAGCCAACCTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ETQVSNLLSRKAREA*RVISKFTVRKPTLG Trigger: CCCCAAGGTTGGCTTTCTGACTGTGAACTTGGAAATCACTCTTCAGGCTTCCCTGGCCTTACGTGATAACAGATTGGAAACCTGAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 90 bp | TCTATGGAAATTAACCACTTCACTGTTCAAAGCTGCAGGGGACACTaGAGCTTGAAGTATGCTGATCCAGTGCGGCACCTGCCTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: SMEINHFTVQSCRGH*SLKYADPVRHLPLN Trigger: ATTCAGAGGCAGGTGCCGCACTGGATCAGCATACTTCAAGCTGCAGTGTCCCCTGCAGCTTTGAACAGTGAAGTGGTTAATTTCCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 90 bp | CGCATGTGTTGTACTACCTCTCCAGTGCATATGGCAGTGTTTAAGTaGAACCCAGAACCTCCCCAGGGTCAAATGCATCTTGATGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: RMCCTTSPVHMAVFK*NPEPPQGQMHLDEQ Trigger: TTGCTCATCAAGATGCATTTGACCCTGGGGAGGTTCTGGGTTTCACTTAAACACTGCCATATGCACTGGAGAGGTAGTACAACACATGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 90 bp | AAGTTTGTAGTTAACAAAGTGTGCAACATGGTAGGTCTCCGAGGATaGATGACACAGAATCTTCCAGCCCCTTGCAGTCCCTTGTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KFVVNKVCNMVGLRG*MTQNLPAPCSPLSE Trigger: CTCTGACAAGGGACTGCAAGGGGCTGGAAGATTCTGTGTCATGCATCCTCGGAGACCTACCATGTTGCACACTTTGTTAACTACAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 90 bp | AGGTTTCCAATCTGTTATCACGTAAGGCCAGGGAAGCCTGAAGAGTaGTTTCCAAGTTCACAGTCAGAAAGCCAACCTTGGGGCTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: RFPICYHVRPGKPEE*FPSSQSESQPWGFK Trigger: CTTAAAGCCCCAAGGTTGGCTTTCTGACTGTGAACTTGGAAATCACTCTTCAGGCTTCCCTGGCCTTACGTGATAACAGATTGGAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 90 bp | GCCAACCTTGGGGCTTTAAGGACATTCCAAATCTCTCAGTTTCCTTaGTTTGGTCAAGTAGGCCTAACTTATCTCATGGGAACTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: ANLGALRTFQISQFP*FGQVGLTYLMGTGF Trigger: GAAGCCAGTTCCCATGAGATAAGTTAGGCCTACTTGACCAAATCAAGGAAACTGAGAGATTTGGAATGTCCTTAAAGCCCCAAGGTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 90 bp | GCGAAGTGGTTAATCTGCATCTTAAGGATGATTTGCTCATTCTTCTaGCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTC | + |
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Preference number: 1 (lower is better) Translates to: AKWLICILRMICSFF*LGIGFSLYNPVQYF Trigger: GAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATGCAGATTAACCACTTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 90 bp | GGACACCATACAATATTGTGGGAATCACTCCACTCTCGTTCCTCTTaGGACAAAGAAGACATTTCCACAGTCCCAAATACCACTGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GHHTILWESLHSRSS*DKEDISTVPNTTES Trigger: ACTCTCAGTGGTATTTGGGACTGTGGAAATGTCTTCTTTGTCCCAAGAGGAACGAGAGTGGAGTGATTCCCACAATATTGTATGGTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 90 bp | GTGGTTAATCTGCATCTTAAGGATGATTTGCTCATTCTTCTGCCTTaGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: VVNLHLKDDLLILLP*HRVLIVQPRTVLQQ Trigger: TTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATGCAGATTAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 90 bp | CCTTGGGGCTTTAAGGACATTCCAAATCTCTCAGTTTCCTTGATTTaGTCAAGTAGGCCTAACTTATCTCATGGGAACTGGCTTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: PWGFKDIPNLSVSLI*SSRPNLSHGNWLPH Trigger: ATGAGGAAGCCAGTTCCCATGAGATAAGTTAGGCCTACTTGACCAAATCAAGGAAACTGAGAGATTTGGAATGTCCTTAAAGCCCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 90 bp | ATCCAGCTACCACATAGAGCCCCACATTACTGTCCTGGTTTTAGATaGTGTAACTCTACACTGATCATTGTTCCAGATGGTATTATCCCT | + |
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Preference number: 1 (lower is better) Translates to: IQLPHRAPHYCPGFR*CNSTLIIVPDGIIP Trigger: AGGGATAATACCATCTGGAACAATGATCAGTGTAGAGTTACATCATCTAAAACCAGGACAGTAATGTGGGGCTCTATGTGGTAGCTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 90 bp | GTTTCCTTGATTTGGTCAAGTAGGCCTAACTTATCTCATGGGAACTaGCTTCCTCATGATATTCTAGTTCCTGCATTCAGTCAAACTGGA | + |
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Preference number: 1 (lower is better) Translates to: VSLIWSSRPNLSHGN*LPHDILVPAFSQTG Trigger: TCCAGTTTGACTGAATGCAGGAACTAGAATATCATGAGGAAGCCAGTTCCCATGAGATAAGTTAGGCCTACTTGACCAAATCAAGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 90 bp | GAGCCCCACATTACTGTCCTGGTTTTAGATGATGTAACTCTACACTaGTCATTGTTCCAGATGGTATTATCCCTTTACTGTGTGAACCTA | + |
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Preference number: 1 (lower is better) Translates to: EPHITVLVLDDVTLH*SLFQMVLSLYCVNL Trigger: TAGGTTCACACAGTAAAGGGATAATACCATCTGGAACAATGATCAGTGTAGAGTTACATCATCTAAAACCAGGACAGTAATGTGGGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 90 bp | CCAGCTTGGGCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATaGGCTTTAATATGCAAAAATACACCAAGAATATTTTGTGCAACC | + |
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Preference number: 1 (lower is better) Translates to: PAWAPSQNHWQGMVI*ALICKNTPRIFCAT Trigger: GGTTGCACAAAATATTCTTGGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGCCCAAGCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 90 bp | ATCACCTTCCATTTAACTACCAATAACATCTGTATGATCATGCTTTaGTTTGCCTTTTGCAATGTCCTCTGTGCAAATAGTTACTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: ITFHLTTNNICMIML*FAFCNVLCANSYWA Trigger: TGCCCAGTAACTATTTGCACAGAGGACATTGCAAAAGGCAAAGCAAAGCATGATCATACAGATGTTATTGGTAGTTAAATGGAAGGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 90 bp | TGCATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTaGACACGTATGTGTGTTCTTGAGAGTTTGTTTGTCCACCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: CIWVTFIKCNLRVFM*TRMCVLESLFVHLS Trigger: AGAAAGGTGGACAAACAAACTCTCAAGAACACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGATGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| 3UTR TCA 90 bp | TTCCTCTTGGGACAAAGAAGACATTTCCACAGTCCCAAATACCACTaGGAGTTAAATATGCAATACCAAGAGACAATAATGATTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FLLGQRRHFHSPKYH*ELNMQYQETIMIFF Trigger: GAAGAAAATCATTATTGTCTCTTGGTATTGCATATTTAACTCTCAGTGGTATTTGGGACTGTGGAAATGTCTTCTTTGTCCCAAGAGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CAA 90 bp | GACAGCCTCAACAGCGAAGTGGTTAATCTGCATCTTAAGGATGATTaGCTCATTCTTCTGCCTTGGCATCGGGTTCTCATTGTACAACCC | + |
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Preference number: 2 (lower is better) Translates to: DSLNSEVVNLHLKDD*LILLPWHRVLIVQP Trigger: GGGTTGTACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATGCAGATTAACCACTTCGCTGTTGAGGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CAA 90 bp | AGCCAACCTTGGGGCTTTAAGGACATTCCAAATCTCTCAGTTTCCTaGATTTGGTCAAGTAGGCCTAACTTATCTCATGGGAACTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SQPWGFKDIPNLSVS*IWSSRPNLSHGNWL Trigger: AAGCCAGTTCCCATGAGATAAGTTAGGCCTACTTGACCAAATCAAGGAAACTGAGAGATTTGGAATGTCCTTAAAGCCCCAAGGTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAAAGTCCATTGACACAGTaGAAGAGAACCACCAATATT | + |
