Pregenerated sensors for FKBP14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038074Ensembl transcript IDs: ENSMUST00000046520.13, ENSMUST00000117375.2, ENSMUST00000155047.6
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTTGAGAAGACAGAGGGAGGGAGAAGTACAGGGCCCTGGTCTGTaGTACACCCTGTGTGTATGCTGGGGTGTGTTTCCAGTTGCCATG | + |
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Preference number: 1 (lower is better) Translates to: TLRRQREGEVQGPGL*YTLCVCWGVFPVAM Trigger: CATGGCAACTGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCCCTCCCTCTGTCTTCTCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CCA 90 bp | GATTCTTTCTTCTTCACTGCTCCAGCGCAGATGGTGGTGGCAGCTTaGAGCAAAGCAGCCTTCAAGACACACCACTGGTCTACGACACTC | + |
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Preference number: 1 (lower is better) Translates to: DSFFFTAPAQMVVAA*SKAAFKTHHWSTTL Trigger: GAGTGTCGTAGACCAGTGGTGTGTCTTGAAGGCTGCTTTGCTCCAAGCTGCCACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR GCA 90 bp | GAGGGAGAAGTACAGGGCCCTGGTCTGTGCTACACCCTGTGTGTATaGTGGGGTGTGTTTCCAGTTGCCATGTTACCATTAGAAAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: EGEVQGPGLCYTLCV*WGVFPVAMLPLERS Trigger: GCTTCTTTCTAATGGTAACATGGCAACTGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CCA 90 bp | GGAGAAGTACAGGGCCCTGGTCTGTGCTACACCCTGTGTGTATGCTaGGGTGTGTTTCCAGTTGCCATGTTACCATTAGAAAGAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: GEVQGPGLCYTLCVC*GVFPVAMLPLERSK Trigger: CTTGCTTCTTTCTAATGGTAACATGGCAACTGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CCA 90 bp | GAGCAAAGCAGCCTTCAAGACACACCACTGGTCTACGACACTCACTaGCTTTCTCACAACCTCCCCAGAAAAATGCAGGTGGCAACAGTT | + |
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Preference number: 1 (lower is better) Translates to: EQSSLQDTPLVYDTH*LSHNLPRKMQVATV Trigger: AACTGTTGCCACCTGCATTTTTCTGGGGAGGTTGTGAGAAAGCCAGTGAGTGTCGTAGACCAGTGGTGTGTCTTGAAGGCTGCTTTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR TCA 90 bp | GAGACGCAAACTTGCTGCATCTTCATTAGCAGAGAAGTGGAAGACTaGACTCAGGGACTGAAGGTGCATCTACAGCTTAGGCACCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ETQTCCIFISREVED*TQGLKVHLQLRHQG Trigger: GCCTTGGTGCCTAAGCTGTAGATGCACCTTCAGTCCCTGAGTTCAGTCTTCCACTTCTCTGCTAATGAAGATGCAGCAAGTTTGCGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR TCA 90 bp | ACTCGTGGGACCTTGGGCCATTTCGAATTTCCAGGAGGTCAATGTTaGATATCAGTGTGCTCTCTGGAGGGATTTTACCGTTGCCGATGG | + |
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Preference number: 1 (lower is better) Translates to: TRGTLGHFEFPGGQC*ISVCSLEGFYRCRW Trigger: CCATCGGCAACGGTAAAATCCCTCCAGAGAGCACACTGATATTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGTCCCACGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR TCA 90 bp | ACCTCATGCTTAGAGAGTCTCCAGTCGTCATTGAGGTCCATTTCTTaGAACGACTCGTGGGACCTTGGGCCATTTCGAATTTCCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TSCLESLQSSLRSIS*NDSWDLGPFRISRR Trigger: CCTCCTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGTTTCAAGAAATGGACCTCAATGACGACTGGAGACTCTCTAAGCATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR GCA 90 bp | TGGTCTGTGCTACACCCTGTGTGTATGCTGGGGTGTGTTTCCAGTTaGCATGTTACCATTAGAAAGAAGCAAGGAAGCAAAGCCAACTCC | + |
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Preference number: 1 (lower is better) Translates to: WSVLHPVCMLGCVSS*HVTIRKKQGSKANS Trigger: GGAGTTGGCTTTGCTTCCTTGCTTCTTTCTAATGGTAACATGGCAACTGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR TCA 90 bp | CTTGAACTAGCACAAAAGCTTTCAAATATGCCAGTAACTGGACTTTaGGAAGACAGAGGGAGGGAGAAGTACAGGGCCCTGGTCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LELAQKLSNMPVTGL*EDRGREKYRALVCA Trigger: AGCACAGACCAGGGCCCTGTACTTCTCCCTCCCTCTGTCTTCTCAAAGTCCAGTTACTGGCATATTTGAAAGCTTTTGTGCTAGTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CCA 90 bp | CCAGTCGTCATTGAGGTCCATTTCTTGAAACGACTCGTGGGACCTTaGGCCATTTCGAATTTCCAGGAGGTCAATGTTGAATATCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: PVVIEVHFLKRLVGP*AISNFQEVNVEYQC Trigger: ACACTGATATTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGTTTCAAGAAATGGACCTCAATGACGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR GCA 90 bp | ATTTGGTGTTTGACTATTCCCACTAATGGGAGGGTGCAAAGGCATTaGTATACACAATGGCAGATGGCTTTAACAACCATTTTCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: IWCLTIPTNGRVQRH*YTQWQMALTTIFSR Trigger: CCTGGAGAAAATGGTTGTTAAAGCCATCTGCCATTGTGTATAGCAATGCCTTTGCACCCTCCCATTAGTGGGAATAGTCAAACACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR CCA 90 bp | ACTATTCCCACTAATGGGAGGGTGCAAAGGCATTGCTATACACAATaGCAGATGGCTTTAACAACCATTTTCTCCAGGTATGTCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: TIPTNGRVQRHCYTQ*QMALTTIFSRYVFL Trigger: AAGAAAGACATACCTGGAGAAAATGGTTGTTAAAGCCATCTGCCATTGTGTATAGCAATGCCTTTGCACCCTCCCATTAGTGGGAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR TCA 90 bp | TTGGTTAGCCTTATTTTTCATGAATCAGAAATGGGGAAGTCTCATTaGCATACTAATTTCTCCCAGGATTCAATGCTGTTGCAAAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: LVSLIFHESEMGKSH*HTNFSQDSMLLQSN Trigger: ATTACTTTGCAACAGCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACTTCCCCATTTCTGATTCATGAAAAATAAGGCTAACCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CCA 90 bp | AATAGTAGCTGTTATTGGTTAGCCTTATTTTTCATGAATCAGAAATaGGGAAGTCTCATTGACATACTAATTTCTCCCAGGATTCAATGC | + |
