Pregenerated sensors for FGG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033860Ensembl transcript IDs: ENSMUST00000048486.13, ENSMUST00000194175.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTaGGGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTT | + |
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Preference number: 1 (lower is better) Translates to: LMEFAPWIPLTLKMK*GPESPLSHRKNSIV Trigger: AACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACCTCACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| 3UTR-3UTR CAA 90 bp | AAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGGGTCCTGAAAGTCCATaGTCCCATAGGAAAAATAGT | + |
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Preference number: 3 (lower is better) Translates to: KTANGVCTMDPINSENEVGPESP*SHRKNS Trigger: ACTATTTTTCCTATGGGACAATGGACTTTCAGGACC...CACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| 3UTR TCA 72 bp | TTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTaGGGTCCTGAAAGTCCATTGTCCCATAGGAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: FAPWIPLTLKMK*GPESPLSHRKN Trigger: ATTTTTCCTATGGGACAATGGACTTTCAGGACCTCACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGCAAGGCTCCTGGCACTaGGCTTCAAGCTGGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: IASIKLLMEFAPWIPLTLQGSWH*ASSWAT Trigger: GGTAGCCCAGCTTGAAGCCCAGTGCCAGGAGCCTTG...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATACTCGGGACCCACCCTaGACATGGCATAGTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GPESPLSHRKNSIVLCLDTRDPP*TWHSPQ Trigger: CTGCGGACTATGCCATGTTCAGGGTGGGTCCCGAGT...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | GCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAACGTTGTCCCAGGTACTaGACTGCATGCCGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ASIKLLMEFAPWIPLTLKRCPRY*TACRCG Trigger: CCCACAACGGCATGCAGTTCAGTACCTGGGACAACG...TTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | ACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGAGGTTTGCACAGAGTCCTTaGAAGGCTCCTGGCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: TANGVCTMDPINSENEVRFAQSP*KAPGTG Trigger: CCCAGTGCCAGGAGCCTTGCAAGGACTCTGTGCAAA...CCTCACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATTCCTTGCAAGGCTCCTaGCACTGGGCTTCAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPESPLSHRKNSIVLCLDSLQGS*HWASSW Trigger: CCAGCTTGAAGCCCAGTGCCAGGAGCCTTGCAAGGA...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGTGCCGTTGTGGGATGTaGAAAACTTGTCACTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IASIKLLMEFAPWIPLTLCRCGM*KTCHWG Trigger: ACCCCAGTGACAAGTTTTTCACATCCCACAACGGCA...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAGGTGATAAACTCCATTaGGGTGGCCTGCGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: RQHKTANGVCTMDPINSEGDKLH*GGLRDI Trigger: AATGTCACGCAGGCCACCTCAATGGAGTTTATCACC...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | ACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGAGGTCTGGTAGCCACATATaGCAGGCCCGTTGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TANGVCTMDPINSENEVRSGSHI*QARWRE Trigger: TTCTCTCCAACGGGCCTGGCATATGTGGCTACCAGA...CCTCACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAACACTGGGCTTCAAGCTaGGCTACCTTCTGTTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQHKTANGVCTMDPINSEHWASS*ATFCFR Trigger: CCTAAAACAGAAGGTAGCCCAGCTTGAAGCCCAGTG...