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Preference number: 2 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKSPLTQ*KRTTNI Trigger: AATATTGGTGGTTCTCTTTCACTGTGTCAATGGACT...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR GCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGTTCACTGTTCAAAGCTaGAGGGGACACTGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PIDTFTNTPMYVYAWICMFTVQS*RGHCSL Trigger: CAAGCTGCAGTGTCCCCTGCAGCTTTGAACAGTGAA...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR CCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAACTCATTCTTCTGCCTTaGCATCGGGTTCTCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: HLTISSRKGICSDSLNSELILLP*HRVLIV Trigger: TACAATGAGAACCCGATGCCAAGGCAGAAGAATGAG...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CAA 90 bp | GAAAATATAGTATTGCTTTTAACAATACGCACTGATTTGGCCAGCTaGGGCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATGGGC | + |
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Preference number: 2 (lower is better) Translates to: ENIVLLLTIRTDLAS*GAFTESLARNGNMG Trigger: GCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGCCCAAGCTGGCCAAATCAGTGCGTATTGTTAAAAGCAATACTATATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR TCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGGAAACTTTCACTCTCTaGCTTACTCCTTTTCACGGG | + |
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Preference number: 2 (lower is better) Translates to: PIDTFTNTPMYVYAWICMETFTL*LTPFHG Trigger: CCCGTGAAAAGGAGTAAGTCAGAGAGTGAAAGTTTC...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR TCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGCATTATCCTTTCATCTaGCTATCAGCTCTAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PIDTFTNTPMYVYAWICMHYPFI*LSALGK Trigger: CTTTCCTAGAGCTGATAGTCAGATGAAAGGATAATG...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR TCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGCCAATAACATCTGTATaGTCATGCTTTGCTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PIDTFTNTPMYVYAWICMPITSV*SCFALP Trigger: AGGCAAAGCAAAGCATGATCATACAGATGTTATTGG...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR GCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGATCTTAAGGATGATTTaGTCATTCTTCTGCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PIDTFTNTPMYVYAWICMILRMI*SFFCLG Trigger: GCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGAT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAGGCATGGGGCAAAGATaGCATATACAACTTAATTAC | + |
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Preference number: 2 (lower is better) Translates to: APSQNHWQGMVIWALICKGMGQR*HIQLNY Trigger: GTAATTAAGTTGTATATGCCATCTTTGCCCCATGCC...TTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CAA 90 bp | TTATTTTGCTTAGAGAGAGAGAGAGAAAGCAAGAAGAGGATTACATaGATTTCACGGGTCTCTAAAGTGGAGGATGATGTTAAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LFCLERERESKKRIT*ISRVSKVEDDVKGA Trigger: TGCTCCTTTAACATCATCCTCCACTTTAGAGACCCGTGAAATCAATGTAATCCTCTTCTTGCTTTCTCTCTCTCTCTCTAAGCAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCGCCTCAACAGCGAAGTaGTTAATCTGCATCTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: TESLARNGNMGFNMQKYTASTAK*LICILR Trigger: CCTTAAGATGCAGATTAACCACTTCGCTGTTGAGGC...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CAA 90 bp | AAAATTACAAATAGCATTATTTGTCACAAGGGAGGATTTTTACTCTaGTCATGCCTGTCTGTGATTGACGCATGTGTTGTACTACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KITNSIICHKGGFLL*SCLSVIDACVVLPL Trigger: GAGAGGTAGTACAACACATGCGTCAATCACAGACAGGCATGACAAGAGTAAAAATCCTCCCTTGTGACAAATAATGCTATTTGTAATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCGAACTGGCTTCCTCATaGTATTCTAGTTCCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: TESLARNGNMGFNMQKYTELASS*YSSSCI Trigger: AATGCAGGAACTAGAATATCATGAGGAAGCCAGTTC...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 72 bp | ATTAACCACTTCACTGTTCAAAGCTGCAGGGGACACTaGAGCTTGAAGTATGCTGATCCAGTGCGGCACCTG | + |
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Preference number: 3 (lower is better) Translates to: INHFTVQSCRGH*SLKYADPVRHL Trigger: CAGGTGCCGCACTGGATCAGCATACTTCAAGCTGCAGTGTCCCCTGCAGCTTTGAACAGTGAAGTGGTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAAGCTCATTCTTCTGCCTaGGCATCGGGTTCTCATTGT | + |
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Preference number: 3 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKAHSSA*ASGSHC Trigger: ACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGC...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 72 bp | TGTACTACCTCTCCAGTGCATATGGCAGTGTTTAAGTaGAACCCAGAACCTCCCCAGGGTCAAATGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: CTTSPVHMAVFK*NPEPPQGQMHL Trigger: AAGATGCATTTGACCCTGGGGAGGTTCTGGGTTTCACTTAAACACTGCCATATGCACTGGAGAGGTAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGACTGATTTGGCCAGCTaGGGCGCCTTCACAGAATCA | + |
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Preference number: 3 (lower is better) Translates to: PIDTFTNTPMYVYAWICMTDLAS*GAFTES Trigger: TGATTCTGTGAAGGCGCCCAAGCTGGCCAAATCAGT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGAGGGGACACTGCAGCTaGAAGTATGCTGATCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PIDTFTNTPMYVYAWICMRGHCS*KYADPV Trigger: CACTGGATCAGCATACTTCAAGCTGCAGTGTCCCCT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 72 bp | GTTTCCAATCTGTTATCACGTAAGGCCAGGGAAGCCTaGAGAGTGATTTCCAAGTTCACAGTCAGAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: VSNLLSRKAREA*RVISKFTVRKP Trigger: TGGCTTTCTGACTGTGAACTTGGAAATCACTCTTCAGGCTTCCCTGGCCTTACGTGATAACAGATTGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 72 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTaGCATGATTTGGGGAAACTTTCACTCTCTGACTTA | + |
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Preference number: 3 (lower is better) Translates to: LYPTMPSAFSLV*HDLGKLSLSDL Trigger: TAAGTCAGAGAGTGAAAGTTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 72 bp | TCTGTGATTGACGCATGTGTTGTACTACCTCTCCAGTaGATATGGCAGTGTTTAAGTGAAACCCAGAACCTC | + |
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Preference number: 3 (lower is better) Translates to: SVIDACVVLPLQ*IWQCLSETQNL Trigger: GAGGTTCTGGGTTTCACTTAAACACTGCCATATGCACTGGAGAGGTAGTACAACACATGCGTCAATCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 72 bp | CTGCATCTTAAGGATGATTTGCTCATTCTTCTGCCTTaGCATCGGGTTCTCATTGTACAACCCCGTACAGTA | + |
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Preference number: 3 (lower is better) Translates to: LHLKDDLLILLP*HRVLIVQPRTV Trigger: TACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 72 bp | ACATCTATGGAAATTAACCACTTCACTGTTCAAAGCTaGAGGGGACACTGCAGCTTGAAGTATGCTGATCCA | + |
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Preference number: 3 (lower is better) Translates to: TSMEINHFTVQS*RGHCSLKYADP Trigger: TGGATCAGCATACTTCAAGCTGCAGTGTCCCCTGCAGCTTTGAACAGTGAAGTGGTTAATTTCCATAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 72 bp | CTGATTTGGCCAGCTTGGGCGCCTTCACAGAATCATTaGCAAGGAATGGTAATATGGGCTTTAATATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LIWPAWAPSQNH*QGMVIWALICK Trigger: TTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGCCCAAGCTGGCCAAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 72 bp | ACAATATTGTGGGAATCACTCCACTCTCGTTCCTCTTaGGACAAAGAAGACATTTCCACAGTCCCAAATACC | + |