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Preference number: 1 (lower is better) Translates to: NSSCYWLALFFMNQK*GSLIDILISPRIQC Trigger: GCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACTTCCCCATTTCTGATTCATGAAAAATAAGGCTAACCAATAACAGCTACTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CAA 90 bp | AGATTCTTTCTTCTTCACTGCTCCAGCGCAGATGGTGGTGGCAGCTaGGAGCAAAGCAGCCTTCAAGACACACCACTGGTCTACGACACT | + |
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Preference number: 2 (lower is better) Translates to: RFFLLHCSSADGGGS*EQSSLQDTPLVYDT Trigger: AGTGTCGTAGACCAGTGGTGTGTCTTGAAGGCTGCTTTGCTCCAAGCTGCCACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | TGCTACCTCCCTCATTCATCCACATTGTGTATCTCCACAGTAAGGCCAGAGCTCGACAGGGAAGGGACATaGATAGACCGGTGGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CYLPHSSTLCISTVRPELDREGT*IDRWES Trigger: GCTTTCCCACCGGTCTATGCATGTCCCTTCCCTGTC...GAGCTCTGGCCTTACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCACCATATTCCTCCTGCCTGCAAGCAGGGACTCAAAAGCAGGTAAAGAAACCCTGTGTGTATGCTaGGGTGTGTTTCCAGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RSTIFLLPASRDSKAGKETLCVC*GVFPVA Trigger: GGCAACTGGAAACACACCCCAGCATACACACAGGGT...TTCTTTACCTGCTTTTGAGTCCCTGCTTGCAGGCAGGAGGAATATGGTGGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTACCTCCCTCATTCATCCACATTGTGTATCTCCACAGTAAGGCCAGAGCTCACCCTGTGTGTATGCTaGGGTGTGTTTCCAGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: CYLPHSSTLCISTVRPELTLCVC*GVFPVA Trigger: GGCAACTGGAAACACACCCCAGCATACACACAGGGT...GAGCTCTGGCCTTACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR CAA 90 bp | GACTCGTGGGACCTTGGGCCATTTCGAATTTCCAGGAGGTCAATGTaGAATATCAGTGTGCTCTCTGGAGGGATTTTACCGTTGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: DSWDLGPFRISRRSM*NISVLSGGILPLPM Trigger: CATCGGCAACGGTAAAATCCCTCCAGAGAGCACACTGATATTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR CAA 90 bp | AACCTCATGCTTAGAGAGTCTCCAGTCGTCATTGAGGTCCATTTCTaGAAACGACTCGTGGGACCTTGGGCCATTTCGAATTTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: NLMLRESPVVIEVHF*KRLVGPWAISNFQE Trigger: CTCCTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGTTTCAAGAAATGGACCTCAATGACGACTGGAGACTCTCTAAGCATGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR-3UTR TCA 90 bp | GTAATTGAGTGGTCAAGATTCTTTCTTCTTCACTGCTCCAGCGCAGATGGTGGTACTGAACTCAGGGACTaGAGGTGCATCTACAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: VIEWSRFFLLHCSSADGGTELRD*RCIYSL Trigger: TAAGCTGTAGATGCACCTTCAGTCCCTGAGTTCAGT...ACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATCTTGACCACTCAATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | TGCTACCTCCCTCATTCATCCACATTGTGTATCTCCACAGTAAGGCCAGAGCTCAAAGACAACCGTTCCTaGCCAATAACTCACTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CYLPHSSTLCISTVRPELKDNRS*PITHWK Trigger: TTTCCAGTGAGTTATTGGGCAGGAACGGTTGTCTTT...GAGCTCTGGCCTTACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | GACCACCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCTACACCCTGTGTGTATaGTGGGGTGTGTTTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: DHLFMSCYLPHSSTLCISYTLCV*WGVFPV Trigger: AACTGGAAACACACCCCAGCATACACACAGGGTGTA...GGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | AACTTAGATGCCATAAGACATACACCTAACCCCTCTCAGGGGGTTACTGGGAGATCATTAGCAGAGAAGTaGAAGACTGAACTCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: NLDAIRHTPNPSQGVTGRSLAEK*KTELRD Trigger: GTCCCTGAGTTCAGTCTTCCACTTCTCTGCTAATGA...TCTCCCAGTAACCCCCTGAGAGGGGTTAGGTGTATGTCTTATGGCATCTAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGATGCTAAGGGAAATAAGGACCAAGAGAGAGAGACGCAAACTTGCTGCATATCAGTGTGCTCTCTaGAGGGATTTTACCGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: VKMLREIRTKRERRKLAAYQCAL*RDFTVA Trigger: GGCAACGGTAAAATCCCTCCAGAGAGCACACTGATA...TGCAGCAAGTTTGCGTCTCTCTCTCTTGGTCCTTATTTCCCTTAGCATCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR CAA 90 bp | TCTGACCACCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATaGTGTATCTCCACAGTAAGGCCAGAGCTCTTAAGGAATAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SDHLFMSCYLPHSST*CISTVRPELLRNKV Trigger: GACCTTATTCCTTAAGAGCTCTGGCCTTACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGGTGGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR TCA 90 bp | TTACTGGGAGAGAGACACACAAAGCAAGACTATTCTCAGAAAACACAGACCTTCTCCACCAAAGCATCGTaGTGGCTTTCATTCACCACG | + |