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | AAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGCGGCATCTCCACCAATaGAGTAGGCATAGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KTANGVCTMDPINSENEVRHLHQ*SRHRSG Trigger: GCCTGACCTATGCCTACTTCATTGGTGGAGATGCCG...CACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATTCCCAGGTACTGAACTaGATGCCGTTGTGGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: GPESPLSHRKNSIVLCLDSQVLN*MPLWDV Trigger: CACATCCCACAACGGCATGCAGTTCAGTACCTGGGA...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAATCCATTGAGGTGGCCTaGGTGACATTTGTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RQHKTANGVCTMDPINSESIEVA*VTFVHP Trigger: TGGATGAACAAATGTCACGCAGGCCACCTCAATGGA...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | ACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGAGGCATAGTCCGCAGTGCTaGTTCTGCCATTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TANGVCTMDPINSENEVRHSPQC*FCHSSL Trigger: AAGACTGGAATGGCAGAACCAGCACTGCGGACTATG...CCTCACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAACCTGTTCCGCACAGTTaGCTTCAAACTTATCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RQHKTANGVCTMDPINSEPVPHS*LQTYRC Trigger: ACAACGATAAGTTTGAAGGCAACTGTGCGGAACAGG...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGCTTTGGCGCCCTTGTTaGCAATTTCCTGACAATCTT | + |
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Preference number: 4 (lower is better) Translates to: IASIKLLMEFAPWIPLTLLWRPC*QFPDNL Trigger: AAGATTGTCAGGAAATTGCCAACAAGGGCGCCAAAG...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | GCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAATGCCATTCCAGTCTTTaGGCTGTATTCTCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ASIKLLMEFAPWIPLTLKCHSSL*AVFSVH Trigger: ATGCACTGAGAATACAGCTCAAAGACTGGAATGGCA...TTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATAGAAGACAGGAAATCTaGGATACCACAGGTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GPESPLSHRKNSIVLCLDRRQEI*DTTGGW Trigger: CCAACCACCTGTGGTATCGCAGATTTCCTGTCTTCT...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAAACCTGAATTGCTTTaGTCAGTTCTTTGGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQHKTANGVCTMDPINSEKPELL*SVLWLL Trigger: CAGAAGCCAAAGAACTGATCAAAGCAATTCAGGTTT...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGCAGTACACTAAGAACTaGTGCTTAGCTTTCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: IASIKLLMEFAPWIPLTLQYTKN*CLAFKG Trigger: ACCTTTGAAAGCTAAGCAGCAGTTCTTAGTGTACTG...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | GCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAGAGCTGTATTCTCAGTaGATATGGAATTGTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: ASIKLLMEFAPWIPLTLKELYSQ*IWNCGL Trigger: CAGTCCACAATTCCATATGCACTGAGAATACAGCTC...TTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAATATTCTCAGTGCATATaGAATTGTGGACTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: RQHKTANGVCTMDPINSEYSQCI*NCGLHA Trigger: AGCATGCAGTCCACAATTCCATATGCACTGAGAATA...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | GCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAGAATCCAGTTCTTCTTaGAATCCAAACTGCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: ASIKLLMEFAPWIPLTLKESSSS*NPNCHQ Trigger: TTGATGGCAGTTTGGATTTCAAGAAGAACTGGATTC...TTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR GCA 90 bp | ACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGAGGTACACTAAGAACTGCTaGTTAGCTTTCAAAGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: TANGVCTMDPINSENEVRYTKNC*LAFKGR Trigger: TCGACCTTTGAAAGCTAAGCAGCAGTTCTTAGTGTA...CCTCACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATAAAGTCCACTTTCTTTaGCGCCCTTGTTGGCAATTT | + |