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Preference number: 3 (lower is better) Translates to: TILWESLHSRSS*DKEDISTVPNT Trigger: GGTATTTGGGACTGTGGAAATGTCTTCTTTGTCCCAAGAGGAACGAGAGTGGAGTGATTCCCACAATATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR GCA 72 bp | TTAATCTGCATCTTAAGGATGATTTGCTCATTCTTCTaGCTTGGCATCGGGTTCTCATTGTACAACCCCGTA | + |
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Preference number: 3 (lower is better) Translates to: LICILRMICSFF*LGIGFSLYNPV Trigger: TACGGGGTTGTACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATGCAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR TCA 72 bp | GATCATTGTTCCAGATGGTATTATCCCTTTACTGTGTaGACCTACTTTTACAGAAACCAACAGCCCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: DHCSRWYYPFTV*TYFYRNQQPKP Trigger: GGGTTTGGGCTGTTGGTTTCTGTAAAAGTAGGTTCACACAGTAAAGGGATAATACCATCTGGAACAATGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| 3UTR CCA 72 bp | GGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGTaGTTAATCTGCATCTTAAGGATGATTTGCTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: GKEFVLTASTAK*LICILRMICSF Trigger: GAATGAGCAAATCATCCTTAAGATGCAGATTAACCACTTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CCA 72 bp | ATTTGGTCAAGTAGGCCTAACTTATCTCATGGGAACTaGCTTCCTCATGATATTCTAGTTCCTGCATTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: IWSSRPNLSHGN*LPHDILVPAFS Trigger: ACTGAATGCAGGAACTAGAATATCATGAGGAAGCCAGTTCCCATGAGATAAGTTAGGCCTACTTGACCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGAATCTCTCAGTTTCCTaGATTTGGTCAAGTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PIDTFTNTPMYVYAWICMNLSVS*IWSSRP Trigger: AGGCCTACTTGACCAAATCAAGGAAACTGAGAGATT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGCTGTATGATCATGCTTaGCTTTGCCTTTTGCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: PIDTFTNTPMYVYAWICMLYDHA*LCLLQC Trigger: ACATTGCAAAAGGCAAAGCAAAGCATGATCATACAG...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CCA 72 bp | TTTAAGGACATTCCAAATCTCTCAGTTTCCTTGATTTaGTCAAGTAGGCCTAACTTATCTCATGGGAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FKDIPNLSVSLI*SSRPNLSHGNW Trigger: CCAGTTCCCATGAGATAAGTTAGGCCTACTTGACCAAATCAAGGAAACTGAGAGATTTGGAATGTCCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCCATCTTAAGGATGATTaGCTCATTCTTCTGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TESLARNGNMGFNMQKYTHLKDD*LILLPW Trigger: CCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATG...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR TCA 72 bp | GGACAAAGAAGACATTTCCACAGTCCCAAATACCACTaGGAGTTAAATATGCAATACCAAGAGACAATAATG | + |
|
Preference number: 3 (lower is better) Translates to: GQRRHFHSPKYH*ELNMQYQETIM Trigger: CATTATTGTCTCTTGGTATTGCATATTTAACTCTCAGTGGTATTTGGGACTGTGGAAATGTCTTCTTTGTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCTTAAGGGGAATTTTCTaGCTAGAACTGATCCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: TESLARNGNMGFNMQKYTLRGIF*LELILL Trigger: CAGTAGGATCAGTTCTAGCAAGAAAATTCCCCTTAA...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR TCA 72 bp | ATTACTGTCCTGGTTTTAGATGATGTAACTCTACACTaGTCATTGTTCCAGATGGTATTATCCCTTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: ITVLVLDDVTLH*SLFQMVLSLYC Trigger: ACAGTAAAGGGATAATACCATCTGGAACAATGATCAGTGTAGAGTTACATCATCTAAAACCAGGACAGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAACCCCCTACGAGACTGTaGCCCATTTTCACCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKPPTRL*PIFTHV Trigger: GACATGGGTGAAAATGGGCCACAGTCTCGTAGGGGG...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTGGGGAGCCCATACTGTaGGAAGTCGTCTGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFGEPIL*EVVCSW Trigger: CCATGAGCAGACGACTTCCCACAGTATGGGCTCCCC...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CAA 72 bp | TGGCCCTCCCCAGTACCACTTGGACTCCCAGTAGTGTaGTGGACACCATACAATATTGTGGGAATCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPSPVPLGLPVV*WTPYNIVGITP Trigger: TGGAGTGATTCCCACAATATTGTATGGTGTCCACAACACTACTGGGAGTCCAAGTGGTACTGGGGAGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGAGGCACAGAGCCTCTaGTGGGGCTTGGAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSEEAQSL*WGLEQR Trigger: TCTCTGTTCCAAGCCCCAGCAGAGGCTCTGTGCCTC...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTCTGACAATTCGTTCCTaGACGATGCCCCCTACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFLTIRS*TMPPTR Trigger: TCTCGTAGGGGGCATCGTTCAGGAACGAATTGTCAG...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | GCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAGCCATCCCGCGGACTTaGTCAGGACCTTGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: APSQNHWQGMVIWALICKAIPRT*SGPWHM Trigger: CATGTGCCAAGGTCCTGAGCAAGTCCGCGGGATGGC...TTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAACCCTTTTTGTGCATGTaGCAGCAAAAGACGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKPFLCM*QQKTLS Trigger: GCTCAGCGTCTTTTGCTGGCACATGCACAAAAAGGG...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGATCAGATGCGTACCTaGGAGATCAGGAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSEDQMRT*EIRRWV Trigger: CACCCACCTCCTGATCTCCCAGGTACGCATCTGATC...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTACTTGCTCAGGACCTTaGCACATGAAACCACGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFTCSGP*HMKPRT Trigger: CGTGCGTGGTTTCATGTGCCAAGGTCCTGAGCAAGT...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGCGATGGGGTAGGAGCTaGAGGCACAGAGCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIDTFTNTPMYVYAWICMRWGRS*RHRASA Trigger: AGCAGAGGCTCTGTGCCTCCAGCTCCTACCCCATCG...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGATCCCAAGAGGCACTaGGGTCAAGCTTCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSEDPKRH*GQASLV Trigger: AACGAGAGAAGCTTGACCTCAGTGCCTCTTGGGATC...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCTCCAGCTTGAGGAGCTaGGCGAGAGCAGCCCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTSSLRS*ARAARE Trigger: CTCGCGGGCTGCTCTCGCTCAGCTCCTCAAGCTGGA...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTCCAGCTTGAGGAGCTaGGCGAGAGCAGCCCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMSSLRS*ARAARE Trigger: CTCGCGGGCTGCTCTCGCTCAGCTCCTCAAGCTGGA...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGAGTTGTCGTCCAGGTaGAGTTCTTCCAGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSEELSSR*SSSSLR Trigger: CCTCAAGCTGGAAGAACTCCACCTGGACGACAACTC...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAACAGCAATGCCCTTGTTaGTCAGAAGATTCCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKQQCPC*SEDSHP Trigger: TGGATGGGAATCTTCTGACCAACAAGGGCATTGCTG...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTGAAGTCGTCTGCTCATaGCTAGAAGCAGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFEVVCS*LEAVLL Trigger: CAGCAACACTGCTTCTAGCCATGAGCAGACGACTTC...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTGCAGATGGAGAACTCTaGCATTCTTGGGAAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFADGEL*HSWEGS Trigger: TGAACCTTCCCAAGAATGTCAGAGTTCTCCATCTGC...