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Preference number: 2 (lower is better) Translates to: LLGERHTKQDYSQKTQTFSTKAS*WLSFTT Trigger: CGTGGTGAATGAAAGCCATCACGATGCTTTGGTGGA...GAAGGTCTGTGTTTTCTGAGAATAGTCTTGCTTTGTGTGTCTCTCTCCCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | GTAATTGAGTGGTCAAGATTCTTTCTTCTTCACTGCTCCAGCGCAGATGGTGGTCACCTATTCATGAGTTaGTACCTCCCTCATTCATCC | + |
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Preference number: 2 (lower is better) Translates to: VIEWSRFFLLHCSSADGGHLFMS*YLPHSS Trigger: GGATGAATGAGGGAGGTAGCAACTCATGAATAGGTG...ACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATCTTGACCACTCAATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | GACCACCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCAAAGACAACCGTTCCTaGCCAATAACTCACTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: DHLFMSCYLPHSSTLCISKDNRS*PITHWK Trigger: TTTCCAGTGAGTTATTGGGCAGGAACGGTTGTCTTT...GGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | TCCACAGTAAGGCCAGAGCTCTTAAGGAATAAGGTCCACCATATTCCTCCTGCCTTTGTTCAAAGGTGCTaGCTTTCCATTAGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: STVRPELLRNKVHHIPPAFVQRC*LSIRNE Trigger: TTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAA...GGCAGGAGGAATATGGTGGACCTTATTCCTTAAGAGCTCTGGCCTTACTGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACTATTCTCAGAAAACACAGACCTTCCTGGATCCTAAGGAAAGCTGTGATCCCAGAAAAATGCAGGTaGCAACAGTTACAGTTACCC | + |
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Preference number: 2 (lower is better) Translates to: KTILRKHRPSWILRKAVIPEKCR*QQLQLP Trigger: GGGTAACTGTAACTGTTGCCACCTGCATTTTTCTGG...GATCACAGCTTTCCTTAGGATCCAGGAAGGTCTGTGTTTTCTGAGAATAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR TCA 90 bp | CCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCACAGTGAAAATAGCAAGCCTTaGACTAGCACAAAAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PIHELLPPSFIHIVYLHSENSKP*TSTKAF Trigger: GAAAGCTTTTGTGCTAGTTCAAGGCTTGCTATTTTC...ACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | TTACTGGGAGAGAGACACACAAAGCAAGACTATTCTCAGAAAACACAGACCTTCTACAACTCTCTGCCATaGCTACCATATTTTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLGERHTKQDYSQKTQTFYNSLP*LPYFGV Trigger: CACACCAAAATATGGTAGGCATGGCAGAGAGTTGTA...GAAGGTCTGTGTTTTCTGAGAATAGTCTTGCTTTGTGTGTCTCTCTCCCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | AAGACTATTCTCAGAAAACACAGACCTTCCTGGATCCTAAGGAAAGCTGTGATCTACAACTCTCTGCCATaGCTACCATATTTTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KTILRKHRPSWILRKAVIYNSLP*LPYFGV Trigger: CACACCAAAATATGGTAGGCATGGCAGAGAGTTGTA...GATCACAGCTTTCCTTAGGATCCAGGAAGGTCTGTGTTTTCTGAGAATAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | GACCACCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCATGCCTACCATATTTTaGTGTGTTGATTACAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DHLFMSCYLPHSSTLCISMPTIF*CVDYKE Trigger: TTCCTTGTAATCAACACACCAAAATATGGTAGGCAT...GGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGGTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCATTGACATACTAATTTCTCCCAGGATTCAATGCTGTTGCAAAGTAATAGTCTCCAGTCGTCATTaGGGTCCATTTCTTGAAACG | + |
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Preference number: 2 (lower is better) Translates to: SLIDILISPRIQCCCKVIVSSRH*GPFLET Trigger: CGTTTCAAGAAATGGACCTCAATGACGACTGGAGAC...TATTACTTTGCAACAGCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTATAAAATGGCAAAAGACAACCGTTCCTaGCCAATAACTCACTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ALFKGAAFPLEMNVYKMAKDNRS*PITHWK Trigger: TTTCCAGTGAGTTATTGGGCAGGAACGGTTGTCTTT...TGCCATTTTATACACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR CCA 90 bp | GACTATTCTCAGAAAACACAGACCTTCCTGGATCCTAAGGAAAGCTGTGATCAGTTCATGAATCAGAAATaGGGAAGTCTCATTGACATA | + |
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Preference number: 2 (lower is better) Translates to: DYSQKTQTFLDPKESCDQFMNQK*GSLIDI Trigger: TATGTCAATGAGACTTCCCCATTTCTGATTCATGAA...CTGATCACAGCTTTCCTTAGGATCCAGGAAGGTCTGTGTTTTCTGAGAATAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | TTACTGGGAGAGAGACACACAAAGCAAGACTATTCTCAGAAAACACAGACCTTCTTTGTTCAAAGGTGCTaGCTTTCCATTAGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: LLGERHTKQDYSQKTQTFFVQRC*LSIRNE Trigger: TTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAA...GAAGGTCTGTGTTTTCTGAGAATAGTCTTGCTTTGTGTGTCTCTCTCCCAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | GACAACCGTTCCTGCCCAATAACTCACTGGAAAGATACGAACGATATTTACAAAAGCTTTGTTCAAAGGTaGTGCCTTTCCATTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: DNRSCPITHWKDTNDIYKSFVQR*CLSIRN Trigger: ATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCT...TTTGTAAATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR GCA 90 bp | GGCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTTTTGTTCAAAGGTGCTaGCTTTCCATTAGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: GKEKSFVQRCCLSIRNERFVQRC*LSIRNE Trigger: TTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAA...ACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCATTGACATACTAATTTCTCCCAGGATTCAATGCTGTTGCAAAGTAATAGAAAATAGCAAGCCTTaGACTAGCACAAAAGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SLIDILISPRIQCCCKVIENSKP*TSTKAF Trigger: GAAAGCTTTTGTGCTAGTTCAAGGCTTGCTATTTTC...TATTACTTTGCAACAGCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR-3UTR GCA 90 bp | AACTCTCTGCCATGCCTACCATATTTTGGTGTGTTGATTACAAGGAAACAAATAAGCTTTGTTCAAAGGTaGTGCCTTTCCATTAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NSLPCLPYFGVLITRKQISFVQR*CLSIRN Trigger: ATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCT...TATTTGTTTCCTTGTAATCAACACACCAAAATATGGTAGGCATGGCAGAGAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTAGCCTTATTTTTCATGAATCAGAAATGGGGAAGTCTCATTGACATACTATCTCCCAGGATTCAATaGTGTTGCAAAGTAATATAC | + |
|
Preference number: 2 (lower is better) Translates to: WLALFFMNQKWGSLIDILSPRIQ*CCKVIY Trigger: GTATATTACTTTGCAACAGCATTGAATCCTGGGAGA...TAGTATGTCAATGAGACTTCCCCATTTCTGATTCATGAAAAATAAGGCTAACCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR GCA 72 bp | AGACAGAGGGAGGGAGAAGTACAGGGCCCTGGTCTGTaGTACACCCTGTGTGTATGCTGGGGTGTGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQREGEVQGPGL*YTLCVCWGVFP Trigger: TGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCCCTCCCTCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | AGCAAAGCCAACTCCCATGTGAGCTTAGAAGCGGCCTaGGAGTCCTCTACTCAAAGACAACCGTTCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SKANSHVSLEAA*ESSTQRQPFLP Trigger: GGGCAGGAACGGTTGTCTTTGAGTAGAGGACTCCCAGGCCGCTTCTAAGCTCACATGGGAGTTGGCTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | TTTGAGAAGACAGAGGGAGGGAGAAGTACAGGGCCCTaGTCTGTGCTACACCCTGTGTGTATGCTGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FEKTEGGRSTGP*SVLHPVCMLGC Trigger: ACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCCCTCCCTCTGTCTTCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | TTCTTCACTGCTCCAGCGCAGATGGTGGTGGCAGCTTaGAGCAAAGCAGCCTTCAAGACACACCACTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FFTAPAQMVVAA*SKAAFKTHHWS Trigger: AGACCAGTGGTGTGTCTTGAAGGCTGCTTTGCTCCAAGCTGCCACCACCATCTGCGCTGGAGCAGTGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | TCAGTGTGCTCTCTGGAGGGATTTTACCGTTGCCGATaGAGACAGGGAAGGGACATGCATAGACCGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVCSLEGFYRCR*RQGRDMHRPVG Trigger: TCCCACCGGTCTATGCATGTCCCTTCCCTGTCTCCATCGGCAACGGTAAAATCCCTCCAGAGAGCACACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | GGACTGAAGGTGCATCTACAGCTTAGGCACCAAGGCTaGGCTCACCAGCCAATCTCTGAACAGAGCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GLKVHLQLRHQG*AHQPISEQSFS Trigger: TGAGAAGCTCTGTTCAGAGATTGGCTGGTGAGCCCAGCCTTGGTGCCTAAGCTGTAGATGCACCTTCAGTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | GCAGCTTGGAGCAAAGCAGCCTTCAAGACACACCACTaGTCTACGACACTCACTGGCTTTCTCACAACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AAWSKAAFKTHH*STTLTGFLTTS Trigger: GGAGGTTGTGAGAAAGCCAGTGAGTGTCGTAGACCAGTGGTGTGTCTTGAAGGCTGCTTTGCTCCAAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | CAGGGCCCTGGTCTGTGCTACACCCTGTGTGTATGCTaGGGTGTGTTTCCAGTTGCCATGTTACCATTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QGPGLCYTLCVC*GVFPVAMLPLE Trigger: TTCTAATGGTAACATGGCAACTGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR TCA 72 bp | TCATTAGCAGAGAAGTGGAAGACTGAACTCAGGGACTaGAGGTGCATCTACAGCTTAGGCACCAAGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLAEKWKTELRD*RCIYSLGTKAG Trigger: CCCAGCCTTGGTGCCTAAGCTGTAGATGCACCTTCAGTCCCTGAGTTCAGTCTTCCACTTCTCTGCTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | AGCCTTCAAGACACACCACTGGTCTACGACACTCACTaGCTTTCTCACAACCTCCCCAGAAAAATGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLQDTPLVYDTH*LSHNLPRKMQV Trigger: CACCTGCATTTTTCTGGGGAGGTTGTGAGAAAGCCAGTGAGTGTCGTAGACCAGTGGTGTGTCTTGAAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | GACCACCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCGCCAGTAACTGGACTTaGAGAAGACAGAGGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DHLFMSCYLPHSSTLCISASNWT*RRQREG Trigger: TCCCTCCCTCTGTCTTCTCAAAGTCCAGTTACTGGC...GGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGGTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR GCA 72 bp | CGGCCTGGGAGTCCTCTACTCAAAGACAACCGTTCCTaGCCAATAACTCACTGGAAAGATACGAACGATATT | + |
|