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Preference number: 4 (lower is better) Translates to: GPESPLSHRKNSIVLCLDKVHFL*RPCWQF Trigger: AAATTGCCAACAAGGGCGCCAAAGAAAGTGGACTTT...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATAACTGCATGCCGTTGTaGGATGTGAAAAACTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GPESPLSHRKNSIVLCLDNCMPL*DVKNLS Trigger: TGACAAGTTTTTCACATCCCACAACGGCATGCAGTT...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR TCA 90 bp | AGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGTTGTTGGCAATTTCCTaGCAATCTTTTCCAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SIKLLMEFAPWIPLTLKMLLAIS*QSFPVV Trigger: CACAACTGGAAAAGATTGTCAGGAAATTGCCAACAA...CATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CCA 90 bp | AGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGGTGCATATGGAATTGTaGACTGCATGCTTATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SIKLLMEFAPWIPLTLKMVHMEL*TACLSN Trigger: ATTTGATAAGCATGCAGTCCACAATTCCATATGCAC...CATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS TCA 90 bp | AGTAGGCATAGGTCAGGCGGTATTTGTCAGACTCGGGACCCACCCTaGACATGGCATAGTCCGCAGTGCTGGTTCTGCCATTCCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SRHRSGGICQTRDPP*TWHSPQCWFCHSSL Trigger: AAGACTGGAATGGCAGAACCAGCACTGCGGACTATGCCATGTTCAGGGTGGGTCCCGAGTCTGACAAATACCGCCTGACCTATGCCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 90 bp | CCTGACAATCTTTTCCAGTTGTGTCATGGATTTGCACAGAGTCCTTaGAAGGCTCCTGGCACTGGGCTTCAAGCTGGGCTACCTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: PDNLFQLCHGFAQSP*KAPGTGLQAGLPSV Trigger: AACAGAAGGTAGCCCAGCTTGAAGCCCAGTGCCAGGAGCCTTGCAAGGACTCTGTGCAAATCCATGACACAACTGGAAAAGATTGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 90 bp | TCGGAGATCATTGTCCACGTCGGTTTGGTAAGAAGACAGGAAATCTaGGATACCACAGGTGGTTGGGCAGAAACTACCGAATCTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: SEIIVHVGLVRRQEI*DTTGGWAETTESLI Trigger: GATGAGAGATTCGGTAGTTTCTGCCCAACCACCTGTGGTATCGCAGATTTCCTGTCTTCTTACCAAACCGACGTGGACAATGATCTCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 90 bp | CAGTTGCCTTCAAACTTATCGTTGTCGTTGTCCCAGGTACTGAACTaGATGCCGTTGTGGGATGTGAAAAACTTGTCACTGGGGTCATCG | + |
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Preference number: 5 (lower is better) Translates to: QLPSNLSLSLSQVLN*MPLWDVKNLSLGSS Trigger: CGATGACCCCAGTGACAAGTTTTTCACATCCCACAACGGCATGCAGTTCAGTACCTGGGACAACGACAACGATAAGTTTGAAGGCAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS-3UTR CAA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAACCTGGCTTTGGGGGTaGGTCTGGGTTGTAGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: RQHKTANGVCTMDPINSETWLWG*VWVVVN Trigger: GTTTACTACAACCCAGACCAACCCCCAAAGCCAGGT...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CAA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGTGGGATGTGAAAAACTaGTCACTGGGGTCATCGCCG | + |
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Preference number: 5 (lower is better) Translates to: IASIKLLMEFAPWIPLTLWDVKN*SLGSSP Trigger: CGGCGATGACCCCAGTGACAAGTTTTTCACATCCCA...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS TCA 90 bp | CTGGCTTTGGGGGTTGGTCTGGGTTGTAGTAAACCTGAATTGCTTTaGTCAGTTCTTTGGCTTCTGTGGTTCTGTTTTCAGCCCGGAATA | + |
