Pregenerated sensors for FGF22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020327Ensembl transcript IDs: ENSMUST00000020577.4, ENSMUST00000219228.2, ENSMUST00000219981.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGCCATGTCTCCATGCCCGGCAGCCAGCGGGCGCCCGGCTTGTaGCATAAAGACTCGTGTTGGCCCAGGGTCTCTGGCCTGGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PCHVSMPGSQRAPGL*HKDSCWPRVSGLAL Trigger: AAGGGCCAGGCCAGAGACCCTGGGCCAACACGAGTCTTTATGTCACAAGCCGGGCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR GCA 90 bp | TGCAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTTCACTTaGAGGGACCCTGCCATGTCTCCATGCCCGGCAGCCAGCGGGCGC | + |
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Preference number: 1 (lower is better) Translates to: CKLPVLCIPLSAGFT*RDPAMSPCPAASGR Trigger: GCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGGGTCCCTGCAAGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR TCA 90 bp | GTTCAGCTCCGGATCTTCCAGGCCCTGTGTGCCGCCCATGCCTCCTaGACCATTGGCAGGCCCTTCAAGACGAGACCAAGACTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VQLRIFQALCAAHAS*TIGRPFKTRPRLAG Trigger: TCCTGCCAGTCTTGGTCTCGTCTTGAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCGGAGCTGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR GCA 90 bp | GCGTCTTCCTTCAGCCAGGGTGTCCATGACTGCATGGTGGGGCAGTaGACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATGGAACCC | + |
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Preference number: 1 (lower is better) Translates to: ASSFSQGVHDCMVGQ*TGWVGASGKGLMEP Trigger: GGGTTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAGTCATGGACACCCTGGCTGAAGGAAGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR CCA 90 bp | CCGGATCTTCCAGGCCCTGTGTGCCGCCCATGCCTCCTGAACCATTaGCAGGCCCTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PDLPGPVCRPCLLNH*QALQDETKTGRKCV Trigger: CACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR CCA 90 bp | GCCCTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGTGGACAGTTaGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ALQDETKTGRKCVDS*CRRVRLPCLGMPWL Trigger: CAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR GCA 90 bp | CTTGGTTGTTCAGCTCCGGATCTTCCAGGCCCTGTGTGCCGCCCATaGCTCCTGAACCATTGGCAGGCCCTTCAAGACGAGACCAAGACT | + |
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Preference number: 1 (lower is better) Translates to: LGCSAPDLPGPVCRP*LLNHWQALQDETKT Trigger: AGTCTTGGTCTCGTCTTGAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCGGAGCTGAACAACCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR CCA 90 bp | ACTAGATGGATGCAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTaGCTTCACTTGCAGGGACCCTGCCATGTCTCCATGCCCGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: TRWMQTASSVYPPER*LHLQGPCHVSMPGS Trigger: GCTGCCGGGCATGGAGACATGGCAGGGTCCCTGCAAGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCATCCATCTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR CCA 90 bp | ATTGGCAGGCCCTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGTaGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGC | + |
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Preference number: 1 (lower is better) Translates to: IGRPFKTRPRLAGSV*TVGAVVSVCLAWEC Trigger: GCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAGGGCCTGCCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR GCA 90 bp | TCTCCGTGCTGTGCCCAGAGTGTTCTCATCTCCAAACTAGATGGATaGAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: SPCCAQSVLISKLDG*KLPVLCIPLSAGFT Trigger: AGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCATCCATCTAGTTTGGAGATGAGAACACTCTGGGCACAGCACGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR CCA 90 bp | AACCTCTCCGTGCTGTGCCCAGAGTGTTCTCATCTCCAAACTAGATaGATGCAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: NLSVLCPECSHLQTR*MQTASSVYPPERWL Trigger: AAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCATCCATCTAGTTTGGAGATGAGAACACTCTGGGCACAGCACGGAGAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR TCA 90 bp | CCCACACACTTGTCTTTGGTTCAAGTGATGGACTTGCAGCATGTATaGCGGCAGGCCTACATACGCCACGCCAGTATTACCATGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: PTHLSLVQVMDLQHV*RQAYIRHASITMAE Trigger: CTCAGCCATGGTAATACTGGCGTGGCGTATGTAGGCCTGCCGTCATACATGCTGCAAGTCCATCACTTGAACCAAAGACAAGTGTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR GCA 90 bp | TTTCCTCATCCACCTGGTGTGTGTTCCCACCTCCAAACCTCTCCGTaGTGTGCCCAGAGTGTTCTCATCTCCAAACTAGATGGATGCAAA | + |
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Preference number: 1 (lower is better) Translates to: FPHPPGVCSHLQTSP*CAQSVLISKLDGCK Trigger: TTTGCATCCATCTAGTTTGGAGATGAGAACACTCTGGGCACAGCACGGAGAGGTTTGGAGGTGGGAACACACACCAGGTGGATGAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR GCA 90 bp | ACCAGAGCATCCATTCTGAAAGCTCTTAGCACAGGGTGTGTGTCCTaGCTCCAACAAGCAACCATGCACACCCAGGCTCAAAACATTTAT | + |