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTCTGAAAGGCCATGTCTaGTATGACGGCAATTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFLKGHV*YDGNSV Trigger: AACCGAATTGCCGTCATATCAGACATGGCCTTTCAG...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAACTGACTGGACATTGTaGAGCTCTGCAGGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSETDWTL*SSAGKP Trigger: TGGCTTTCCTGCAGAGCTGCACAATGTCCAGTCAGT...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAACTAGATCTGGCACACTaGTGTTGCAGTATCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKLDLAH*CCSISC Trigger: ACATGAGATACTGCAACAGCAGTGTGCCAGATCTAG...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAACAGTGTGCACTGACTaGACATTGTGCAGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSETVCTD*TLCSSA Trigger: TGCAGAGCTGCACAATGTCCAGTCAGTGCACACTGT...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTTCTTGGGAAGGTTCATaGGGAACTCATCCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFSWEGS*GTHPTG Trigger: ACCAGTTGGATGAGTTCCCCATGAACCTTCCCAAGA...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGGCCTCTGCTGGGGCTTaGAACAGAGAGAGTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PIDTFTNTPMYVYAWICMASAGA*NRESRR Trigger: TCTCCTACTCTCTCTGTTCCAAGCCCCAGCAGAGGC...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGGCCCGCGAGATGGTCTaGATGTTGTTTTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PIDTFTNTPMYVYAWICMAREMV*MLFSCR Trigger: TCTGCAGGAAAACAACATTCAGACCATCTCGCGGGC...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTAAGCTTGTGAGGTTCTaGAAGGCCATGTCTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFKLVRF*KAMSDM Trigger: CATATCAGACATGGCCTTTCAGAACCTCACAAGCTT...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGCCATCCCGCGGACTTaGTCAGGACCTTGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCAIPRT*SGPWHM Trigger: CATGTGCCAAGGTCCTGAGCAAGTCCGCGGGATGGC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGGGAGATCAGGAGGTaGGTGGGAGAGCGAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMWEIRR*VGERVP Trigger: CGGAACTCGCTCTCCCACCCACCTCCTGATCTCCCA...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | CTCTATCCTACCATGCCCTCTGCTTTTAGCCTAGTCTGCCATGATTTGGGGAAAGCTGTCAATGGGATATaGTTTATCTGGTTATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYPTMPSAFSLVCHDLGKAVNGI*FIWLSC Trigger: GCAGGATAACCAGATAAACCATATCCCATTGACAGC...TTTCCCCAAATCATGGCAGACTAGGCTAAAAGCAGAGGGCATGGTAGGATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCGATGGGGTAGGAGCTaGAGGCACAGAGCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMRWGRS*RHRASA Trigger: AGCAGAGGCTCTGTGCCTCCAGCTCCTACCCCATCG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGCATCCCAATCAGGGATaGTGGGAAGTTTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PIDTFTNTPMYVYAWICMHPNQG*WEVSMG Trigger: CCCCATCGAAACTTCCCACCATCCCTGATTGGGATG...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTGACAGCCAGCTGACTTaGATCGAAGTATCATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFDSQLT*IEVSLT Trigger: TGTTAATGATACTTCGATTCAAGTCAGCTGGCTGTC...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | GCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAATCCACTCTCAGCTCTTaGAAGTCTACAGGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: APSQNHWQGMVIWALICKSTLSS*KSTGSP Trigger: TGGGCTTCCTGTAGACTTGCAAGAGCTGAGAGTGGA...TTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGAGGCACAGAGCCTCTaGTGGGGCTTGGAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMEAQSL*WGLEQR Trigger: TCTCTGTTCCAAGCCCCAGCAGAGGCTCTGTGCCTC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCGCACAGAGCCTCTGCTaGGGCTTGGAACAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTAQSLC*GLEQRE Trigger: CTCTCTCTGTTCCAAGCCCCAGCAGAGGCTCTGTGC...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGCACAGAGCCTCTGCTaGGGCTTGGAACAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMAQSLC*GLEQRE Trigger: CTCTCTCTGTTCCAAGCCCCAGCAGAGGCTCTGTGC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGGGGAGCCCATACTGTaGGAAGTCGTCTGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMGEPIL*EVVCSW Trigger: CCATGAGCAGACGACTTCCCACAGTATGGGCTCCCC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCCTGCAAGTAGAGCCTaGTCAGATGCGTACCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMPASRA*SDAYLG Trigger: TCCCAGGTACGCATCTGATCAGGCTCTACTTGCAGG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCTTCGTTCCTGAACGATaGCCCCTACGAGACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTFVPER*PLRDCG Trigger: GCCACAGTCTCGTAGGGGGCATCGTTCAGGAACGAA...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTTCGTTCCTGAACGATaGCCCCTACGAGACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMFVPER*PLRDCG Trigger: GCCACAGTCTCGTAGGGGGCATCGTTCAGGAACGAA...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGATCAGATGCGTACCTaGGAGATCAGGAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMDQMRT*EIRRWV Trigger: CACCCACCTCCTGATCTCCCAGGTACGCATCTGATC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTTTCGTAGCTGGTTGTTaGATATATCTAGCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFFVAGC*IYLAFP Trigger: TGGAAAGGCTAGATATATCCAACAACCAGCTACGAA...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGCCTCTGCTGGGGCTTaGAACAGAGAGAGTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCASAGA*NRESRR Trigger: TCTCCTACTCTCTCTGTTCCAAGCCCCAGCAGAGGC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTCCCCCTACGAGACTGTaGCCCATTTTCACCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCPPTRL*PIFTHV Trigger: GACATGGGTGAAAATGGGCCACAGTCTCGTAGGGGG...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| 3UTR CAA 72 bp | ATTTGCTCATTCTTCTGCCTTGGCATCGGGTTCTCATaGTACAACCCCGTACAGTACTTCAGCAACATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICSFFCLGIGFS*YNPVQYFSNIF Trigger: AAAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CAA 72 bp | AACAGCGAAGTGGTTAATCTGCATCTTAAGGATGATTaGCTCATTCTTCTGCCTTGGCATCGGGTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NSEVVNLHLKDD*LILLPWHRVLI Trigger: AATGAGAACCCGATGCCAAGGCAGAAGAATGAGCAAATCATCCTTAAGATGCAGATTAACCACTTCGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CAA 72 bp | TGGGGCTTTAAGGACATTCCAAATCTCTCAGTTTCCTaGATTTGGTCAAGTAGGCCTAACTTATCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGFKDIPNLSVS*IWSSRPNLSHG Trigger: CCCATGAGATAAGTTAGGCCTACTTGACCAAATCAAGGAAACTGAGAGATTTGGAATGTCCTTAAAGCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CAA 72 bp | TACAATATTGTGGGAATCACTCCACTCTCGTTCCTCTaGGGACAAAGAAGACATTTCCACAGTCCCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: YNIVGITPLSFL*GQRRHFHSPKY Trigger: GTATTTGGGACTGTGGAAATGTCTTCTTTGTCCCAAGAGGAACGAGAGTGGAGTGATTCCCACAATATTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGATCCCAAGAGGCACTaGGGTCAAGCTTCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCDPKRH*GQASLV Trigger: AACGAGAGAAGCTTGACCTCAGTGCCTCTTGGGATC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTCTGACAATTCGTTCCTaGACGATGCCCCCTACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCLTIRS*TMPPTR Trigger: TCTCGTAGGGGGCATCGTTCAGGAACGAATTGTCAG...