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Preference number: 5 (lower is better) Translates to: LALGVGLGCSKPELL*SVLWLLWFCFQPGI Trigger: TATTCCGGGCTGAAAACAGAACCACAGAAGCCAAAGAACTGATCAAAGCAATTCAGGTTTACTACAACCCAGACCAACCCCCAAAGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CCA 90 bp | ATTTGCACAGAGTCCTTGCAAGGCTCCTGGCACTGGGCTTCAAGCTaGGCTACCTTCTGTTTTAGGTTTGTGATCTTCTGGTTATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: ICTESLQGSWHWASS*ATFCFRFVIFWLFE Trigger: TTCAAATAACCAGAAGATCACAAACCTAAAACAGAAGGTAGCCCAGCTTGAAGCCCAGTGCCAGGAGCCTTGCAAGGACTCTGTGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS-3UTR CAA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGCTGAACTGCATGCCGTaGTGGGATGTGAAAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: IASIKLLMEFAPWIPLTLLNCMP*WDVKNL Trigger: CAAGTTTTTCACATCCCACAACGGCATGCAGTTCAG...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CAA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAACTTATCGTTGTCGTaGTCCCAGGTACTGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: RQHKTANGVCTMDPINSENLSLS*SQVLNC Trigger: GCAGTTCAGTACCTGGGACAACGACAACGATAAGTT...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CAA 90 bp | CGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAACCTTCAAACTTATCGTaGTCGTTGTCCCAGGTACTG | + |
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Preference number: 5 (lower is better) Translates to: RQHKTANGVCTMDPINSEPSNLS*SLSQVL Trigger: CAGTACCTGGGACAACGACAACGATAAGTTTGAAGG...TTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS-3UTR CAA 90 bp | ATCGCCAGCATAAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGTCCTGTTCCGCACAGTaGCCTTCAAACTTATCGTTG | + |
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Preference number: 5 (lower is better) Translates to: IASIKLLMEFAPWIPLTLSCSAQ*PSNLSL Trigger: CAACGATAAGTTTGAAGGCAACTGTGCGGAACAGGA...CAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTTATGCTGGCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS TCA 90 bp | TCTGTGGTGCCAGTAGGCGACAGGTGTCCAAATCCTTCTTTATACTaGATCCAGTTCTTCTTGAAATCCAAACTGCCATCAATCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SVVPVGDRCPNPSLY*IQFFLKSKLPSILF Trigger: GAAGAGGATTGATGGCAGTTTGGATTTCAAGAAGAACTGGATTCAGTATAAAGAAGGATTTGGACACCTGTCGCCTACTGGCACCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATCATATGCCAGGCCCGTaGGAGAGAACAGTAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: GPESPLSHRKNSIVLCLDHMPGP*ERTVKA Trigger: TGCTTTTACTGTTCTCTCCAACGGGCCTGGCATATG...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS TCA 90 bp | GCGACAGGTGTCCAAATCCTTCTTTATACTGAATCCAGTTCTTCTTaGAATCCAAACTGCCATCAATCCTCTTCTGCAATACGGTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: ATGVQILLYTESSSS*NPNCHQSSSAIRSN Trigger: GTTGGACCGTATTGCAGAAGAGGATTGATGGCAGTTTGGATTTCAAGAAGAACTGGATTCAGTATAAAGAAGGATTTGGACACCTGTCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTGAAAGTCCATTGTCCCATAGGAAAAATAGTATAGTTCTCTGCTTGGATAGTTGTGTCATGGATTaGCACAGAGTCCTTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: GPESPLSHRKNSIVLCLDSCVMD*HRVLAR Trigger: CCTTGCAAGGACTCTGTGCAAATCCATGACACAACT...ATCCAAGCAGAGAACTATACTATTTTTCCTATGGGACAATGGACTTTCAGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS CCA 90 bp | GCTGGTTCTGCCATTCCAGTCTTTGAGCTGTATTCTCAGTGCATATaGAATTGTGGACTGCATGCTTATCAAATGAATCTTCTCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: AGSAIPVFELYSQCI*NCGLHAYQMNLLIS Trigger: GGAAATGAGAAGATTCATTTGATAAGCATGCAGTCCACAATTCCATATGCACTGAGAATACAGCTCAAAGACTGGAATGGCAGAACCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS-3UTR CAA 90 bp | AAAACTGCTAATGGAGTTTGCACCATGGATCCCATTAACTCTGAAAATGAAGTGATTGTCCACGTCGGTTaGGTAAGAAGACAGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: KTANGVCTMDPINSENEVIVHVG*VRRQEI Trigger: GATTTCCTGTCTTCTTACCAAACCGACGTGGACAAT...CACTTCATTTTCAGAGTTAATGGGATCCATGGTGCAAACTCCATTAGCAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048486.13 |