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Preference number: 1 (lower is better) Translates to: TRASILKALSTGCVS*LQQATMHTQAQNIY Trigger: ATAAATGTTTTGAGCCTGGGTGTGCATGGTTGCTTGTTGGAGGCAGGACACACACCCTGTGCTAAGAGCTTTCAGAATGGATGCTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTGCAGGGACCCTGCCATGTCTCCATGCCCGGCAGCCAGCGGGCGCCCGGCCCTGCCATGTCTCCATaGCCGGCAGCCAGCGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: HLQGPCHVSMPGSQRAPGPAMSP*PAASGR Trigger: GCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGG...GCCGGGCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGGGTCCCTGCAAGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGCCATGTCTCCATGCCCGGCAGCCAGCGGGCGCCCGGCTTGTGACATACTGGCAGGAAGTGTGTaGACAGTTGGTGCCGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: DPAMSPCPAASGRPACDILAGSV*TVGAVV Trigger: CACGACGGCACCAACTGTCCACACACTTCCTGCCAG...TATGTCACAAGCCGGGCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR CAA 90 bp | ATGCAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTTCACTaGCAGGGACCCTGCCATGTCTCCATGCCCGGCAGCCAGCGGGCG | + |
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Preference number: 2 (lower is better) Translates to: MQTASSVYPPERWLH*QGPCHVSMPGSQRA Trigger: CGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGGGTCCCTGCAAGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR TCA 90 bp | CACACGAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGGGGCCCTGCCCTCCGTaGCATGTCCACCCTCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: HTSASACREQKRESDPLGGPCPP*HVHPPR Trigger: CCGGGGAGGGTGGACATGTCACGGAGGGCAGGGCCC...CCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGTGTG 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATTGGGAAGCTGCCTGGTaGAGCCCTGCAGCGGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LHGGAVHRVGWSFWQRPDWEAAW*SPAAGD Trigger: GTCACCCGCTGCAGGGCTGCACCAGGCAGCTTCCCA...ATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR TCA 90 bp | ACACGAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGCCCTGCCCTCCGTaGCATGTCCACCCTCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: TRVQVPAENRKGSQILWGGPCPP*HVHPPR Trigger: CCGGGGAGGGTGGACATGTCACGGAGGGCAGGGCCC...ACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCTGCCTGCTTTCCTCATCCACCTGGTGTGTGTTCCCACCTCCAAACCTCGCCGCCCATGCCTCCTaGACCATTGGCAGGCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PPCLLSSSTWCVFPPPNLAAHAS*TIGRPF Trigger: GAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGC...GAGGTTTGGAGGTGGGAACACACACCAGGTGGATGAGGAAAGCAGGCAGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGGTGTCCATGACTGCATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTCCAGGGTCTCTGGCCTaGCCCTTGGTTGTTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SQGVHDCMVGQCTGWVGAPGSLA*PLVVQL Trigger: GAGCTGAACAACCAAGGGCCAGGCCAGAGACCCTGG...AGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAGTCATGGACACCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR CAA 90 bp | TGTGACATAAAGACTCGTGTTGGCCCAGGGTCTCTGGCCTGGCCCTaGGTTGTTCAGCTCCGGATCTTCCAGGCCCTGTGTGCCGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CDIKTRVGPGSLAWP*VVQLRIFQALCAAH Trigger: ATGGGCGGCACACAGGGCCTGGAAGATCCGGAGCTGAACAACCAAGGGCCAGGCCAGAGACCCTGGGCCAACACGAGTCTTTATGTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR CAA 90 bp | GGAGCTTCTGGCAAAGGCCTGATGGAACCCAGCCCTCTGCAGTGGTaGGTAGGAGGCAAGACCGGAAGACTTCATCCAGAGCTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GASGKGLMEPSPLQW*VGGKTGRLHPELLG Trigger: CCCCAGCAGCTCTGGATGAAGTCTTCCGGTCTTGCCTCCTACCAACCACTGCAGAGGGCTGGGTTCCATCAGGCCTTTGCCAGAAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR CAA 90 bp | GGCCCTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGTGGACAGTaGGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GPSRRDQDWQEVCGQ*VPSCPSALPGNALA Trigger: AGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR CAA 90 bp | TCCGGATCTTCCAGGCCCTGTGTGCCGCCCATGCCTCCTGAACCATaGGCAGGCCCTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SGSSRPCVPPMPPEP*AGPSRRDQDWQEVC Trigger: ACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGCTTCCAGGCCCTGTGTaGCGCCCATGCCTCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: RVQVPAENRKGSQILWGGLPGPV*RPCLLN Trigger: GTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAG...CCCACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGAGATATGCCTGCCATGTCTCCATaGCCGGCAGCCAGCGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: KCLQRTEKGVRSSGVGDMPAMSP*PAASGR Trigger: GCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGG...CATATCTCCCACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATGGAACCGGTCCTCCCTGCCTaGTTTCCTCATCCACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: MVGQCTGWVGASGKGLMEPVLPA*FPHPPG