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGCCAGCAAAAGACGCTaGGCAAGACAACGAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCASKRR*ARQRAQ Trigger: TTGTGCTCGTTGTCTTGCTCAGCGTCTTTTGCTGGC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGAGTTGTCGTCCAGGTaGAGTTCTTCCAGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMELSSR*SSSSLR Trigger: CCTCAAGCTGGAAGAACTCCACCTGGACGACAACTC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGACTTGCTCAGGACCTTaGCACATGAAACCACGCACG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMTCSGP*HMKPRT Trigger: CGTGCGTGGTTTCATGTGCCAAGGTCCTGAGCAAGT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTCATCCCAATCAGGGATaGTGGGAAGTTTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCHPNQG*WEVSMG Trigger: CCCCATCGAAACTTCCCACCATCCCTGATTGGGATG...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGATTAATGCCCCCATTTaGGGTATAAATGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIDTFTNTPMYVYAWICMINAPI*GINGLQ Trigger: CTGCAGCCCATTTATACCCCAAATGGGGGCATTAAT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCTTGAGCTTGGTGAGATaGCTGAAGGTACCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTLSLVR*LKVPSA Trigger: TGCTGAGGGTACCTTCAGTCATCTCACCAAGCTCAA...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTTTGAGCTTGGTGAGATaGCTGAAGGTACCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCLSLVR*LKVPSA Trigger: TGCTGAGGGTACCTTCAGTCATCTCACCAAGCTCAA...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGGTTATTCCGCGCAGTaGGTTGTTTCAGGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCGYSAQ*VVSGWR Trigger: TCTCCAACCTGAAACAACTCACTGCGCGGAATAACC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGGTTATTCCGCGCAGTaGGTTGTTTCAGGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMGYSAQ*VVSGWR Trigger: TCTCCAACCTGAAACAACTCACTGCGCGGAATAACC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTACTGACTGGACATTGTaGAGCTCTGCAGGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCTDWTL*SSAGKP Trigger: TGGCTTTCCTGCAGAGCTGCACAATGTCCAGTCAGT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCCCTTTTTGTGCATGTaGCAGCAAAAGACGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMPFLCM*QQKTLS Trigger: GCTCAGCGTCTTTTGCTGGCACATGCACAAAAAGGG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGACAGTGTGCACTGACTaGACATTGTGCAGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMTVCTD*TLCSSA Trigger: TGCAGAGCTGCACAATGTCCAGTCAGTGCACACTGT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCGAGCAGCCCGCGAGATaGTCTGAATGTTGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTEQPAR*SECCFP Trigger: AGGAAAACAACATTCAGACCATCTCGCGGGCTGCTC...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGAGCAGCCCGCGAGATaGTCTGAATGTTGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCEQPAR*SECCFP Trigger: AGGAAAACAACATTCAGACCATCTCGCGGGCTGCTC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGGCCAGGAGTCGTGGTaGGACAAGACAAAAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMGQESW*DKTKDS Trigger: TGAATCTTTTGTCTTGTCCCACCACGACTCCTGGCC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGGCCAGGAGTCGTGGTaGGACAAGACAAAAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCGQESW*DKTKDS Trigger: TGAATCTTTTGTCTTGTCCCACCACGACTCCTGGCC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGAAGTCGTCTGCTCATaGCTAGAAGCAGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCEVVCS*LEAVLL Trigger: CAGCAACACTGCTTCTAGCCATGAGCAGACGACTTC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGCAGATGGAGAACTCTaGCATTCTTGGGAAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMADGEL*HSWEGS Trigger: TGAACCTTCCCAAGAATGTCAGAGTTCTCCATCTGC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTCTGAAAGGCCATGTCTaGTATGACGGCAATTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCLKGHV*YDGNSV Trigger: AACCGAATTGCCGTCATATCAGACATGGCCTTTCAG...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGTCTCCTTTAAGGAGCTaGTCGTTATTTAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PIDTFTNTPMYVYAWICMSPLRS*SLFKET Trigger: TGTCTCCTTAAATAACGATCAGCTCCTTAAAGGAGA...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTAGGTACCCTCAGCAATaGCCTTGTTGGTCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCRYPQQ*PCWSED Trigger: ATCTTCTGACCAACAAGGGCATTGCTGAGGGTACCT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTCTGGCACACTGCTGTTaGAGTATCTCATGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCLAHCC*SISCCW Trigger: CCAACAACATGAGATACTGCAACAGCAGTGTGCCAG...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCTGGCACACTGCTGTTaGAGTATCTCATGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMLAHCC*SISCCW Trigger: CCAACAACATGAGATACTGCAACAGCAGTGTGCCAG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTCTTGGGAAGGTTCATaGGGAACTCATCCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMSWEGS*GTHPTG Trigger: ACCAGTTGGATGAGTTCCCCATGAACCTTCCCAAGA...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAATTGTTTTCCTGCAGATaGAGAACTCTGACATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: APSQNHWQGMVIWALICKLFSCR*RTLTFL Trigger: CAAGAATGTCAGAGTTCTCCATCTGCAGGAAAACAA...TTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCAGCAATGCCCTTGTTaGTCAGAAGATTCCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMQQCPC*SEDSHP Trigger: TGGATGGGAATCTTCTGACCAACAAGGGCATTGCTG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGTATCATTAACAAAGTaGATGGAAAGTTGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLTISSRKGICSDSLNSEVSLTK*MESWIL Trigger: AAGGATCCAACTTTCCATCCACTTTGTTAATGATAC...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGAAGCTTGTGAGGTTCTaGAAGGCCATGTCTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMKLVRF*KAMSDM Trigger: CATATCAGACATGGCCTTTCAGAACCTCACAAGCTT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTAGAGAGACAGCCAGCTaGCTTGAATCGAAGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCRETAS*LESKYH Trigger: ATGATACTTCGATTCAAGTCAGCTGGCTGTCTCTCT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCGACATTGTGCAGCTCTaGAGGAAAGCCAGCATTATT | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTDIVQL*RKASII Trigger: AATAATGCTGGCTTTCCTGCAGAGCTGCACAATGTC...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGACATTGTGCAGCTCTaGAGGAAAGCCAGCATTATT | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCDIVQL*RKASII Trigger: AATAATGCTGGCTTTCCTGCAGAGCTGCACAATGTC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCACCAAGCTCAGGTGTTaGTTCTCACCACTGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTTKLRC*FSPLTI Trigger: AATTGTCAGTGGTGAGAAGCAACACCTGAGCTTGGT...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGACCAAGCTCAGGTGTTaGTTCTCACCACTGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMTKLRC*FSPLTI Trigger: AATTGTCAGTGGTGAGAAGCAACACCTGAGCTTGGT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCTAGATCTGGCACACTaGTGTTGCAGTATCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMLDLAH*CCSISC Trigger: ACATGAGATACTGCAACAGCAGTGTGCCAGATCTAG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGATTAATGCCCCCATTTaGGGTATAAATGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMINAPI*GINGLQ Trigger: CTGCAGCCCATTTATACCCCAAATGGGGGCATTAAT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| 3UTR CAA 72 bp | CCCAGGGTCAAATGCATCTTGATGAGCAAAAATGTATaGGTGATCACCTTCCATTTAACTACCAATAACATC | + |