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| CDS TCA 72 bp | AGGTCAGGCGGTATTTGTCAGACTCGGGACCCACCCTaGACATGGCATAGTCCGCAGTGCTGGTTCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RSGGICQTRDPP*TWHSPQCWFCH Trigger: ATGGCAGAACCAGCACTGCGGACTATGCCATGTTCAGGGTGGGTCCCGAGTCTGACAAATACCGCCTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 72 bp | CTTTTCCAGTTGTGTCATGGATTTGCACAGAGTCCTTaGAAGGCTCCTGGCACTGGGCTTCAAGCTGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: LFQLCHGFAQSP*KAPGTGLQAGL Trigger: TAGCCCAGCTTGAAGCCCAGTGCCAGGAGCCTTGCAAGGACTCTGTGCAAATCCATGACACAACTGGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CCA 72 bp | GAGTCCTTGCAAGGCTCCTGGCACTGGGCTTCAAGCTaGGCTACCTTCTGTTTTAGGTTTGTGATCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ESLQGSWHWASS*ATFCFRFVIFW Trigger: CCAGAAGATCACAAACCTAAAACAGAAGGTAGCCCAGCTTGAAGCCCAGTGCCAGGAGCCTTGCAAGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 72 bp | TCTTTTCCAGTTGTGTCATGGATTTGCACAGAGTCCTaGCAAGGCTCCTGGCACTGGGCTTCAAGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFPVVSWICTES*QGSWHWASSWA Trigger: AGCCCAGCTTGAAGCCCAGTGCCAGGAGCCTTGCAAGGACTCTGTGCAAATCCATGACACAACTGGAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 72 bp | AGTACCACCTTGGTGATAAACTCCATTGAGGTGGCCTaGGTGACATTTGTTCATCCACCAGCCGGATCCATC | + |
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Preference number: 6 (lower is better) Translates to: STTLVINSIEVA*VTFVHPPAGSI Trigger: GATGGATCCGGCTGGTGGATGAACAAATGTCACGCAGGCCACCTCAATGGAGTTTATCACCAAGGTGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 72 bp | TCGTTGTCGTTGTCCCAGGTACTGAACTGCATGCCGTaGTGGGATGTGAAAAACTTGTCACTGGGGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: SLSLSQVLNCMP*WDVKNLSLGSS Trigger: CGATGACCCCAGTGACAAGTTTTTCACATCCCACAACGGCATGCAGTTCAGTACCTGGGACAACGACAACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 72 bp | TTCATCCACCAGCCGGATCCATCCTGTTCCGCACAGTaGCCTTCAAACTTATCGTTGTCGTTGTCCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: FIHQPDPSCSAQ*PSNLSLSLSQV Trigger: TACCTGGGACAACGACAACGATAAGTTTGAAGGCAACTGTGCGGAACAGGATGGATCCGGCTGGTGGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 72 bp | GTCTTCCAGCGTTCGGAGATCATTGTCCACGTCGGTTaGGTAAGAAGACAGGAAATCTGCGATACCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: VFQRSEIIVHVG*VRRQEICDTTG Trigger: ACCTGTGGTATCGCAGATTTCCTGTCTTCTTACCAAACCGACGTGGACAATGATCTCCGAACGCTGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 72 bp | TGTTCCGCACAGTTGCCTTCAAACTTATCGTTGTCGTaGTCCCAGGTACTGAACTGCATGCCGTTGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: CSAQLPSNLSLS*SQVLNCMPLWD Trigger: ATCCCACAACGGCATGCAGTTCAGTACCTGGGACAACGACAACGATAAGTTTGAAGGCAACTGTGCGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 90 bp | TCAAACTTATCGTTGTCGTTGTCCCAGGTACTGAACTGCATGCCGTaGTGGGATGTGAAAAACTTGTCACTGGGGTCATCGCCGAAATCG | + |
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Preference number: 6 (lower is better) Translates to: SNLSLSLSQVLNCMP*WDVKNLSLGSSPKS Trigger: CGATTTCGGCGATGACCCCAGTGACAAGTTTTTCACATCCCACAACGGCATGCAGTTCAGTACCTGGGACAACGACAACGATAAGTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 90 bp | GATCCATCCTGTTCCGCACAGTTGCCTTCAAACTTATCGTTGTCGTaGTCCCAGGTACTGAACTGCATGCCGTTGTGGGATGTGAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: DPSCSAQLPSNLSLS*SQVLNCMPLWDVKN Trigger: GTTTTTCACATCCCACAACGGCATGCAGTTCAGTACCTGGGACAACGACAACGATAAGTTTGAAGGCAACTGTGCGGAACAGGATGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 72 bp | ATTGTCCACGTCGGTTTGGTAAGAAGACAGGAAATCTaGGATACCACAGGTGGTTGGGCAGAAACTACCGAA | + |