Trigger: ACCAGGTGGATGAGGAAAGCAGGCAGGGAGGACCGG...TTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAGACCGGAAGACTTCATCCAGAGCTGCTGGGGTGGGAAGCTGCCTGGTGCATACCCACAGGTGCTGTaGAGACTGCCGTTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ARPEDFIQSCWGGKLPGAYPQVL*RLPFPG Trigger: TCCAGGGAACGGCAGTCTGCACAGCACCTGTGGGTA...TGCACCAGGCAGCTTCCCACCCCAGCAGCTCTGGATGAAGTCTTCCGGTCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGAAGACTTCATCCAGAGCTGCTGGGGTGGGAAGCTGCCTGGTGCAGCCCTGGTTCCCTGGAGATGCTaGAGTGATAGCCTTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PEDFIQSCWGGKLPGAALVPWRC*SDSLGL Trigger: AAGGCCAAGGCTATCACTCCAGCATCTCCAGGGAAC...CAGGGCTGCACCAGGCAGCTTCCCACCCCAGCAGCTCTGGATGAAGTCTTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATGGAACCCAGCCCTCTGCAGTaGTTGGTAGGAGGCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: MVGQCTGWVGASGKGLMEPSPLQ*LVGGKT Trigger: GGTCTTGCCTCCTACCAACCACTGCAGAGGGCTGGG...TTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGGGTGTCCATGACTGCATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTAGCCACATCCCACCCTaGAAGTCTGTAGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SQGVHDCMVGQCTGWVGASHIPP*KSVAER Trigger: CCTTTCTGCTACAGACTTTCAGGGTGGGATGTGGCT...AGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAGTCATGGACACCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR GCA 90 bp | TGGATGCAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTTCACTTGCAGCTTCCAGGCCCTGTGTaGCGCCCATGCCTCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: WMQTASSVYPPERWLHLQLPGPV*RPCLLN Trigger: GTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAG...CTGCAAGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGACCAGGGTCTCTGGCCTaGCCCTTGGTTGTTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ECKCLQRTEKGVRSSGVGPGSLA*PLVVQL Trigger: GAGCTGAACAACCAAGGGCCAGGCCAGAGACCCTGG...TCCCACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGATTGGCCCAGGGTCTCTaGCCTGGCCCTTGGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: ECKCLQRTEKGVRSSGVGLAQGL*PGPWLF Trigger: GAACAACCAAGGGCCAGGCCAGAGACCCTGGGCCAA...TCCCACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR CAA 90 bp | GTGCTGTGCAGACTGCCGTTCCCTGGAGATGCTGGAGTGATAGCCTaGGCCTTCCCTGGCAAGGACCAGAGCATCCATTCTGAAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VLCRLPFPGDAGVIA*AFPGKDQSIHSESS Trigger: AGAGCTTTCAGAATGGATGCTCTGGTCCTTGCCAGGGAAGGCCAAGGCTATCACTCCAGCATCTCCAGGGAACGGCAGTCTGCACAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR GCA 90 bp | ACACGAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTCCGGTCCTCCCTGCCTaGTTTCCTCATCCACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TRVQVPAENRKGSQILWGPVLPA*FPHPPG Trigger: ACCAGGTGGATGAGGAAAGCAGGCAGGGAGGACCGG...ACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCTTGGCCCAGGGTCTCTaGCCTGGCCCTTGGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RTKLRPLGRARSALNSSPLAQGL*PGPWLF Trigger: GAACAACCAAGGGCCAGGCCAGAGACCCTGGGCCAA...GGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATGGAAAGCAATGCTATGACCTaGCCATCCTGTCCTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: MVGQCTGWVGASGKGLMESNAMT*PSCPQV Trigger: AACTTGAGGACAGGATGGGCAGGTCATAGCATTGCT...TTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGAGATATGACGAGTGCAAGTGCCTaGAGAGAACAGAAAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KCLQRTEKGVRSSGVGDMTSASA*REQKRE Trigger: CTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGT...CATATCTCCCACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCAAGCTTCGGCCACATGTCCAAACTAGATGGATaGAAACTGCCAGTTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PLEEQEVLLTPAPSFGHMSKLDG*KLPVLC Trigger: ACACAGAACTGGCAGTTTGCATCCATCTAGTTTGGA...CATGTGGCCGAAGCTTGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR GCA 90 bp | ACACGAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTTTAAATGTGTATAGGTaGAGGGTATGTGCACACGAG | + |
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Preference number: 2 (lower is better) Translates to: TRVQVPAENRKGSQILWGLNVYR*RVCAHE Trigger: CTCGTGTGCACATACCCTGCACCTATACACATTTAA...ACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCCTGATGTGGGAGAACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCATCTCCAAACTAGATaGATGCAAACTGCCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: EQPDVGELNSGPLEEQEVHLQTR*MQTASS Trigger: AGAACTGGCAGTTTGCATCCATCTAGTTTGGAGATG...CACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTCTCCCACATCAGGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTCACTTGCAGGGACCCTGCCATGTCTCCATGCCCGGCAGCCAGCGGGCGCCGAGCGCTGGCTTCACTaGCAGGGACCCTGCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: ASLAGTLPCLHARQPAGAERWLH*QGPCHV Trigger: GACATGGCAGGGTCCCTGCAAGTGAAGCCAGCGCTC...GGCGCCCGCTGGCTGCCGGGCATGGAGACATGGCAGGGTCCCTGCAAGTGAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR GCA 72 bp | CTTCATCCAGAGCTGCTGGGGTGGGAAGCTGCCTGGTaGAGCCCTGCAGCGGGTGACCAGGCAGTGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LHPELLGWEAAW*SPAAGDQAVGL Trigger: CAGGCCCACTGCCTGGTCACCCGCTGCAGGGCTGCACCAGGCAGCTTCCCACCCCAGCAGCTCTGGATGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR GCA 72 bp | TCAGCTCCGGATCTTCCAGGCCCTGTGTGCCGCCCATaGCTCCTGAACCATTGGCAGGCCCTTCAAGACGAG | + |