|
Preference number: 4 (lower is better) Translates to: PRVKCILMSKNV*VITFHLTTNNI Trigger: GATGTTATTGGTAGTTAAATGGAAGGTGATCACCAATACATTTTTGCTCATCAAGATGCATTTGACCCTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| 3UTR CAA 72 bp | AATAGCATTATTTGTCACAAGGGAGGATTTTTACTCTaGTCATGCCTGTCTGTGATTGACGCATGTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSIICHKGGFLL*SCLSVIDACVV Trigger: TACAACACATGCGTCAATCACAGACAGGCATGACAAGAGTAAAAATCCTCCCTTGTGACAAATAATGCTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGACAGCCAGCTGACTTaGATCGAAGTATCATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMDSQLT*IEVSLT Trigger: TGTTAATGATACTTCGATTCAAGTCAGCTGGCTGTC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGCTGTCAATGGGATATaGTTTATCTGGTTATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMAVNGI*FIWLSC Trigger: GCAGGATAACCAGATAAACCATATCCCATTGACAGC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCTGCGAAGGCTGTCAATaGGATATGGTTTATCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TESLARNGNMGFNMQKYTCEGCQ*DMVYLV Trigger: AACCAGATAAACCATATCCCATTGACAGCCTTCGCA...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGCGAAGGCTGTCAATaGGATATGGTTTATCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMCEGCQ*DMVYLV Trigger: AACCAGATAAACCATATCCCATTGACAGCCTTCGCA...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTTCTCCTTTAAGGAGCTaGTCGTTATTTAAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCSPLRS*SLFKET Trigger: TGTCTCCTTAAATAACGATCAGCTCCTTAAAGGAGA...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTTTCGTAGCTGGTTGTTaGATATATCTAGCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCFVAGC*IYLAFP Trigger: TGGAAAGGCTAGATATATCCAACAACCAGCTACGAA...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGTATCATTAACAAAGTaGATGGAAAGTTGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMVSLTK*MESWIL Trigger: AAGGATCCAACTTTCCATCCACTTTGTTAATGATAC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | GTGGAGGTAGAGTACGGTTACGCCCTCCGGGATCCCAAGAGGCACTaGGGTCAAGCTTCTCTCGTTACAGTAGACAAAGTTCCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VEVEYGYALRDPKRH*GQASLVTVDKVPVT Trigger: TGTGACAGGAACTTTGTCTACTGTAACGAGAGAAGCTTGACCTCAGTGCCTCTTGGGATCCCGGAGGGCGTAACCGTACTCTACCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | CTGTCAATGGGATATGGTTTATCTGGTTATCCTGCAAGTAGAGCCTaGTCAGATGCGTACCTGGGAGATCAGGAGGTGGGTGGGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSMGYGLSGYPASRA*SDAYLGDQEVGGRA Trigger: CGCTCTCCCACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCTCTACTTGCAGGATAACCAGATAAACCATATCCCATTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS CCA 90 bp | CTGCAAGTAGAGCCTGATCAGATGCGTACCTGGGAGATCAGGAGGTaGGTGGGAGAGCGAGTTCCGGACTATAGAAAATTCCTTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVEPDQMRTWEIRR*VGERVPDYRKFLEL Trigger: AAGCTCAAGGAATTTTCTATAGTCCGGAACTCGCTCTCCCACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCTCTACTTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS CCA 90 bp | GTTTATCTGGTTATCCTGCAAGTAGAGCCTGATCAGATGCGTACCTaGGAGATCAGGAGGTGGGTGGGAGAGCGAGTTCCGGACTATAGA | + |
|
Preference number: 5 (lower is better) Translates to: VYLVILQVEPDQMRT*EIRRWVGERVPDYR Trigger: TCTATAGTCCGGAACTCGCTCTCCCACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCTCTACTTGCAGGATAACCAGATAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | TTAACCAAGCTCAGGTGTTGCTTCTCACCACTGACAATTCGTTCCTaGACGATGCCCCCTACGAGACTGTGGCCCATTTTCACCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTKLRCCFSPLTIRS*TMPPTRLWPIFTHV Trigger: GACATGGGTGAAAATGGGCCACAGTCTCGTAGGGGGCATCGTTCAGGAACGAATTGTCAGTGGTGAGAAGCAACACCTGAGCTTGGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAAGCCATCCCGCGGACTaGCTCAGGACCTTGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: HLTISSRKGICSDSLNSESHPAD*LRTLAH Trigger: ATGTGCCAAGGTCCTGAGCAAGTCCGCGGGATGGCT...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS TCA 90 bp | CCCGCGAGATGGTCTGAATGTTGTTTTCCTGCAGATGGAGAACTCTaGCATTCTTGGGAAGGTTCATGGGGAACTCATCCAACTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PARWSECCFPADGEL*HSWEGSWGTHPTGC Trigger: GCAACCAGTTGGATGAGTTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCTCCATCTGCAGGAAAACAACATTCAGACCATCTCGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | AGCTCTTGCAAGTCTACAGGAAGCCCAACAGGCACGCTACTCAGGTaGTTCTTCGATAAAAACAACAGTTTGAGGCTAATCGCCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCKSTGSPTGTLLR*FFDKNNSLRLIASR Trigger: CCGGGAGGCGATTAGCCTCAAACTGTTGTTTTTATCGAAGAATCACCTGAGTAGCGTGCCTGTTGGGCTTCCTGTAGACTTGCAAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | CACGATCAGGCGCTCCAAGCTTGTGAGGTTCTGAAAGGCCATGTCTaGTATGACGGCAATTCGGTTTTCATCCACTCTCAGCTCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HDQALQACEVLKGHV*YDGNSVFIHSQLLQ Trigger: TTGCAAGAGCTGAGAGTGGATGAAAACCGAATTGCCGTCATATCAGACATGGCCTTTCAGAACCTCACAAGCTTGGAGCGCCTGATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | AGAAGATTCCCATCCACGATCAGGCGCTCCAAGCTTGTGAGGTTCTaGAAGGCCATGTCTGATATGACGGCAATTCGGTTTTCATCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RRFPSTIRRSKLVRF*KAMSDMTAIRFSST Trigger: AGTGGATGAAAACCGAATTGCCGTCATATCAGACATGGCCTTTCAGAACCTCACAAGCTTGGAGCGCCTGATCGTGGATGGGAATCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAGACTTGCTCAGGACCTaGGCACATGAAACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLTISSRKGICSDSLNSEDLLRT*AHETTH Trigger: GTGCGTGGTTTCATGTGCCAAGGTCCTGAGCAAGTC...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS TCA 90 bp | GGGGAACTCATCCAACTGGTTGCCATAAAGGTAGACAGTGTGCACTaGCTGGACATTGTGCAGCTCTGCAGGAAAGCCAGCATTATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GELIQLVAIKVDSVH*LDIVQLCRKASIIN Trigger: ATTAATAATGCTGGCTTTCCTGCAGAGCTGCACAATGTCCAGTCAGTGCACACTGTCTACCTTTATGGCAACCAGTTGGATGAGTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS TCA 90 bp | GAGAGCGAGTTCCGGACTATAGAAAATTCCTTGAGCTTGGTGAGATaGCTGAAGGTACCCTCAGCAATGCCCTTGTTGGTCAGAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: ESEFRTIENSLSLVR*LKVPSAMPLLVRRF Trigger: GAATCTTCTGACCAACAAGGGCATTGCTGAGGGTACCTTCAGTCATCTCACCAAGCTCAAGGAATTTTCTATAGTCCGGAACTCGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGACTATCAGCTCTAGGAAAGGAATTTGTTCTGACAGCCTCAACAGCGAAATCCACTCTCAGCTCTaGCAAGTCTACAGGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLTISSRKGICSDSLNSEIHSQL*QVYRKP Trigger: GGGCTTCCTGTAGACTTGCAAGAGCTGAGAGTGGAT...TTCGCTGTTGAGGCTGTCAGAACAAATTCCTTTCCTAGAGCTGATAGTCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGTTCCGTCGGCCCCGGTaGTATTTCCACTTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PIDTFTNTPMYVYAWICMFRRPR*YFHFWE Trigger: CTCCCAGAAGTGGAAATACAACCGGGGCCGACGGAA...