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Preference number: 6 (lower is better) Translates to: IVHVGLVRRQEI*DTTGGWAETTE Trigger: TTCGGTAGTTTCTGCCCAACCACCTGTGGTATCGCAGATTTCCTGTCTTCTTACCAAACCGACGTGGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CCA 72 bp | AGACTTCTGAGTGGCACTGTCTATCATACCTGGCTTTaGGGGTTGGTCTGGGTTGTAGTAAACCTGAATTGC | + |
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Preference number: 6 (lower is better) Translates to: RLLSGTVYHTWL*GLVWVVVNLNC Trigger: GCAATTCAGGTTTACTACAACCCAGACCAACCCCCAAAGCCAGGTATGATAGACAGTGCCACTCAGAAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CCA 72 bp | CTTCTTAGACTTCTGAGTGGCACTGTCTATCATACCTaGCTTTGGGGGTTGGTCTGGGTTGTAGTAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: LLRLLSGTVYHT*LWGLVWVVVNL Trigger: CAGGTTTACTACAACCCAGACCAACCCCCAAAGCCAGGTATGATAGACAGTGCCACTCAGAAGTCTAAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS TCA 72 bp | ATTTTGAGTAAGTACCACCTTGGTGATAAACTCCATTaGGGTGGCCTGCGTGACATTTGTTCATCCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ILSKYHLGDKLH*GGLRDICSSTS Trigger: GCTGGTGGATGAACAAATGTCACGCAGGCCACCTCAATGGAGTTTATCACCAAGGTGGTACTTACTCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 72 bp | TCAAACTTATCGTTGTCGTTGTCCCAGGTACTGAACTaGATGCCGTTGTGGGATGTGAAAAACTTGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: SNLSLSLSQVLN*MPLWDVKNLSL Trigger: CAGTGACAAGTTTTTCACATCCCACAACGGCATGCAGTTCAGTACCTGGGACAACGACAACGATAAGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS TCA 72 bp | AGTCCACTTTCTTTGGCGCCCTTGTTGGCAATTTCCTaGCAATCTTTTCCAGTTGTGTCATGGATTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: SPLSLAPLLAIS*QSFPVVSWICT Trigger: TGTGCAAATCCATGACACAACTGGAAAAGATTGTCAGGAAATTGCCAACAAGGGCGCCAAAGAAAGTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CCA 72 bp | GCCATTCCAGTCTTTGAGCTGTATTCTCAGTGCATATaGAATTGTGGACTGCATGCTTATCAAATGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: AIPVFELYSQCI*NCGLHAYQMNL Trigger: AAGATTCATTTGATAAGCATGCAGTCCACAATTCCATATGCACTGAGAATACAGCTCAAAGACTGGAATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS GCA 72 bp | GGTTATTTGAATTATAGATTTCCTGTAAATACCGAATaGTTGTCTCGTGGGTTAACAGCAGCGCTTCGTATT | + |
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Preference number: 6 (lower is better) Translates to: GYLNYRFPVNTE*LSRGLTAALRI Trigger: AATACGAAGCGCTGCTGTTAACCCACGAGACAAGCATTCGGTATTTACAGGAAATCTATAATTCAAATAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS TCA 72 bp | GTCCAAATCCTTCTTTATACTGAATCCAGTTCTTCTTaGAATCCAAACTGCCATCAATCCTCTTCTGCAATA | + |
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Preference number: 6 (lower is better) Translates to: VQILLYTESSSS*NPNCHQSSSAI Trigger: TATTGCAGAAGAGGATTGATGGCAGTTTGGATTTCAAGAAGAACTGGATTCAGTATAAAGAAGGATTTGGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 72 bp | TATTTGAATTATAGATTTCCTGTAAATACCGAATGCTaGTCTCGTGGGTTAACAGCAGCGCTTCGTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: YLNYRFPVNTEC*SRGLTAALRIS Trigger: TGAAATACGAAGCGCTGCTGTTAACCCACGAGACAAGCATTCGGTATTTACAGGAAATCTATAATTCAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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| CDS CAA 90 bp | TCTTCTGGTTATTTGAATTATAGATTTCCTGTAAATACCGAATGCTaGTCTCGTGGGTTAACAGCAGCGCTTCGTATTTCACAATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSGYLNYRFPVNTEC*SRGLTAALRISQFL Trigger: AAGAAATTGTGAAATACGAAGCGCTGCTGTTAACCCACGAGACAAGCATTCGGTATTTACAGGAAATCTATAATTCAAATAACCAGAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048486.13 ENSMUST00000194175.2 |
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