|
Preference number: 3 (lower is better) Translates to: SAPDLPGPVCRP*LLNHWQALQDE Trigger: CTCGTCTTGAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCGGAGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| 3UTR CCA 72 bp | CATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTaGCAAAGGCCTGATGGAACCCAGCCCTCTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HGGAVHRVGWSF*QRPDGTQPSAV Trigger: CACTGCAGAGGGCTGGGTTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR TCA 72 bp | CGGATCTTCCAGGCCCTGTGTGCCGCCCATGCCTCCTaGACCATTGGCAGGCCCTTCAAGACGAGACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RIFQALCAAHAS*TIGRPFKTRPR Trigger: TCTTGGTCTCGTCTTGAAGGGCCTGCCAATGGTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| 3UTR GCA 72 bp | TTCAGCCAGGGTGTCCATGACTGCATGGTGGGGCAGTaGACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSQGVHDCMVGQ*TGWVGASGKGL Trigger: CAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAGTCATGGACACCCTGGCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR CCA 72 bp | GGTGTCCATGACTGCATGGTGGGGCAGTGCACAGGGTaGGTTGGAGCTTCTGGCAAAGGCCTGATGGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: GVHDCMVGQCTG*VGASGKGLMEP Trigger: GGGTTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAGTCATGGACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR CCA 72 bp | TGGCGTCTTCCTTCAGCCAGGGTGTCCATGACTGCATaGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WRLPSARVSMTA*WGSAQGGLELL Trigger: CAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCATGCAGTCATGGACACCCTGGCTGAAGGAAGACGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR GCA 72 bp | GAGACCAAGACTGGCAGGAAGTGTGTGGACAGTTGGTaGCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ETKTGRKCVDSW*RRVRLPCLGMP Trigger: AGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| 3UTR CCA 72 bp | GACGAGACCAAGACTGGCAGGAAGTGTGTGGACAGTTaGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: DETKTGRKCVDS*CRRVRLPCLGM Trigger: CATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| 3UTR CCA 72 bp | CCCTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGTaGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFKTRPRLAGSV*TVGAVVSVCLA Trigger: GGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCAAGCGAGCGCTGGCTTCACTaGCAGGGACCCTGCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNSGPLEEQEVLLTPAPSERWLH*QGPCHV Trigger: GACATGGCAGGGTCCCTGCAAGTGAAGCCAGCGCTC...GCTTGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR TCA 72 bp | CTTGGCCTTCCCTGGCAAGGACCAGAGCATCCATTCTaGAAGCTCTTAGCACAGGGTGTGTGTCCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGLPWQGPEHPF*KLLAQGVCPAS Trigger: GGAGGCAGGACACACACCCTGTGCTAAGAGCTTTCAGAATGGATGCTCTGGTCCTTGCCAGGGAAGGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR CCA 72 bp | TCTGGCAAAGGCCTGATGGAACCCAGCCCTCTGCAGTaGTTGGTAGGAGGCAAGACCGGAAGACTTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGKGLMEPSPLQ*LVGGKTGRLHP Trigger: TGGATGAAGTCTTCCGGTCTTGCCTCCTACCAACCACTGCAGAGGGCTGGGTTCCATCAGGCCTTTGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAGTGTTCAGAGGCCCCACATCAGCCTGGTGGTGCACATCTTTAGTCCTGATTCTCTGGCCTGGCCCTaGGTTGTTCAGCTCCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: HSVQRPHISLVVHIFSPDSLAWP*VVQLRI Trigger: GATCCGGAGCTGAACAACCAAGGGCCAGGCCAGAGA...ATCAGGACTAAAGATGTGCACCACCAGGCTGATGTGGGGCCTCTGAACACTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCAAGTCTCTGGCCTGGCCCTaGGTTGTTCAGCTCCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: TKLRPLGRARSALNSSPKSLAWP*VVQLRI Trigger: GATCCGGAGCTGAACAACCAAGGGCCAGGCCAGAGA...CTTGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR TCA 72 bp | GCTGTCCCTTCCAGTGACTCCAGGGAACTCAGGCATTaGACACATAGTGTTCAGAGGCCCCACATCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AVPSSDSRELRH*THSVQRPHISL Trigger: CAGGCTGATGTGGGGCCTCTGAACACTATGTGTTCAATGCCTGAGTTCCCTGGAGTCACTGGAAGGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR GCA 72 bp | CCACCTGGTGTGTGTTCCCACCTCCAAACCTCTCCGTaGTGTGCCCAGAGTGTTCTCATCTCCAAACTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PPGVCSHLQTSP*CAQSVLISKLD Trigger: ATCTAGTTTGGAGATGAGAACACTCTGGGCACAGCACGGAGAGGTTTGGAGGTGGGAACACACACCAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATGGAATCTCATCCCACACACTaGTCTTTGGTTCAAGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: MVGQCTGWVGASGKGLMESHPTH*SLVQVM Trigger: CATCACTTGAACCAAAGACAAGTGTGTGGGATGAGA...TTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR TCA 72 bp | GCAACCATGCACACCCAGGCTCAAAACATTTATTGTTaGTGGCCACCTGACACTAGCCTCCTCAGGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ATMHTQAQNIYC*WPPDTSLLRLS Trigger: GGACAGCCTGAGGAGGCTAGTGTCAGGTGGCCATCAACAATAAATGTTTTGAGCCTGGGTGTGCATGGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR GCA 72 bp | TGGTGTGTGTTCCCACCTCCAAACCTCTCCGTGCTGTaGCCAGAGTGTTCTCATCTCCAAACTAGATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: WCVFPPPNLSVL*PECSHLQTRWM Trigger: CATCCATCTAGTTTGGAGATGAGAACACTCTGGGCACAGCACGGAGAGGTTTGGAGGTGGGAACACACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR GCA 72 bp | TCCATTCTGAAAGCTCTTAGCACAGGGTGTGTGTCCTaGCTCCAACAAGCAACCATGCACACCCAGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SILKALSTGCVS*LQQATMHTQAQ Trigger: TTGAGCCTGGGTGTGCATGGTTGCTTGTTGGAGGCAGGACACACACCCTGTGCTAAGAGCTTTCAGAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR GCA 72 bp | GTGTATAGGTGCAGGGTATGTGCACACGAGTGCAAGTaGCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VYRCRVCAHECK*LQRTEKGVRSS Trigger: AGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGTGTGCACATACCCTGCACCTATACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR GCA 72 bp | CACATAGTGTTCAGAGGCCCCACATCAGCCTGGTGGTaGACATCTTTAGTCCTGATACTTAGGGAGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HIVFRGPTSAWW*TSLVLILREQR Trigger: TCTCTGCTCCCTAAGTATCAGGACTAAAGATGTGCACCACCAGGCTGATGTGGGGCCTCTGAACACTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR GCA 72 bp | GCACAGGGTGTGTGTCCTGCCTCCAACAAGCAACCATaGACACCCAGGCTCAAAACATTTATTGTTGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: AQGVCPASNKQP*TPRLKTFIVDG Trigger: GCCATCAACAATAAATGTTTTGAGCCTGGGTGTGCATGGTTGCTTGTTGGAGGCAGGACACACACCCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR CCA 72 bp | GTGCTGTGCCCAGAGTGTTCTCATCTCCAAACTAGATaGATGCAAACTGCCAGTTCTGTGTATCCCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLCPECSHLQTR*MQTASSVYPPE Trigger: CTCAGGGGGATACACAGAACTGGCAGTTTGCATCCATCTAGTTTGGAGATGAGAACACTCTGGGCACAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR TCA 72 bp | TTGTCTTTGGTTCAAGTGATGGACTTGCAGCATGTATaGCGGCAGGCCTACATACGCCACGCCAGTATTACC | + |
|
Preference number: 3 (lower is better) Translates to: LSLVQVMDLQHV*RQAYIRHASIT Trigger: GGTAATACTGGCGTGGCGTATGTAGGCCTGCCGTCATACATGCTGCAAGTCCATCACTTGAACCAAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR CAA 72 bp | GCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTTCACTaGCAGGGACCCTGCCATGTCTCCATGCCCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSVYPPERWLH*QGPCHVSMPGS Trigger: GCTGCCGGGCATGGAGACATGGCAGGGTCCCTGCAAGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTGCCTGCTTTCCTCATCCACCTGGTGTGTGTTCCCACCTCCAAACCTCACGTCGCCCTCCAGATaGGGGTACCCTCCCGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPCLLSSSTWCVFPPPNLTSPSR*GYPPGA Trigger: CGCTCCGGGAGGGTACCCGCATCTGGAGGGCGACGT...GAGGTTTGGAGGTGGGAACACACACCAGGTGGATGAGGAAAGCAGGCAGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGTGTGTGTTCCCACCTCCAAACCTCTCCGTGCTGTGCCCAGAGTGTTCTATACTGTCCTGGCCGTaGCGCCAACGCGTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TWCVFPPPNLSVLCPECSILSWP*RQRVPC Trigger: GCAGGGGACGCGTTGGCGGCACGGCCAGGACAGTAT...AGAACACTCTGGGCACAGCACGGAGAGGTTTGGAGGTGGGAACACACACCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGATGTGGGAGAACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCACGTCGCCCTCCAGATaGGGGTACCCTCCCGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPDVGELNSGPLEEQEVLTSPSR*GYPPGA Trigger: CGCTCCGGGAGGGTACCCGCATCTGGAGGGCGACGT...GAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTCTCCCACATCAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTTCAGCTCCGGATCTTCCAGGCCCTGTGTGCCGCCCATGCCTCCTGAACTCCGTCTGCCTTGCCTaGGAATGCCTTGGCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSAPDLPGPVCRPCLLNSVCLA*ECLGCQ Trigger: TTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGA...GTTCAGGAGGCATGGGCGGCACACAGGGCCTGGAAGATCCGGAGCTGAACAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCCTGGAGATGCTGGAGTGATAGCCTTGGCCTTCCCTGGCAAGGACCAGAGAGCCGTTCTCCTCGATaGGCTCCCGGAACCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPWRCWSDSLGLPWQGPESRSPR*APGTYS Trigger: ACTGTAGGTTCCGGGAGCGCATCGAGGAGAACGGCT...CTCTGGTCCTTGCCAGGGAAGGCCAAGGCTATCACTCCAGCATCTCCAGGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAAACTGCCAGTTCTGTGTATCCCCCTGAGCGCTGGCTTCACTTGCAGGGAAGCCGTTCTCCTCGATaGGCTCCCGGAACCGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MQTASSVYPPERWLHLQGSRSPR*APGTDP Trigger: TGGGTCGGTTCCGGGAGCGCATCGAGGAGAACGGCT...TCCCTGCAAGTGAAGCCAGCGCTCAGGGGGATACACAGAACTGGCAGTTTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTGGGGCAGTGCACAGGGTGGGTTGGAGCTTCTGGCAAAGGCCTGATGGAACTGGCAGGAAGTGTGTaGACAGTTGGTGCCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MVGQCTGWVGASGKGLMELAGSV*TVGAVV