Preference number: 3 (lower is better) Translates to: RPGSPLLKDNRS*PITHWKDTNDI Trigger: AATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTCTTTGAGTAGAGGACTCCCAGGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR GCA 72 bp | CATGTAATTGAGTGGTCAAGATTCTTTCTTCTTCACTaGTCCAGCGCAGATGGTGGTGGCAGCTTGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HVIEWSRFFLLH*SSADGGGSLEQ Trigger: TTGCTCCAAGCTGCCACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATCTTGACCACTCAATTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | GACTATTCTCAGAAAACACAGACCTTCCTGGATCCTAAGGAAAGCTGTGATCAGACGACTCGTGGGACCTaGGGCCATTTCGAATTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DYSQKTQTFLDPKESCDQTTRGT*GHFEFP Trigger: TGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGT...CTGATCACAGCTTTCCTTAGGATCCAGGAAGGTCTGTGTTTTCTGAGAATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAGTAAGGCCAGAGCTCTTAAGGAATAAGGTCCACCATATTCCTCCTGCCGCAAAGAGAAAAGCTTaGTTCAAAGGTGCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: STVRPELLRNKVHHIPPAAKRKA*FKGAAF Trigger: AAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGC...GGCAGGAGGAATATGGTGGACCTTATTCCTTAAGAGCTCTGGCCTTACTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR TCA 72 bp | TTAGAGAGTCTCCAGTCGTCATTGAGGTCCATTTCTTaGAACGACTCGTGGGACCTTGGGCCATTTCGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LESLQSSLRSIS*NDSWDLGPFRI Trigger: AATTCGAAATGGCCCAAGGTCCCACGAGTCGTTTCAAGAAATGGACCTCAATGACGACTGGAGACTCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR TCA 72 bp | ACCTTGGGCCATTTCGAATTTCCAGGAGGTCAATGTTaGATATCAGTGTGCTCTCTGGAGGGATTTTACCGT | + |
|
Preference number: 3 (lower is better) Translates to: TLGHFEFPGGQC*ISVCSLEGFYR Trigger: ACGGTAAAATCCCTCCAGAGAGCACACTGATATTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR CCA 72 bp | ATTGAGGTCCATTTCTTGAAACGACTCGTGGGACCTTaGGCCATTTCGAATTTCCAGGAGGTCAATGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: IEVHFLKRLVGP*AISNFQEVNVE Trigger: TTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGTTTCAAGAAATGGACCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCACAGTGCAAAGAGAAAAGCTTaGTTCAAAGGTGCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PIHELLPPSFIHIVYLHSAKRKA*FKGAAF Trigger: AAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGC...ACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR GCA 72 bp | TTGACTATTCCCACTAATGGGAGGGTGCAAAGGCATTaGTATACACAATGGCAGATGGCTTTAACAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: LTIPTNGRVQRH*YTQWQMALTTI Trigger: AATGGTTGTTAAAGCCATCTGCCATTGTGTATAGCAATGCCTTTGCACCCTCCCATTAGTGGGAATAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR GCA 72 bp | TGTATAAAATGGCAGGCGCGTCCCTACAGTTCGTCGTaGACATATGTAAATTCTCTGGCAGATATAAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: CIKWQARPYSSS*TYVNSLADINP Trigger: TGGATTTATATCTGCCAGAGAATTTACATATGTGCACGACGAACTGTAGGGACGCGCCTGCCATTTTATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCATTGACATACTAATTTCTCCCAGGATTCAATGCTGTTGCAAAGTAATAGCCAGTAACTGGACTTaGAGAAGACAGAGGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLIDILISPRIQCCCKVIASNWT*RRQREG Trigger: TCCCTCCCTCTGTCTTCTCAAAGTCCAGTTACTGGC...TATTACTTTGCAACAGCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | GTAATTGAGTGGTCAAGATTCTTTCTTCTTCACTGCTCCAGCGCAGATGGTGGTCAGGATTCAATGCTGTaGCAAAGTAATATACTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VIEWSRFFLLHCSSADGGQDSML*QSNILA Trigger: AGCTAGTATATTACTTTGCAACAGCATTGAATCCTG...ACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATCTTGACCACTCAATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAGATGCTAAGGGAAATAAGGACCAAGAGAGAGAGACGCAAACTTGCTGCACAGGATTCAATGCTGTaGCAAAGTAATATACTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VKMLREIRTKRERRKLAAQDSML*QSNILA Trigger: AGCTAGTATATTACTTTGCAACAGCATTGAATCCTG...TGCAGCAAGTTTGCGTCTCTCTCTCTTGGTCCTTATTTCCCTTAGCATCTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACAACCGTTCCTGCCCAATAACTCACTGGAAAGATACGAACGATATTTACTCCAGGAGGTCAATGTaGAATATCAGTGTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDNRSCPITHWKDTNDIYSRRSM*NISVLS Trigger: AGAGAGCACACTGATATTCAACATTGACCTCCTGGA...GTAAATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR-3UTR CAA 90 bp | GACAACCGTTCCTGCCCAATAACTCACTGGAAAGATACGAACGATATTTACAAAGCAAAGAGAAAAGCTTaGTTCAAAGGTGCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DNRSCPITHWKDTNDIYKAKRKA*FKGAAF Trigger: AAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGC...TTTGTAAATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| 3UTR TCA 72 bp | TCGTGTTGCAATACAATGTCTACAAACAACAGGAAGTaGCAGGAACAGGTGAACTTAGATGCCATAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SCCNTMSTNNRK*QEQVNLDAIRH Trigger: ATGTCTTATGGCATCTAAGTTCACCTGTTCCTGTCACTTCCTGTTGTTTGTAGACATTGTATTGCAACACGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR GCA 72 bp | TTCTCAAACTCCTTCTGTAAATACACTTTAACCTCATaGTTAGAGAGTCTCCAGTCGTCATTGAGGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: FSNSFCKYTLTS*LESLQSSLRSI Trigger: AATGGACCTCAATGACGACTGGAGACTCTCTAAGCATGAGGTTAAAGTGTATTTACAGAAGGAGTTTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| 3UTR TCA 72 bp | CTTATTTTTCATGAATCAGAAATGGGGAAGTCTCATTaGCATACTAATTTCTCCCAGGATTCAATGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LIFHESEMGKSH*HTNFSQDSMLL Trigger: CAACAGCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACTTCCCCATTTCTGATTCATGAAAAATAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