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS CCA 90 bp | CATGTTGTTGGGGATGTGGCAGTCTGTGTAATTAATGCCCCCATTTaGGGTATAAATGGGCTGCAGTCTGAAATCTCCTTTAAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HVVGDVAVCVINAPI*GINGLQSEISFKEL Trigger: CAGCTCCTTAAAGGAGATTTCAGACTGCAGCCCATTTATACCCCAAATGGGGGCATTAATTACACAGACTGCCACATCCCCAACAACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTAGAACTCTGACATTCTaGGGAAGGTTCATGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFRTLTF*GRFMGN Trigger: GTTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCT...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTTCTGGCACACTGCTGTaGCAGTATCTCATGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFSGTLL*QYLMLL Trigger: CAACAACATGAGATACTGCAACAGCAGTGTGCCAGA...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTAGCCATCCCGCGGACTaGCTCAGGACCTTGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCSHPAD*LRTLAH Trigger: ATGTGCCAAGGTCCTGAGCAAGTCCGCGGGATGGCT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | GCGCCTTCACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAGGCAGGCCAGGAGTTTaGACACTTGTAAGTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: APSQNHWQGMVIWALICKGRPGV*TLVSRV Trigger: GACTCTACTTACAAGTGTCAAAACTCCTGGCCTGCC...TTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGTGAAGGCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGATTCCGCGCAGTGAGTaGTTTCAGGTTGGAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PIDTFTNTPMYVYAWICMIPRSE*FQVGEM Trigger: CATCTCTCCAACCTGAAACAACTCACTGCGCGGAAT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTTCCGTCGGCCCCGGTaGTATTTCCACTTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMFRRPR*YFHFWE Trigger: CTCCCAGAAGTGGAAATACAACCGGGGCCGACGGAA...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCCAGCTTACGGAGGTTaGCGAAGGCTGTCAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMPAYGG*RRLSMG Trigger: TCCCATTGACAGCCTTCGCAAACCTCCGTAAGCTGG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTCCAGCTTACGGAGGTTaGCGAAGGCTGTCAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCPAYGG*RRLSMG Trigger: TCCCATTGACAGCCTTCGCAAACCTCCGTAAGCTGG...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGGCATCGGGTTCTCATTGTACAACCCCGTACAGTACTTCAGCAACATTTTAACATTCGTAGCTGGTaGTTGGATATATCTAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWHRVLIVQPRTVLQQHFNIRSW*LDISSL Trigger: AAGGCTAGATATATCCAACAACCAGCTACGAATGTT...AAAATGTTGCTGAAGTACTGTACGGGGTTGTACAATGAGAACCCGATGCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGGACTTGCTCAGGACCTaGGCACATGAAACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMDLLRT*AHETTH Trigger: GTGCGTGGTTTCATGTGCCAAGGTCCTGAGCAAGTC...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGATCCACTCTCAGCTCTaGCAAGTCTACAGGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMIHSQL*QVYRKP Trigger: GGGCTTCCTGTAGACTTGCAAGAGCTGAGAGTGGAT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | CCCATAGACACCTTTACAAACACTCCAATGTATGTGTATGCATGGATTTGCATGATGAAACCACGCACGTaGAGAGAAGAAGGGATATAC | + |
|
Preference number: 5 (lower is better) Translates to: PIDTFTNTPMYVYAWICMMKPRT*REEGIY Trigger: GTATATCCCTTCTTCTCTCAACGTGCGTGGTTTCAT...CATGCAAATCCATGCATACACATACATTGGAGTGTTTGTAAAGGTGTCTATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
||
| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTGGCAGGCCAGGAGTTTaGACACTTGTAAGTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCGRPGV*TLVSRV Trigger: GACTCTACTTACAAGTGTCAAAACTCCTGGCCTGCC...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGATTCCGCGCAGTGAGTaGTTTCAGGTTGGAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMIPRSE*FQVGEM Trigger: CATCTCTCCAACCTGAAACAACTCACTGCGCGGAAT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCCAGTATCTCATGTTGTaGGGGATGTGGCAGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TESLARNGNMGFNMQKYTQYLML*GMWQSV Trigger: CACAGACTGCCACATCCCCAACAACATGAGATACTG...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGCAGTATCTCATGTTGTaGGGGATGTGGCAGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMQYLML*GMWQSV Trigger: CACAGACTGCCACATCCCCAACAACATGAGATACTG...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTAGAACTCTGACATTCTaGGGAAGGTTCATGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCRTLTF*GRFMGN Trigger: GTTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS-3UTR CAA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCGATAAAAACAACAGTTaGAGGCTAATCGCCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: TESLARNGNMGFNMQKYTDKNNS*RLIASR Trigger: CCGGGAGGCGATTAGCCTCAAACTGTTGTTTTTATC...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTTCTGGCACACTGCTGTaGCAGTATCTCATGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCSGTLL*QYLMLL Trigger: CAACAACATGAGATACTGCAACAGCAGTGTGCCAGA...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTATGAAACCACGCACGTaGAGAGAAGAAGGGATATAC | + |
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Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCMKPRT*REEGIY Trigger: GTATATCCCTTCTTCTCTCAACGTGCGTGGTTTCAT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS-3UTR CAA 90 bp | ACAGAATCATTGGCAAGGAATGGTAATATGGGCTTTAATATGCAAAAATACACCAGACAGCCAGCTGACTaGAATCGAAGTATCATTAAC | + |
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Preference number: 5 (lower is better) Translates to: TESLARNGNMGFNMQKYTRQPAD*NRSIIN Trigger: GTTAATGATACTTCGATTCAAGTCAGCTGGCTGTCT...GGTGTATTTTTGCATATTAAAGCCCATATTACCATTCCTTGCCAATGATTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057324.4 |
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| CDS-3UTR CAA 90 bp | TGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGTGTAGACAGCCAGCTGACTaGAATCGAAGTATCATTAAC | + |
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Preference number: 5 (lower is better) Translates to: WVTFIKCNLRVFMCTRMCRQPAD*NRSIIN Trigger: GTTAATGATACTTCGATTCAAGTCAGCTGGCTGTCT...ACACATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS-3UTR CAA 90 bp | ATCTGGGTAACATTTATCAAATGTAATTTGCGTGTCTTTATGTGCACACGTATGAACATTCGTAGCTGGTaGTTGGATATATCTAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: IWVTFIKCNLRVFMCTRMNIRSW*LDISSL Trigger: AAGGCTAGATATATCCAACAACCAGCTACGAATGTT...CATACGTGTGCACATAAAGACACGCAAATTACATTTGATAAATGTTACCCAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | ATATGGAGTTGTCGTCCAGGTGGAGTTCTTCCAGCTTaGGGAGCTGAGCGAGAGCAGCCCGCGAGATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IWSCRPGGVLPA*GAEREQPARWS Trigger: AGACCATCTCGCGGGCTGCTCTCGCTCAGCTCCTCAAGCTGGAAGAACTCCACCTGGACGACAACTCCATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CCA 72 bp | GTTATCCTGCAAGTAGAGCCTGATCAGATGCGTACCTaGGAGATCAGGAGGTGGGTGGGAGAGCGAGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: VILQVEPDQMRT*EIRRWVGERVP Trigger: CGGAACTCGCTCTCCCACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCTCTACTTGCAGGATAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | CCTCTGCTGGGGCTTGGAACAGAGAGAGTAGGAGACTaGGTTGTTGGAGAAACGGTACTTGGAGCTGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: PLLGLGTERVGD*VVGETVLGAGV Trigger: TACCCCAGCTCCAAGTACCGTTTCTCCAACAACTCAGTCTCCTACTCTCTCTGTTCCAAGCCCCAGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS GCA 72 bp | AGCAGAAAAGGGGAGCCCATACTGTGGGAAGTCGTCTaGTCATGGCTAGAAGCAGTGTTGCTGCCGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SRKGEPILWEVV*SWLEAVLLPLF Trigger: GAACAACGGCAGCAACACTGCTTCTAGCCATGAGCAGACGACTTCCCACAGTATGGGCTCCCCTTTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CCA 72 bp | GAGCCTGATCAGATGCGTACCTGGGAGATCAGGAGGTaGGTGGGAGAGCGAGTTCCGGACTATAGAAAATTC | + |