Trigger: CACGACGGCACCAACTGTCCACACACTTCCTGCCAG...TTCCATCAGGCCTTTGCCAGAAGCTCCAACCCACCCTGTGCACTGCCCCACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| CDS-3UTR GCA 90 bp | CACACGAGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGGCCTTGGCTGTCAAGTaGCAGGAACATGGGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTSASACREQKRESDPLGALAVK*QEHGSA Trigger: GGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGC...CCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACTCGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCCTGCTTTCCTCATCCACCTGGTGTGTGTTCCCACCTCCAAACCTCTCGCAGGAAAAAGTGAGTaGAGGAGAAGAGGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPAFLIHLVCVPTSKPLAGKSE*RRRGGA Trigger: GGCGCCGCCTCTTCTCCTCCACTCACTTTTTCCTGC...GAGAGGTTTGGAGGTGGGAACACACACCAGGTGGATGAGGAAAGCAGGCAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCAAGCTTCGGGCAGGAAAAAGTGAGTaGAGGAGAAGAGGCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPLGRARSALNSSPKLRAGKSE*RRRGGA Trigger: GGCGCCGCCTCTTCTCCTCCACTCACTTTTTCCTGC...CCGAAGCTTGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR CAA 72 bp | AGACGAGACCAAGACTGGCAGGAAGTGTGTGGACAGTaGGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRDQDWQEVCGQ*VPSCPSALPGN Trigger: ATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGACTGGCAGGAAGTGTGTGGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTCTGAGTACACAGCTTTaGTCACCACAGTGCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PRLAGSVWTVGAVVSVCLLSTQL*SPQCPH Trigger: GTGTGGGCACTGTGGTGATCAAAGCTGTGTACTCAG...AAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
||
| CDS-3UTR GCA 90 bp | CCTGATGTGGGAGAACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAATACTGTCCTGGCCGTaGCGCCAACGCGTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PDVGELNSGPLEEQEVLLILSWP*RQRVPC Trigger: GCAGGGGACGCGTTGGCGGCACGGCCAGGACAGTAT...TAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTCTCCCACATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCAAGCTTCGGCCACATGGGCGATGCCTTGCCTGGGAATaGCTTGGCTGTCAAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRARSALNSSPKLRPHGRCLAWE*LGCQVP Trigger: TGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCA...TCGCCCATGTGGCCGAAGCTTGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| 3UTR CAA 72 bp | AGACTGCCGTTCCCTGGAGATGCTGGAGTGATAGCCTaGGCCTTCCCTGGCAAGGACCAGAGCATCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLPFPGDAGVIA*AFPGKDQSIHS Trigger: AGAATGGATGCTCTGGTCCTTGCCAGGGAAGGCCAAGGCTATCACTCCAGCATCTCCAGGGAACGGCAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCAAGCTTCGGCTGAGTACACAGCTTTaGTCACCACAGTGCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPLGRARSALNSSPKLRLSTQL*SPQCPH Trigger: GTGTGGGCACTGTGGTGATCAAAGCTGTGTACTCAG...CCGAAGCTTGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAGTGCCTGCAGAGAACAGAAAAGGGAGTCAGATCCTCTGGGGTGGGAGGGCCCCTGCGATTCATaGCCACATAGAAGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SASACREQKRESDPLGWEGPCDS*PHRSLS Trigger: ACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCC...CTCCCACCCCAGAGGATCTGACTCCCTTTTCTGTTCTCTGCAGGCACTTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGATGTGGGAGAACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCGGCCCCTGCGATTCATaGCCACATAGAAGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPDVGELNSGPLEEQEVLGPCDS*PHRSLS Trigger: ACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCC...GAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTCTCCCACATCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| 3UTR CAA 72 bp | GAGCAGCCTGATGTGGGAGAACTAAACTCAGGCCCCTaGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQPDVGELNSGP*EEQEVLLTPAP Trigger: TGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTCTCCCACATCAGGCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS-3UTR GCA 90 bp | GAACTAAACTCAGGCCCCTTGGAAGAGCAAGAAGTGCTCTTAACTCCAGCCCCACATAGAGGCGGCCCCTaGGATTCATGGCCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQEVLLTPAPHRGGP*DSWPHR Trigger: TCTATGTGGCCATGAATCGCAGGGGCCGCCTCTATG...TGGGGCTGGAGTTAAGAGCACTTCTTGCTCTTCCAAGGGGCCTGAGTTTAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219228.2 ENSMUST00000219981.2 |
||
| CDS TCA 90 bp | CGCGTCCCCTGCACCCGACCACCAAGGTCCACACGCAGGAAAAAGTaGGTGGAGGAGAAGAGGCGGCGCCAGCGCACGTCGCCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVPCTRPPRSTRRKK*VEEKRRRQRTSPSR Trigger: TCTGGAGGGCGACGTGCGCTGGCGCCGCCTCTTCTCCTCCACTCACTTTTTCCTGCGTGTGGACCTTGGTGGTCGGGTGCAGGGGACGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS GCA 90 bp | CCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTTGGCTGTCAAGTaGCAGGAACATGGGTCGGCCGCGGTGCCTCCAACGTCGCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSCPSALPGNALAVK*QEHGSAAVPPTSRG Trigger: GCCTCGCGACGTTGGAGGCACCGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 90 bp | GTGCCCACACGGACAGAACGGATCTCCACTATACTGTCCTGGCCGTaGCGCCAACGCGTCCCCTGCACCCGACCACCAAGGTCCACACGC | + |