||
| CDS-3UTR TCA 90 bp | TACAGGGCCCTGGTCTGTGCTACACCCTGTGTGTATGCTGGGGTGTGTTTCCAGCCAGTATGCCCAGGGTaGACCAGACAGGCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRALVCATPCVYAGVCFQPVCPG*TRQADH Trigger: ATGGTCAGCCTGTCTGGTTCACCCTGGGCATACTGG...CTGGAAACACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR CAA 72 bp | CTTCTTCACTGCTCCAGCGCAGATGGTGGTGGCAGCTaGGAGCAAAGCAGCCTTCAAGACACACCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHCSSADGGGS*EQSSLQDTPLV Trigger: GACCAGTGGTGTGTCTTGAAGGCTGCTTTGCTCCAAGCTGCCACCACCATCTGCGCTGGAGCAGTGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| CDS-3UTR TCA 90 bp | GATGGAGACAGGGAAGGGACATGCATAGACCGGTGGGAAAGCTGGTATCTTTCCCCAGTATGCCCAGGGTaGACCAGACAGGCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGDREGTCIDRWESWYLSPVCPG*TRQADH Trigger: ATGGTCAGCCTGTCTGGTTCACCCTGGGCATACTGG...GGAAAGATACCAGCTTTCCCACCGGTCTATGCATGTCCCTTCCCTGTCTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGTACAGGGCCCTGGTCTGTGCTACACCCTGTGTGTATGCTGGGGTGTGTACCTTTTCCTTCTTTaGCATAGCCCAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEVQGPGLCYTLCVCWGVYLFLL*HSPGQE Trigger: CTCCTGCCCTGGGCTATGGCAAAGAAGGAAAAGGTA...CACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGTACAGGGCCCTGGTCTGTGCTACACCCTGTGTGTATGCTGGGGTGTGATTCCCTTCAAGCCTTaGTCCCAGCCTTTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GEVQGPGLCYTLCVCWGVIPFKP*SQPLRT Trigger: GGTTCTCAAAGGCTGGGACCAAGGCTTGAAGGGAAT...CACACCCCAGCATACACACAGGGTGTAGCACAGACCAGGGCCCTGTACTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| CDS-3UTR GCA 90 bp | TGCTACCTCCCTCATTCATCCACATTGTGTATCTCCACAGTAAGGCCAGAGCTCTTCACCACGGCACCGTaGTTCTCAAACTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYLPHSSTLCISTVRPELFTTAP*FSNSFC Trigger: ACAGAAGGAGTTTGAGAAGCACGGTGCCGTGGTGAA...GAGCTCTGGCCTTACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCCACCATATTCCTCCTGCCTGCAAGCAGGGACTCAAAAGCAGGTAAAGAATCTTGCGATGGCAGATaGATGGCTTCTGGAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RSTIFLLPASRDSKAGKESCDGR*MASGEL Trigger: AAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGA...TTCTTTACCTGCTTTTGAGTCCCTGCTTGCAGGCAGGAGGAATATGGTGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| CDS-3UTR CCA 90 bp | GGGTTACTGGGAGAGAGACACACAAAGCAAGACTATTCTCAGAAAACACAGACCCCCTTGGTCTTGCGATaGCAGATGAATGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGERHTKQDYSQKTQTPLVLR*QMNGFW Trigger: CCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGG...GGTCTGTGTTTTCTGAGAATAGTCTTGCTTTGTGTGTCTCTCTCCCAGTAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
||
| 3UTR CAA 72 bp | CTTAGAGAGTCTCCAGTCGTCATTGAGGTCCATTTCTaGAAACGACTCGTGGGACCTTGGGCCATTTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRESPVVIEVHF*KRLVGPWAISN Trigger: ATTCGAAATGGCCCAAGGTCCCACGAGTCGTTTCAAGAAATGGACCTCAATGACGACTGGAGACTCTCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| CDS-3UTR TCA 90 bp | GGGTTACTGGGAGAGAGACACACAAAGCAAGACTATTCTCAGAAAACACAGACCTCCACCAAAGCATCGTaGTGGCTTTCATTCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGERHTKQDYSQKTQTSTKAS*WLSFTT Trigger: CGTGGTGAATGAAAGCCATCACGATGCTTTGGTGGA...GGTCTGTGTTTTCTGAGAATAGTCTTGCTTTGTGTGTCTCTCTCCCAGTAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046520.13 |
||
| CDS-3UTR TCA 90 bp | GTGAAGATGCTAAGGGAAATAAGGACCAAGAGAGAGAGACGCAAACTTGCTGCAGTCTCCAGTCGTCATTaGGGTCCATTTCTTGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: VKMLREIRTKRERRKLAAVSSRH*GPFLET Trigger: CGTTTCAAGAAATGGACCTCAATGACGACTGGAGAC...TGCAGCAAGTTTGCGTCTCTCTCTCTTGGTCCTTATTTCCCTTAGCATCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046520.13 |
||
| 3UTR CAA 72 bp | GACCTTGGGCCATTTCGAATTTCCAGGAGGTCAATGTaGAATATCAGTGTGCTCTCTGGAGGGATTTTACCG | + |
|
Preference number: 4 (lower is better) Translates to: DLGPFRISRRSM*NISVLSGGILP Trigger: CGGTAAAATCCCTCCAGAGAGCACACTGATATTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155047.6 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGCGACTCGTGGGACCTTaGGCCATTTCGAATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKRKALFKGAAFPLEMNVRLVGP*AISNFQ Trigger: CTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCG...CACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
||
| 3UTR CAA 72 bp | CTATTCATGAGTTGCTACCTCCCTCATTCATCCACATaGTGTATCTCCACAGTAAGGCCAGAGCTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFMSCYLPHSST*CISTVRPELLR Trigger: CCTTAAGAGCTCTGGCCTTACTGTGGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 ENSMUST00000155047.6 |