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Preference number: 6 (lower is better) Translates to: EPDQMRTWEIRR*VGERVPDYRKF Trigger: GAATTTTCTATAGTCCGGAACTCGCTCTCCCACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CCA 72 bp | ATCAAGCCTGCGAGCAGAAAAGGGGAGCCCATACTGTaGGAAGTCGTCTGCTCATGGCTAGAAGCAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IKPASRKGEPIL*EVVCSWLEAVL Trigger: CAACACTGCTTCTAGCCATGAGCAGACGACTTCCCACAGTATGGGCTCCCCTTTTCTGCTCGCAGGCTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | GAGTACGGTTACGCCCTCCGGGATCCCAAGAGGCACTaGGGTCAAGCTTCTCTCGTTACAGTAGACAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: EYGYALRDPKRH*GQASLVTVDKV Trigger: AACTTTGTCTACTGTAACGAGAGAAGCTTGACCTCAGTGCCTCTTGGGATCCCGGAGGGCGTAACCGTACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | TGGTGGGACAAGACAAAAGATTCATATTCAACTCCCTaGCAGCCATCCCGCGGACTTGCTCAGGACCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: WWDKTKDSYSTP*QPSRGLAQDLG Trigger: GCCAAGGTCCTGAGCAAGTCCGCGGGATGGCTGTCAGGGAGTTGAATATGAATCTTTTGTCTTGTCCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | CTCAGGTGTTGCTTCTCACCACTGACAATTCGTTCCTaGACGATGCCCCCTACGAGACTGTGGCCCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: LRCCFSPLTIRS*TMPPTRLWPIF Trigger: GAAAATGGGCCACAGTCTCGTAGGGGGCATCGTTCAGGAACGAATTGTCAGTGGTGAGAAGCAACACCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CCA 72 bp | GGGGCTTGGAACAGAGAGAGTAGGAGACTGAGTTGTTaGAGAAACGGTACTTGGAGCTGGGGTAAAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GAWNRESRRLSC*RNGTWSWGKDR Trigger: CCTGTCTTTACCCCAGCTCCAAGTACCGTTTCTCCAACAACTCAGTCTCCTACTCTCTCTGTTCCAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | CCATCCACGATCAGGCGCTCCAAGCTTGTGAGGTTCTaGAAGGCCATGTCTGATATGACGGCAATTCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PSTIRRSKLVRF*KAMSDMTAIRF Trigger: AAACCGAATTGCCGTCATATCAGACATGGCCTTTCAGAACCTCACAAGCTTGGAGCGCCTGATCGTGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS GCA 72 bp | ATGACGGCAATTCGGTTTTCATCCACTCTCAGCTCTTaGAAGTCTACAGGAAGCCCAACAGGCACGCTACTC | + |
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Preference number: 6 (lower is better) Translates to: MTAIRFSSTLSS*KSTGSPTGTLL Trigger: GAGTAGCGTGCCTGTTGGGCTTCCTGTAGACTTGCAAGAGCTGAGAGTGGATGAAAACCGAATTGCCGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | GCGCTCCAAGCTTGTGAGGTTCTGAAAGGCCATGTCTaGTATGACGGCAATTCGGTTTTCATCCACTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALQACEVLKGHV*YDGNSVFIHSQ Trigger: CTGAGAGTGGATGAAAACCGAATTGCCGTCATATCAGACATGGCCTTTCAGAACCTCACAAGCTTGGAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | GGATATGGTTTATCTGGTTATCCTGCAAGTAGAGCCTaGTCAGATGCGTACCTGGGAGATCAGGAGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GYGLSGYPASRA*SDAYLGDQEVG Trigger: ACCCACCTCCTGATCTCCCAGGTACGCATCTGATCAGGCTCTACTTGCAGGATAACCAGATAAACCATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | CCTCCGAACAGATGGTATCTTCCACAGTGCGGTAGTTaGACGCATCCAGCGGCACTAAACAAATCCTATACG | + |
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Preference number: 6 (lower is better) Translates to: PPNRWYLPQCGS*THPAALNKSYT Trigger: CGTATAGGATTTGTTTAGTGCCGCTGGATGCGTTCAACTACCGCACTGTGGAAGATACCATCTGTTCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CAA 72 bp | TATGACGGCAATTCGGTTTTCATCCACTCTCAGCTCTaGCAAGTCTACAGGAAGCCCAACAGGCACGCTACT | + |
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Preference number: 6 (lower is better) Translates to: YDGNSVFIHSQL*QVYRKPNRHAT Trigger: AGTAGCGTGCCTGTTGGGCTTCCTGTAGACTTGCAAGAGCTGAGAGTGGATGAAAACCGAATTGCCGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CAA 72 bp | ACTTGCTCAGGACCTTGGCACATGAAACCACGCACGTaGAGAGAAGAAGGGATATACTTGAGCCATTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TCSGPWHMKPRT*REEGIYLSHSV Trigger: CACAGAATGGCTCAAGTATATCCCTTCTTCTCTCAACGTGCGTGGTTTCATGTGCCAAGGTCCTGAGCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | TTCCGGACTATAGAAAATTCCTTGAGCTTGGTGAGATaGCTGAAGGTACCCTCAGCAATGCCCTTGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FRTIENSLSLVR*LKVPSAMPLLV Trigger: GACCAACAAGGGCATTGCTGAGGGTACCTTCAGTCATCTCACCAAGCTCAAGGAATTTTCTATAGTCCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CCA 72 bp | GGGGATGTGGCAGTCTGTGTAATTAATGCCCCCATTTaGGGTATAAATGGGCTGCAGTCTGAAATCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GDVAVCVINAPI*GINGLQSEISF Trigger: AAAGGAGATTTCAGACTGCAGCCCATTTATACCCCAAATGGGGGCATTAATTACACAGACTGCCACATCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | TGGTCTGAATGTTGTTTTCCTGCAGATGGAGAACTCTaGCATTCTTGGGAAGGTTCATGGGGAACTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: WSECCFPADGEL*HSWEGSWGTHP Trigger: TGGATGAGTTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCTCCATCTGCAGGAAAACAACATTCAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CAA 72 bp | ATGTTGTTTTCCTGCAGATGGAGAACTCTGACATTCTaGGGAAGGTTCATGGGGAACTCATCCAACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: MLFSCRWRTLTF*GRFMGNSSNWL Trigger: CAACCAGTTGGATGAGTTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCTCCATCTGCAGGAAAACAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS TCA 72 bp | AAGTCTACAGGAAGCCCAACAGGCACGCTACTCAGGTaGTTCTTCGATAAAAACAACAGTTTGAGGCTAATC | + |
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Preference number: 6 (lower is better) Translates to: KSTGSPTGTLLR*FFDKNNSLRLI Trigger: GATTAGCCTCAAACTGTTGTTTTTATCGAAGAATCACCTGAGTAGCGTGCCTGTTGGGCTTCCTGTAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CAA 72 bp | GTAGGCCATCACAGTAAAGAGAGACAGCCAGCTGACTaGAATCGAAGTATCATTAACAAAGTGGATGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VGHHSKERQPAD*NRSIINKVDGK Trigger: CTTTCCATCCACTTTGTTAATGATACTTCGATTCAAGTCAGCTGGCTGTCTCTCTTTACTGTGATGGCCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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| CDS CAA 90 bp | TGTCAGTTTGTAGGCCATCACAGTAAAGAGAGACAGCCAGCTGACTaGAATCGAAGTATCATTAACAAAGTGGATGGAAAGTTGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: CQFVGHHSKERQPAD*NRSIINKVDGKLDP Trigger: AGGATCCAACTTTCCATCCACTTTGTTAATGATACTTCGATTCAAGTCAGCTGGCTGTCTCTCTTTACTGTGATGGCCTACAAACTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057324.4 ENSMUST00000110117.2 |
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