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Preference number: 5 (lower is better) Translates to: VPTRTERISTILSWP*RQRVPCTRPPRSTR Trigger: GCGTGTGGACCTTGGTGGTCGGGTGCAGGGGACGCGTTGGCGGCACGGCCAGGACAGTATAGTGGAGATCCGTTCTGTCCGTGTGGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS CCA 90 bp | TCCCCTGCACCCGACCACCAAGGTCCACACGCAGGAAAAAGTGAGTaGAGGAGAAGAGGCGGCGCCAGCGCACGTCGCCCTCCAGATGCG | + |
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Preference number: 5 (lower is better) Translates to: SPAPDHQGPHAGKSE*RRRGGASARRPPDA Trigger: CGCATCTGGAGGGCGACGTGCGCTGGCGCCGCCTCTTCTCCTCCACTCACTTTTTCCTGCGTGTGGACCTTGGTGGTCGGGTGCAGGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS GCA 90 bp | GTGTGGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATaGCTTGGCTGTCAAGTGCCAGGAACATGGGTCGGCCGCGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: VWTVGAVVSVCLAWE*LGCQVPGTWVGRGA Trigger: GGCACCGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS CCA 90 bp | GACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTTaGCTGTCAAGTGCCAGGAACATGGGTCGGCCGCGGTGCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: DSWCRRVRLPCLGMP*LSSARNMGRPRCLQ Trigger: TTGGAGGCACCGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 90 bp | CTCCCGGAACCTACAGTCCACAGAGTAGACCCGCTGCAGGGCGGGTaGGTGAGACTGGCTGTCTGCACCACTGACCATTGCCACCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LPEPTVHRVDPLQGG*VRLAVCTTDHCHPV Trigger: TACTGGGTGGCAATGGTCAGTGGTGCAGACAGCCAGTCTCACGCACCCGCCCTGCAGCGGGTCTACTCTGTGGACTGTAGGTTCCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020577.4 |
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| CDS GCA 90 bp | GCCTCCAACGTCGCGAGGCGTATGTGTTGTAGCCGTTCTCCTCGATaGGCTCCCGGAACCTACAGTCCACAGAGTAGACCCGCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ASNVARRMCCSRSPR*APGTYSPQSRPAAG Trigger: CCCTGCAGCGGGTCTACTCTGTGGACTGTAGGTTCCGGGAGCGCATCGAGGAGAACGGCTACAACACATACGCCTCGCGACGTTGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020577.4 |
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| CDS CCA 90 bp | GGAAGTGTGTGGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCCTaGGAATGCCTTGGCTGTCAAGTGCCAGGAACATGGGTCGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GSVWTVGAVVSVCLA*ECLGCQVPGTWVGR Trigger: GCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 90 bp | GCCTCCAACGTCGCGAGGCGTATGTGTTGTAGCCGTTCTCCTCGATaGGCTCCCGGAACCTACAGTCCACAGAGTAGACCCGCGACCCAT | + |
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Preference number: 5 (lower is better) Translates to: ASNVARRMCCSRSPR*APGTYSPQSRPATH Trigger: ATGGGTCGCGGGTCTACTCTGTGGACTGTAGGTTCCGGGAGCGCATCGAGGAGAACGGCTACAACACATACGCCTCGCGACGTTGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| CDS GCA 90 bp | AGACTGGCAGGAAGTGTGTGGACAGTTGGTGCCGTCGTGTCCGTCTaGCTTGCCTGGGAATGCCTTGGCTGTCAAGTGCCAGGAACATGG | + |
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Preference number: 5 (lower is better) Translates to: RLAGSVWTVGAVVSV*LAWECLGCQVPGTW Trigger: CCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS TCA 90 bp | CGACCCATAGAGGCGGCCCCTGCGATTCATGGCCACATAGAAGCCTaGGTACACAGCTTTGATCACCACAGTGCCCACACGGACAGAACG | + |
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Preference number: 5 (lower is better) Translates to: RPIEAAPAIHGHIEA*VHSFDHHSAHTDRT Trigger: CGTTCTGTCCGTGTGGGCACTGTGGTGATCAAAGCTGTGTACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCCGCCTCTATGGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS GCA 90 bp | CTTCAAGACGAGACCAAGACTGGCAGGAAGTGTGTGGACAGTTGGTaGCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTTGGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LQDETKTGRKCVDSW*RRVRLPCLGMPWLS Trigger: TGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCAGTCTTGGTCTCGTCTTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020577.4 |
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| CDS TCA 90 bp | GGCCCCTGCGATTCATGGCCACATAGAAGCCTGAGTACACAGCTTTaGTCACCACAGTGCCCACACGGACAGAACGGATCTCCACTATAC | + |