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| CDS-3UTR TCA 90 bp | GCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTCCACCAAAGCATCGTaGTGGCTTTCATTCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: AKRKALFKGAAFPLEMNVSTKAS*WLSFTT Trigger: CGTGGTGAATGAAAGCCATCACGATGCTTTGGTGGA...CACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR GCA 90 bp | GCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTATAAAATGGCATACCTTTTCCTTCTTTaGCATAGCCCAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALFKGAAFPLEMNVYKMAYLFLL*HSPGQE Trigger: CTCCTGCCCTGGGCTATGGCAAAGAAGGAAAAGGTA...TGCCATTTTATACACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR GCA 90 bp | GCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTATAAAATGGCATTCACCACGGCACCGTaGTTCTCAAACTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFKGAAFPLEMNVYKMAFTTAP*FSNSFC Trigger: ACAGAAGGAGTTTGAGAAGCACGGTGCCGTGGTGAA...TGCCATTTTATACACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR CCA 90 bp | TTACTGGGAGAGAGACACACAAAGCAAGACTATTCTCAGAAAACACAGACCTTCTTCGATTTTCACTTCTaGCTCAGGAATCAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLGERHTKQDYSQKTQTFFDFHF*LRNQSS Trigger: GGAGCTCTGATTCCTGAGCCAGAAGTGAAAATCGAA...GAAGGTCTGTGTTTTCTGAGAATAGTCTTGCTTTGTGTGTCTCTCTCCCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CCA 90 bp | GTAATTGAGTGGTCAAGATTCTTTCTTCTTCACTGCTCCAGCGCAGATGGTGGTCAGATGAATGGCTTCTaGAGAACTTCGATTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VIEWSRFFLLHCSSADGGQMNGF*RTSIFT Trigger: AGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTG...ACCACCATCTGCGCTGGAGCAGTGAAGAAGAAAGAATCTTGACCACTCAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CCA 90 bp | GCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTATAAAATGGCAATTCCCTTCAAGCCTTaGTCCCAGCCTTTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: ALFKGAAFPLEMNVYKMAIPFKP*SQPLRT Trigger: GGTTCTCAAAGGCTGGGACCAAGGCTTGAAGGGAAT...TGCCATTTTATACACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CCA 90 bp | AACTCTCTGCCATGCCTACCATATTTTGGTGTGTTGATTACAAGGAAACAAATACGACTCGTGGGACCTTaGGCCATTTCGAATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLPCLPYFGVLITRKQIRLVGP*AISNFQ Trigger: CTGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCG...TATTTGTTTCCTTGTAATCAACACACCAAAATATGGTAGGCATGGCAGAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR TCA 90 bp | AACTCTCTGCCATGCCTACCATATTTTGGTGTGTTGATTACAAGGAAACAAATATCTTGCGATGGCAGATaGATGGCTTCTGGAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NSLPCLPYFGVLITRKQISCDGR*MASGEL Trigger: AAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGA...TATTTGTTTCCTTGTAATCAACACACCAAAATATGGTAGGCATGGCAGAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CCA 90 bp | TGGTTAGCCTTATTTTTCATGAATCAGAAATGGGGAAGTCTCATTGACATACTATTCGATTTTCACTTCTaGCTCAGGAATCAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLALFFMNQKWGSLIDILFDFHF*LRNQSS Trigger: GGAGCTCTGATTCCTGAGCCAGAAGTGAAAATCGAA...TAGTATGTCAATGAGACTTCCCCATTTCTGATTCATGAAAAATAAGGCTAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CCA 90 bp | GCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTATAAAATGGCACAGATGAATGGCTTCTaGAGAACTTCGATTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALFKGAAFPLEMNVYKMAQMNGF*RTSIFT Trigger: AGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTG...TGCCATTTTATACACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| 3UTR CAA 72 bp | ATTCTCGCCAGTAACAATGTCAATGCAGAATTCGTGTaGCAATACAATGTCTACAAACAACAGGAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ILASNNVNAEFV*QYNVYKQQEVT Trigger: TGTCACTTCCTGTTGTTTGTAGACATTGTATTGCAACACGAATTCTGCATTGACATTGTTACTGGCGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS CCA 90 bp | GCGATGGCAGATGAATGGCTTCTGGAGAACTTCGATTTTCACTTCTaGCTCAGGAATCAGAGCTCCGCTCAGAACCGTGACCCACAGTGC | + |
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Preference number: 5 (lower is better) Translates to: AMADEWLLENFDFHF*LRNQSSAQNRDPQC Trigger: GCACTGTGGGTCACGGTTCTGAGCGGAGCTCTGATTCCTGAGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | AGGTCCACCATATTCCTCCTGCCTGCAAGCAGGGACTCAAAAGCAGGTAAAGAAATCAGATCCCCTCCCTaGGTCTTGCGATGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RSTIFLLPASRDSKAGKEIRSPP*VLRWQM Trigger: CATCTGCCATCGCAAGACCAAGGGAGGGGATCTGAT...TTCTTTACCTGCTTTTGAGTCCCTGCTTGCAGGCAGGAGGAATATGGTGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS CCA 90 bp | ATCAGATCCCCTCCCTTGGTCTTGCGATGGCAGATGAATGGCTTCTaGAGAACTTCGATTTTCACTTCTGGCTCAGGAATCAGAGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IRSPPLVLRWQMNGF*RTSIFTSGSGIRAP Trigger: CGGAGCTCTGATTCCTGAGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGATCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS TCA 90 bp | AGTGGACCAACATCAGATCCCCTCCCTTGGTCTTGCGATGGCAGATaGATGGCTTCTGGAGAACTTCGATTTTCACTTCTGGCTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGPTSDPLPWSCDGR*MASGELRFSLLAQE Trigger: TTCCTGAGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGATCTGATGTTGGTCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS CCA 90 bp | GACCAACATCAGATCCCCTCCCTTGGTCTTGCGATGGCAGATGAATaGCTTCTGGAGAACTTCGATTTTCACTTCTGGCTCAGGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: DQHQIPSLGLAMADE*LLENFDFHFWLRNQ Trigger: CTGATTCCTGAGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGATCTGATGTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | GACCACCTATTCATGAGTTGCTACCTCCCTCATTCATCCACATTGTGTATCTCCCATTCCCTTCAAGCCTaGGTCCCAGCCTTTGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DHLFMSCYLPHSSTLCISHSLQA*VPAFEN Trigger: GTTCTCAAAGGCTGGGACCAAGGCTTGAAGGGAATG...GGAGATACACAATGTGGATGAATGAGGGAGGTAGCAACTCATGAATAGGTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | GGCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTTCCCCTCCCTTGGTCTaGCGATGGCAGATGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GKEKSFVQRCCLSIRNERSPPLV*RWQMNG Trigger: GCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGA...ACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | GGCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTATCAGATCCCCTCCCTaGGTCTTGCGATGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GKEKSFVQRCCLSIRNERIRSPP*VLRWQM Trigger: CATCTGCCATCGCAAGACCAAGGGAGGGGATCTGAT...ACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | AAAAACAAGAAAGGCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTTCCCCTCCCTTGGTCTaGCGATGGCAGATGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNKKGKEKSFVQRCCLSISPPLV*RWQMNG Trigger: GCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGA...AATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGCCTTTCTTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | GACAACCGTTCCTGCCCAATAACTCACTGGAAAGATACGAACGATATTTACAAACATTCCCTTCAAGCCTaGGTCCCAGCCTTTGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DNRSCPITHWKDTNDIYKHSLQA*VPAFEN Trigger: GTTCTCAAAGGCTGGGACCAAGGCTTGAAGGGAATG...TTTGTAAATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | GACAACCGTTCCTGCCCAATAACTCACTGGAAAGATACGAACGATATTTACAAAACGACTCGTGGGACCTaGGGCCATTTCGAATTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DNRSCPITHWKDTNDIYKTTRGT*GHFEFP Trigger: TGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGT...TTTGTAAATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR CAA 90 bp | AGTCTCATTGACATACTAATTTCTCCCAGGATTCAATGCTGTTGCAAAGTAATACCTTGGTCCCAGCCTTaGAGAACCTCCAGTATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLIDILISPRIQCCCKVIPWSQP*RTSSMP Trigger: GGGCATACTGGAGGTTCTCAAAGGCTGGGACCAAGG...TATTACTTTGCAACAGCATTGAATCCTGGGAGAAATTAGTATGTCAATGAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS-3UTR CAA 90 bp | AAAAACAAGAAAGGCAAAGAGAAAAGCTTTGTTCAAAGGTGCTGCCTTTCCATTACGACTCGTGGGACCTaGGGCCATTTCGAATTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KNKKGKEKSFVQRCCLSITTRGT*GHFEFP Trigger: TGGAAATTCGAAATGGCCCAAGGTCCCACGAGTCGT...AATGGAAAGGCAGCACCTTTGAACAAAGCTTTTCTCTTTGCCTTTCTTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR CAA 90 bp | GACAACCGTTCCTGCCCAATAACTCACTGGAAAGATACGAACGATATTTACAAATCCAGGAGGTCAATGTaGAATATCAGTGTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DNRSCPITHWKDTNDIYKSRRSM*NISVLS Trigger: AGAGAGCACACTGATATTCAACATTGACCTCCTGGA...TTTGTAAATATCGTTCGTATCTTTCCAGTGAGTTATTGGGCAGGAACGGTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGTTCAAAGGTGCTGCCTTTCCATTAGAAATGAACGTGTATAAAATGGCATCCAGGAGGTCAATGTaGAATATCAGTGTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALFKGAAFPLEMNVYKMASRRSM*NISVLS Trigger: AGAGAGCACACTGATATTCAACATTGACCTCCTGGA...TGCCATTTTATACACGTTCATTTCTAATGGAAAGGCAGCACCTTTGAACAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000117375.2 |
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| CDS CCA 72 bp | GATGAATGGCTTCTGGAGAACTTCGATTTTCACTTCTaGCTCAGGAATCAGAGCTCCGCTCAGAACCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DEWLLENFDFHF*LRNQSSAQNRD Trigger: GTCACGGTTCTGAGCGGAGCTCTGATTCCTGAGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS CCA 72 bp | CCTCCCTTGGTCTTGCGATGGCAGATGAATGGCTTCTaGAGAACTTCGATTTTCACTTCTGGCTCAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: PPLVLRWQMNGF*RTSIFTSGSGI Trigger: GATTCCTGAGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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| CDS TCA 72 bp | ACATCAGATCCCCTCCCTTGGTCTTGCGATGGCAGATaGATGGCTTCTGGAGAACTTCGATTTTCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSDPLPWSCDGR*MASGELRFSLL Trigger: CAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGATCTGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046520.13 ENSMUST00000155047.6 |
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