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Preference number: 5 (lower is better) Translates to: GPCDSWPHRSLSTQL*SPQCPHGQNGSPLY Trigger: GTATAGTGGAGATCCGTTCTGTCCGTGTGGGCACTGTGGTGATCAAAGCTGTGTACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS CCA 72 bp | GCCTGGGAATGCCTTGGCTGTCAAGTGCCAGGAACATaGGTCGGCCGCGGTGCCTCCAACGTCGCGAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: AWECLGCQVPGT*VGRGASNVARR Trigger: ACGCCTCGCGACGTTGGAGGCACCGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 72 bp | CGGACAGAACGGATCTCCACTATACTGTCCTGGCCGTaGCGCCAACGCGTCCCCTGCACCCGACCACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: RTERISTILSWP*RQRVPCTRPPR Trigger: CCTTGGTGGTCGGGTGCAGGGGACGCGTTGGCGGCACGGCCAGGACAGTATAGTGGAGATCCGTTCTGTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS CCA 72 bp | TGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTTaGCTGTCAAGTGCCAGGAACATGGGTCGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: CRRVRLPCLGMP*LSSARNMGRPR Trigger: CCGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS CAA 72 bp | GTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTaGGCTGTCAAGTGCCAGGAACATGGGTCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: VPSCPSALPGNA*AVKCQEHGSAA Trigger: CGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS CAA 90 bp | GGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCCTGGGAATGCCTaGGCTGTCAAGTGCCAGGAACATGGGTCGGCCGCGGTGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GQLVPSCPSALPGNA*AVKCQEHGSAAVPP Trigger: TGGAGGCACCGCGGCCGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS TCA 72 bp | TGCACCCGACCACCAAGGTCCACACGCAGGAAAAAGTaGGTGGAGGAGAAGAGGCGGCGCCAGCGCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: CTRPPRSTRRKK*VEEKRRRQRTS Trigger: CGACGTGCGCTGGCGCCGCCTCTTCTCCTCCACTCACTTTTTCCTGCGTGTGGACCTTGGTGGTCGGGTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS GCA 72 bp | ACTATACTGTCCTGGCCGTGCCGCCAACGCGTCCCCTaGACCCGACCACCAAGGTCCACACGCAGGAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: TILSWPCRQRVP*TRPPRSTRRKK Trigger: CTTTTTCCTGCGTGTGGACCTTGGTGGTCGGGTGCAGGGGACGCGTTGGCGGCACGGCCAGGACAGTATAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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| CDS GCA 72 bp | GATGCGCTCCCGGAACCGACCCATAGAGGCGGCCCCTaGGATTCATGGCCACATAGAAGCCTGAGTACACAG | + |
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Preference number: 6 (lower is better) Translates to: DALPEPTHRGGP*DSWPHRSLSTQ Trigger: CTGTGTACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCCGCCTCTATGGGTCGGTTCCGGGAGCGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219981.2 |
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| CDS CAA 90 bp | TGGCAGGAAGTGTGTGGACAGTTGGTGCCGTCGTGTCCGTCTGCCTaGCCTGGGAATGCCTTGGCTGTCAAGTGCCAGGAACATGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: WQEVCGQLVPSCPSA*PGNALAVKCQEHGS Trigger: CGACCCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 72 bp | ACCGCCAGTCACTCACCGACCCATAGAGGCGGCCCCTaGGATTCATGGCCACATAGAAGCCTGAGTACACAG | + |
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Preference number: 6 (lower is better) Translates to: TASHSPTHRGGP*DSWPHRSLSTQ Trigger: CTGTGTACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCCGCCTCTATGGGTCGGTGAGTGACTGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020577.4 |
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| CDS GCA 72 bp | GTCGCGAGGCGTATGTGTTGTAGCCGTTCTCCTCGATaGGCTCCCGGAACCTACAGTCCACAGAGTAGACCC | + |
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Preference number: 6 (lower is better) Translates to: VARRMCCSRSPR*APGTYSPQSRP Trigger: GGGTCTACTCTGTGGACTGTAGGTTCCGGGAGCGCATCGAGGAGAACGGCTACAACACATACGCCTCGCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 72 bp | GGAAGTGTGTGGACAGTTGGTGCCGTCGTGTCCGTCTaGCTTGCCTGGGAATGCCTTGGCTGTCAAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSVWTVGAVVSV*LAWECLGCQVP Trigger: TGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCACACACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS GCA 72 bp | CCACAGAGTAGACCCGCGACCCATAGAGGCGGCCCCTaGGATTCATGGCCACATAGAAGCCTGAGTACACAG | + |
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Preference number: 6 (lower is better) Translates to: PQSRPATHRGGP*DSWPHRSLSTQ Trigger: CTGTGTACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCCGCCTCTATGGGTCGCGGGTCTACTCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219228.2 |
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| CDS CCA 72 bp | TGGACAGTTGGTGCCGTCGTGTCCGTCTGCCTTGCCTaGGAATGCCTTGGCTGTCAAGTGCCAGGAACATGG | + |
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Preference number: 6 (lower is better) Translates to: WTVGAVVSVCLA*ECLGCQVPGTW Trigger: CCATGTTCCTGGCACTTGACAGCCAAGGCATTCCCAGGCAAGGCAGACGGACACGACGGCACCAACTGTCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 |
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| CDS TCA 72 bp | GAGGCGGCCCCTGCGATTCATGGCCACATAGAAGCCTaGGTACACAGCTTTGATCACCACAGTGCCCACACG | + |
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Preference number: 6 (lower is better) Translates to: EAAPAIHGHIEA*VHSFDHHSAHT Trigger: CGTGTGGGCACTGTGGTGATCAAAGCTGTGTACTCAGGCTTCTATGTGGCCATGAATCGCAGGGGCCGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020577.4 ENSMUST00000219228.2 ENSMUST00000219981.2 |
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